3X2MA

X-ray structure of pccel45a with cellopentaose at 0.64 angstrom resolution.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2mA00
4ZM7A 2PNWA 2GAEA 4JCWA 3X2KA 4JS7A 4FG4A 1L8FA 1N10A 4L48A 2G5DA 2BH0A 1HD5A 4JP7A 3X2GA 3SUJA 2AE0X 4FERA 1WC2A 4FG2A 1BW4A 3ENGA 2PJJA 1OA7A 4JJOA 3SUMA 2PI8A 3M3GA 3SULA 2ENGA 5GM9A 3CZBA 3X2IA 5H4UA 3SUKA 2KQAA 1OA9A 2PICA 3X2JA 3X2OA 2G6GA 3X2HA 3D30A 4AVRA 3X2MA 4JP6A 3X2NA 1BW3A 5GLXA 4FFTA 3X2PA 3X2LA 4ENGA 2HCZX 5GLYA
chains in the Genus database with same CATH superfamily
2O5JD 2GAEA 3TM7B 1DMRA 3GTMA 3GTJA 4DMRA 3GTOA 3CF2A 1TWFA 2V3VA 2BH0A 4JP7A 5T5ID 2JA7A 1E60A 2VPXA 4GA5A 1H0HA 3ENGA 4D7ZB 5FTMA 1KQFA 3SULA 5GM9A 3O5AA 2JIQA 3QWZA 5FTKA 3OUGA 1Q16A 3ML1A 2EEOB 2PICA 1E32A 3HU2A 3GTGA 4AZDA 4KODA 5DYIA 5GLXA 1PQFA 3IR5A 3PLXB 3X2LA 1DMSA 5T5MD 1QDNA 1QCSA 1ZC1A 5EPPA 2R92A 4QIWA 2C45A 1TMOA 4AVRA 4ZM7A 2E2IA 2JIRA 2JA6A 3DMRA 4AYBA 3QQ7A 1N10A 4L48A 4AOKB 1HD5A 4GA6A 2VUMA 1CZ4A 2WB1A 1PT1A 2AE0X 3GTKA 1WC2A 2A69D 1R27A 3FKIA 1VC3B 4FG2A 4CS0A 1EU1A 4KO8A 2Y0SA 4CRYG 3SUMA 2IV2X 2PI8A 2VPZA 1SFOA 3HU3A 1OGYA 2BE5D 4AONB 3CZBA 4AAYA 3HKZA 3X2IA 5H4UA 3X2JA 1PQEA 1WCMA 3X2OA 1CZ5A 3HU1A 1ZYRD 2G6GA 3D30A 1AW8B 1IW7D 3X2MA 3X2NA 1E5VA 3X2PA 1TWGA 1YLEA 4KLNA 5GLYA 2PNWA 2E2HA 3X2KA 1FDOA 2NAPA 2YUJA 1L8FA 4FG4A 4KDLA 3IR7A 3QQ8A 1SIWA 1E18A 5C1BA 1TWAA 1R9TA 1YNND 2A6HD 4C2MA 1I50A 4FERA 2B63A 1UHDA 1YNJD 2R7ZA 2PJJA 1G8JA 1FDIA 1OA7A 2JIMA 4JJOA 1AA6A 3GTLA 3GTQA 2JA5A 4NOHA 1H5NA 5FTNA 2KQAA 1OA9A 1TWCA 2YU9A 2JIOA 1I3QA 1E61A 1PQHA 3CQZA 1KQGA 1BW3A 4JP6A 1G8KA 3GTPA 3H0GA 4ENGA 2JIPA 3SUJA 2NYAA 2DMRA 1PT0A 1PPYA 2PJHB 4JCWA 4RV0A 4JS7A 2G5DA 2VPWA 1R7RA 5C18A 5FTLA 1Y5IA 2NVXA 5B6CA 3X2GA 2R93A 1CR5A 1PYUB 1UHEA 1Y1VA 1Y4ZA 5DYGA 4CRZA 1Y1WA 4KDIA 1BW4A 2VPYA 5GLFA 3TIWA 1SMYD 2A6ED 3M3GA 2ENGA 2V45A 1K83A 2PMZA 3QC8A 3SUKA 2KI8A 2WAQA 5FTJA 3X2HA 1TWHA 3IR6A 2CW0D 1S3SA 1PYQA 4FFTA 2A68D 2NVYA 1WLFA 2E7ZA 2HCZX
