5T5ID

Tungsten-containing formylmethanofuran dehydrogenase from methanothermobacter wolfeii, orthorhombic form at 1.9 a
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
130
structure length
130
Chain Sequence
MRVILNTGRTIWQGQAIESGKDLKMYVDAAAIIQMNPEMMKQLGIAEGDNVKVISEYGDVVVKAVEAKEPLPEGMVYIPMGPWANRVIRPYTDSTATPSFKNIPVEIIPTDEEVLDMPTLMKVYGKVGQI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
pubmed doi rcsb
molecule keywords Tungsten formylmethanofuran dehydrogenase subunit fwdA
molecule tags Oxidoreductase
total genus 32
structure length 130
sequence length 130
chains with identical sequence L
ec nomenclature
pdb deposition date 2016-08-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF01568 Molydop_binding Molydopterin dinucleotide binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.20 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 5t5iD00
1CZ4A 2JIPA 1DMRA 1VC3B 3HU1A 2JA6A 1QCSA 3QQ7A 4GA5A 4QIWA 5EPPA 2NYAA 3GTJA 3ML1A 3QQ8A 2E2HA 4KLNA 1Y1VA 1Y5IA 3HU2A 2R93A 1G8JA 1S3SA 1QDNA 3CQZA 3PLXB 4KO8A 1IW7D 3CF2A 1WLFA 5T5MD 1AA6A 1WCMA 2NVYA 1CR5A 4CRZA 1TWAA 2IV2X 1SFOA 1R27A 2VPXA 1Y4ZA 1H0HA 1TMOA 2VUMA 1TWFA 4KDIA 1KQGA 4AAYA 2JA5A 1PT0A 5FTLA 1FDIA 1K83A 2YU9A 2B63A 3HU3A 1PQHA 4C2MA 2E2IA 4AYBA 2V3VA 1OGYA 5DYIA 3HKZA 2EEOB 2VPWA 5FTKA 1YLEA 4GA6A 1UHDA 2PJHB 5FTMA 3TM7B 4AOKB 1H5NA 5C1BA 2JIQA 3DMRA 1KQFA 2NVXA 4RV0A 4AONB 1I3QA 2KI8A 3QC8A 3O5AA 1PQFA 1PYUB 2JIRA 5GLFA 1TWCA 3FKIA 3QWZA 1DMSA 2NAPA 2VPZA 4CS0A 2PMZA 3H0GA 1PYQA 2R92A 3GTQA 1TWHA 4CRYG 2JIMA 3GTGA 4KDLA 1G8KA 5T5ID 1EU1A 1E5VA 3IR5A 4D7ZB 4KODA 1FDOA 2VPYA 5C18A 1R9TA 3IR7A 2E7ZA 3OUGA 3GTOA 1SIWA 5FTNA 1Y1WA 1R7RA 2JA7A 1I50A 1Q16A 1E60A 3GTPA 1E18A 1AW8B 1E61A 2JIOA 5FTJA 4AZDA 1PQEA 2DMRA 2WAQA 1E32A 1PPYA 3GTKA 1PT1A 3GTLA 2Y0SA 3GTMA 2C45A 5DYGA 1TWGA 2WB1A 5B6CA 3TIWA 4DMRA 1UHEA 1CZ5A 2R7ZA 3IR6A 2V45A
chains in the Genus database with same CATH superfamily
