3X2MA

X-ray structure of pccel45a with cellopentaose at 0.64 angstrom resolution.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
molecule keywords Endoglucanase V-like protein
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2mA00
5GLYA 1BW3A 2BH0A 2G6GA 2GAEA 3SUJA 4JCWA 3X2KA 4ENGA 4AVRA 2AE0X 3X2NA 1N10A 1HD5A 3ENGA 3X2PA 4JS7A 2PJJA 1L8FA 2ENGA 2HCZX 1OA9A 4FFTA 4FG2A 3X2OA 3SUKA 2KQAA 5GLXA 4FG4A 4JP7A 3CZBA 1BW4A 4ZM7A 3X2LA 4FERA 4JJOA 1OA7A 3M3GA 2PI8A 4JP6A 4L48A 5GM9A 3X2JA 1WC2A 2G5DA 3SULA 5H4UA 3D30A 3SUMA 3X2HA 3X2GA 3X2IA 3X2MA 2PICA 2PNWA
chains in the Genus database with same CATH superfamily
2JIMA 1UHDA 1TWFA 2G6GA 2JIOA 5FTNA 2YU9A 3GTKA 2O5JD 4ENGA 4AVRA 1TWCA 1TMOA 3ML1A 2PJHB 1PPYA 3GTLA 5DYIA 1UHEA 4AAYA 2B63A 1Y1VA 4KLNA 1Y1WA 1L8FA 2ENGA 1PQHA 2JIRA 1TWHA 4FFTA 4AONB 2KQAA 4RV0A 3GTQA 5GLXA 4JP7A 3CZBA 3OUGA 2R7ZA 1TWGA 2JA7A 1VC3B 3M3GA 2PI8A 1PQEA 1WC2A 2JIQA 3SULA 3SUMA 3HU1A 3X2HA 4CS0A 5FTMA 3X2IA 4DMRA 1KQFA 4AZDA 3FKIA 1CR5A 2AE0X 1AA6A 1Q16A 1YLEA 3CF2A 1HD5A 1WCMA 3ENGA 3GTPA 2R92A 2PJJA 2NAPA 3QQ7A 3QQ8A 1OA9A 4FG2A 1WLFA 3PLXB 4C2MA 1PQFA 2A68D 1E32A 2PMZA 1ZC1A 3QC8A 4GA6A 1E18A 1FDIA 4KDIA 3O5AA 2R93A 5DYGA 4ZM7A 1K83A 1DMSA 3TM7B 4AOKB 2E2IA 1CZ4A 5C1BA 3X2GA 4GA5A 4D7ZB 1OGYA 2KI8A 3X2PA 3GTJA 2NVYA 2A6ED 2Y0SA 5GLYA 1H0HA 2GAEA 2NYAA 4CRYG 1IW7D 1E60A 2BE5D 3GTMA 3TIWA 2E7ZA 3X2NA 1H5NA 1I50A 3IR6A 1G8JA 4KODA 2A69D 3HKZA 5FTLA 2JA5A 1R7RA 4JS7A 2E2HA 2JA6A 1DMRA 5EPPA 2EEOB 2HCZX 2VPZA 3X2OA 2WB1A 3GTOA 3CQZA 1S3SA 3HU3A 1BW4A 1Y5IA 3X2LA 4CRZA 4JJOA 1OA7A 1PT1A 4JP6A 4KDLA 5FTJA 1CZ5A 1YNND 1G8KA 2G5DA 1TWAA 1R27A 3D30A 1SIWA 2VPWA 5H4UA 2JIPA 1R9TA 2A6HD 2YUJA 1EU1A 3X2MA 1FDOA 2PICA 1I3QA 2NVXA 3QWZA 2BH0A 2VUMA 3SUJA 4JCWA 1Y4ZA 5C18A 3X2KA 1E5VA 1N10A 1PT0A 1PYQA 5FTKA 1SMYD 4KO8A 4QIWA 3GTGA 3H0GA 5T5MD 1QDNA 5T5ID 2IV2X 1SFOA 5GLFA 3SUKA 2WAQA 1AW8B 2VPXA 3IR7A 4FG4A 4AYBA 2C45A 2CW0D 1ZYRD 2VPYA 4FERA 1YNJD 2DMRA 1E61A 4L48A 1KQGA 1QCSA 3HU2A 3IR5A 5GM9A 4NOHA 1PYUB 3DMRA 3X2JA 5B6CA 2V45A 2V3VA 1BW3A 2PNWA
