3X2JA

X-ray structure of pccel45a d114n apo form at 95k.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title "Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2jA00
3X2NA 3ENGA 1BW3A 3SUJA 3X2HA 4FFTA 3CZBA 3X2KA 4JP7A 1WC2A 3SULA 2ENGA 4ZM7A 4AVRA 4FERA 1OA9A 3X2PA 2KQAA 5GLYA 3X2IA 3X2OA 1OA7A 4JJOA 2G5DA 2PNWA 3SUMA 4JS7A 3X2MA 5GM9A 2AE0X 4ENGA 2PI8A 4FG4A 2GAEA 2PICA 4FG2A 2PJJA 3M3GA 4L48A 5H4UA 3SUKA 1BW4A 1HD5A 3D30A 3X2JA 2G6GA 4JP6A 3X2LA 1L8FA 5GLXA 1N10A 3X2GA 2BH0A 4JCWA 2HCZX
chains in the Genus database with same CATH superfamily
2A68D 1R27A 2JIOA 5FTJA 2BE5D 3SUJA 4D7ZB 1E32A 3DMRA 1S3SA 4GA5A 1DMSA 1WC2A 3SULA 1SFOA 3TIWA 4ZM7A 1WCMA 4AVRA 1OGYA 2B63A 4AAYA 1OA9A 1DMRA 2NVYA 1VC3B 3IR6A 4JJOA 2G5DA 5DYIA 1QCSA 2PNWA 4KO8A 4KDIA 5GLFA 2E2IA 1QDNA 3PLXB 4JS7A 1R7RA 1Y4ZA 2YU9A 4RV0A 5FTKA 3QC8A 1TWHA 1AW8B 2JIPA 3GTPA 2Y0SA 2PICA 4FG2A 3M3GA 2IV2X 3D30A 2VUMA 2JIRA 1I3QA 3H0GA 3O5AA 4JP6A 1CZ5A 2VPXA 5GLXA 1N10A 4AOKB 5B6CA 3GTKA 1R9TA 1EU1A 1YLEA 3TM7B 3ENGA 3HU2A 5C18A 1BW3A 3X2KA 1Y5IA 2R7ZA 1PPYA 1PT1A 5EPPA 2CW0D 4KDLA 2JA7A 3X2PA 3X2IA 4KLNA 3X2OA 1ZYRD 3CF2A 4KODA 4AYBA 3OUGA 3X2MA 5GM9A 2AE0X 4AZDA 2DMRA 1TWCA 2VPZA 5DYGA 3IR7A 2A69D 3X2JA 1AA6A 1WLFA 3GTQA 2EEOB 2G6GA 3GTGA 2NAPA 1H5NA 1YNND 2BH0A 4JCWA 1I50A 2HCZX 3X2NA 4CRZA 1SMYD 5FTMA 1G8KA 2E2HA 1UHEA 3ML1A 4FFTA 4JP7A 3HU1A 2WB1A 2ENGA 1E5VA 2PJHB 2VPYA 2VPWA 3HKZA 4CRYG 5T5MD 5FTLA 1KQFA 4C2MA 2R92A 1Q16A 1KQGA 2JIMA 1PQEA 1SIWA 2GAEA 4GA6A 3CQZA 3FKIA 3SUKA 5H4UA 4L48A 1TWAA 1HD5A 1E18A 1FDIA 1TWGA 4AONB 3X2LA 1L8FA 2YUJA 2KI8A 2A6HD 3HU3A 1PT0A 1G8JA 1TWFA 2V3VA 2C45A 3X2HA 3IR5A 2A6ED 3CZBA 1Y1VA 3QQ8A 3GTLA 1E61A 4FERA 3QWZA 2NVXA 2R93A 1Y1WA 2KQAA 1UHDA 1IW7D 4QIWA 1CZ4A 5GLYA 1PQHA 1OA7A 3GTJA 5C1BA 5T5ID 3GTMA 4CS0A 3SUMA 1PQFA 2JA5A 3QQ7A 2O5JD 4ENGA 2PI8A 1PYUB 4FG4A 1E60A 2V45A 1TMOA 4DMRA 2JA6A 2PJJA 2E7ZA 2PMZA 1BW4A 1H0HA 1CR5A 5FTNA 1YNJD 4NOHA 1ZC1A 1PYQA 2NYAA 1FDOA 1K83A 3X2GA 2WAQA 3GTOA 2JIQA
