3X2PA

Neutron and x-ray joint refined structure of pccel45a with cellopentaose at 298k.
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
180
structure length
179
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
total genus 50
structure length 179
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2pA00
1N10A 4FFTA 5GLYA 2BH0A 3X2KA 4ENGA 1OA9A 4JS7A 3SULA 3X2LA 4JCWA 3X2HA 5GLXA 4L48A 4AVRA 2ENGA 3X2IA 3ENGA 3SUJA 4ZM7A 2PI8A 3X2MA 4JP6A 1L8FA 2PICA 3D30A 3X2PA 5GM9A 2G6GA 2AE0X 2KQAA 1HD5A 4JJOA 1OA7A 2HCZX 2GAEA 3SUMA 1BW4A 3X2JA 3SUKA 2G5DA 4FERA 4FG2A 4JP7A 3X2GA 5H4UA 3X2OA 2PJJA 2PNWA 1BW3A 4FG4A 1WC2A 3CZBA 3X2NA 3M3GA
chains in the Genus database with same CATH superfamily
1E5VA 3GTMA 1WCMA 1TMOA 1N10A 2VPYA 2NVYA 3IR5A 4KDLA 5DYGA 1I3QA 4JS7A 3SULA 1OGYA 1E60A 1PYUB 2JIRA 2NAPA 1WLFA 3DMRA 1PQEA 1SMYD 5EPPA 5FTNA 2ENGA 4AVRA 4CS0A 2JIPA 1Q16A 4GA6A 1ZC1A 2B63A 1G8JA 2PI8A 3FKIA 1I50A 1L8FA 4CRZA 2KQAA 1HD5A 3CQZA 2VPZA 5FTMA 1OA7A 2HCZX 1FDIA 1QDNA 2JIMA 2WB1A 3SUMA 5FTJA 2G5DA 4KO8A 2KI8A 5B6CA 2YUJA 4AAYA 4D7ZB 2IV2X 1E32A 1TWCA 1E61A 2JIOA 3HKZA 4FFTA 5T5MD 2BH0A 3OUGA 5T5ID 4AYBA 2R93A 2O5JD 1CR5A 3GTOA 2E2HA 2JA6A 2E2IA 1TWFA 3X2IA 1TWAA 3ENGA 4ZM7A 3GTQA 1UHEA 1DMRA 3GTLA 4KODA 2PMZA 2PICA 2A6ED 2Y0SA 1PPYA 3X2PA 2YU9A 5C1BA 3O5AA 3GTGA 2C45A 2DMRA 2GAEA 3GTPA 4FERA 1Y5IA 2PNWA 1QCSA 1S3SA 3CZBA 3IR7A 4AZDA 4DMRA 3PLXB 3QQ7A 1DMSA 5GLYA 1YNND 2NYAA 1FDOA 2VPWA 1OA9A 5DYIA 2V45A 4AOKB 5FTLA 1SFOA 3IR6A 1AA6A 1K83A 1PQHA 2JIQA 2A6HD 4RV0A 2JA5A 1PQFA 4GA5A 3D30A 2VUMA 2G6GA 2JA7A 2AE0X 1AW8B 1CZ5A 1IW7D 4KLNA 5C18A 3HU1A 3QC8A 1BW4A 4C2MA 4AONB 3X2JA 3SUKA 4CRYG 4JP7A 2R7ZA 3QQ8A 1PYQA 3X2GA 5H4UA 1Y1WA 1R27A 2WAQA 1YLEA 5FTKA 3TIWA 3ML1A 2NVXA 3X2NA 1TWGA 1VC3B 1ZYRD 1CZ4A 3QWZA 3X2KA 1PT0A 4NOHA 4ENGA 1R7RA 3HU2A 3X2LA 4KDIA 1KQGA 3CF2A 3H0GA 4JCWA 3M3GA 2V3VA 3X2HA 5GLXA 4L48A 3TM7B 2A68D 3GTJA 1UHDA 3SUJA 1Y1VA 3GTKA 5GLFA 3X2MA 4JP6A 1EU1A 1R9TA 2BE5D 5GM9A 1E18A 2CW0D 2PJHB 4JJOA 1H0HA 2VPXA 2A69D 1TWHA 2E7ZA 2R92A 4FG2A 1YNJD 1PT1A 3HU3A 1SIWA 3X2OA 2PJJA 1BW3A 4FG4A 1WC2A 1G8KA 4QIWA 1H5NA 1Y4ZA 2EEOB 1KQFA
