3X2JA

X-ray structure of pccel45a d114n apo form at 95k.
Total Genus 48
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Endoglucanase V-like protein
publication title "Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2jA00
4ENGA 1L8FA 3X2OA 3X2KA 3X2NA 5GLXA 2PICA 1N10A 4JCWA 5GM9A 2GAEA 3M3GA 4FFTA 2ENGA 1BW4A 3X2HA 3ENGA 1OA7A 4FERA 2PJJA 4JP7A 4JS7A 3SUMA 3SUJA 2G5DA 1WC2A 1HD5A 2PI8A 4FG4A 4JP6A 3SUKA 2PNWA 3X2JA 3D30A 4L48A 2AE0X 5H4UA 3X2IA 4AVRA 3X2LA 4ZM7A 1BW3A 1OA9A 3X2MA 4JJOA 2KQAA 2BH0A 3SULA 3X2GA 2G6GA 4FG2A 3CZBA 2HCZX 3X2PA 5GLYA
chains in the Genus database with same CATH superfamily
3IR7A 5GLFA 1CZ4A 1OGYA 3HU2A 2JIRA 1WCMA 3QQ8A 1UHEA 1N10A 2A69D 1QDNA 2V3VA 3CF2A 1R27A 4KODA 4FFTA 1KQGA 2C45A 2ENGA 2E2HA 5DYGA 1PYQA 3ENGA 2JIMA 4FERA 2DMRA 3CQZA 4JS7A 3SUMA 1G8KA 3SUJA 1VC3B 1H0HA 5FTJA 1S3SA 3GTQA 2PNWA 4CRZA 3D30A 2YUJA 1TWGA 1I50A 3X2IA 4AVRA 3GTJA 4ZM7A 3IR5A 1E5VA 1PT1A 1Y1WA 2EEOB 3QWZA 4FG2A 1SIWA 5GLYA 2VUMA 1L8FA 3X2OA 1FDIA 4CS0A 1CZ5A 5FTMA 2NYAA 1PT0A 2WB1A 5GM9A 2NAPA 2R92A 1BW4A 4KDLA 2KI8A 5T5ID 1EU1A 5EPPA 4C2MA 1QCSA 4NOHA 2G5DA 1E32A 4JP6A 3QQ7A 2B63A 2V45A 1PQEA 1E61A 3QC8A 4AZDA 5FTLA 2O5JD 1TWFA 2NVXA 3TM7B 1BW3A 1Y4ZA 1TWAA 4KDIA 1H5NA 1IW7D 1PYUB 1E18A 3X2MA 2JA6A 1K83A 2BH0A 3SULA 3X2GA 4AAYA 1TMOA 2HCZX 1R7RA 4GA6A 2E7ZA 3X2KA 2NVYA 4RV0A 3H0GA 3GTGA 2PICA 1KQFA 2VPWA 4JCWA 1PPYA 5FTKA 1ZC1A 1E60A 1OA7A 5DYIA 1TWHA 2PJJA 5C18A 2JA7A 1Y5IA 3ML1A 1SFOA 3SUKA 4KLNA 3X2JA 3IR6A 1G8JA 2JIPA 3PLXB 1DMSA 1YLEA 3HKZA 4AONB 2VPXA 3GTLA 1OA9A 2JIOA 1FDOA 2BE5D 3FKIA 2JA5A 3HU1A 1Y1VA 1UHDA 1ZYRD 4QIWA 2VPZA 2CW0D 5FTNA 4AOKB 3X2PA 5C1BA 2A6ED 1R9TA 4ENGA 4DMRA 1I3QA 4AYBA 3GTPA 3X2NA 5GLXA 3O5AA 2E2IA 1TWCA 1DMRA 2WAQA 2GAEA 1WLFA 3M3GA 3GTKA 3OUGA 3X2HA 4KO8A 2YU9A 2JIQA 5T5MD 1AW8B 4JP7A 2A68D 3DMRA 4CRYG 1YNJD 2R93A 1HD5A 1WC2A 2PI8A 4FG4A 3HU3A 2PJHB 1CR5A 4L48A 1PQHA 2AE0X 3GTOA 5H4UA 4D7ZB 2PMZA 2VPYA 3X2LA 5B6CA 2A6HD 1Q16A 4GA5A 2Y0SA 4JJOA 1SMYD 2IV2X 2R7ZA 2KQAA 2G6GA 3CZBA 3GTMA 1AA6A 1YNND 1PQFA 3TIWA