1CZ4A 2JIPA 1DMRA 1VC3B 3HU1A 2JA6A 1QCSA 3QQ7A 4GA5A 4QIWA 3SUJA 4AVRA 5EPPA 1YNND 2NYAA 5GLXA 3GTJA 3ML1A 3QQ8A 2E2HA 4JP7A 4KLNA 1Y1VA 1Y5IA 2GAEA 3HU2A 2R93A 1G8JA 1S3SA 3X2HA 1QDNA 3CQZA 3PLXB 4KO8A 1IW7D 3CF2A 2BH0A 1WLFA 3X2KA 5T5MD 1AA6A 1WCMA 2NVYA 1CR5A 4CRZA 4FFTA 1TWAA 2IV2X 2A6HD 1SFOA 1R27A 2VPXA 1Y4ZA 1H0HA 2A68D 1TMOA 2VUMA 2CW0D 1TWFA 4KDIA 1KQGA 1ZC1A 4AAYA 2ENGA 2A6ED 4ZM7A 2JA5A 1PT0A 2KQAA 1FDIA 5FTLA 1K83A 3X2MA 2YU9A 1L8FA 2B63A 3X2LA 1ZYRD 3HU3A 1PQHA 4C2MA 1YNJD 4AYBA 2V3VA 2E2IA 1OGYA 2AE0X 3HKZA 5DYIA 2EEOB 2VPWA 5FTKA 4L48A 1YLEA 1OA7A 3D30A 4FG2A 4GA6A 1UHDA 2PJHB 4JCWA 5FTMA 3TM7B 2O5JD 3X2IA 4AOKB 4JP6A 1H5NA 5C1BA 2JIQA 5GM9A 3DMRA 4NOHA 2BE5D 1KQFA 2NVXA 4RV0A 2PICA 4AONB 3X2JA 1I3QA 2KI8A 4ENGA 3QC8A 3O5AA 1PQFA 1PYUB 2PNWA 3ENGA 2JIRA 2PJJA 5GLFA 3X2OA 1TWCA 3FKIA 2G6GA 3QWZA 1DMSA 2NAPA 2VPZA 4CS0A 1BW3A 2HCZX 2PMZA 3H0GA 1PYQA 2R92A 3GTQA 1TWHA 4CRYG 2JIMA 3GTGA 1WC2A 4KDLA 3SULA 1G8KA 1N10A 3CZBA 1EU1A 1E5VA 3IR5A 4FG4A 5T5ID 4KODA 1FDOA 2PI8A 2VPYA 3X2NA 4D7ZB 3IR7A 5C18A 4FERA 1R9TA 2E7ZA 3OUGA 3GTOA 1SIWA 5FTNA 1SMYD 1R7RA 1Y1WA 2JA7A 2A69D 1I50A 1Q16A 1E60A 3GTPA 1E18A 2YUJA 1AW8B 1E61A 2JIOA 5FTJA 4AZDA 1PQEA 2DMRA 2WAQA 1E32A 1OA9A 1PPYA 3GTKA 1PT1A 5H4UA 3GTLA 2Y0SA 3GTMA 1HD5A 2C45A 3SUMA 5DYGA 1TWGA 4JS7A 2G5DA 2WB1A 5B6CA 3X2PA 4JJOA 5GLYA 3SUKA 3M3GA 3TIWA 3X2GA 4DMRA 1UHEA 1CZ5A 2R7ZA 1BW4A 3IR6A 2V45A
chains in the Genus database with same CATH topology
1CZ4A 2JIPA 1DMRA 1VC3B 3HU1A 2JA6A 1QCSA 3QQ7A 4GA5A 4QIWA 5EPPA 1YNND 2NYAA 3GTJA 3ML1A 3QQ8A 2E2HA 4KLNA 1Y1VA 1Y5IA 2GAEA 3HU2A 2R93A 1G8JA 1S3SA 1QDNA 3CQZA 3PLXB 4KO8A 1IW7D 3CF2A 1WLFA 5T5MD 1AA6A 1WCMA 2NVYA 1CR5A 4CRZA 1TWAA 2IV2X 2A6HD 1SFOA 1R27A 2VPXA 1Y4ZA 1H0HA 2A68D 1TMOA 2VUMA 2CW0D 1TWFA 4KDIA 1KQGA 1ZC1A 4AAYA 2A6ED 2JA5A 1PT0A 5FTLA 1FDIA 1K83A 2YU9A 2B63A 1ZYRD 3HU3A 1PQHA 4C2MA 1YNJD 4AYBA 2V3VA 2E2IA 1OGYA 2AE0X 3HKZA 5DYIA 2EEOB 2VPWA 5FTKA 1YLEA 4GA6A 1UHDA 2PJHB 5FTMA 3TM7B 2O5JD 4AOKB 1H5NA 5C1BA 2JIQA 3DMRA 4NOHA 2BE5D 1KQFA 2NVXA 4RV0A 2PICA 4AONB 1I3QA 2KI8A 3QC8A 3O5AA 1PQFA 1PYUB 2PNWA 2JIRA 2PJJA 5GLFA 1TWCA 3FKIA 2G6GA 3QWZA 1DMSA 2NAPA 2VPZA 4CS0A 2PMZA 3H0GA 1PYQA 2R92A 3GTQA 1TWHA 4CRYG 2JIMA 3GTGA 4KDLA 1G8KA 3CZBA 5T5ID 1EU1A 1E5VA 3IR5A 4D7ZB 4KODA 1FDOA 2PI8A 2VPYA 5C18A 1R9TA 3IR7A 2E7ZA 3OUGA 3GTOA 1SIWA 5FTNA 1SMYD 1R7RA 1Y1WA 2JA7A 2A69D 1I50A 1Q16A 1E60A 3GTPA 1E18A 2YUJA 1AW8B 1E61A 2JIOA 5FTJA 4AZDA 1PQEA 2DMRA 2WAQA 1E32A 1PPYA 3GTKA 1PT1A 3GTLA 2Y0SA 3GTMA 2C45A 5DYGA 1TWGA 2G5DA 2WB1A 5B6CA 3TIWA 4DMRA 1UHEA 1CZ5A 2R7ZA 3IR6A 2V45A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CZ4 A;  2JIP A;  1DMR A;  1VC3 B;  3HU1 A;  2JA6 A;  1QCS A;  3QQ7 A;  4GA5 A;  4QIW A;  5EPP A;  2NYA A;  3GTJ A;  3ML1 A;  3QQ8 A;  2E2H A;  4KLN A;  1Y1V A;  1Y5I A;  3HU2 A;  2R93 A;  1G8J A;  1S3S A;  1QDN A;  3CQZ A;  3PLX B;  4KO8 A;  1IW7 D;  3CF2 A;  1WLF A;  5T5M D;  1AA6 A;  1WCM A;  2NVY A;  1CR5 A;  4CRZ A;  1TWA A;  2IV2 X;  1SFO A;  1R27 A;  2VPX A;  1Y4Z A;  1H0H A;  1TMO A;  2VUM A;  1TWF A;  4KDI A;  1KQG A;  4AAY A;  2JA5 A;  1PT0 A;  5FTL A;  1FDI A;  1K83 A;  2YU9 A;  2B63 A;  3HU3 A;  1PQH A;  4C2M A;  2E2I A;  4AYB A;  2V3V A;  1OGY A;  5DYI A;  3HKZ A;  2EEO B;  2VPW A;  5FTK A;  1YLE A;  4GA6 A;  1UHD A;  2PJH B;  5FTM A;  3TM7 B;  4AOK B;  1H5N A;  5C1B A;  2JIQ A;  3DMR A;  1KQF A;  2NVX A;  4RV0 A;  4AON B;  1I3Q A;  2KI8 A;  3QC8 A;  3O5A A;  1PQF A;  1PYU B;  2JIR A;  5GLF A;  1TWC A;  3FKI A;  3QWZ A;  1DMS A;  2NAP A;  2VPZ A;  4CS0 A;  2PMZ A;  3H0G A;  1PYQ A;  2R92 A;  3GTQ A;  1TWH A;  4CRY G;  2JIM A;  3GTG A;  4KDL A;  1G8K A;  5T5I D;  1EU1 A;  1E5V A;  3IR5 A;  4D7Z B;  4KOD A;  1FDO A;  2VPY A;  5C18 A;  1R9T A;  3IR7 A;  2E7Z A;  3OUG A;  3GTO A;  1SIW A;  5FTN A;  1Y1W A;  1R7R A;  2JA7 A;  1I50 A;  1Q16 A;  1E60 A;  3GTP A;  1E18 A;  1AW8 B;  1E61 A;  2JIO A;  5FTJ A;  4AZD A;  1PQE A;  2DMR A;  2WAQ A;  1E32 A;  1PPY A;  3GTK A;  1PT1 A;  3GTL A;  2Y0S A;  3GTM A;  2C45 A;  5DYG A;  1TWG A;  2WB1 A;  5B6C A;  3TIW A;  4DMR A;  1UHE A;  1CZ5 A;  2R7Z A;  3IR6 A;  2V45 A; 
