3X2JA

X-ray structure of pccel45a d114n apo form at 95k.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
publication title "Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2jA00
3M3GA 2KQAA 3X2MA 4ENGA 3X2OA 1L8FA 1N10A 1OA9A 2HCZX 4FERA 3X2IA 3X2HA 1BW4A 4JCWA 3SUMA 2PNWA 5GLYA 3X2LA 3X2PA 2AE0X 1WC2A 4FFTA 3ENGA 4JJOA 5GM9A 2GAEA 2PI8A 2PJJA 3X2JA 5H4UA 3X2KA 4FG4A 1OA7A 2G5DA 3CZBA 4JP7A 4L48A 3SUJA 4JP6A 2ENGA 4AVRA 3D30A 1HD5A 3X2NA 2PICA 3X2GA 5GLXA 1BW3A 4ZM7A 2BH0A 4FG2A 3SUKA 2G6GA 3SULA 4JS7A
chains in the Genus database with same CATH superfamily
2V3VA 1G8KA 1WCMA 1IW7D 1TWGA 2JIOA 4NOHA 2R7ZA 4AAYA 1SFOA 1E32A 1QDNA 4CRZA 5GLFA 3HU2A 4ENGA 1CR5A 3CF2A 1Y4ZA 1OA9A 3GTMA 1K83A 1PYUB 1BW4A 3X2LA 1TWAA 2V45A 3IR6A 1E5VA 1PQHA 1WC2A 3ENGA 2YU9A 2R92A 2JA5A 2A68D 3TM7B 5FTMA 2VPZA 2G5DA 4L48A 3SUJA 1I50A 4JP6A 1FDIA 2ENGA 4AVRA 1SIWA 4GA5A 2PICA 3X2GA 5FTLA 2CW0D 2Y0SA 2VUMA 2BE5D 1E60A 3IR5A 3GTOA 2BH0A 1UHDA 1H0HA 1I3QA 2YUJA 2E2IA 1OGYA 1VC3B 1AA6A 1PYQA 1TWCA 1KQFA 1YNND 2A6ED 1CZ4A 3X2OA 1TWHA 3TIWA 1AW8B 5B6CA 4GA6A 2WAQA 3GTQA 4AOKB 2HCZX 5FTKA 5GLYA 1Y1VA 5T5ID 2WB1A 2AE0X 1PQFA 1G8JA 1R27A 5FTNA 2NVYA 1PT0A 2GAEA 2A6HD 1OA7A 2DMRA 4AONB 2NVXA 3QQ8A 4AZDA 1PQEA 1EU1A 1TMOA 3GTGA 3QQ7A 3HU1A 1WLFA 5GLXA 2E7ZA 4AYBA 2NYAA 2JIPA 5DYGA 3SUKA 1Q16A 1Y5IA 2EEOB 4RV0A 1DMSA 1SMYD 4DMRA 2JA7A 1DMRA 3GTLA 3DMRA 3M3GA 2VPWA 2VPYA 3IR7A 1L8FA 1KQGA 3X2IA 3GTPA 3X2HA 2PMZA 5FTJA 2PNWA 3X2PA 3H0GA 3CQZA 1R9TA 4FFTA 5EPPA 5GM9A 1YNJD 2JIRA 1TWFA 3ML1A 4FG4A 5H4UA 3X2KA 3OUGA 4CRYG 3CZBA 4JP7A 2E2HA 1HD5A 2R93A 3FKIA 3X2NA 1FDOA 1BW3A 1S3SA 3HU3A 1ZC1A 4FG2A 2G6GA 3SULA 3QWZA 4JS7A 5T5MD 4CS0A 2JIMA 2KI8A 3QC8A 5DYIA 3GTJA 4KO8A 2KQAA 3X2MA 2IV2X 2JA6A 2VPXA 4KODA 1R7RA 1YLEA 1N10A 4C2MA 4FERA 4JCWA 4KDIA 3SUMA 4JJOA 2PI8A 2PJJA 3X2JA 1PPYA 2NAPA 4D7ZB 1CZ5A 2C45A 1E61A 3PLXB 1QCSA 1ZYRD 2A69D 2O5JD 1Y1WA 1H5NA 2B63A 4KLNA 3D30A 3O5AA 5C18A 5C1BA 3GTKA 4KDLA 4ZM7A 3HKZA 2JIQA 1PT1A 4QIWA 1UHEA 1E18A 2PJHB
