3X2MA

X-ray structure of pccel45a with cellopentaose at 0.64 angstrom resolution.
Total Genus 48
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2mA00
5GLYA 3X2MA 2GAEA 3SUJA 1BW4A 2PICA 2KQAA 4AVRA 4JJOA 4L48A 3D30A 2G6GA 4JP6A 3X2HA 3X2KA 4JP7A 2BH0A 3M3GA 4FERA 2G5DA 1N10A 2HCZX 2PNWA 4FFTA 3X2PA 3X2JA 5GLXA 4FG2A 5H4UA 3ENGA 2AE0X 1OA9A 2PI8A 3X2IA 2PJJA 1WC2A 3X2NA 4ENGA 4FG4A 3X2GA 2ENGA 1L8FA 3CZBA 3X2OA 1OA7A 1HD5A 5GM9A 3SUKA 3X2LA 4JCWA 1BW3A 4ZM7A 3SUMA 4JS7A 3SULA
chains in the Genus database with same CATH superfamily
1Y1VA 5C18A 1SMYD 1YLEA 2JIPA 3SUJA 2PICA 3TM7B 2JIRA 1IW7D 2R92A 5T5MD 1E61A 3D30A 3CQZA 4JP6A 3X2HA 1PYQA 4JP7A 1CZ5A 5FTLA 3M3GA 1QCSA 4KO8A 5FTMA 2VPZA 1KQGA 2HCZX 3QQ8A 2PNWA 5C1BA 2V45A 3X2JA 2B63A 2VUMA 3DMRA 1PQHA 1SIWA 3O5AA 2E7ZA 4KLNA 1R9TA 1DMSA 5DYGA 3TIWA 3GTLA 3GTGA 1PT0A 2ENGA 2VPYA 1E5VA 4KDIA 2NVYA 4AONB 5B6CA 3GTJA 2O5JD 1YNJD 1AA6A 4C2MA 1CR5A 3SUMA 4JS7A 1UHDA 1WLFA 1E18A 2GAEA 3GTKA 2KQAA 2KI8A 5FTNA 3IR7A 2NVXA 1H5NA 4AVRA 4CRZA 1AW8B 2R93A 3QQ7A 1EU1A 2YU9A 1G8KA 2WAQA 4FERA 1PT1A 4KODA 5FTJA 3QWZA 1I3QA 4FFTA 4AAYA 3IR6A 3X2PA 5H4UA 4FG2A 2NAPA 2PI8A 2PJJA 3X2NA 1H0HA 4ENGA 2E2IA 1PQFA 4FG4A 5EPPA 1K83A 3IR5A 2A68D 1L8FA 2A6HD 1QDNA 1OA7A 4DMRA 1TWFA 1PPYA 2A69D 2Y0SA 3HU1A 1Y1WA 1BW4A 1R7RA 1FDIA 3GTPA 2DMRA 2C45A 3GTOA 3GTMA 4GA6A 2JA6A 1UHEA 2BH0A 1TWCA 5DYIA 2G5DA 1N10A 1WCMA 1G8JA 2CW0D 2PMZA 2E2HA 2JIOA 3GTQA 5GLXA 3ENGA 2AE0X 2YUJA 1E32A 1OA9A 3CF2A 1S3SA 2A6ED 1WC2A 1PQEA 1E60A 1R27A 3X2GA 2JIQA 4AZDA 3X2OA 4CS0A 1VC3B 1HD5A 2V3VA 3X2LA 3SUKA 2IV2X 3PLXB 3ML1A 2JA5A 5FTKA 4GA5A 4CRYG 5GLYA 2EEOB 1YNND 3HKZA 1TWAA 4NOHA 3X2MA 1Q16A 1ZYRD 2WB1A 4JJOA 2VPXA 4L48A 2G6GA 1TMOA 3FKIA 3X2KA 1KQFA 1FDOA 3HU3A 3HU2A 4KDLA 4D7ZB 2R7ZA 1TWHA 3QC8A 2JIMA 5T5ID 1ZC1A 4QIWA 4RV0A 4AOKB 2JA7A 1Y5IA 2VPWA 3X2IA 3OUGA 1Y4ZA 1SFOA 1DMRA 2PJHB 1OGYA 1CZ4A 3H0GA 1I50A 3CZBA 4AYBA 5GLFA 2NYAA 5GM9A 1PYUB 1TWGA 2BE5D 4JCWA 1BW3A 4ZM7A 3SULA