#chains in the Genus database with same CATH topology
 1CZ4 A;  2JIP A;  1DMR A;  1VC3 B;  3HU1 A;  2JA6 A;  1QCS A;  3QQ7 A;  4GA5 A;  4QIW A;  3SUJ A;  4AVR A;  5EPP A;  1YNN D;  2NYA A;  5GLX A;  3GTJ A;  3ML1 A;  3QQ8 A;  2E2H A;  4JP7 A;  4KLN A;  1Y1V A;  1Y5I A;  2GAE A;  3HU2 A;  2R93 A;  1G8J A;  1S3S A;  3X2H A;  1QDN A;  3CQZ A;  3PLX B;  4KO8 A;  1IW7 D;  3CF2 A;  2BH0 A;  1WLF A;  3X2K A;  5T5M D;  1AA6 A;  1WCM A;  2NVY A;  1CR5 A;  4CRZ A;  4FFT A;  1TWA A;  2IV2 X;  2A6H D;  1SFO A;  1R27 A;  2VPX A;  1Y4Z A;  1H0H A;  2A68 D;  1TMO A;  2VUM A;  2CW0 D;  1TWF A;  4KDI A;  1KQG A;  1ZC1 A;  4AAY A;  2ENG A;  2A6E D;  4ZM7 A;  2JA5 A;  1PT0 A;  2KQA A;  1FDI A;  5FTL A;  1K83 A;  3X2M A;  2YU9 A;  1L8F A;  2B63 A;  3X2L A;  1ZYR D;  3HU3 A;  1PQH A;  4C2M A;  1YNJ D;  4AYB A;  2V3V A;  2E2I A;  1OGY A;  2AE0 X;  3HKZ A;  5DYI A;  2EEO B;  2VPW A;  5FTK A;  4L48 A;  1YLE A;  1OA7 A;  3D30 A;  4FG2 A;  4GA6 A;  1UHD A;  2PJH B;  4JCW A;  5FTM A;  3TM7 B;  2O5J D;  3X2I A;  4AOK B;  4JP6 A;  1H5N A;  5C1B A;  2JIQ A;  5GM9 A;  3DMR A;  4NOH A;  2BE5 D;  1KQF A;  2NVX A;  4RV0 A;  2PIC A;  4AON B;  3X2J A;  1I3Q A;  2KI8 A;  4ENG A;  3QC8 A;  3O5A A;  1PQF A;  1PYU B;  2PNW A;  3ENG A;  2JIR A;  2PJJ A;  5GLF A;  3X2O A;  1TWC A;  3FKI A;  2G6G A;  3QWZ A;  1DMS A;  2NAP A;  2VPZ A;  4CS0 A;  1BW3 A;  2HCZ X;  2PMZ A;  3H0G A;  1PYQ A;  2R92 A;  3GTQ A;  1TWH A;  4CRY G;  2JIM A;  3GTG A;  1WC2 A;  4KDL A;  3SUL A;  1G8K A;  1N10 A;  3CZB A;  1EU1 A;  1E5V A;  3IR5 A;  4FG4 A;  5T5I D;  4KOD A;  1FDO A;  2PI8 A;  2VPY A;  3X2N A;  4D7Z B;  3IR7 A;  5C18 A;  4FER A;  1R9T A;  2E7Z A;  3OUG A;  3GTO A;  1SIW A;  5FTN A;  1SMY D;  1R7R A;  1Y1W A;  2JA7 A;  2A69 D;  1I50 A;  1Q16 A;  1E60 A;  3GTP A;  1E18 A;  2YUJ A;  1AW8 B;  1E61 A;  2JIO A;  5FTJ A;  4AZD A;  1PQE A;  2DMR A;  2WAQ A;  1E32 A;  1OA9 A;  1PPY A;  3GTK A;  1PT1 A;  5H4U A;  3GTL A;  2Y0S A;  3GTM A;  1HD5 A;  2C45 A;  3SUM A;  5DYG A;  1TWG A;  4JS7 A;  2G5D A;  2WB1 A;  5B6C A;  3X2P A;  4JJO A;  5GLY A;  3SUK A;  3M3G A;  3TIW A;  3X2G A;  4DMR A;  1UHE A;  1CZ5 A;  2R7Z A;  1BW4 A;  3IR6 A;  2V45 A; 
