3X2PA

Neutron and x-ray joint refined structure of pccel45a with cellopentaose at 298k.
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
180
structure length
179
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 50
structure length 179
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2pA00
5GLXA 3X2PA 1BW4A 3X2IA 3X2GA 3CZBA 2ENGA 5GM9A 3SUMA 3SUJA 3X2KA 1WC2A 4JCWA 3X2MA 3SULA 4JP7A 4L48A 2AE0X 1N10A 4JJOA 2KQAA 3ENGA 3X2NA 2PICA 3X2JA 4FG4A 5GLYA 2PJJA 4FG2A 3SUKA 3X2HA 1HD5A 4ZM7A 3M3GA 2HCZX 2PNWA 4FERA 4FFTA 2G6GA 1OA7A 2GAEA 1OA9A 3X2OA 2PI8A 4AVRA 4JP6A 3D30A 2G5DA 3X2LA 4JS7A 1BW3A 2BH0A 1L8FA 5H4UA 4ENGA
chains in the Genus database with same CATH superfamily
5FTNA 1AA6A 4CRYG 2JA6A 5C1BA 3O5AA 2E2HA 2R7ZA 3X2KA 1Y5IA 4GA5A 4JCWA 2EEOB 2O5JD 3GTLA 4JJOA 2KQAA 3X2NA 2PICA 4KDIA 3GTPA 1E5VA 1VC3B 3PLXB 1R7RA 3QC8A 1OGYA 2VPZA 1YNJD 2PJHB 3GTQA 4ZM7A 2JIPA 3M3GA 3QQ8A 3CF2A 2HCZX 3DMRA 5DYIA 2V3VA 3ML1A 4AOKB 1Y1VA 3H0GA 2GAEA 4AAYA 3HU3A 1SMYD 2JA7A 2DMRA 3IR7A 4JP6A 2A68D 2NVXA 2JIOA 2JIQA 3X2LA 2VUMA 4CRZA 1PQEA 1CZ5A 1Q16A 3HU2A 3X2GA 1AW8B 2V45A 4RV0A 2CW0D 5T5ID 1E32A 2R93A 2NVYA 5FTMA 3GTGA 1PT1A 1PYQA 4JP7A 5FTKA 4GA6A 1DMRA 2A6ED 1PT0A 2R92A 2Y0SA 3QWZA 2YU9A 4C2MA 3IR6A 1S3SA 1QCSA 5FTJA 1SFOA 3X2HA 2JIRA 4AYBA 3QQ7A 2VPYA 1OA7A 4AZDA 1TWHA 3X2OA 4AONB 3HU1A 1CZ4A 2NYAA 1YLEA 1SIWA 5C18A 3TIWA 1BW3A 2BH0A 1E61A 2KI8A 1DMSA 1ZYRD 1I50A 4ENGA 1R9TA 3CQZA 3GTOA 4KODA 1TWFA 1BW4A 3CZBA 2ENGA 4NOHA 2PMZA 2VPXA 1E60A 5GM9A 3SUJA 1YNND 1QDNA 1KQFA 3SULA 1IW7D 2JA5A 2A69D 1TMOA 2A6HD 3X2JA 4FG4A 1R27A 1UHEA 1G8KA 2IV2X 2PJJA 4FG2A 4KLNA 1Y1WA 1H0HA 4D7ZB 4FFTA 2G6GA 2NAPA 4QIWA 1OA9A 2JIMA 3GTJA 2PI8A 1TWGA 4AVRA 1UHDA 5GLFA 5EPPA 2G5DA 4JS7A 1CR5A 1FDIA 1G8JA 1PPYA 1K83A 3GTMA 1FDOA 1L8FA 3FKIA 3OUGA 4KO8A 5B6CA 5GLXA 3X2PA 1I3QA 3X2IA 3GTKA 5FTLA 4KDLA 3SUMA 2WB1A 1PQHA 3HKZA 1WC2A 1TWCA 1EU1A 3X2MA 4L48A 2AE0X 1N10A 5DYGA 3ENGA 4DMRA 3IR5A 2E2IA 1PQFA 2BE5D 2C45A 5GLYA 2B63A 1KQGA 1ZC1A 3SUKA 2WAQA 1HD5A 2E7ZA 1TWAA 1WCMA 2PNWA 4FERA 1PYUB 3TM7B 1WLFA 3D30A 4CS0A 1E18A 2VPWA 1H5NA 2YUJA 5T5MD 1Y4ZA 5H4UA
