3X2NA

Proton relay pathway in inverting cellulase
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
total genus 49
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2nA00
4FERA 2PJJA 5H4UA 1HD5A 3X2MA 1L8FA 3X2KA 4JP6A 3ENGA 4FFTA 2BH0A 3SUJA 4JS7A 3SUMA 1BW3A 3D30A 1OA9A 4JCWA 3X2GA 2ENGA 3X2IA 2G6GA 3X2HA 3X2NA 3X2LA 3CZBA 4ZM7A 3X2OA 2PICA 4JP7A 1OA7A 3M3GA 1WC2A 4FG4A 3X2PA 4ENGA 3SULA 4FG2A 2PNWA 5GLYA 3X2JA 2AE0X 1BW4A 2G5DA 4AVRA 4L48A 2PI8A 5GM9A 2HCZX 4JJOA 1N10A 5GLXA 3SUKA 2KQAA 2GAEA
chains in the Genus database with same CATH superfamily
4FERA 1TMOA 3QQ8A 3GTQA 1E18A 3O5AA 3OUGA 5T5MD 1OA9A 3GTPA 4GA5A 2PJHB 1TWGA 1YNND 1PT0A 4KLNA 4AAYA 5C1BA 1PYUB 3HKZA 2R92A 3CZBA 1TWCA 1E5VA 2PICA 1IW7D 3TM7B 3H0GA 2R93A 1SFOA 1R9TA 2PNWA 2V45A 3X2JA 2AE0X 4AVRA 2IV2X 2V3VA 5GM9A 2A68D 1R7RA 2BE5D 1DMRA 1YNJD 2E2IA 2VPWA 1CZ5A 2JIOA 1L8FA 1KQFA 1YLEA 3ENGA 4FFTA 1G8JA 2NVXA 1TWFA 1DMSA 4JS7A 5FTMA 3D30A 1FDOA 2JA6A 5C18A 1Y4ZA 3X2GA 4CS0A 3GTKA 2G6GA 2YU9A 3GTOA 1Q16A 1I3QA 3X2NA 4ZM7A 1G8KA 2JIQA 4JP7A 1SIWA 5DYIA 4NOHA 3DMRA 2VPYA 2VPXA 3QC8A 4ENGA 3IR7A 2O5JD 4RV0A 1FDIA 2YUJA 1PQHA 2PMZA 4CRZA 5DYGA 3TIWA 5B6CA 1BW4A 2DMRA 2PI8A 2JA5A 4D7ZB 5FTLA 2HCZX 2R7ZA 1EU1A 2B63A 4KO8A 1H5NA 5GLFA 5EPPA 3GTLA 2BH0A 5FTNA 5H4UA 1H0HA 1PYQA 1AW8B 2A6ED 4KODA 3X2KA 4JP6A 2A69D 4C2MA 1ZC1A 2JA7A 3IR6A 3SUJA 3FKIA 4AONB 2WB1A 1CZ4A 5FTJA 4JCWA 1CR5A 2ENGA 2VUMA 4AOKB 2JIRA 1OGYA 2EEOB 1WCMA 3X2HA 1UHEA 1Y1WA 3HU3A 1WC2A 4GA6A 3PLXB 1K83A 1QDNA 1S3SA 4FG2A 3GTMA 5GLYA 4QIWA 1PT1A 1TWAA 1E60A 4L48A 3QWZA 4JJOA 2CW0D 3CQZA 4CRYG 2KQAA 1SMYD 2PJJA 1HD5A 4AZDA 1PPYA 5FTKA 4KDLA 3X2MA 2VPZA 1E32A 3SUMA 3QQ7A 1BW3A 2C45A 1WLFA 1R27A 3X2IA 2Y0SA 1TWHA 2E7ZA 2NVYA 2E2HA 3X2LA 3X2OA 1OA7A 3HU1A 3M3GA 4FG4A 1Y5IA 4KDIA 3X2PA 2JIMA 2KI8A 1Y1VA 3ML1A 1ZYRD 3SULA 3GTGA 2JIPA 2NYAA 2A6HD 3HU2A 1PQEA 1E61A 1VC3B 2G5DA 1KQGA 3IR5A 2NAPA 1QCSA 2WAQA 4AYBA 4DMRA 1PQFA 3CF2A 1AA6A 1N10A 1I50A 5GLXA 3SUKA 1UHDA 3GTJA 2GAEA 5T5ID
