3X2MA

X-ray structure of pccel45a with cellopentaose at 0.64 angstrom resolution.
Total Genus 48
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Endoglucanase V-like protein
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2mA00
2HCZX 4L48A 2PICA 4JCWA 2G5DA 3X2PA 3SUMA 2ENGA 3CZBA 4FG4A 4JP7A 4FERA 2AE0X 5GM9A 5GLYA 3X2HA 3X2IA 3ENGA 1N10A 3M3GA 3X2JA 1L8FA 3SUKA 1OA7A 3X2NA 3X2LA 4JS7A 4JP6A 3X2GA 2PJJA 1OA9A 3SUJA 5GLXA 5H4UA 3X2KA 1BW3A 4AVRA 2PI8A 4JJOA 3X2MA 3D30A 3X2OA 4ZM7A 1WC2A 3SULA 2KQAA 2BH0A 1BW4A 4ENGA 4FFTA 1HD5A 4FG2A 2PNWA 2G6GA 2GAEA
chains in the Genus database with same CATH superfamily
4L48A 3X2PA 4KDLA 5FTNA 4JP7A 1TWCA 4FG4A 1H0HA 1UHDA 1PQFA 1QDNA 4KO8A 1G8JA 3TIWA 5FTMA 1CZ5A 5DYGA 5GLYA 4KLNA 1I3QA 2YU9A 1SIWA 4KDIA 4RV0A 3CF2A 1WCMA 2IV2X 1L8FA 2V3VA 2A69D 1OA7A 1PYUB 4GA6A 3OUGA 3X2GA 1CZ4A 2PJJA 2VUMA 5B6CA 1YLEA 5GLXA 1KQFA 2VPXA 3GTLA 1ZC1A 3GTQA 4GA5A 4CRYG 2JIMA 4AZDA 1WC2A 5FTKA 3TM7B 2BH0A 1E18A 3HU1A 3FKIA 1PT0A 1HD5A 1UHEA 3QWZA 3X2IA 4ENGA 3GTJA 3SUMA 2ENGA 3CZBA 3ML1A 4QIWA 4DMRA 1SMYD 2PJHB 2AE0X 5T5ID 5GM9A 3X2HA 4AYBA 1K83A 2VPZA 1N10A 2O5JD 2YUJA 3X2JA 1FDIA 3SUKA 1TWGA 1TWHA 3DMRA 3HU2A 1E5VA 1Q16A 1OA9A 1PQHA 1VC3B 5EPPA 3CQZA 2JIPA 1QCSA 1BW3A 1FDOA 4AVRA 1SFOA 2NAPA 3X2OA 3GTKA 3GTOA 1PYQA 2DMRA 5FTLA 2G6GA 1PT1A 2GAEA 3HKZA 2HCZX 1TWAA 5DYIA 4CS0A 4AOKB 2R92A 2JA7A 1DMRA 1CR5A 4CRZA 2JA5A 4AAYA 2CW0D 2VPYA 1R9TA 2JIOA 2EEOB 1G8KA 3X2LA 1I50A 3QQ7A 4JP6A 1KQGA 2JA6A 3SUJA 1PQEA 1IW7D 3IR5A 1TWFA 5T5MD 2NVYA 5H4UA 4D7ZB 3X2KA 2R7ZA 5FTJA 3QC8A 1R27A 3X2MA 3D30A 1YNND 3IR6A 2BE5D 2V45A 4NOHA 2KQAA 4KODA 5GLFA 2A68D 2NYAA 4FFTA 4FG2A 2PNWA 1S3SA 1OGYA 1AW8B 2PICA 4JCWA 2G5DA 2KI8A 2JIRA 1Y1VA 1E61A 3IR7A 2Y0SA 5C1BA 1DMSA 4FERA 2E7ZA 1WLFA 1EU1A 2VPWA 1ZYRD 3GTMA 1Y5IA 3GTPA 2NVXA 1E32A 2B63A 3O5AA 5C18A 3ENGA 1H5NA 3HU3A 4AONB 2WAQA 3M3GA 2E2IA 2JIQA 2PMZA 3QQ8A 3X2NA 4JS7A 3GTGA 2R93A 1YNJD 1Y4ZA 3PLXB 2A6ED 1TMOA 1E60A 4JJOA 1PPYA 4ZM7A 3SULA 1R7RA 2A6HD 1AA6A 3H0GA 1BW4A 2E2HA 2PI8A 2WB1A 1Y1WA 4C2MA 2C45A