chains in the Genus database with same CATH topology
5GLXA 3X2PA 1BW4A 3X2IA 3X2GA 3CZBA 2ENGA 5GM9A 3SUMA 3SUJA 3X2KA 1WC2A 4JCWA 3X2MA 3SULA 4JP7A 4L48A 2AE0X 1N10A 4JJOA 2KQAA 3ENGA 3X2NA 2PICA 3X2JA 4FG4A 5GLYA 2PJJA 4FG2A 3SUKA 3X2HA 1HD5A 4ZM7A 3M3GA 2HCZX 2PNWA 4FERA 4FFTA 2G6GA 1OA7A 2GAEA 1OA9A 3X2OA 2PI8A 4AVRA 4JP6A 3D30A 2G5DA 3X2LA 4JS7A 1BW3A 2BH0A 1L8FA 5H4UA 4ENGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5GLX A;  3X2P A;  1BW4 A;  3X2I A;  3X2G A;  3CZB A;  2ENG A;  5GM9 A;  3SUM A;  3SUJ A;  3X2K A;  1WC2 A;  4JCW A;  3X2M A;  3SUL A;  4JP7 A;  4L48 A;  2AE0 X;  1N10 A;  4JJO A;  2KQA A;  3ENG A;  3X2N A;  2PIC A;  3X2J A;  4FG4 A;  5GLY A;  2PJJ A;  4FG2 A;  3SUK A;  3X2H A;  1HD5 A;  4ZM7 A;  3M3G A;  2HCZ X;  2PNW A;  4FER A;  4FFT A;  2G6G A;  1OA7 A;  2GAE A;  1OA9 A;  3X2O A;  2PI8 A;  4AVR A;  4JP6 A;  3D30 A;  2G5D A;  3X2L A;  4JS7 A;  1BW3 A;  2BH0 A;  1L8F A;  5H4U A;  4ENG A; 
#chains in the Genus database with same CATH topology
 5FTN A;  1AA6 A;  4CRY G;  2JA6 A;  5C1B A;  3O5A A;  2E2H A;  2R7Z A;  3X2K A;  1Y5I A;  4GA5 A;  4JCW A;  2EEO B;  2O5J D;  3GTL A;  4JJO A;  2KQA A;  3X2N A;  2PIC A;  4KDI A;  3GTP A;  1E5V A;  1VC3 B;  3PLX B;  1R7R A;  3QC8 A;  1OGY A;  2VPZ A;  1YNJ D;  2PJH B;  3GTQ A;  4ZM7 A;  2JIP A;  3M3G A;  3QQ8 A;  3CF2 A;  2HCZ X;  3DMR A;  5DYI A;  2V3V A;  3ML1 A;  4AOK B;  1Y1V A;  3H0G A;  2GAE A;  4AAY A;  3HU3 A;  1SMY D;  2JA7 A;  2DMR A;  3IR7 A;  4JP6 A;  2A68 D;  2NVX A;  2JIO A;  2JIQ A;  3X2L A;  2VUM A;  4CRZ A;  1PQE A;  1CZ5 A;  1Q16 A;  3HU2 A;  3X2G A;  1AW8 B;  2V45 A;  4RV0 A;  2CW0 D;  5T5I D;  1E32 A;  2R93 A;  2NVY A;  5FTM A;  3GTG A;  1PT1 A;  1PYQ A;  4JP7 A;  5FTK A;  4GA6 A;  1DMR A;  2A6E D;  1PT0 A;  2R92 A;  2Y0S A;  3QWZ A;  2YU9 A;  4C2M A;  3IR6 A;  