3X2JA

X-ray structure of pccel45a d114n apo form at 95k.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title "Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
molecule keywords Endoglucanase V-like protein
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2jA00
2GAEA 2KQAA 2ENGA 4FG2A 5GLXA 1L8FA 3SUJA 3X2JA 3X2GA 1OA9A 2PJJA 1HD5A 3D30A 3X2PA 1WC2A 2AE0X 4ENGA 5GLYA 3ENGA 3SUMA 4FG4A 3X2KA 1BW4A 2PI8A 4FERA 4JCWA 4FFTA 3X2MA 1OA7A 3X2HA 2PICA 2PNWA 3X2IA 4JJOA 3M3GA 1N10A 5H4UA 2G6GA 3SUKA 4ZM7A 3SULA 4JP7A 3CZBA 3X2NA 1BW3A 4JS7A 2G5DA 4JP6A 3X2OA 3X2LA 4L48A 2HCZX 2BH0A 5GM9A 4AVRA
chains in the Genus database with same CATH superfamily
1PQEA 2KQAA 4FG2A 3H0GA 2A69D 3QQ8A 1Y1WA 1K83A 3TM7B 5B6CA 3D30A 2PJHB 4AYBA 3GTQA 2R7ZA 2JIRA 1SMYD 3DMRA 3ML1A 2KI8A 1I3QA 5DYGA 4AOKB 4JCWA 1BW4A 5FTKA 4AZDA 1WLFA 2PNWA 3X2IA 2B63A 3GTMA 2NVXA 3SUKA 3GTLA 4CRZA 1BW3A 1VC3B 1Y5IA 1E60A 4L48A 1TWFA 2BH0A 1CZ5A 3HU1A 2ENGA 1PYUB 5GLXA 4AONB 3SUJA 5EPPA 1YNJD 3X2JA 3X2GA 4D7ZB 2PJJA 2JIOA 1HD5A 2JIQA 4KDLA 3X2PA 1R7RA 1R27A 3CF2A 2CW0D 1S3SA 3QQ7A 4KODA 5DYIA 4ENGA 5FTLA 4KO8A 1QCSA 4FG4A 1SFOA 2PI8A 3X2MA 1TWAA 3HKZA 1ZC1A 2PICA 1PQFA 1PPYA 2VPWA 1G8KA 3IR7A 3M3GA 5H4UA 1CZ4A 2C45A 1I50A 4JP7A 4C2MA 1PYQA 2VPYA 4CRYG 2JIPA 2V45A 3GTOA 2E2HA 1E32A 3X2LA 1UHEA 2JA6A 2NYAA 2GAEA 3GTKA 1QDNA 2E2IA 1L8FA 1R9TA 4NOHA 1OA9A 2VPXA 5T5MD 2JA7A 2JA5A 3OUGA 2A6HD 5FTNA 2VUMA 4CS0A 1PQHA 1Y1VA 2Y0SA 2AE0X 1SIWA 2PMZA 1TWCA 1H5NA 1DMSA 2BE5D 2V3VA 4FERA 2JIMA 2IV2X 3TIWA 1OA7A 5C1BA 1E18A 1FDOA 1IW7D 3IR5A 2R92A 2NAPA 1WCMA 4GA5A 4JJOA 2G6GA 2DMRA 1AW8B 2VPZA 3HU2A 2WB1A 1OGYA 4JS7A 3QWZA 2HCZX 2A68D 5GM9A 4AVRA 1YNND 3O5AA 1H0HA 3GTPA 3HU3A 2YU9A 1DMRA 2A6ED 4KLNA 4AAYA 3GTGA 3PLXB 1TWHA 5T5ID 1TWGA 2YUJA 2E7ZA 5FTJA 3IR6A 3GTJA 1YLEA 1WC2A 5GLYA 1KQFA 1E5VA 3FKIA 3QC8A 3SUMA 1CR5A 1Y4ZA 4KDIA 4RV0A 3X2KA 2R93A 4QIWA 1E61A 3CQZA 4DMRA 4FFTA 1TMOA 4GA6A 3X2HA 2EEOB 2NVYA 1Q16A 1N10A 1ZYRD 2WAQA 4ZM7A 1UHDA 3SULA 1KQGA 3CZBA 3X2NA 1PT1A 2O5JD 5FTMA 5C18A 2G5DA 4JP6A 1G8JA 3X2OA 1AA6A 5GLFA 3ENGA 1EU1A 1FDIA 1PT0A
