5T5ID

Tungsten-containing formylmethanofuran dehydrogenase from methanothermobacter wolfeii, orthorhombic form at 1.9 a
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
130
structure length
130
Chain Sequence
MRVILNTGRTIWQGQAIESGKDLKMYVDAAAIIQMNPEMMKQLGIAEGDNVKVISEYGDVVVKAVEAKEPLPEGMVYIPMGPWANRVIRPYTDSTATPSFKNIPVEIIPTDEEVLDMPTLMKVYGKVGQI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
publication title The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
pubmed doi rcsb
molecule keywords Tungsten formylmethanofuran dehydrogenase subunit fwdA
total genus 32
structure length 130
sequence length 130
chains with identical sequence L
ec nomenclature
pdb deposition date 2016-08-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF01568 Molydop_binding Molydopterin dinucleotide binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.20 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 5t5iD00
5DYGA 2YU9A 1R9TA 1QDNA 2DMRA 2PJHB 3IR5A 3QWZA 1PPYA 1UHEA 3IR6A 1G8JA 1WLFA 5FTKA 4KLNA 2VPWA 1E60A 4RV0A 1WCMA 3CQZA 5FTLA 3GTJA 2JIOA 4C2MA 4CS0A 3GTPA 1EU1A 2R92A 2IV2X 4CRZA 1PT0A 2WAQA 3HU1A 5FTNA 1AW8B 2JA5A 4KDLA 2JIPA 4KDIA 3GTOA 4AAYA 3FKIA 1FDOA 4KO8A 4CRYG 3HU2A 3QQ7A 2NAPA 1PYQA 3GTMA 2VPXA 3TIWA 5T5ID 2R93A 2NVYA 1DMSA 2C45A 5B6CA 4QIWA 3GTLA 1OGYA 1I3QA 5DYIA 1PQHA 1TWAA 1KQFA 3HKZA 2NYAA 5GLFA 1VC3B 1CZ5A 1TWCA 1E32A 1Y4ZA 2WB1A 3TM7B 2VPZA 2JIMA 1QCSA 2E7ZA 2V3VA 1SFOA 1K83A 2VPYA 1G8KA 1H0HA 3HU3A 5FTMA 4AOKB 2V45A 1Y5IA 2PMZA 1E18A 3PLXB 2E2IA 1Y1WA 3IR7A 1TWFA 3QC8A 1PQEA 1YLEA 3GTGA 2NVXA 4GA5A 4KODA 2JIRA 1I50A 3O5AA 1E61A 1TMOA 2B63A 1TWHA 5FTJA 2JIQA 4AYBA 5EPPA 3DMRA 3H0GA 5C18A 3QQ8A 2JA7A 5T5MD 1R7RA 3CF2A 1TWGA 3OUGA 4DMRA 1KQGA 1Y1VA 1DMRA 3GTQA 1PYUB 4GA6A 4D7ZB 3GTKA 2R7ZA 1FDIA 1Q16A 1CR5A 2Y0SA 1IW7D 1AA6A 1E5VA 1PT1A 3ML1A 4AONB 2JA6A 2E2HA 1PQFA 1H5NA 2KI8A 5C1BA 2VUMA 2EEOB 1SIWA 1S3SA 1R27A 4AZDA 1CZ4A 1UHDA
chains in the Genus database with same CATH superfamily