1S3S A;  1QCS A;  5FTJ A;  1SFO A;  3X2H A;  2JIR A;  4AYB A;  3QQ7 A;  2VPY A;  1OA7 A;  4AZD A;  1TWH A;  3X2O A;  4AON B;  3HU1 A;  1CZ4 A;  2NYA A;  1YLE A;  1SIW A;  5C18 A;  3TIW A;  1BW3 A;  2BH0 A;  1E61 A;  2KI8 A;  1DMS A;  1ZYR D;  1I50 A;  4ENG A;  1R9T A;  3CQZ A;  3GTO A;  4KOD A;  1TWF A;  1BW4 A;  3CZB A;  2ENG A;  4NOH A;  2PMZ A;  2VPX A;  1E60 A;  5GM9 A;  3SUJ A;  1YNN D;  1QDN A;  1KQF A;  3SUL A;  1IW7 D;  2JA5 A;  2A69 D;  1TMO A;  2A6H D;  3X2J A;  4FG4 A;  1R27 A;  1UHE A;  1G8K A;  2IV2 X;  2PJJ A;  4FG2 A;  4KLN A;  1Y1W A;  1H0H A;  4D7Z B;  4FFT A;  2G6G A;  2NAP A;  4QIW A;  1OA9 A;  2JIM A;  3GTJ A;  2PI8 A;  1TWG A;  4AVR A;  1UHD A;  5GLF A;  5EPP A;  2G5D A;  4JS7 A;  1CR5 A;  1FDI A;  1G8J A;  1PPY A;  1K83 A;  3GTM A;  1FDO A;  1L8F A;  3FKI A;  3OUG A;  4KO8 A;  5B6C A;  5GLX A;  3X2P A;  1I3Q A;  3X2I A;  3GTK A;  5FTL A;  4KDL A;  3SUM A;  2WB1 A;  1PQH A;  3HKZ A;  1WC2 A;  1TWC A;  1EU1 A;  3X2M A;  4L48 A;  2AE0 X;  1N10 A;  5DYG A;  3ENG A;  4DMR A;  3IR5 A;  2E2I A;  1PQF A;  2BE5 D;  2C45 A;  5GLY A;  2B63 A;  1KQG A;  1ZC1 A;  3SUK A;  2WAQ A;  1HD5 A;  2E7Z A;  1TWA A;  1WCM A;  2PNW A;  4FER A;  1PYU B;  3TM7 B;  1WLF A;  3D30 A;  4CS0 A;  1E18 A;  2VPW A;  1H5N A;  2YUJ A;  5T5M D;  1Y4Z A;  5H4U A; 
#chains in the Genus database with same CATH homology
 5GLX A;  3X2P A;  1BW4 A;  3X2I A;  3X2G A;  3CZB A;  2ENG A;  5GM9 A;  3SUM A;  3SUJ A;  3X2K A;  1WC2 A;  4JCW A;  3X2M A;  3SUL A;  4JP7 A;  4L48 A;  2AE0 X;  1N10 A;  4JJO A;  2KQA A;  3ENG A;  3X2N A;  2PIC A;  3X2J A;  4FG4 A;  5GLY A;  2PJJ A;  4FG2 A;  3SUK A;  3X2H A;  1HD5 A;  4ZM7 A;  3M3G A;  2HCZ X;  2PNW A;  4FER A;  4FFT A;  2G6G A;  1OA7 A;  2GAE A;  1OA9 A;  3X2O A;  2PI8 A;  4AVR A;  4JP6 A;  3D30 A;  2G5D A;  3X2L A;  4JS7 A;  1BW3 A;  2BH0 A;  1L8F A;  5H4U A;  4ENG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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