chains in the Genus database with same CATH topology
4ENGA 1L8FA 3X2OA 3X2KA 3X2NA 5GLXA 2PICA 1N10A 4JCWA 5GM9A 2GAEA 3M3GA 4FFTA 2ENGA 1BW4A 3X2HA 3ENGA 1OA7A 4FERA 2PJJA 4JP7A 4JS7A 3SUMA 3SUJA 2G5DA 1WC2A 1HD5A 2PI8A 4FG4A 4JP6A 3SUKA 2PNWA 3X2JA 3D30A 4L48A 2AE0X 5H4UA 3X2IA 4AVRA 3X2LA 4ZM7A 1BW3A 1OA9A 3X2MA 4JJOA 2KQAA 2BH0A 3SULA 3X2GA 2G6GA 4FG2A 3CZBA 2HCZX 3X2PA 5GLYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ENG A;  1L8F A;  3X2O A;  3X2K A;  3X2N A;  5GLX A;  2PIC A;  1N10 A;  4JCW A;  5GM9 A;  2GAE A;  3M3G A;  4FFT A;  2ENG A;  1BW4 A;  3X2H A;  3ENG A;  1OA7 A;  4FER A;  2PJJ A;  4JP7 A;  4JS7 A;  3SUM A;  3SUJ A;  2G5D A;  1WC2 A;  1HD5 A;  2PI8 A;  4FG4 A;  4JP6 A;  3SUK A;  2PNW A;  3X2J A;  3D30 A;  4L48 A;  2AE0 X;  5H4U A;  3X2I A;  4AVR A;  3X2L A;  4ZM7 A;  1BW3 A;  1OA9 A;  3X2M A;  4JJO A;  2KQA A;  2BH0 A;  3SUL A;  3X2G A;  2G6G A;  4FG2 A;  3CZB A;  2HCZ X;  3X2P A;  5GLY A; 
#chains in the Genus database with same CATH topology
 3IR7 A;  5GLF A;  1CZ4 A;  1OGY A;  3HU2 A;  2JIR A;  1WCM A;  3QQ8 A;  1UHE A;  1N10 A;  2A69 D;  1QDN A;  2V3V A;  3CF2 A;  1R27 A;  4KOD A;  4FFT A;  1KQG A;  2C45 A;  2ENG A;  2E2H A;  5DYG A;  1PYQ A;  3ENG A;  2JIM A;  4FER A;  2DMR A;  3CQZ A;  4JS7 A;  3SUM A;  1G8K A;  3SUJ A;  1VC3 B;  1H0H A;  5FTJ A;  1S3S A;  3GTQ A;  2PNW A;  4CRZ A;  3D30 A;  2YUJ A;  1TWG A;  1I50 A;  3X2I A;  4AVR A;  3GTJ A;  4ZM7 A;  3IR5 A;  1E5V A;  1PT1 A;  1Y1W A;  2EEO B;  3QWZ A;  4FG2 A;  1SIW A;  5GLY A;  2VUM A;  1L8F A;  3X2O A;  1FDI A;  4CS0 A;  1CZ5 A;  5FTM A;  2NYA A;  1PT0 A;  2WB1 A;  5GM9 A;  2NAP A;  2R92 A;  1BW4 A;  4KDL A;  2KI8 A;  5T5I D;  1EU1 A;  5EPP A;  4C2M A;  1QCS A;  4NOH A;  2G5D A;  1E32 A;  4JP6 A;  3QQ7 A;  2B63 A;  2V45 A;  1PQE A;  1E61 A;  3QC8 A;  