#chains in the Genus database with same CATH homology
 1CZ4 A;  2JIP A;  1DMR A;  1VC3 B;  3HU1 A;  2JA6 A;  1QCS A;  3QQ7 A;  4GA5 A;  4QIW A;  5EPP A;  1YNN D;  2NYA A;  3GTJ A;  3ML1 A;  3QQ8 A;  2E2H A;  4KLN A;  1Y1V A;  1Y5I A;  2GAE A;  3HU2 A;  2R93 A;  1G8J A;  1S3S A;  1QDN A;  3CQZ A;  3PLX B;  4KO8 A;  1IW7 D;  3CF2 A;  1WLF A;  5T5M D;  1AA6 A;  1WCM A;  2NVY A;  1CR5 A;  4CRZ A;  1TWA A;  2IV2 X;  2A6H D;  1SFO A;  1R27 A;  2VPX A;  1Y4Z A;  1H0H A;  2A68 D;  1TMO A;  2VUM A;  2CW0 D;  1TWF A;  4KDI A;  1KQG A;  1ZC1 A;  4AAY A;  2A6E D;  2JA5 A;  1PT0 A;  5FTL A;  1FDI A;  1K83 A;  2YU9 A;  2B63 A;  1ZYR D;  3HU3 A;  1PQH A;  4C2M A;  1YNJ D;  4AYB A;  2V3V A;  2E2I A;  1OGY A;  2AE0 X;  3HKZ A;  5DYI A;  2EEO B;  2VPW A;  5FTK A;  1YLE A;  4GA6 A;  1UHD A;  2PJH B;  5FTM A;  3TM7 B;  2O5J D;  4AOK B;  1H5N A;  5C1B A;  2JIQ A;  3DMR A;  4NOH A;  2BE5 D;  1KQF A;  2NVX A;  4RV0 A;  2PIC A;  4AON B;  1I3Q A;  2KI8 A;  3QC8 A;  3O5A A;  1PQF A;  1PYU B;  2PNW A;  2JIR A;  2PJJ A;  5GLF A;  1TWC A;  3FKI A;  2G6G A;  3QWZ A;  1DMS A;  2NAP A;  2VPZ A;  4CS0 A;  2PMZ A;  3H0G A;  1PYQ A;  2R92 A;  3GTQ A;  1TWH A;  4CRY G;  2JIM A;  3GTG A;  4KDL A;  1G8K A;  3CZB A;  5T5I D;  1EU1 A;  1E5V A;  3IR5 A;  4D7Z B;  4KOD A;  1FDO A;  2PI8 A;  2VPY A;  5C18 A;  1R9T A;  3IR7 A;  2E7Z A;  3OUG A;  3GTO A;  1SIW A;  5FTN A;  1SMY D;  1R7R A;  1Y1W A;  2JA7 A;  2A69 D;  1I50 A;  1Q16 A;  1E60 A;  3GTP A;  1E18 A;  2YUJ A;  1AW8 B;  1E61 A;  2JIO A;  5FTJ A;  4AZD A;  1PQE A;  2DMR A;  2WAQ A;  1E32 A;  1PPY A;  3GTK A;  1PT1 A;  3GTL A;  2Y0S A;  3GTM A;  2C45 A;  5DYG A;  1TWG A;  2G5D A;  2WB1 A;  5B6C A;  3TIW A;  4DMR A;  1UHE A;  1CZ5 A;  2R7Z A;  3IR6 A;  2V45 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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