3X2JA

X-ray structure of pccel45a d114n apo form at 95k.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title "Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2jA00
1N10A 1OA9A 3SULA 4ZM7A 5GLXA 1BW3A 3D30A 3M3GA 4FERA 2KQAA 3X2PA 4FG4A 3X2KA 2G6GA 4AVRA 1HD5A 4ENGA 5GM9A 2PNWA 4JP7A 3X2MA 2PI8A 4JCWA 4L48A 4JJOA 3X2JA 4JS7A 3CZBA 2ENGA 1BW4A 2AE0X 2G5DA 4JP6A 1OA7A 3X2OA 3SUJA 3X2NA 2PJJA 2BH0A 3ENGA 3SUMA 4FG2A 3X2LA 1WC2A 3X2IA 2GAEA 3SUKA 3X2HA 4FFTA 2PICA 5H4UA 3X2GA 1L8FA 2HCZX 5GLYA
chains in the Genus database with same CATH superfamily
1N10A 1OA9A 1EU1A 5DYGA 3M3GA 2JA5A 4CRYG 3GTGA 1Y4ZA 2KQAA 3DMRA 3X2PA 2VPYA 1QDNA 3GTQA 3HU1A 1E61A 1Y5IA 1Y1VA 4JCWA 4KDIA 4JJOA 2IV2X 1WCMA 1PYUB 4D7ZB 3IR7A 1BW4A 3GTKA 4AAYA 2VUMA 4JP6A 1OA7A 1FDOA 3X2NA 2BH0A 3ENGA 3SUMA 4KDLA 3QQ7A 2JIQA 3X2LA 4AOKB 1E60A 5C18A 1TWFA 1IW7D 2PICA 1UHEA 2E7ZA 1SFOA 5EPPA 2B63A 2VPXA 5GLXA 1YNJD 2A6ED 4RV0A 1KQGA 5DYIA 2WAQA 3HU3A 4FG4A 5T5MD 3QC8A 4CRZA 2G6GA 1E18A 2NVYA 2Y0SA 1HD5A 2EEOB 3HU2A 5GM9A 4AVRA 4ENGA 5FTLA 2VPWA 3X2MA 2JIMA 1TWAA 3X2JA 1AA6A 4JS7A 3CZBA 2KI8A 3H0GA 1AW8B 2AE0X 2JA6A 1CZ4A 1PPYA 1PYQA 5GLFA 1QCSA 3HKZA 2JIOA 2YUJA 1G8KA 1WC2A 5FTNA 3X2IA 1TMOA 1TWGA 1R7RA 4GA6A 5T5ID 3SUKA 1WLFA 4FFTA 1R27A 2BE5D 5H4UA 1PQHA 5FTKA 2GAEA 5GLYA 1Y1WA 3GTOA 3SULA 1H5NA 1H0HA 1BW3A 3D30A 5FTJA 3GTLA 2R7ZA 1YLEA 4C2MA 4NOHA 1S3SA 4JP7A 3GTMA 2R92A 1OGYA 3O5AA 1ZYRD 3QWZA 2ENGA 1TWCA 4KO8A 2WB1A 4KLNA 2NVXA 1YNND 1UHDA 1I50A 3ML1A 3X2OA 1I3QA 5FTMA 3IR6A 3CF2A 3OUGA 2C45A 2JA7A 3X2HA 2JIRA 1VC3B 2HCZX 2NAPA 3QQ8A 3X2GA 5B6CA 5C1BA 2PJHB 2O5JD 1FDIA 2PMZA 2R93A 2NYAA 2CW0D 1G8JA 2A69D 1DMRA 4ZM7A 1PQEA 3FKIA 4DMRA 4FERA 4GA5A 1SIWA 3TM7B 4AONB 1Q16A 1TWHA 1PT0A 2JIPA 3X2KA 2E2IA 1E32A 3CQZA 2PNWA 1CR5A 2V45A 2PI8A 3PLXB 4L48A 2A68D 2VPZA 1PQFA 2A6HD 2DMRA 1KQFA 3TIWA 2G5DA 2E2HA 4CS0A 4QIWA 4KODA 3SUJA 2PJJA 2YU9A 4AYBA 1E5VA 4FG2A 3GTPA 1ZC1A 3IR5A 1CZ5A 1R9TA 1DMSA 1SMYD 2V3VA 3GTJA 1K83A 1L8FA 4AZDA 1PT1A