5DYGA 2YU9A 1R9TA 3SUKA 1QDNA 2DMRA 2PJHB 3IR5A 3QWZA 1PPYA 1UHEA 3X2PA 3IR6A 3X2HA 1G8JA 1WLFA 5FTKA 2PICA 2VPWA 4KLNA 1E60A 4RV0A 1WCMA 3CQZA 5FTLA 2A69D 2JIOA 4C2MA 3GTJA 3X2OA 4CS0A 2A6ED 4JP7A 3GTPA 1EU1A 2R92A 2IV2X 4CRZA 1ZYRD 1PT0A 2A6HD 3X2MA 2WAQA 1N10A 3HU1A 5FTNA 1AW8B 5GM9A 3X2IA 4FERA 2JA5A 4KDLA 2JIPA 4KDIA 3GTOA 4AAYA 3FKIA 3X2LA 1FDOA 4JP6A 4KO8A 4CRYG 3HU2A 3QQ7A 1SMYD 4ENGA 2ENGA 2NAPA 1PYQA 3GTMA 2VPXA 2HCZX 5T5ID 3TIWA 2R93A 2NVYA 1DMSA 2C45A 5B6CA 4QIWA 3GTLA 1OGYA 1I3QA 3ENGA 2O5JD 4JJOA 5DYIA 1PQHA 1TWAA 1KQFA 3HKZA 2NYAA 5GLFA 2YUJA 1VC3B 4FG4A 3X2JA 1TWCA 1E32A 1CZ5A 1Y4ZA 2G5DA 2WB1A 3TM7B 2VPZA 3D30A 1YNND 2JIMA 4FFTA 4FG2A 1QCSA 5GLXA 2E7ZA 2V3VA 2AE0X 1SFOA 4JS7A 1K83A 2BH0A 2VPYA 1G8KA 1H0HA 3HU3A 5FTMA 4AOKB 2V45A 1Y5IA 4JCWA 1BW4A 2PMZA 1E18A 3SULA 3PLXB 1HD5A 2E2IA 1Y1WA 1L8FA 3IR7A 1TWFA 1YNJD 3QC8A 5H4UA 1PQEA 1YLEA 2GAEA 3GTGA 2KQAA 2NVXA 4GA5A 4KODA 3X2GA 2JIRA 3M3GA 1I50A 1WC2A 3O5AA 1E61A 1TMOA 2B63A 2A68D 1TWHA 5FTJA 2JIQA 1ZC1A 4AYBA 5EPPA 2G6GA 3DMRA 3H0GA 3CZBA 3X2NA 4AVRA 3QQ8A 5GLYA 5C18A 2JA7A 5T5MD 1R7RA 3CF2A 1TWGA 3OUGA 4DMRA 1KQGA 1BW3A 1OA7A 1Y1VA 2PNWA 1DMRA 3GTQA 1OA9A 1PYUB 4GA6A 4D7ZB 3GTKA 2R7ZA 1FDIA 1Q16A 2PJJA 1CR5A 2Y0SA 4NOHA 4L48A 1IW7D 2CW0D 1AA6A 1E5VA 1PT1A 3ML1A 3X2KA 4AONB 2JA6A 2E2HA 1PQFA 2PI8A 1H5NA 2BE5D 2KI8A 4ZM7A 5C1BA 3SUJA 2VUMA 2EEOB 1SIWA 1S3SA 3SUMA 1R27A 4AZDA 1CZ4A 1UHDA
chains in the Genus database with same CATH topology
5DYGA 2YU9A 1R9TA 1QDNA 2DMRA 2PJHB 3IR5A 3QWZA 1PPYA 1UHEA 3IR6A 1G8JA 1WLFA 5FTKA 2PICA 2VPWA 4KLNA 1E60A 4RV0A 1WCMA 3CQZA 5FTLA 2A69D 2JIOA 4C2MA 3GTJA 4CS0A 2A6ED 3GTPA 1EU1A 2R92A 2IV2X 4CRZA 1ZYRD 1PT0A 2A6HD 2WAQA 3HU1A 5FTNA 1AW8B 2JA5A 4KDLA 2JIPA 4KDIA 3GTOA 4AAYA 3FKIA 1FDOA 4KO8A 4CRYG 3HU2A 3QQ7A 1SMYD 2NAPA 1PYQA 3GTMA 2VPXA 3TIWA 5T5ID 2R93A 2NVYA 1DMSA 2C45A 5B6CA 4QIWA 3GTLA 1OGYA 1I3QA 2O5JD 5DYIA 1PQHA 1TWAA 1KQFA 3HKZA 2NYAA 5GLFA 2YUJA 1VC3B 1CZ5A 1TWCA 1E32A 1Y4ZA 2G5DA 2WB1A 3TM7B 2VPZA 1YNND 2JIMA 1QCSA 2E7ZA 2V3VA 2AE0X 1SFOA 1K83A 2VPYA 1G8KA 1H0HA 3HU3A 