chains in the Genus database with same CATH topology
2GAEA 2KQAA 2ENGA 4FG2A 5GLXA 1L8FA 3SUJA 3X2JA 3X2GA 1OA9A 2PJJA 1HD5A 3D30A 3X2PA 1WC2A 2AE0X 4ENGA 5GLYA 3ENGA 3SUMA 4FG4A 3X2KA 1BW4A 2PI8A 4FERA 4JCWA 4FFTA 3X2MA 1OA7A 3X2HA 2PICA 2PNWA 3X2IA 4JJOA 3M3GA 1N10A 5H4UA 2G6GA 3SUKA 4ZM7A 3SULA 4JP7A 3CZBA 3X2NA 1BW3A 4JS7A 2G5DA 4JP6A 3X2OA 3X2LA 4L48A 2HCZX 2BH0A 5GM9A 4AVRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GAE A;  2KQA A;  2ENG A;  4FG2 A;  5GLX A;  1L8F A;  3SUJ A;  3X2J A;  3X2G A;  1OA9 A;  2PJJ A;  1HD5 A;  3D30 A;  3X2P A;  1WC2 A;  2AE0 X;  4ENG A;  5GLY A;  3ENG A;  3SUM A;  4FG4 A;  3X2K A;  1BW4 A;  2PI8 A;  4FER A;  4JCW A;  4FFT A;  3X2M A;  1OA7 A;  3X2H A;  2PIC A;  2PNW A;  3X2I A;  4JJO A;  3M3G A;  1N10 A;  5H4U A;  2G6G A;  3SUK A;  4ZM7 A;  3SUL A;  4JP7 A;  3CZB A;  3X2N A;  1BW3 A;  4JS7 A;  2G5D A;  4JP6 A;  3X2O A;  3X2L A;  4L48 A;  2HCZ X;  2BH0 A;  5GM9 A;  4AVR A; 
#chains in the Genus database with same CATH topology
 1PQE A;  2KQA A;  4FG2 A;  3H0G A;  2A69 D;  3QQ8 A;  1Y1W A;  1K83 A;  3TM7 B;  5B6C A;  3D30 A;  2PJH B;  4AYB A;  3GTQ A;  2R7Z A;  2JIR A;  1SMY D;  3DMR A;  3ML1 A;  2KI8 A;  1I3Q A;  5DYG A;  4AOK B;  4JCW A;  1BW4 A;  5FTK A;  4AZD A;  1WLF A;  2PNW A;  3X2I A;  2B63 A;  3GTM A;  2NVX A;  3SUK A;  3GTL A;  4CRZ A;  1BW3 A;  1VC3 B;  1Y5I A;  1E60 A;  4L48 A;  1TWF A;  2BH0 A;  1CZ5 A;  3HU1 A;  2ENG A;  1PYU B;  5GLX A;  4AON B;  3SUJ A;  5EPP A;  1YNJ D;  3X2J A;  3X2G A;  4D7Z B;  2PJJ A;  2JIO A;  1HD5 A;  2JIQ A;  4KDL A;  3X2P A;  1R7R A;  1R27 A;  3CF2 A;  2CW0 D;  1S3S A;  3QQ7 A;  4KOD A;  5DYI A;  4ENG A;  5FTL A;  4KO8 A;  1QCS A;  4FG4 A;  1SFO A;  2PI8 A;  3X2M A;  1TWA A;  3HKZ A;  1ZC1 A;  2PIC A;  1PQF A;  1PPY A;  2VPW A;  1G8K A;  3IR7 A;  3M3G A;  5H4U A;  1CZ4 A;  