chains in the Genus database with same CATH topology
3M3GA 2KQAA 3X2MA 4ENGA 3X2OA 1L8FA 1N10A 1OA9A 2HCZX 4FERA 3X2IA 3X2HA 1BW4A 4JCWA 3SUMA 2PNWA 5GLYA 3X2LA 3X2PA 2AE0X 1WC2A 4FFTA 3ENGA 4JJOA 5GM9A 2GAEA 2PI8A 2PJJA 3X2JA 5H4UA 3X2KA 4FG4A 1OA7A 2G5DA 3CZBA 4JP7A 4L48A 3SUJA 4JP6A 2ENGA 4AVRA 3D30A 1HD5A 3X2NA 2PICA 3X2GA 5GLXA 1BW3A 4ZM7A 2BH0A 4FG2A 3SUKA 2G6GA 3SULA 4JS7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3M3G A;  2KQA A;  3X2M A;  4ENG A;  3X2O A;  1L8F A;  1N10 A;  1OA9 A;  2HCZ X;  4FER A;  3X2I A;  3X2H A;  1BW4 A;  4JCW A;  3SUM A;  2PNW A;  5GLY A;  3X2L A;  3X2P A;  2AE0 X;  1WC2 A;  4FFT A;  3ENG A;  4JJO A;  5GM9 A;  2GAE A;  2PI8 A;  2PJJ A;  3X2J A;  5H4U A;  3X2K A;  4FG4 A;  1OA7 A;  2G5D A;  3CZB A;  4JP7 A;  4L48 A;  3SUJ A;  4JP6 A;  2ENG A;  4AVR A;  3D30 A;  1HD5 A;  3X2N A;  2PIC A;  3X2G A;  5GLX A;  1BW3 A;  4ZM7 A;  2BH0 A;  4FG2 A;  3SUK A;  2G6G A;  3SUL A;  4JS7 A; 
#chains in the Genus database with same CATH topology
 2V3V A;  1G8K A;  1WCM A;  1IW7 D;  1TWG A;  2JIO A;  4NOH A;  2R7Z A;  4AAY A;  1SFO A;  1E32 A;  1QDN A;  4CRZ A;  5GLF A;  3HU2 A;  4ENG A;  1CR5 A;  3CF2 A;  1Y4Z A;  1OA9 A;  3GTM A;  1K83 A;  1PYU B;  1BW4 A;  3X2L A;  1TWA A;  2V45 A;  3IR6 A;  1E5V A;  1PQH A;  1WC2 A;  3ENG A;  2YU9 A;  2R92 A;  2JA5 A;  2A68 D;  3TM7 B;  5FTM A;  2VPZ A;  2G5D A;  4L48 A;  3SUJ A;  1I50 A;  4JP6 A;  1FDI A;  2ENG A;  4AVR A;  1SIW A;  4GA5 A;  2PIC A;  3X2G A;  5FTL A;  2CW0 D;  2Y0S A;  2VUM A;  2BE5 D;  1E60 A;  3IR5 A;  3GTO A;  2BH0 A;  1UHD A;  1H0H A;  1I3Q A;  2YUJ A;  2E2I A;  1OGY A;  1VC3 B;  1AA6 A;  1PYQ A;  1TWC A;  1KQF A;  1YNN D;  2A6E D;  1CZ4 A;  3X2O A;  1TWH A;  3TIW A;  1AW8 B;  5B6C A;  4GA6 A;  2WAQ A;  3GTQ A;  4AOK B;  2HCZ X;  5FTK A;  5GLY A;  1Y1V A;  5T5I D;  2WB1 A;  2AE0 X;  1PQF A;  1G8J A;  