chains in the Genus database with same CATH topology
4ZM7A 2PNWA 2GAEA 4JCWA 3X2KA 4JS7A 4FG4A 1L8FA 1N10A 4L48A 2G5DA 2BH0A 1HD5A 4JP7A 3X2GA 3SUJA 2AE0X 4FERA 1WC2A 4FG2A 1BW4A 3ENGA 2PJJA 1OA7A 4JJOA 3SUMA 2PI8A 3M3GA 3SULA 2ENGA 5GM9A 3CZBA 3X2IA 5H4UA 3SUKA 2KQAA 1OA9A 2PICA 3X2JA 3X2OA 2G6GA 3X2HA 3D30A 4AVRA 3X2MA 4JP6A 3X2NA 1BW3A 5GLXA 4FFTA 3X2PA 3X2LA 4ENGA 2HCZX 5GLYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZM7 A;  2PNW A;  2GAE A;  4JCW A;  3X2K A;  4JS7 A;  4FG4 A;  1L8F A;  1N10 A;  4L48 A;  2G5D A;  2BH0 A;  1HD5 A;  4JP7 A;  3X2G A;  3SUJ A;  2AE0 X;  4FER A;  1WC2 A;  4FG2 A;  1BW4 A;  3ENG A;  2PJJ A;  1OA7 A;  4JJO A;  3SUM A;  2PI8 A;  3M3G A;  3SUL A;  2ENG A;  5GM9 A;  3CZB A;  3X2I A;  5H4U A;  3SUK A;  2KQA A;  1OA9 A;  2PIC A;  3X2J A;  3X2O A;  2G6G A;  3X2H A;  3D30 A;  4AVR A;  3X2M A;  4JP6 A;  3X2N A;  1BW3 A;  5GLX A;  4FFT A;  3X2P A;  3X2L A;  4ENG A;  2HCZ X;  5GLY A; 
#chains in the Genus database with same CATH topology
 2O5J D;  2GAE A;  3TM7 B;  1DMR A;  3GTM A;  3GTJ A;  4DMR A;  3GTO A;  3CF2 A;  1TWF A;  2V3V A;  2BH0 A;  4JP7 A;  5T5I D;  2JA7 A;  1E60 A;  2VPX A;  4GA5 A;  1H0H A;  3ENG A;  4D7Z B;  5FTM A;  1KQF A;  3SUL A;  5GM9 A;  3O5A A;  2JIQ A;  3QWZ A;  5FTK A;  3OUG A;  1Q16 A;  3ML1 A;  2EEO B;  2PIC A;  1E32 A;  3HU2 A;  3GTG A;  4AZD A;  4KOD A;  5DYI A;  5GLX A;  1PQF A;  3IR5 A;  3PLX B;  3X2L A;  1DMS A;  5T5M D;  1QDN A;  1QCS A;  1ZC1 A;  5EPP A;  2R92 A;  4QIW A;  2C45 A;  1TMO A;  4AVR A;  4ZM7 A;  2E2I A;  2JIR A;  2JA6 A;  3DMR A;  4AYB A;  3QQ7 A;  1N10 A;  4L48 A;  4AOK B;  1HD5 A;  4GA6 A;  2VUM A;  1CZ4 A;  2WB1 A;  1PT1 A;  2AE0 X;  3GTK A;  1WC2 A;  2A69 D;  1R27 A;  3FKI A;  1VC3 B;  4FG2 A;  4CS0 A;  1EU1 A;  4KO8 A;  2Y0S A;  4CRY G;  3SUM A;  2IV2 X;  2PI8 A;  2VPZ A;  1SFO A;  3HU3 A;  1OGY A;  2BE5 D;  4AON B;  