2C45 A;  1I50 A;  4JP7 A;  4C2M A;  1PYQ A;  2VPY A;  4CRY G;  2JIP A;  2V45 A;  3GTO A;  2E2H A;  1E32 A;  3X2L A;  1UHE A;  2JA6 A;  2NYA A;  2GAE A;  3GTK A;  1QDN A;  2E2I A;  1L8F A;  1R9T A;  4NOH A;  1OA9 A;  2VPX A;  5T5M D;  2JA7 A;  2JA5 A;  3OUG A;  2A6H D;  5FTN A;  2VUM A;  4CS0 A;  1PQH A;  1Y1V A;  2Y0S A;  2AE0 X;  1SIW A;  2PMZ A;  1TWC A;  1H5N A;  1DMS A;  2BE5 D;  2V3V A;  4FER A;  2JIM A;  2IV2 X;  3TIW A;  1OA7 A;  5C1B A;  1E18 A;  1FDO A;  1IW7 D;  3IR5 A;  2R92 A;  2NAP A;  1WCM A;  4GA5 A;  4JJO A;  2G6G A;  2DMR A;  1AW8 B;  2VPZ A;  3HU2 A;  2WB1 A;  1OGY A;  4JS7 A;  3QWZ A;  2HCZ X;  2A68 D;  5GM9 A;  4AVR A;  1YNN D;  3O5A A;  1H0H A;  3GTP A;  3HU3 A;  2YU9 A;  1DMR A;  2A6E D;  4KLN A;  4AAY A;  3GTG A;  3PLX B;  1TWH A;  5T5I D;  1TWG A;  2YUJ A;  2E7Z A;  5FTJ A;  3IR6 A;  3GTJ A;  1YLE A;  1WC2 A;  5GLY A;  1KQF A;  1E5V A;  3FKI A;  3QC8 A;  3SUM A;  1CR5 A;  1Y4Z A;  4KDI A;  4RV0 A;  3X2K A;  2R93 A;  4QIW A;  1E61 A;  3CQZ A;  4DMR A;  4FFT A;  1TMO A;  4GA6 A;  3X2H A;  2EEO B;  2NVY A;  1Q16 A;  1N10 A;  1ZYR D;  2WAQ A;  4ZM7 A;  1UHD A;  3SUL A;  1KQG A;  3CZB A;  3X2N A;  1PT1 A;  2O5J D;  5FTM A;  5C18 A;  2G5D A;  4JP6 A;  1G8J A;  3X2O A;  1AA6 A;  5GLF A;  3ENG A;  1EU1 A;  1FDI A;  1PT0 A; 
#chains in the Genus database with same CATH homology
 2GAE A;  2KQA A;  2ENG A;  4FG2 A;  5GLX A;  1L8F A;  3SUJ A;  3X2J A;  3X2G A;  1OA9 A;  2PJJ A;  1HD5 A;  3D30 A;  3X2P A;  1WC2 A;  2AE0 X;  4ENG A;  5GLY A;  3ENG A;  3SUM A;  4FG4 A;  3X2K A;  1BW4 A;  2PI8 A;  4FER A;  4JCW A;  4FFT A;  3X2M A;  1OA7 A;  3X2H A;  2PIC A;  2PNW A;  3X2I A;  4JJO A;  3M3G A;  1N10 A;  5H4U A;  2G6G A;  3SUK A;  4ZM7 A;  3SUL A;  4JP7 A;  3CZB A;  3X2N A;  1BW3 A;  4JS7 A;  2G5D A;  4JP6 A;  3X2O A;  3X2L A;  4L48 A;  2HCZ X;  2BH0 A;  5GM9 A;  4AVR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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