5FTMA 4AOKB 2V45A 1Y5IA 2PMZA 1E18A 3PLXB 2E2IA 1Y1WA 3IR7A 1TWFA 1YNJD 3QC8A 1PQEA 1YLEA 2GAEA 3GTGA 2NVXA 4GA5A 4KODA 2JIRA 1I50A 3O5AA 1E61A 1TMOA 2B63A 2A68D 1TWHA 5FTJA 2JIQA 1ZC1A 4AYBA 5EPPA 2G6GA 3DMRA 3H0GA 3CZBA 5C18A 3QQ8A 2JA7A 5T5MD 1R7RA 3CF2A 1TWGA 3OUGA 4DMRA 1KQGA 1Y1VA 2PNWA 1DMRA 3GTQA 1PYUB 4GA6A 4D7ZB 3GTKA 2R7ZA 1FDIA 1Q16A 2PJJA 1CR5A 2Y0SA 4NOHA 1IW7D 2CW0D 1AA6A 1E5VA 1PT1A 3ML1A 4AONB 2JA6A 2E2HA 1PQFA 2PI8A 1H5NA 2BE5D 2KI8A 5C1BA 2VUMA 2EEOB 1SIWA 1S3SA 1R27A 4AZDA 1CZ4A 1UHDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5DYG A;  2YU9 A;  1R9T A;  1QDN A;  2DMR A;  2PJH B;  3IR5 A;  3QWZ A;  1PPY A;  1UHE A;  3IR6 A;  1G8J A;  1WLF A;  5FTK A;  4KLN A;  2VPW A;  1E60 A;  4RV0 A;  1WCM A;  3CQZ A;  5FTL A;  3GTJ A;  2JIO A;  4C2M A;  4CS0 A;  3GTP A;  1EU1 A;  2R92 A;  2IV2 X;  4CRZ A;  1PT0 A;  2WAQ A;  3HU1 A;  5FTN A;  1AW8 B;  2JA5 A;  4KDL A;  2JIP A;  4KDI A;  3GTO A;  4AAY A;  3FKI A;  1FDO A;  4KO8 A;  4CRY G;  3HU2 A;  3QQ7 A;  2NAP A;  1PYQ A;  3GTM A;  2VPX A;  3TIW A;  5T5I D;  2R93 A;  2NVY A;  1DMS A;  2C45 A;  5B6C A;  4QIW A;  3GTL A;  1OGY A;  1I3Q A;  5DYI A;  1PQH A;  1TWA A;  1KQF A;  3HKZ A;  2NYA A;  5GLF A;  1VC3 B;  1CZ5 A;  1TWC A;  1E32 A;  1Y4Z A;  2WB1 A;  3TM7 B;  2VPZ A;  2JIM A;  1QCS A;  2E7Z A;  2V3V A;  1SFO A;  1K83 A;  2VPY A;  1G8K A;  1H0H A;  3HU3 A;  5FTM A;  4AOK B;  2V45 A;  1Y5I A;  2PMZ A;  1E18 A;  3PLX B;  2E2I A;  1Y1W A;  3IR7 A;  1TWF A;  3QC8 A;  1PQE A;  1YLE A;  3GTG A;  2NVX A;  4GA5 A;  4KOD A;  2JIR A;  1I50 A;  3O5A A;  1E61 A;  1TMO A;  2B63 A;  1TWH A;  5FTJ A;  2JIQ A;  4AYB A;  5EPP A;  3DMR A;  3H0G A;  5C18 A;  3QQ8 A;  2JA7 A;  5T5M D;  1R7R A;  3CF2 A;  1TWG A;  3OUG A;  4DMR A;  1KQG A;  1Y1V A;  1DMR A;  3GTQ A;  1PYU B;  4GA6 A;  4D7Z B;  3GTK A;  2R7Z A;  1FDI A;  1Q16 A;  1CR5 A;  2Y0S A;  1IW7 D;  1AA6 A;  1E5V A;  1PT1 A;  3ML1 A;  4AON B;  2JA6 A;  2E2H A;  1PQF A;  1H5N A;  2KI8 A;  5C1B A;  2VUM A;  2EEO B;  1SIW A;  1S3S A;  1R27 A;  4AZD A;  1CZ4 A;  1UHD A; 