chains in the Genus database with same CATH topology
2HCZX 4L48A 2PICA 4JCWA 2G5DA 3X2PA 3SUMA 2ENGA 3CZBA 4FG4A 4JP7A 4FERA 2AE0X 5GM9A 5GLYA 3X2HA 3X2IA 3ENGA 1N10A 3M3GA 3X2JA 1L8FA 3SUKA 1OA7A 3X2NA 3X2LA 4JS7A 4JP6A 3X2GA 2PJJA 1OA9A 3SUJA 5GLXA 5H4UA 3X2KA 1BW3A 4AVRA 2PI8A 4JJOA 3X2MA 3D30A 3X2OA 4ZM7A 1WC2A 3SULA 2KQAA 2BH0A 1BW4A 4ENGA 4FFTA 1HD5A 4FG2A 2PNWA 2G6GA 2GAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HCZ X;  4L48 A;  2PIC A;  4JCW A;  2G5D A;  3X2P A;  3SUM A;  2ENG A;  3CZB A;  4FG4 A;  4JP7 A;  4FER A;  2AE0 X;  5GM9 A;  5GLY A;  3X2H A;  3X2I A;  3ENG A;  1N10 A;  3M3G A;  3X2J A;  1L8F A;  3SUK A;  1OA7 A;  3X2N A;  3X2L A;  4JS7 A;  4JP6 A;  3X2G A;  2PJJ A;  1OA9 A;  3SUJ A;  5GLX A;  5H4U A;  3X2K A;  1BW3 A;  4AVR A;  2PI8 A;  4JJO A;  3X2M A;  3D30 A;  3X2O A;  4ZM7 A;  1WC2 A;  3SUL A;  2KQA A;  2BH0 A;  1BW4 A;  4ENG A;  4FFT A;  1HD5 A;  4FG2 A;  2PNW A;  2G6G A;  2GAE A; 
#chains in the Genus database with same CATH topology
 4L48 A;  3X2P A;  4KDL A;  5FTN A;  4JP7 A;  1TWC A;  4FG4 A;  1H0H A;  1UHD A;  1PQF A;  1QDN A;  4KO8 A;  1G8J A;  3TIW A;  5FTM A;  1CZ5 A;  5DYG A;  5GLY A;  4KLN A;  1I3Q A;  2YU9 A;  1SIW A;  4KDI A;  4RV0 A;  3CF2 A;  1WCM A;  2IV2 X;  1L8F A;  2V3V A;  2A69 D;  1OA7 A;  1PYU B;  4GA6 A;  3OUG A;  3X2G A;  1CZ4 A;  2PJJ A;  2VUM A;  5B6C A;  1YLE A;  5GLX A;  1KQF A;  2VPX A;  3GTL A;  1ZC1 A;  3GTQ A;  4GA5 A;  4CRY G;  2JIM A;  4AZD A;  1WC2 A;  5FTK A;  3TM7 B;  2BH0 A;  1E18 A;  3HU1 A;  3FKI A;  1PT0 A;  1HD5 A;  1UHE A;  3QWZ A;  3X2I A;  4ENG A;  3GTJ A;  3SUM A;  2ENG A;  3CZB A;  3ML1 A;  4QIW A;  4DMR A;  1SMY D;  2PJH B;  2AE0 X;  5T5I D;  5GM9 A;  3X2H A;  4AYB A;  1K83 A;  2VPZ A;  1N10 A;  2O5J D;  2YUJ A;  3X2J A;  1FDI A;  3SUK A;  1TWG A;  1TWH A;  3DMR A;  3HU2 A;  1E5V A;  1Q16 A;  1OA9 A;  1PQH A;  1VC3 B;  5EPP A;  3CQZ A;  2JIP A;  1QCS A;  1BW3 A;  1FDO A;  4AVR A;  1SFO A;  2NAP A;  3X2O A;  3GTK A;  3GTO A;  1PYQ A;  2DMR A;  5FTL A;  2G6G A;  1PT1 A;  2GAE A;  3HKZ A;  2HCZ X;  1TWA A;  5DYI A;  4CS0 A;  4AOK B;  2R92 A;  2JA7 A;  1DMR A;  1CR5 A;  4CRZ A;  2JA5 A;  4AAY A;  2CW0 D;  2VPY A;  1R9T A;  2JIO A;  2EEO B;  1G8K A;  3X2L A;  1I50 A;  3QQ7 A;  4JP6 A;  1KQG A;  2JA6 A;  3SUJ A;  1PQE A;  1IW7 D;  3IR5 A;  1TWF A;  5T5M D;  2NVY A;  5H4U A;  4D7Z B;  3X2K A;  2R7Z A;  5FTJ A;  3QC8 A;  1R27 A;  3X2M A;  3D30 A;  1YNN D;  3IR6 A;  2BE5 D;  2V45 A;  4NOH A;  2KQA A;  4KOD A;  5GLF A;  2A68 D;  2NYA A;  4FFT A;  4FG2 A;  2PNW A;  1S3S A;  1OGY A;  1AW8 B;  2PIC A;  4JCW A;  2G5D A;  2KI8 A;  2JIR A;  1Y1V A;  1E61 A;  3IR7 A;  2Y0S A;  5C1B A;  1DMS A;  4FER A;  2E7Z A;  1WLF A;  1EU1 A;  2VPW A;  1ZYR D;  3GTM A;  1Y5I A;  3GTP A;  2NVX A;  1E32 A;  2B63 A;  3O5A A;  5C18 A;  3ENG A;  1H5N A;  3HU3 A;  4AON B;  2WAQ A;  3M3G A;  2E2I A;  2JIQ A;  2PMZ A;  3QQ8 A;  3X2N A;  4JS7 A;  3GTG A;  2R93 A;  1YNJ D;  1Y4Z A;  3PLX B;  2A6E D;  1TMO A;  1E60 A;  4JJO A;  1PPY A;  4ZM7 A;  3SUL A;  1R7R A;  2A6H D;  1AA6 A;  3H0G A;  1BW4 A;  2E2H A;  2PI8 A;  2WB1 A;  1Y1W A;  4C2M A;  2C45 A; 
#chains in the Genus database with same CATH homology
 2HCZ X;  4L48 A;  2PIC A;  4JCW A;  2G5D A;  3X2P A;  3SUM A;  2ENG A;  3CZB A;  4FG4 A;  4JP7 A;  4FER A;  2AE0 X;  5GM9 A;  5GLY A;  3X2H A;  3X2I A;  3ENG A;  1N10 A;  3M3G A;  3X2J A;  1L8F A;  3SUK A;  1OA7 A;  3X2N A;  3X2L A;  4JS7 A;  4JP6 A;  3X2G A;  2PJJ A;  1OA9 A;  3SUJ A;  5GLX A;  5H4U A;  3X2K A;  1BW3 A;  4AVR A;  2PI8 A;  4JJO A;  3X2M A;  3D30 A;  3X2O A;  4ZM7 A;  1WC2 A;  3SUL A;  2KQA A;  2BH0 A;  1BW4 A;  4ENG A;  4FFT A;  1HD5 A;  4FG2 A;  2PNW A;  2G6G A;  2GAE A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...