4AZD A;  5FTL A;  2O5J D;  1TWF A;  2NVX A;  3TM7 B;  1BW3 A;  1Y4Z A;  1TWA A;  4KDI A;  1H5N A;  1IW7 D;  1PYU B;  1E18 A;  3X2M A;  2JA6 A;  1K83 A;  2BH0 A;  3SUL A;  3X2G A;  4AAY A;  1TMO A;  2HCZ X;  1R7R A;  4GA6 A;  2E7Z A;  3X2K A;  2NVY A;  4RV0 A;  3H0G A;  3GTG A;  2PIC A;  1KQF A;  2VPW A;  4JCW A;  1PPY A;  5FTK A;  1ZC1 A;  1E60 A;  1OA7 A;  5DYI A;  1TWH A;  2PJJ A;  5C18 A;  2JA7 A;  1Y5I A;  3ML1 A;  1SFO A;  3SUK A;  4KLN A;  3X2J A;  3IR6 A;  1G8J A;  2JIP A;  3PLX B;  1DMS A;  1YLE A;  3HKZ A;  4AON B;  2VPX A;  3GTL A;  1OA9 A;  2JIO A;  1FDO A;  2BE5 D;  3FKI A;  2JA5 A;  3HU1 A;  1Y1V A;  1UHD A;  1ZYR D;  4QIW A;  2VPZ A;  2CW0 D;  5FTN A;  4AOK B;  3X2P A;  5C1B A;  2A6E D;  1R9T A;  4ENG A;  4DMR A;  1I3Q A;  4AYB A;  3GTP A;  3X2N A;  5GLX A;  3O5A A;  2E2I A;  1TWC A;  1DMR A;  2WAQ A;  2GAE A;  1WLF A;  3M3G A;  3GTK A;  3OUG A;  3X2H A;  4KO8 A;  2YU9 A;  2JIQ A;  5T5M D;  1AW8 B;  4JP7 A;  2A68 D;  3DMR A;  4CRY G;  1YNJ D;  2R93 A;  1HD5 A;  1WC2 A;  2PI8 A;  4FG4 A;  3HU3 A;  2PJH B;  1CR5 A;  4L48 A;  1PQH A;  2AE0 X;  3GTO A;  5H4U A;  4D7Z B;  2PMZ A;  2VPY A;  3X2L A;  5B6C A;  2A6H D;  1Q16 A;  4GA5 A;  2Y0S A;  4JJO A;  1SMY D;  2IV2 X;  2R7Z A;  2KQA A;  2G6G A;  3CZB A;  3GTM A;  1AA6 A;  1YNN D;  1PQF A;  3TIW A; 
#chains in the Genus database with same CATH homology
 4ENG A;  1L8F A;  3X2O A;  3X2K A;  3X2N A;  5GLX A;  2PIC A;  1N10 A;  4JCW A;  5GM9 A;  2GAE A;  3M3G A;  4FFT A;  2ENG A;  1BW4 A;  3X2H A;  3ENG A;  1OA7 A;  4FER A;  2PJJ A;  4JP7 A;  4JS7 A;  3SUM A;  3SUJ A;  2G5D A;  1WC2 A;  1HD5 A;  2PI8 A;  4FG4 A;  4JP6 A;  3SUK A;  2PNW A;  3X2J A;  3D30 A;  4L48 A;  2AE0 X;  5H4U A;  3X2I A;  4AVR A;  3X2L A;  4ZM7 A;  1BW3 A;  1OA9 A;  3X2M A;  4JJO A;  2KQA A;  2BH0 A;  3SUL A;  3X2G A;  2G6G A;  4FG2 A;  3CZB A;  2HCZ X;  3X2P A;  5GLY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...