chains in the Genus database with same CATH topology
1N10A 1OA9A 3SULA 4ZM7A 5GLXA 1BW3A 3D30A 3M3GA 4FERA 2KQAA 3X2PA 4FG4A 3X2KA 2G6GA 4AVRA 1HD5A 4ENGA 5GM9A 2PNWA 4JP7A 3X2MA 2PI8A 4JCWA 4L48A 4JJOA 3X2JA 4JS7A 3CZBA 2ENGA 1BW4A 2AE0X 2G5DA 4JP6A 1OA7A 3X2OA 3SUJA 3X2NA 2PJJA 2BH0A 3ENGA 3SUMA 4FG2A 3X2LA 1WC2A 3X2IA 2GAEA 3SUKA 3X2HA 4FFTA 2PICA 5H4UA 3X2GA 1L8FA 2HCZX 5GLYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1N10 A;  1OA9 A;  3SUL A;  4ZM7 A;  5GLX A;  1BW3 A;  3D30 A;  3M3G A;  4FER A;  2KQA A;  3X2P A;  4FG4 A;  3X2K A;  2G6G A;  4AVR A;  1HD5 A;  4ENG A;  5GM9 A;  2PNW A;  4JP7 A;  3X2M A;  2PI8 A;  4JCW A;  4L48 A;  4JJO A;  3X2J A;  4JS7 A;  3CZB A;  2ENG A;  1BW4 A;  2AE0 X;  2G5D A;  4JP6 A;  1OA7 A;  3X2O A;  3SUJ A;  3X2N A;  2PJJ A;  2BH0 A;  3ENG A;  3SUM A;  4FG2 A;  3X2L A;  1WC2 A;  3X2I A;  2GAE A;  3SUK A;  3X2H A;  4FFT A;  2PIC A;  5H4U A;  3X2G A;  1L8F A;  2HCZ X;  5GLY A; 
#chains in the Genus database with same CATH topology
 1N10 A;  1OA9 A;  1EU1 A;  5DYG A;  3M3G A;  2JA5 A;  4CRY G;  3GTG A;  1Y4Z A;  2KQA A;  3DMR A;  3X2P A;  2VPY A;  1QDN A;  3GTQ A;  3HU1 A;  1E61 A;  1Y5I A;  1Y1V A;  4JCW A;  4KDI A;  4JJO A;  2IV2 X;  1WCM A;  1PYU B;  4D7Z B;  3IR7 A;  1BW4 A;  3GTK A;  4AAY A;  2VUM A;  4JP6 A;  1OA7 A;  1FDO A;  3X2N A;  2BH0 A;  3ENG A;  3SUM A;  4KDL A;  3QQ7 A;  2JIQ A;  3X2L A;  4AOK B;  1E60 A;  5C18 A;  1TWF A;  1IW7 D;  2PIC A;  1UHE A;  2E7Z A;  1SFO A;  5EPP A;  2B63 A;  2VPX A;  5GLX A;  1YNJ D;  2A6E D;  4RV0 A;  1KQG A;  5DYI A;  2WAQ A;  3HU3 A;  4FG4 A;  5T5M D;  3QC8 A;  4CRZ A;  2G6G A;  1E18 A;  2NVY A;  2Y0S A;  1HD5 A;  2EEO B;  3HU2 A;  5GM9 A;  4AVR A;  4ENG A;  5FTL A;  2VPW A;  3X2M A;  2JIM A;  1TWA A;  3X2J A;  1AA6 A;  4JS7 A;  3CZB A;  2KI8 A;  3H0G A;  1AW8 B;  2AE0 X;  2JA6 A;  1CZ4 A;  1PPY A;  1PYQ A;  5GLF A;  1QCS A;  3HKZ A;  2JIO A;  2YUJ A;  1G8K A;  1WC2 A;  5FTN A;  3X2I A;  1TMO A;  1TWG A;  1R7R A;  4GA6 A;  5T5I D;  3SUK A;  1WLF A;  4FFT A;  1R27 A;  2BE5 D;  5H4U A;  1PQH A;  5FTK A;  2GAE A;  5GLY A;  1Y1W A;  3GTO A;  3SUL A;  1H5N A;  1H0H A;  1BW3 A;  3D30 A;  5FTJ A;  3GTL A;  2R7Z A;  1YLE A;  4C2M A;  4NOH A;  1S3S A;  4JP7 A;  3GTM A;  2R92 A;  1OGY A;  3O5A A;  1ZYR D;  3QWZ A;  2ENG A;  1TWC A;  4KO8 A;  2WB1 A;  4KLN A;  2NVX A;  1YNN D;  1UHD A;  1I50 A;  3ML1 A;  3X2O A;  1I3Q A;  5FTM A;  3IR6 A;  3CF2 A;  3OUG A;  2C45 A;  2JA7 A;  3X2H A;  2JIR A;  1VC3 B;  2HCZ X;  2NAP A;  3QQ8 A;  3X2G A;  5B6C A;  5C1B A;  2PJH B;  2O5J D;  1FDI A;  2PMZ A;  2R93 A;  2NYA A;  2CW0 D;  1G8J A;  2A69 D;  1DMR A;  4ZM7 A;  1PQE A;  3FKI A;  4DMR A;  4FER A;  4GA5 A;  1SIW A;  3TM7 B;  4AON B;  1Q16 A;  1TWH A;  1PT0 A;  2JIP A;  3X2K A;  2E2I A;  1E32 A;  3CQZ A;  2PNW A;  1CR5 A;  2V45 A;  2PI8 A;  3PLX B;  4L48 A;  2A68 D;  2VPZ A;  1PQF A;  2A6H D;  2DMR A;  1KQF A;  3TIW A;  2G5D A;  2E2H A;  4CS0 A;  4QIW A;  4KOD A;  3SUJ A;  2PJJ A;  2YU9 A;  4AYB A;  1E5V A;  4FG2 A;  3GTP A;  1ZC1 A;  3IR5 A;  1CZ5 A;  1R9T A;  1DMS A;  1SMY D;  2V3V A;  3GTJ A;  1K83 A;  1L8F A;  4AZD A;  1PT1 A; 
#chains in the Genus database with same CATH homology
 1N10 A;  1OA9 A;  3SUL A;  4ZM7 A;  5GLX A;  1BW3 A;  3D30 A;  3M3G A;  4FER A;  2KQA A;  3X2P A;  4FG4 A;  3X2K A;  2G6G A;  4AVR A;  1HD5 A;  4ENG A;  5GM9 A;  2PNW A;  4JP7 A;  3X2M A;  2PI8 A;  4JCW A;  4L48 A;  4JJO A;  3X2J A;  4JS7 A;  3CZB A;  2ENG A;  1BW4 A;  2AE0 X;  2G5D A;  4JP6 A;  1OA7 A;  3X2O A;  3SUJ A;  3X2N A;  2PJJ A;  2BH0 A;  3ENG A;  3SUM A;  4FG2 A;  3X2L A;  1WC2 A;  3X2I A;  2GAE A;  3SUK A;  3X2H A;  4FFT A;  2PIC A;  5H4U A;  3X2G A;  1L8F A;  2HCZ X;  5GLY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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