3X2MA

X-ray structure of pccel45a with cellopentaose at 0.64 angstrom resolution.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2mA00
1HD5A 3SUKA 4FG2A 1L8FA 2PNWA 4ZM7A 4JCWA 5GM9A 1WC2A 4FG4A 2PI8A 5H4UA 3X2OA 2ENGA 4FERA 5GLXA 3D30A 2AE0X 4FFTA 2PJJA 4JP7A 4JP6A 1BW4A 3X2JA 3X2MA 2PICA 4JS7A 3X2HA 1OA7A 4JJOA 1N10A 4L48A 3X2KA 3X2LA 3SULA 2HCZX 3M3GA 3SUJA 3X2GA 5GLYA 3ENGA 3X2PA 2KQAA 3CZBA 3X2NA 4ENGA 2G5DA 4AVRA 2GAEA 3X2IA 3SUMA 2BH0A 1BW3A 2G6GA 1OA9A
chains in the Genus database with same CATH superfamily
1FDOA 4KDIA 4FG2A 1L8FA 1SMYD 4JCWA 4KLNA 5GM9A 4CRZA 2CW0D 1Y1WA 4C2MA 2ENGA 1FDIA 4RV0A 1TWFA 2E2IA 2VUMA 3D30A 1BW4A 4JP7A 2NVXA 2NVYA 2E7ZA 1OA7A 3X2LA 2V3VA 1SIWA 2R7ZA 1PQFA 2JIQA 1G8KA 1UHEA 3IR6A 3GTQA 3GTMA 2JA5A 2KQAA 1K83A 5FTLA 3CZBA 1PQEA 4ENGA 2WB1A 1BW3A 1E5VA 2DMRA 1PT0A 3GTOA 2E2HA 1YNJD 1WCMA 1YLEA 3PLXB 1WLFA 1OA9A 3QQ7A 1HD5A 2KI8A 2O5JD 3GTLA 2WAQA 2JIMA 5H4UA 1SFOA 2NYAA 1E18A 3TIWA 4D7ZB 1ZC1A 4NOHA 5GLXA 1H5NA 3QQ8A 2PJJA 3HU3A 3X2MA 3X2JA 2PICA 4KO8A 2R93A 1N10A 2VPZA 3H0GA 3X2KA 3SULA 1E61A 4KODA 1TWHA 1TMOA 3ENGA 5GLFA 5EPPA 1PYQA 2NAPA 2YUJA 1VC3B 1R27A 3FKIA 3X2NA 3O5AA 1PT1A 1TWCA 1UHDA 5T5ID 3HU1A 1QCSA 1Y1VA 2B63A 2BH0A 3QWZA 3IR5A 1PQHA 3GTPA 3SUKA 2A6HD 2JIRA 2JIPA 1E32A 4FG4A 5DYGA 3X2OA 2V45A 4GA5A 3DMRA 2AE0X 4FFTA 4CS0A 1H0HA 1CZ5A 1PYUB 2JIOA 4JS7A 3X2HA 5T5MD 4JJOA 2BE5D 1ZYRD 1I50A 1R7RA 1KQGA 5C1BA 2HCZX 3X2GA 1IW7D 3X2PA 5B6CA 2VPWA 4AOKB 1CR5A 1KQFA 1YNND 1Q16A 2A68D 2A69D 1EU1A 3QC8A 4AONB 4AVRA 3X2IA 1S3SA 1CZ4A 5C18A 3OUGA 4CRYG 5FTJA 5FTKA 2PMZA 1I3QA 3GTKA 3IR7A 2G6GA 3SUJA 5DYIA 2IV2X 2JA6A 5FTNA 1QDNA 3HU2A 4AYBA 2PNWA 2EEOB 4ZM7A 1WC2A 2PI8A 3CQZA 3CF2A 4FERA 1DMRA 4QIWA 1TWAA 2A6ED 4JP6A 4DMRA 2VPYA 1E60A 1G8JA 4AZDA 1TWGA 2C45A 1Y5IA 2Y0SA 1AA6A 3GTJA 4L48A 2YU9A 1Y4ZA 3ML1A 3M3GA 3GTGA 5FTMA 5GLYA 1DMSA 4KDLA 1R9TA 4AAYA 4GA6A 1PPYA 2VPXA 1OGYA 1AW8B 2G5DA 2GAEA 3TM7B 2R92A 3SUMA 3HKZA 2PJHB 2JA7A