1R27 A;  5FTN A;  2NVY A;  1PT0 A;  2GAE A;  2A6H D;  1OA7 A;  2DMR A;  4AON B;  2NVX A;  3QQ8 A;  4AZD A;  1PQE A;  1EU1 A;  1TMO A;  3GTG A;  3QQ7 A;  3HU1 A;  1WLF A;  5GLX A;  2E7Z A;  4AYB A;  2NYA A;  2JIP A;  5DYG A;  3SUK A;  1Q16 A;  1Y5I A;  2EEO B;  4RV0 A;  1DMS A;  1SMY D;  4DMR A;  2JA7 A;  1DMR A;  3GTL A;  3DMR A;  3M3G A;  2VPW A;  2VPY A;  3IR7 A;  1L8F A;  1KQG A;  3X2I A;  3GTP A;  3X2H A;  2PMZ A;  5FTJ A;  2PNW A;  3X2P A;  3H0G A;  3CQZ A;  1R9T A;  4FFT A;  5EPP A;  5GM9 A;  1YNJ D;  2JIR A;  1TWF A;  3ML1 A;  4FG4 A;  5H4U A;  3X2K A;  3OUG A;  4CRY G;  3CZB A;  4JP7 A;  2E2H A;  1HD5 A;  2R93 A;  3FKI A;  3X2N A;  1FDO A;  1BW3 A;  1S3S A;  3HU3 A;  1ZC1 A;  4FG2 A;  2G6G A;  3SUL A;  3QWZ A;  4JS7 A;  5T5M D;  4CS0 A;  2JIM A;  2KI8 A;  3QC8 A;  5DYI A;  3GTJ A;  4KO8 A;  2KQA A;  3X2M A;  2IV2 X;  2JA6 A;  2VPX A;  4KOD A;  1R7R A;  1YLE A;  1N10 A;  4C2M A;  4FER A;  4JCW A;  4KDI A;  3SUM A;  4JJO A;  2PI8 A;  2PJJ A;  3X2J A;  1PPY A;  2NAP A;  4D7Z B;  1CZ5 A;  2C45 A;  1E61 A;  3PLX B;  1QCS A;  1ZYR D;  2A69 D;  2O5J D;  1Y1W A;  1H5N A;  2B63 A;  4KLN A;  3D30 A;  3O5A A;  5C18 A;  5C1B A;  3GTK A;  4KDL A;  4ZM7 A;  3HKZ A;  2JIQ A;  1PT1 A;  4QIW A;  1UHE A;  1E18 A;  2PJH B; 
#chains in the Genus database with same CATH homology
 3M3G A;  2KQA A;  3X2M A;  4ENG A;  3X2O A;  1L8F A;  1N10 A;  1OA9 A;  2HCZ X;  4FER A;  3X2I A;  3X2H A;  1BW4 A;  4JCW A;  3SUM A;  2PNW A;  5GLY A;  3X2L A;  3X2P A;  2AE0 X;  1WC2 A;  4FFT A;  3ENG A;  4JJO A;  5GM9 A;  2GAE A;  2PI8 A;  2PJJ A;  3X2J A;  5H4U A;  3X2K A;  4FG4 A;  1OA7 A;  2G5D A;  3CZB A;  4JP7 A;  4L48 A;  3SUJ A;  4JP6 A;  2ENG A;  4AVR A;  3D30 A;  1HD5 A;  3X2N A;  2PIC A;  3X2G A;  5GLX A;  1BW3 A;  4ZM7 A;  2BH0 A;  4FG2 A;  3SUK A;  2G6G A;  3SUL A;  4JS7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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