chains in the Genus database with same CATH topology
5GLYA 1BW3A 2BH0A 2G6GA 2GAEA 3SUJA 4JCWA 3X2KA 4ENGA 4AVRA 2AE0X 3X2NA 1N10A 1HD5A 3ENGA 3X2PA 4JS7A 2PJJA 1L8FA 2ENGA 2HCZX 1OA9A 4FFTA 4FG2A 3X2OA 3SUKA 2KQAA 5GLXA 4FG4A 4JP7A 3CZBA 1BW4A 4ZM7A 3X2LA 4FERA 4JJOA 1OA7A 3M3GA 2PI8A 4JP6A 4L48A 5GM9A 3X2JA 1WC2A 2G5DA 3SULA 5H4UA 3D30A 3SUMA 3X2HA 3X2GA 3X2IA 3X2MA 2PICA 2PNWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5GLY A;  1BW3 A;  2BH0 A;  2G6G A;  2GAE A;  3SUJ A;  4JCW A;  3X2K A;  4ENG A;  4AVR A;  2AE0 X;  3X2N A;  1N10 A;  1HD5 A;  3ENG A;  3X2P A;  4JS7 A;  2PJJ A;  1L8F A;  2ENG A;  2HCZ X;  1OA9 A;  4FFT A;  4FG2 A;  3X2O A;  3SUK A;  2KQA A;  5GLX A;  4FG4 A;  4JP7 A;  3CZB A;  1BW4 A;  4ZM7 A;  3X2L A;  4FER A;  4JJO A;  1OA7 A;  3M3G A;  2PI8 A;  4JP6 A;  4L48 A;  5GM9 A;  3X2J A;  1WC2 A;  2G5D A;  3SUL A;  5H4U A;  3D30 A;  3SUM A;  3X2H A;  3X2G A;  3X2I A;  3X2M A;  2PIC A;  2PNW A; 
#chains in the Genus database with same CATH topology
 2JIM A;  1UHD A;  1TWF A;  2G6G A;  2JIO A;  5FTN A;  2YU9 A;  3GTK A;  2O5J D;  4ENG A;  4AVR A;  1TWC A;  1TMO A;  3ML1 A;  2PJH B;  1PPY A;  3GTL A;  5DYI A;  1UHE A;  4AAY A;  2B63 A;  1Y1V A;  4KLN A;  1Y1W A;  1L8F A;  2ENG A;  1PQH A;  2JIR A;  1TWH A;  4FFT A;  4AON B;  2KQA A;  4RV0 A;  3GTQ A;  5GLX A;  4JP7 A;  3CZB A;  3OUG A;  2R7Z A;  1TWG A;  2JA7 A;  1VC3 B;  3M3G A;  2PI8 A;  1PQE A;  1WC2 A;  2JIQ A;  3SUL A;  3SUM A;  3HU1 A;  3X2H A;  4CS0 A;  5FTM A;  3X2I A;  4DMR A;  1KQF A;  4AZD A;  3FKI A;  1CR5 A;  2AE0 X;  1AA6 A;  1Q16 A;  1YLE A;  3CF2 A;  1HD5 A;  1WCM A;  3ENG A;  3GTP A;  2R92 A;  2PJJ A;  2NAP A;  3QQ7 A;  3QQ8 A;  1OA9 A;  4FG2 A;  1WLF A;  3PLX B;  4C2M A;  1PQF A;  2A68 D;  1E32 A;  2PMZ A;  1ZC1 A;  3QC8 A;  4GA6 A;  1E18 A;  1FDI A;  4KDI A;  3O5A A;  2R93 A;  5DYG