chains in the Genus database with same CATH topology
3X2NA 3ENGA 1BW3A 3SUJA 3X2HA 4FFTA 3CZBA 3X2KA 4JP7A 1WC2A 3SULA 2ENGA 4ZM7A 4AVRA 4FERA 1OA9A 3X2PA 2KQAA 5GLYA 3X2IA 3X2OA 1OA7A 4JJOA 2G5DA 2PNWA 3SUMA 4JS7A 3X2MA 5GM9A 2AE0X 4ENGA 2PI8A 4FG4A 2GAEA 2PICA 4FG2A 2PJJA 3M3GA 4L48A 5H4UA 3SUKA 1BW4A 1HD5A 3D30A 3X2JA 2G6GA 4JP6A 3X2LA 1L8FA 5GLXA 1N10A 3X2GA 2BH0A 4JCWA 2HCZX
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3X2N A;  3ENG A;  1BW3 A;  3SUJ A;  3X2H A;  4FFT A;  3CZB A;  3X2K A;  4JP7 A;  1WC2 A;  3SUL A;  2ENG A;  4ZM7 A;  4AVR A;  4FER A;  1OA9 A;  3X2P A;  2KQA A;  5GLY A;  3X2I A;  3X2O A;  1OA7 A;  4JJO A;  2G5D A;  2PNW A;  3SUM A;  4JS7 A;  3X2M A;  5GM9 A;  2AE0 X;  4ENG A;  2PI8 A;  4FG4 A;  2GAE A;  2PIC A;  4FG2 A;  2PJJ A;  3M3G A;  4L48 A;  5H4U A;  3SUK A;  1BW4 A;  1HD5 A;  3D30 A;  3X2J A;  2G6G A;  4JP6 A;  3X2L A;  1L8F A;  5GLX A;  1N10 A;  3X2G A;  2BH0 A;  4JCW A;  2HCZ X; 
#chains in the Genus database with same CATH topology
 2A68 D;  1R27 A;  2JIO A;  5FTJ A;  2BE5 D;  3SUJ A;  4D7Z B;  1E32 A;  3DMR A;  1S3S A;  4GA5 A;  1DMS A;  1WC2 A;  3SUL A;  1SFO A;  3TIW A;  4ZM7 A;  1WCM A;  4AVR A;  1OGY A;  2B63 A;  4AAY A;  1OA9 A;  1DMR A;  2NVY A;  1VC3 B;  3IR6 A;  4JJO A;  2G5D A;  5DYI A;  1QCS A;  2PNW A;  4KO8 A;  4KDI A;  5GLF A;  2E2I A;  1QDN A;  3PLX B;  4JS7 A;  1R7R A;  1Y4Z A;  2YU9 A;  4RV0 A;  5FTK A;  3QC8 A;  1TWH A;  1AW8 B;  2JIP A;  3GTP A;  2Y0S A;  2PIC A;  4FG2 A;  3M3G A;  2IV2 X;  3D30 A;  2VUM A;  2JIR A;  1I3Q A;  3H0G A;  3O5A A;  4JP6 A;  1CZ5 A;  2VPX A;  5GLX A;  1N10 A;  4AOK B;  5B6C A;  3GTK A;  1R9T A;  1EU1 A;  1YLE A;  3TM7 B;  3ENG A;  3HU2 A;  5C18 A;  1BW3 A;  3X2K A;  1Y5I A;  2R7Z A;  1PPY A;  1PT1 A;  5EPP A;  2CW0 D;  4KDL A;  2JA7 A;  3X2P A;  3X2I A;  4KLN A;  3X2O A;  1ZYR D;  3CF2 A;  4KOD A;  4AYB A;  