chains in the Genus database with same CATH topology
5GLYA 3X2MA 2GAEA 3SUJA 1BW4A 2PICA 2KQAA 4AVRA 4JJOA 4L48A 3D30A 2G6GA 4JP6A 3X2HA 3X2KA 4JP7A 2BH0A 3M3GA 4FERA 2G5DA 1N10A 2HCZX 2PNWA 4FFTA 3X2PA 3X2JA 5GLXA 4FG2A 5H4UA 3ENGA 2AE0X 1OA9A 2PI8A 3X2IA 2PJJA 1WC2A 3X2NA 4ENGA 4FG4A 3X2GA 2ENGA 1L8FA 3CZBA 3X2OA 1OA7A 1HD5A 5GM9A 3SUKA 3X2LA 4JCWA 1BW3A 4ZM7A 3SUMA 4JS7A 3SULA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5GLY A;  3X2M A;  2GAE A;  3SUJ A;  1BW4 A;  2PIC A;  2KQA A;  4AVR A;  4JJO A;  4L48 A;  3D30 A;  2G6G A;  4JP6 A;  3X2H A;  3X2K A;  4JP7 A;  2BH0 A;  3M3G A;  4FER A;  2G5D A;  1N10 A;  2HCZ X;  2PNW A;  4FFT A;  3X2P A;  3X2J A;  5GLX A;  4FG2 A;  5H4U A;  3ENG A;  2AE0 X;  1OA9 A;  2PI8 A;  3X2I A;  2PJJ A;  1WC2 A;  3X2N A;  4ENG A;  4FG4 A;  3X2G A;  2ENG A;  1L8F A;  3CZB A;  3X2O A;  1OA7 A;  1HD5 A;  5GM9 A;  3SUK A;  3X2L A;  4JCW A;  1BW3 A;  4ZM7 A;  3SUM A;  4JS7 A;  3SUL A; 
#chains in the Genus database with same CATH topology
 1Y1V A;  5C18 A;  1SMY D;  1YLE A;  2JIP A;  3SUJ A;  2PIC A;  3TM7 B;  2JIR A;  1IW7 D;  2R92 A;  5T5M D;  1E61 A;  3D30 A;  3CQZ A;  4JP6 A;  3X2H A;  1PYQ A;  4JP7 A;  1CZ5 A;  5FTL A;  3M3G A;  1QCS A;  4KO8 A;  5FTM A;  2VPZ A;  1KQG A;  2HCZ X;  3QQ8 A;  2PNW A;  5C1B A;  2V45 A;  3X2J A;  2B63 A;  2VUM A;  3DMR A;  1PQH A;  1SIW A;  3O5A A;  2E7Z A;  4KLN A;  1R9T A;  1DMS A;  5DYG A;  3TIW A;  3GTL A;  3GTG A;  1PT0 A;  2ENG A;  2VPY A;  1E5V A;  4KDI A;  2NVY A;  4AON B;  5B6C A;  3GTJ A;  2O5J D;  1YNJ D;  1AA6 A;  4C2M A;  1CR5 A;  3SUM A;  4JS7 A;  1UHD A;  1WLF A;  1E18 A;  2GAE A;  3GTK A;  2KQA A;  2KI8 A;  5FTN A;  3IR7 A;  2NVX A;  1H5N A;  4AVR A;  4CRZ A;  1AW8 B;  2R93 A;  3QQ7 A;  1EU1 A;  2YU9 A;  1G8K A;  2WAQ A;  4FER A;  1PT1 A;  4KOD A;  5FTJ A;  3QWZ A;  1I3Q A;  4FFT A;  