chains in the Genus database with same CATH topology
1HD5A 3SUKA 4FG2A 1L8FA 2PNWA 4ZM7A 4JCWA 5GM9A 1WC2A 4FG4A 2PI8A 5H4UA 3X2OA 2ENGA 4FERA 5GLXA 3D30A 2AE0X 4FFTA 2PJJA 4JP7A 4JP6A 1BW4A 3X2JA 3X2MA 2PICA 4JS7A 3X2HA 1OA7A 4JJOA 1N10A 4L48A 3X2KA 3X2LA 3SULA 2HCZX 3M3GA 3SUJA 3X2GA 5GLYA 3ENGA 3X2PA 2KQAA 3CZBA 3X2NA 4ENGA 2G5DA 4AVRA 2GAEA 3X2IA 3SUMA 2BH0A 1BW3A 2G6GA 1OA9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HD5 A;  3SUK A;  4FG2 A;  1L8F A;  2PNW A;  4ZM7 A;  4JCW A;  5GM9 A;  1WC2 A;  4FG4 A;  2PI8 A;  5H4U A;  3X2O A;  2ENG A;  4FER A;  5GLX A;  3D30 A;  2AE0 X;  4FFT A;  2PJJ A;  4JP7 A;  4JP6 A;  1BW4 A;  3X2J A;  3X2M A;  2PIC A;  4JS7 A;  3X2H A;  1OA7 A;  4JJO A;  1N10 A;  4L48 A;  3X2K A;  3X2L A;  3SUL A;  2HCZ X;  3M3G A;  3SUJ A;  3X2G A;  5GLY A;  3ENG A;  3X2P A;  2KQA A;  3CZB A;  3X2N A;  4ENG A;  2G5D A;  4AVR A;  2GAE A;  3X2I A;  3SUM A;  2BH0 A;  1BW3 A;  2G6G A;  1OA9 A; 
#chains in the Genus database with same CATH topology
 1FDO A;  4KDI A;  4FG2 A;  1L8F A;  1SMY D;  4JCW A;  4KLN A;  5GM9 A;  4CRZ A;  2CW0 D;  1Y1W A;  4C2M A;  2ENG A;  1FDI A;  4RV0 A;  1TWF A;  2E2I A;  2VUM A;  3D30 A;  1BW4 A;  4JP7 A;  2NVX A;  2NVY A;  2E7Z A;  1OA7 A;  3X2L A;  2V3V A;  1SIW A;  2R7Z A;  1PQF A;  2JIQ A;  1G8K A;  1UHE A;  3IR6 A;  3GTQ A;  3GTM A;  2JA5 A;  2KQA A;  1K83 A;  5FTL A;  3CZB A;  1PQE A;  4ENG A;  2WB1 A;  1BW3 A;  1E5V A;  2DMR A;  1PT0 A;  3GTO A;  2E2H A;  1YNJ D;  1WCM A;  1YLE A;  3PLX B;  1WLF A;  1OA9 A;  3QQ7 A;  1HD5 A;  2KI8 A;  2O5J D;  3GTL A;  2WAQ A;  2JIM A;  5H4U A;  1SFO A;  2NYA A;  1E18 A;  3TIW A;  4D7Z B;  1ZC1 A;  4NOH A;  5GLX A;  1H5N A;  3QQ8 A;  2PJJ A;  3HU3 A;  3X2M A;  3X2J A;  2PIC A;  4KO8 A;  2R93 A;  1N10 A;  2VPZ A;  3H0G A;  3X2K A;  3SUL A;  1E61 A;  4KOD A;  1TWH A;  1TMO A;  3ENG A;  5GLF A;  5EPP A;  1PYQ A;  