chains in the Genus database with same CATH topology
1N10A 4FFTA 5GLYA 2BH0A 3X2KA 4ENGA 1OA9A 4JS7A 3SULA 3X2LA 4JCWA 3X2HA 5GLXA 4L48A 4AVRA 2ENGA 3X2IA 3ENGA 3SUJA 4ZM7A 2PI8A 3X2MA 4JP6A 1L8FA 2PICA 3D30A 3X2PA 5GM9A 2G6GA 2AE0X 2KQAA 1HD5A 4JJOA 1OA7A 2HCZX 2GAEA 3SUMA 1BW4A 3X2JA 3SUKA 2G5DA 4FERA 4FG2A 4JP7A 3X2GA 5H4UA 3X2OA 2PJJA 2PNWA 1BW3A 4FG4A 1WC2A 3CZBA 3X2NA 3M3GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1N10 A;  4FFT A;  5GLY A;  2BH0 A;  3X2K A;  4ENG A;  1OA9 A;  4JS7 A;  3SUL A;  3X2L A;  4JCW A;  3X2H A;  5GLX A;  4L48 A;  4AVR A;  2ENG A;  3X2I A;  3ENG A;  3SUJ A;  4ZM7 A;  2PI8 A;  3X2M A;  4JP6 A;  1L8F A;  2PIC A;  3D30 A;  3X2P A;  5GM9 A;  2G6G A;  2AE0 X;  2KQA A;  1HD5 A;  4JJO A;  1OA7 A;  2HCZ X;  2GAE A;  3SUM A;  1BW4 A;  3X2J A;  3SUK A;  2G5D A;  4FER A;  4FG2 A;  4JP7 A;  3X2G A;  5H4U A;  3X2O A;  2PJJ A;  2PNW A;  1BW3 A;  4FG4 A;  1WC2 A;  3CZB A;  3X2N A;  3M3G A; 
#chains in the Genus database with same CATH topology
 1E5V A;  3GTM A;  1WCM A;  1TMO A;  1N10 A;  2VPY A;  2NVY A;  3IR5 A;  4KDL A;  5DYG A;  1I3Q A;  4JS7 A;  3SUL A;  1OGY A;  1E60 A;  1PYU B;  2JIR A;  2NAP A;  1WLF A;  3DMR A;  1PQE A;  1SMY D;  5EPP A;  5FTN A;  2ENG A;  4AVR A;  4CS0 A;  2JIP A;  1Q16 A;  4GA6 A;  1ZC1 A;  2B63 A;  1G8J A;  2PI8 A;  3FKI A;  1I50 A;  1L8F A;  4CRZ A;  2KQA A;  1HD5 A;  3CQZ A;  2VPZ A;  5FTM A;  1OA7 A;  2HCZ X;  1FDI A;  1QDN A;  2JIM A;  2WB1 A;  3SUM A;  5FTJ A;  2G5D A;  4KO8 A;  2KI8 A;  5B6C A;  2YUJ A;  4AAY A;  4D7Z B;  2IV2 X;  1E32 A;  1TWC A;  1E61 A;  2JIO A;  3HKZ A;  4FFT A;  5T5M D;  2BH0 A;  3OUG A;  5T5I D;  4AYB A;  2R93 A;  2O5J D;  1CR5 A;  3GTO A;  2E2H A;  2JA6 A;  2E2I A;  1TWF A;  3X2I A;  1TWA A;  3ENG A;  4ZM7 A;  3GTQ A;  1UHE A;  1DMR A;  3GTL A;  4KOD A;  2PMZ A;  2PIC A;  2A6E D;  2Y0S A;  1PPY A;  3X2P A;  2YU9 A;  5C1B A;  3O5A A;  3GTG A;  2C45 A;  2DMR A;  2GAE A;  3GTP A;  4FER A;  1Y5I A;  2PNW A;  1QCS A;  1S3S A;  3CZB A;  3IR7 A;  4AZD A;  4DMR A;  3PLX B;  3QQ7 A;  1DMS A;  5GLY A;  1YNN D;  2NYA A;  1FDO A;  2VPW A;  1OA9 A;  5DYI A;  2V45 A;  4AOK B;  5FTL A;  1SFO A;  3IR6 A;  1AA6 A;  1K83 A;  1PQH A;  2JIQ A;  2A6H D;  4RV0 A;  2JA5 A;  1PQF A;  4GA5 A;  3D30 A;  2VUM A;  2G6G A;  2JA7 A;  2AE0 X;  1AW8 B;  1CZ5 A;  1IW7 D;  4KLN A;  5C18 A;  3HU1 A;  3QC8 A;  1BW4 A;  4C2M A;  4AON B;  3X2J A;  3SUK A;  4CRY G;  4JP7 A;  2R7Z A;  3QQ8 A;  1PYQ A;  3X2G A;  5H4U A;  1Y1W A;  1R27 A;  2WAQ A;  1YLE A;  5FTK A;  3TIW A;  3ML1 A;  2NVX A;  3X2N A;  1TWG A;  1VC3 B;  1ZYR D;  1CZ4 A;  3QWZ A;  3X2K A;  1PT0 A;  4NOH A;  4ENG A;  1R7R A;  3HU2 A;  3X2L A;  4KDI A;  1KQG A;  3CF2 A;  3H0G A;  4JCW A;  3M3G A;  2V3V A;  3X2H A;  5GLX A;  4L48 A;  3TM7 B;  2A68 D;  3GTJ A;  1UHD A;  3SUJ A;  1Y1V A;  3GTK A;  5GLF A;  3X2M A;  4JP6 A;  1EU1 A;  1R9T A;  2BE5 D;  5GM9 A;  1E18 A;  2CW0 D;  2PJH B;  4JJO A;  1H0H A;  2VPX A;  2A69 D;  1TWH A;  2E7Z A;  2R92 A;  4FG2 A;  1YNJ D;  1PT1 A;  3HU3 A;  1SIW A;  3X2O A;  2PJJ A;  1BW3 A;  4FG4 A;  1WC2 A;  1G8K A;  4QIW A;  1H5N A;  1Y4Z A;  2EEO B;  1KQF A; 
#chains in the Genus database with same CATH homology
 1N10 A;  4FFT A;  5GLY A;  2BH0 A;  3X2K A;  4ENG A;  1OA9 A;  4JS7 A;  3SUL A;  3X2L A;  4JCW A;  3X2H A;  5GLX A;  4L48 A;  4AVR A;  2ENG A;  3X2I A;  3ENG A;  3SUJ A;  4ZM7 A;  2PI8 A;  3X2M A;  4JP6 A;  1L8F A;  2PIC A;  3D30 A;  3X2P A;  5GM9 A;  2G6G A;  2AE0 X;  2KQA A;  1HD5 A;  4JJO A;  1OA7 A;  2HCZ X;  2GAE A;  3SUM A;  1BW4 A;  3X2J A;  3SUK A;  2G5D A;  4FER A;  4FG2 A;  4JP7 A;  3X2G A;  5H4U A;  3X2O A;  2PJJ A;  2PNW A;  1BW3 A;  4FG4 A;  1WC2 A;  3CZB A;  3X2N A;  3M3G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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