4AAY A;  3IR6 A;  3X2P A;  5H4U A;  4FG2 A;  2NAP A;  2PI8 A;  2PJJ A;  3X2N A;  1H0H A;  4ENG A;  2E2I A;  1PQF A;  4FG4 A;  5EPP A;  1K83 A;  3IR5 A;  2A68 D;  1L8F A;  2A6H D;  1QDN A;  1OA7 A;  4DMR A;  1TWF A;  1PPY A;  2A69 D;  2Y0S A;  3HU1 A;  1Y1W A;  1BW4 A;  1R7R A;  1FDI A;  3GTP A;  2DMR A;  2C45 A;  3GTO A;  3GTM A;  4GA6 A;  2JA6 A;  1UHE A;  2BH0 A;  1TWC A;  5DYI A;  2G5D A;  1N10 A;  1WCM A;  1G8J A;  2CW0 D;  2PMZ A;  2E2H A;  2JIO A;  3GTQ A;  5GLX A;  3ENG A;  2AE0 X;  2YUJ A;  1E32 A;  1OA9 A;  3CF2 A;  1S3S A;  2A6E D;  1WC2 A;  1PQE A;  1E60 A;  1R27 A;  3X2G A;  2JIQ A;  4AZD A;  3X2O A;  4CS0 A;  1VC3 B;  1HD5 A;  2V3V A;  3X2L A;  3SUK A;  2IV2 X;  3PLX B;  3ML1 A;  2JA5 A;  5FTK A;  4GA5 A;  4CRY G;  5GLY A;  2EEO B;  1YNN D;  3HKZ A;  1TWA A;  4NOH A;  3X2M A;  1Q16 A;  1ZYR D;  2WB1 A;  4JJO A;  2VPX A;  4L48 A;  2G6G A;  1TMO A;  3FKI A;  3X2K A;  1KQF A;  1FDO A;  3HU3 A;  3HU2 A;  4KDL A;  4D7Z B;  2R7Z A;  1TWH A;  3QC8 A;  2JIM A;  5T5I D;  1ZC1 A;  4QIW A;  4RV0 A;  4AOK B;  2JA7 A;  1Y5I A;  2VPW A;  3X2I A;  3OUG A;  1Y4Z A;  1SFO A;  1DMR A;  2PJH B;  1OGY A;  1CZ4 A;  3H0G A;  1I50 A;  3CZB A;  4AYB A;  5GLF A;  2NYA A;  5GM9 A;  1PYU B;  1TWG A;  2BE5 D;  4JCW A;  1BW3 A;  4ZM7 A;  3SUL A; 
#chains in the Genus database with same CATH homology
 5GLY A;  3X2M A;  2GAE A;  3SUJ A;  1BW4 A;  2PIC A;  2KQA A;  4AVR A;  4JJO A;  4L48 A;  3D30 A;  2G6G A;  4JP6 A;  3X2H A;  3X2K A;  4JP7 A;  2BH0 A;  3M3G A;  4FER A;  2G5D A;  1N10 A;  2HCZ X;  2PNW A;  4FFT A;  3X2P A;  3X2J A;  5GLX A;  4FG2 A;  5H4U A;  3ENG A;  2AE0 X;  1OA9 A;  2PI8 A;  3X2I A;  2PJJ A;  1WC2 A;  3X2N A;  4ENG A;  4FG4 A;  3X2G A;  2ENG A;  1L8F A;  3CZB A;  3X2O A;  1OA7 A;  1HD5 A;  5GM9 A;  3SUK A;  3X2L A;  4JCW A;  1BW3 A;  4ZM7 A;  3SUM A;  4JS7 A;  3SUL A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...