3OUG A;  3X2M A;  5GM9 A;  2AE0 X;  4AZD A;  2DMR A;  1TWC A;  2VPZ A;  5DYG A;  3IR7 A;  2A69 D;  3X2J A;  1AA6 A;  1WLF A;  3GTQ A;  2EEO B;  2G6G A;  3GTG A;  2NAP A;  1H5N A;  1YNN D;  2BH0 A;  4JCW A;  1I50 A;  2HCZ X;  3X2N A;  4CRZ A;  1SMY D;  5FTM A;  1G8K A;  2E2H A;  1UHE A;  3ML1 A;  4FFT A;  4JP7 A;  3HU1 A;  2WB1 A;  2ENG A;  1E5V A;  2PJH B;  2VPY A;  2VPW A;  3HKZ A;  4CRY G;  5T5M D;  5FTL A;  1KQF A;  4C2M A;  2R92 A;  1Q16 A;  1KQG A;  2JIM A;  1PQE A;  1SIW A;  2GAE A;  4GA6 A;  3CQZ A;  3FKI A;  3SUK A;  5H4U A;  4L48 A;  1TWA A;  1HD5 A;  1E18 A;  1FDI A;  1TWG A;  4AON B;  3X2L A;  1L8F A;  2YUJ A;  2KI8 A;  2A6H D;  3HU3 A;  1PT0 A;  1G8J A;  1TWF A;  2V3V A;  2C45 A;  3X2H A;  3IR5 A;  2A6E D;  3CZB A;  1Y1V A;  3QQ8 A;  3GTL A;  1E61 A;  4FER A;  3QWZ A;  2NVX A;  2R93 A;  1Y1W A;  2KQA A;  1UHD A;  1IW7 D;  4QIW A;  1CZ4 A;  5GLY A;  1PQH A;  1OA7 A;  3GTJ A;  5C1B A;  5T5I D;  3GTM A;  4CS0 A;  3SUM A;  1PQF A;  2JA5 A;  3QQ7 A;  2O5J D;  4ENG A;  2PI8 A;  1PYU B;  4FG4 A;  1E60 A;  2V45 A;  1TMO A;  4DMR A;  2JA6 A;  2PJJ A;  2E7Z A;  2PMZ A;  1BW4 A;  1H0H A;  1CR5 A;  5FTN A;  1YNJ D;  4NOH A;  1ZC1 A;  1PYQ A;  2NYA A;  1FDO A;  1K83 A;  3X2G A;  2WAQ A;  3GTO A;  2JIQ A; 
#chains in the Genus database with same CATH homology
 3X2N A;  3ENG A;  1BW3 A;  3SUJ A;  3X2H A;  4FFT A;  3CZB A;  3X2K A;  4JP7 A;  1WC2 A;  3SUL A;  2ENG A;  4ZM7 A;  4AVR A;  4FER A;  1OA9 A;  3X2P A;  2KQA A;  5GLY A;  3X2I A;  3X2O A;  1OA7 A;  4JJO A;  2G5D A;  2PNW A;  3SUM A;  4JS7 A;  3X2M A;  5GM9 A;  2AE0 X;  4ENG A;  2PI8 A;  4FG4 A;  2GAE A;  2PIC A;  4FG2 A;  2PJJ A;  3M3G A;  4L48 A;  5H4U A;  3SUK A;  1BW4 A;  1HD5 A;  3D30 A;  3X2J A;  2G6G A;  4JP6 A;  3X2L A;  1L8F A;  5GLX A;  1N10 A;  3X2G A;  2BH0 A;  4JCW A;  2HCZ X; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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