3CZB A;  4AAY A;  3HKZ A;  3X2I A;  5H4U A;  3X2J A;  1PQE A;  1WCM A;  3X2O A;  1CZ5 A;  3HU1 A;  1ZYR D;  2G6G A;  3D30 A;  1AW8 B;  1IW7 D;  3X2M A;  3X2N A;  1E5V A;  3X2P A;  1TWG A;  1YLE A;  4KLN A;  5GLY A;  2PNW A;  2E2H A;  3X2K A;  1FDO A;  2NAP A;  2YUJ A;  1L8F A;  4FG4 A;  4KDL A;  3IR7 A;  3QQ8 A;  1SIW A;  1E18 A;  5C1B A;  1TWA A;  1R9T A;  1YNN D;  2A6H D;  4C2M A;  1I50 A;  4FER A;  2B63 A;  1UHD A;  1YNJ D;  2R7Z A;  2PJJ A;  1G8J A;  1FDI A;  1OA7 A;  2JIM A;  4JJO A;  1AA6 A;  3GTL A;  3GTQ A;  2JA5 A;  4NOH A;  1H5N A;  5FTN A;  2KQA A;  1OA9 A;  1TWC A;  2YU9 A;  2JIO A;  1I3Q A;  1E61 A;  1PQH A;  3CQZ A;  1KQG A;  1BW3 A;  4JP6 A;  1G8K A;  3GTP A;  3H0G A;  4ENG A;  2JIP A;  3SUJ A;  2NYA A;  2DMR A;  1PT0 A;  1PPY A;  2PJH B;  4JCW A;  4RV0 A;  4JS7 A;  2G5D A;  2VPW A;  1R7R A;  5C18 A;  5FTL A;  1Y5I A;  2NVX A;  5B6C A;  3X2G A;  2R93 A;  1CR5 A;  1PYU B;  1UHE A;  1Y1V A;  1Y4Z A;  5DYG A;  4CRZ A;  1Y1W A;  4KDI A;  1BW4 A;  2VPY A;  5GLF A;  3TIW A;  1SMY D;  2A6E D;  3M3G A;  2ENG A;  2V45 A;  1K83 A;  2PMZ A;  3QC8 A;  3SUK A;  2KI8 A;  2WAQ A;  5FTJ A;  3X2H A;  1TWH A;  3IR6 A;  2CW0 D;  1S3S A;  1PYQ A;  4FFT A;  2A68 D;  2NVY A;  1WLF A;  2E7Z A;  2HCZ X; 
#chains in the Genus database with same CATH homology
 4ZM7 A;  2PNW A;  2GAE A;  4JCW A;  3X2K A;  4JS7 A;  4FG4 A;  1L8F A;  1N10 A;  4L48 A;  2G5D A;  2BH0 A;  1HD5 A;  4JP7 A;  3X2G A;  3SUJ A;  2AE0 X;  4FER A;  1WC2 A;  4FG2 A;  1BW4 A;  3ENG A;  2PJJ A;  1OA7 A;  4JJO A;  3SUM A;  2PI8 A;  3M3G A;  3SUL A;  2ENG A;  5GM9 A;  3CZB A;  3X2I A;  5H4U A;  3SUK A;  2KQA A;  1OA9 A;  2PIC A;  3X2J A;  3X2O A;  2G6G A;  3X2H A;  3D30 A;  4AVR A;  3X2M A;  4JP6 A;  3X2N A;  1BW3 A;  5GLX A;  4FFT A;  3X2P A;  3X2L A;  4ENG A;  2HCZ X;  5GLY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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