chains in the Genus database with same CATH topology
4FERA 2PJJA 5H4UA 1HD5A 3X2MA 1L8FA 3X2KA 4JP6A 3ENGA 4FFTA 2BH0A 3SUJA 4JS7A 3SUMA 1BW3A 3D30A 1OA9A 4JCWA 3X2GA 2ENGA 3X2IA 2G6GA 3X2HA 3X2NA 3X2LA 3CZBA 4ZM7A 3X2OA 2PICA 4JP7A 1OA7A 3M3GA 1WC2A 4FG4A 3X2PA 4ENGA 3SULA 4FG2A 2PNWA 5GLYA 3X2JA 2AE0X 1BW4A 2G5DA 4AVRA 4L48A 2PI8A 5GM9A 2HCZX 4JJOA 1N10A 5GLXA 3SUKA 2KQAA 2GAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FER A;  2PJJ A;  5H4U A;  1HD5 A;  3X2M A;  1L8F A;  3X2K A;  4JP6 A;  3ENG A;  4FFT A;  2BH0 A;  3SUJ A;  4JS7 A;  3SUM A;  1BW3 A;  3D30 A;  1OA9 A;  4JCW A;  3X2G A;  2ENG A;  3X2I A;  2G6G A;  3X2H A;  3X2N A;  3X2L A;  3CZB A;  4ZM7 A;  3X2O A;  2PIC A;  4JP7 A;  1OA7 A;  3M3G A;  1WC2 A;  4FG4 A;  3X2P A;  4ENG A;  3SUL A;  4FG2 A;  2PNW A;  5GLY A;  3X2J A;  2AE0 X;  1BW4 A;  2G5D A;  4AVR A;  4L48 A;  2PI8 A;  5GM9 A;  2HCZ X;  4JJO A;  1N10 A;  5GLX A;  3SUK A;  2KQA A;  2GAE A; 
#chains in the Genus database with same CATH topology
 4FER A;  1TMO A;  3QQ8 A;  3GTQ A;  1E18 A;  3O5A A;  3OUG A;  5T5M D;  1OA9 A;  3GTP A;  4GA5 A;  2PJH B;  1TWG A;  1YNN D;  1PT0 A;  4KLN A;  4AAY A;  5C1B A;  1PYU B;  3HKZ A;  2R92 A;  3CZB A;  1TWC A;  1E5V A;  2PIC A;  1IW7 D;  3TM7 B;  3H0G A;  2R93 A;  1SFO A;  1R9T A;  2PNW A;  2V45 A;  3X2J A;  2AE0 X;  4AVR A;  2IV2 X;  2V3V A;  5GM9 A;  2A68 D;  1R7R A;  2BE5 D;  1DMR A;  1YNJ D;  2E2I A;  2VPW A;  1CZ5 A;  2JIO A;  1L8F A;  1KQF A;  1YLE A;  3ENG A;  4FFT A;  1G8J A;  2NVX A;  1TWF A;  1DMS A;  4JS7 A;  5FTM A;  3D30 A;  1FDO A;  2JA6 A;  5C18 A;  1Y4Z A;  3X2G A;  4CS0 A;  3GTK A;  2G6G A;  2YU9 A;  3GTO A;  1Q16 A;  1I3Q A;  3X2N A;  4ZM7 A;  1G8K A;  2JIQ A;  4JP7 A;  1SIW A;  5DYI A;  4NOH A;  3DMR A;  2VPY A;  2VPX A;  3QC8 A;  4ENG A;  3IR7 A;  2O5J D;  4RV0 A;  1FDI A;  2YUJ A;  1PQH A;  2PMZ A;  4CRZ A;  5DYG A;  3TIW A;  5B6C A;  1BW4 A;  2DMR A;  2PI8 A;  2JA5 A;  4D7Z B;  5FTL A;  2HCZ X;  2R7Z A;  1EU1 A;  2B63 A;  4KO8 A;  1H5N A;  5GLF A;  5EPP A;  3GTL A;  2BH0 A;  5FTN A;  5H4U A;  1H0H A;  1PYQ A;  1AW8 B;  2A6E D;  4KOD A;  3X2K A;  4JP6 A;  2A69 D;  4C2M A;  1ZC1 A;  2JA7 A;  3IR6 A;  3SUJ A;  3FKI A;  4AON B;  2WB1 A;  1CZ4 A;  5FTJ A;  4JCW A;  1CR5 A;  2ENG A;  2VUM A;  4AOK B;  2JIR A;  1OGY A;  2EEO B;  1WCM A;  3X2H A;  1UHE A;  1Y1W A;  3HU3 A;  1WC2 A;  4GA6 A;  3PLX B;  1K83 A;  1QDN A;  1S3S A;  4FG2 A;  3GTM A;  5GLY A;  4QIW A;  1PT1 A;  1TWA A;  1E60 A;  4L48 A;  3QWZ A;  4JJO A;  2CW0 D;  3CQZ A;  4CRY G;  2KQA A;  1SMY D;  2PJJ A;  1HD5 A;  4AZD A;  1PPY A;  5FTK A;  4KDL A;  3X2M A;  2VPZ A;  1E32 A;  3SUM A;  3QQ7 A;  1BW3 A;  2C45 A;  1WLF A;  1R27 A;  3X2I A;  2Y0S A;  1TWH A;  2E7Z A;  2NVY A;  2E2H A;  3X2L A;  3X2O A;  1OA7 A;  3HU1 A;  3M3G A;  4FG4 A;  1Y5I A;  4KDI A;  3X2P A;  2JIM A;  2KI8 A;  1Y1V A;  3ML1 A;  1ZYR D;  3SUL A;  3GTG A;  2JIP A;  2NYA A;  2A6H D;  3HU2 A;  1PQE A;  1E61 A;  1VC3 B;  2G5D A;  1KQG A;  3IR5 A;  2NAP A;  1QCS A;  2WAQ A;  4AYB A;  4DMR A;  1PQF A;  3CF2 A;  1AA6 A;  1N10 A;  1I50 A;  5GLX A;  3SUK A;  1UHD A;  3GTJ A;  2GAE A;  5T5I D; 
#chains in the Genus database with same CATH homology
 4FER A;  2PJJ A;  5H4U A;  1HD5 A;  3X2M A;  1L8F A;  3X2K A;  4JP6 A;  3ENG A;  4FFT A;  2BH0 A;  3SUJ A;  4JS7 A;  3SUM A;  1BW3 A;  3D30 A;  1OA9 A;  4JCW A;  3X2G A;  2ENG A;  3X2I A;  2G6G A;  3X2H A;  3X2N A;  3X2L A;  3CZB A;  4ZM7 A;  3X2O A;  2PIC A;  4JP7 A;  1OA7 A;  3M3G A;  1WC2 A;  4FG4 A;  3X2P A;  4ENG A;  3SUL A;  4FG2 A;  2PNW A;  5GLY A;  3X2J A;  2AE0 X;  1BW4 A;  2G5D A;  4AVR A;  4L48 A;  2PI8 A;  5GM9 A;  2HCZ X;  4JJO A;  1N10 A;  5GLX A;  3SUK A;  2KQA A;  2GAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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