#chains in the Genus database with same CATH topology
 5DYG A;  2YU9 A;  1R9T A;  3SUK A;  1QDN A;  2DMR A;  2PJH B;  3IR5 A;  3QWZ A;  1PPY A;  1UHE A;  3X2P A;  3IR6 A;  3X2H A;  1G8J A;  1WLF A;  5FTK A;  2PIC A;  2VPW A;  4KLN A;  1E60 A;  4RV0 A;  1WCM A;  3CQZ A;  5FTL A;  2A69 D;  2JIO A;  4C2M A;  3GTJ A;  3X2O A;  4CS0 A;  2A6E D;  4JP7 A;  3GTP A;  1EU1 A;  2R92 A;  2IV2 X;  4CRZ A;  1ZYR D;  1PT0 A;  2A6H D;  3X2M A;  2WAQ A;  1N10 A;  3HU1 A;  5FTN A;  1AW8 B;  5GM9 A;  3X2I A;  4FER A;  2JA5 A;  4KDL A;  2JIP A;  4KDI A;  3GTO A;  4AAY A;  3FKI A;  3X2L A;  1FDO A;  4JP6 A;  4KO8 A;  4CRY G;  3HU2 A;  3QQ7 A;  1SMY D;  4ENG A;  2ENG A;  2NAP A;  1PYQ A;  3GTM A;  2VPX A;  2HCZ X;  5T5I D;  3TIW A;  2R93 A;  2NVY A;  1DMS A;  2C45 A;  5B6C A;  4QIW A;  3GTL A;  1OGY A;  1I3Q A;  3ENG A;  2O5J D;  4JJO A;  5DYI A;  1PQH A;  1TWA A;  1KQF A;  3HKZ A;  2NYA A;  5GLF A;  2YUJ A;  1VC3 B;  4FG4 A;  3X2J A;  1TWC A;  1E32 A;  1CZ5 A;  1Y4Z A;  2G5D A;  2WB1 A;  3TM7 B;  2VPZ A;  3D30 A;  1YNN D;  2JIM A;  4FFT A;  4FG2 A;  1QCS A;  5GLX A;  2E7Z A;  2V3V A;  2AE0 X;  1SFO A;  4JS7 A;  1K83 A;  2BH0 A;  2VPY A;  1G8K A;  1H0H A;  3HU3 A;  5FTM A;  4AOK B;  2V45 A;  1Y5I A;  4JCW A;  1BW4 A;  2PMZ A;  1E18 A;  3SUL A;  3PLX B;  1HD5 A;  2E2I A;  1Y1W A;  1L8F A;  3IR7 A;  1TWF A;  1YNJ D;  3QC8 A;  5H4U A;  1PQE A;  1YLE A;  2GAE A;  3GTG A;  2KQA A;  2NVX A;  4GA5 A;  4KOD A;  3X2G A;  2JIR A;  3M3G A;  1I50 A;  1WC2 A;  3O5A A;  1E61 A;  1TMO A;  2B63 A;  2A68 D;  1TWH A;  5FTJ A;  2JIQ A;  1ZC1 A;  4AYB A;  5EPP A;  2G6G A;  3DMR A;  3H0G A;  3CZB A;  3X2N A;  4AVR A;  3QQ8 A;  5GLY A;  5C18 A;  2JA7 A;  5T5M D;  1R7R A;  3CF2 A;  1TWG A;  3OUG A;  4DMR A;  1KQG A;  1BW3 A;  1OA7 A;  1Y1V A;  2PNW A;  1DMR A;  3GTQ A;  1OA9 A;  1PYU B;  4GA6 A;  4D7Z B;  3GTK A;  2R7Z A;  1FDI A;  1Q16 A;  2PJJ A;  1CR5 A;  2Y0S A;  4NOH A;  4L48 A;  1IW7 D;  2CW0 D;  1AA6 A;  1E5V A;  1PT1 A;  3ML1 A;  3X2K A;  4AON B;  2JA6 A;  2E2H A;  1PQF A;  2PI8 A;  1H5N A;  2BE5 D;  2KI8 A;  4ZM7 A;  5C1B A;  3SUJ A;  2VUM A;  2EEO B;  1SIW A;  1S3S A;  3SUM A;  1R27 A;  4AZD A;  1CZ4 A;  1UHD A; 