2NAP A;  2YUJ A;  1VC3 B;  1R27 A;  3FKI A;  3X2N A;  3O5A A;  1PT1 A;  1TWC A;  1UHD A;  5T5I D;  3HU1 A;  1QCS A;  1Y1V A;  2B63 A;  2BH0 A;  3QWZ A;  3IR5 A;  1PQH A;  3GTP A;  3SUK A;  2A6H D;  2JIR A;  2JIP A;  1E32 A;  4FG4 A;  5DYG A;  3X2O A;  2V45 A;  4GA5 A;  3DMR A;  2AE0 X;  4FFT A;  4CS0 A;  1H0H A;  1CZ5 A;  1PYU B;  2JIO A;  4JS7 A;  3X2H A;  5T5M D;  4JJO A;  2BE5 D;  1ZYR D;  1I50 A;  1R7R A;  1KQG A;  5C1B A;  2HCZ X;  3X2G A;  1IW7 D;  3X2P A;  5B6C A;  2VPW A;  4AOK B;  1CR5 A;  1KQF A;  1YNN D;  1Q16 A;  2A68 D;  2A69 D;  1EU1 A;  3QC8 A;  4AON B;  4AVR A;  3X2I A;  1S3S A;  1CZ4 A;  5C18 A;  3OUG A;  4CRY G;  5FTJ A;  5FTK A;  2PMZ A;  1I3Q A;  3GTK A;  3IR7 A;  2G6G A;  3SUJ A;  5DYI A;  2IV2 X;  2JA6 A;  5FTN A;  1QDN A;  3HU2 A;  4AYB A;  2PNW A;  2EEO B;  4ZM7 A;  1WC2 A;  2PI8 A;  3CQZ A;  3CF2 A;  4FER A;  1DMR A;  4QIW A;  1TWA A;  2A6E D;  4JP6 A;  4DMR A;  2VPY A;  1E60 A;  1G8J A;  4AZD A;  1TWG A;  2C45 A;  1Y5I A;  2Y0S A;  1AA6 A;  3GTJ A;  4L48 A;  2YU9 A;  1Y4Z A;  3ML1 A;  3M3G A;  3GTG A;  5FTM A;  5GLY A;  1DMS A;  4KDL A;  1R9T A;  4AAY A;  4GA6 A;  1PPY A;  2VPX A;  1OGY A;  1AW8 B;  2G5D A;  2GAE A;  3TM7 B;  2R92 A;  3SUM A;  3HKZ A;  2PJH B;  2JA7 A; 
#chains in the Genus database with same CATH homology
 1HD5 A;  3SUK A;  4FG2 A;  1L8F A;  2PNW A;  4ZM7 A;  4JCW A;  5GM9 A;  1WC2 A;  4FG4 A;  2PI8 A;  5H4U A;  3X2O A;  2ENG A;  4FER A;  5GLX A;  3D30 A;  2AE0 X;  4FFT A;  2PJJ A;  4JP7 A;  4JP6 A;  1BW4 A;  3X2J A;  3X2M A;  2PIC A;  4JS7 A;  3X2H A;  1OA7 A;  4JJO A;  1N10 A;  4L48 A;  3X2K A;  3X2L A;  3SUL A;  2HCZ X;  3M3G A;  3SUJ A;  3X2G A;  5GLY A;  3ENG A;  3X2P A;  2KQA A;  3CZB A;  3X2N A;  4ENG A;  2G5D A;  4AVR A;  2GAE A;  3X2I A;  3SUM A;  2BH0 A;  1BW3 A;  2G6G A;  1OA9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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