A;  4ZM7 A;  1K83 A;  1DMS A;  3TM7 B;  4AOK B;  2E2I A;  1CZ4 A;  5C1B A;  3X2G A;  4GA5 A;  4D7Z B;  1OGY A;  2KI8 A;  3X2P A;  3GTJ A;  2NVY A;  2A6E D;  2Y0S A;  5GLY A;  1H0H A;  2GAE A;  2NYA A;  4CRY G;  1IW7 D;  1E60 A;  2BE5 D;  3GTM A;  3TIW A;  2E7Z A;  3X2N A;  1H5N A;  1I50 A;  3IR6 A;  1G8J A;  4KOD A;  2A69 D;  3HKZ A;  5FTL A;  2JA5 A;  1R7R A;  4JS7 A;  2E2H A;  2JA6 A;  1DMR A;  5EPP A;  2EEO B;  2HCZ X;  2VPZ A;  3X2O A;  2WB1 A;  3GTO A;  3CQZ A;  1S3S A;  3HU3 A;  1BW4 A;  1Y5I A;  3X2L A;  4CRZ A;  4JJO A;  1OA7 A;  1PT1 A;  4JP6 A;  4KDL A;  5FTJ A;  1CZ5 A;  1YNN D;  1G8K A;  2G5D A;  1TWA A;  1R27 A;  3D30 A;  1SIW A;  2VPW A;  5H4U A;  2JIP A;  1R9T A;  2A6H D;  2YUJ A;  1EU1 A;  3X2M A;  1FDO A;  2PIC A;  1I3Q A;  2NVX A;  3QWZ A;  2BH0 A;  2VUM A;  3SUJ A;  4JCW A;  1Y4Z A;  5C18 A;  3X2K A;  1E5V A;  1N10 A;  1PT0 A;  1PYQ A;  5FTK A;  1SMY D;  4KO8 A;  4QIW A;  3GTG A;  3H0G A;  5T5M D;  1QDN A;  5T5I D;  2IV2 X;  1SFO A;  5GLF A;  3SUK A;  2WAQ A;  1AW8 B;  2VPX A;  3IR7 A;  4FG4 A;  4AYB A;  2C45 A;  2CW0 D;  1ZYR D;  2VPY A;  4FER A;  1YNJ D;  2DMR A;  1E61 A;  4L48 A;  1KQG A;  1QCS A;  3HU2 A;  3IR5 A;  5GM9 A;  4NOH A;  1PYU B;  3DMR A;  3X2J A;  5B6C A;  2V45 A;  2V3V A;  1BW3 A;  2PNW A; 
#chains in the Genus database with same CATH homology
 5GLY A;  1BW3 A;  2BH0 A;  2G6G A;  2GAE A;  3SUJ A;  4JCW A;  3X2K A;  4ENG A;  4AVR A;  2AE0 X;  3X2N A;  1N10 A;  1HD5 A;  3ENG A;  3X2P A;  4JS7 A;  2PJJ A;  1L8F A;  2ENG A;  2HCZ X;  1OA9 A;  4FFT A;  4FG2 A;  3X2O A;  3SUK A;  2KQA A;  5GLX A;  4FG4 A;  4JP7 A;  3CZB A;  1BW4 A;  4ZM7 A;  3X2L A;  4FER A;  4JJO A;  1OA7 A;  3M3G A;  2PI8 A;  4JP6 A;  4L48 A;  5GM9 A;  3X2J A;  1WC2 A;  2G5D A;  3SUL A;  5H4U A;  3D30 A;  3SUM A;  3X2H A;  3X2G A;  3X2I A;  3X2M A;  2PIC A;  2PNW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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