#chains in the Genus database with same CATH homology
 5DYG A;  2YU9 A;  1R9T A;  1QDN A;  2DMR A;  2PJH B;  3IR5 A;  3QWZ A;  1PPY A;  1UHE A;  3IR6 A;  1G8J A;  1WLF A;  5FTK A;  2PIC A;  2VPW A;  4KLN A;  1E60 A;  4RV0 A;  1WCM A;  3CQZ A;  5FTL A;  2A69 D;  2JIO A;  4C2M A;  3GTJ A;  4CS0 A;  2A6E D;  3GTP A;  1EU1 A;  2R92 A;  2IV2 X;  4CRZ A;  1ZYR D;  1PT0 A;  2A6H D;  2WAQ A;  3HU1 A;  5FTN A;  1AW8 B;  2JA5 A;  4KDL A;  2JIP A;  4KDI A;  3GTO A;  4AAY A;  3FKI A;  1FDO A;  4KO8 A;  4CRY G;  3HU2 A;  3QQ7 A;  1SMY D;  2NAP A;  1PYQ A;  3GTM A;  2VPX A;  3TIW A;  5T5I D;  2R93 A;  2NVY A;  1DMS A;  2C45 A;  5B6C A;  4QIW A;  3GTL A;  1OGY A;  1I3Q A;  2O5J D;  5DYI A;  1PQH A;  1TWA A;  1KQF A;  3HKZ A;  2NYA A;  5GLF A;  2YUJ A;  1VC3 B;  1CZ5 A;  1TWC A;  1E32 A;  1Y4Z A;  2G5D A;  2WB1 A;  3TM7 B;  2VPZ A;  1YNN D;  2JIM A;  1QCS A;  2E7Z A;  2V3V A;  2AE0 X;  1SFO A;  1K83 A;  2VPY A;  1G8K A;  1H0H A;  3HU3 A;  5FTM A;  4AOK B;  2V45 A;  1Y5I A;  2PMZ A;  1E18 A;  3PLX B;  2E2I A;  1Y1W A;  3IR7 A;  1TWF A;  1YNJ D;  3QC8 A;  1PQE A;  1YLE A;  2GAE A;  3GTG A;  2NVX A;  4GA5 A;  4KOD A;  2JIR A;  1I50 A;  3O5A A;  1E61 A;  1TMO A;  2B63 A;  2A68 D;  1TWH A;  5FTJ A;  2JIQ A;  1ZC1 A;  4AYB A;  5EPP A;  2G6G A;  3DMR A;  3H0G A;  3CZB A;  5C18 A;  3QQ8 A;  2JA7 A;  5T5M D;  1R7R A;  3CF2 A;  1TWG A;  3OUG A;  4DMR A;  1KQG A;  1Y1V A;  2PNW A;  1DMR A;  3GTQ A;  1PYU B;  4GA6 A;  4D7Z B;  3GTK A;  2R7Z A;  1FDI A;  1Q16 A;  2PJJ A;  1CR5 A;  2Y0S A;  4NOH A;  1IW7 D;  2CW0 D;  1AA6 A;  1E5V A;  1PT1 A;  3ML1 A;  4AON B;  2JA6 A;  2E2H A;  1PQF A;  2PI8 A;  1H5N A;  2BE5 D;  2KI8 A;  5C1B A;  2VUM A;  2EEO B;  1SIW A;  1S3S A;  1R27 A;  4AZD A;  1CZ4 A;  1UHD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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