2G6GA

Crystal structure of mlta from neisseria gonorrhoeae
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
410
structure length
405
Chain Sequence
b'PDTSVINGPDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords GNA33
publication title Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
pubmed doi rcsb
source organism Neisseria gonorrhoeae fa 1090
molecule tags Hydrolase
total genus 95
structure length 405
sequence length 410
ec nomenclature ec 3.2.1.-:
pdb deposition date 2006-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 2g6gA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 2g6gA02
1OA9A 1HD5A 2PJJA 1L8FA 3X2GA 2BH0A 4AVRA 4JP6A 3SUKA 3SULA 3SUJA 3X2MA 2PNWA 5GLXA 1BW3A 1WC2A 4JP7A 1BW4A 5GM9A 3X2NA 4FG4A 4FERA 3X2LA 3CZBA 3M3GA 3ENGA 3X2JA 2ENGA 3X2PA 2AE0X 3D30A 2HCZX 3X2HA 3X2OA 4FG2A 3X2KA 4JS7A 4ZM7A 3SUMA 2G6GA 2PICA 5GLYA 4JCWA 3X2IA 4L48A 1OA7A 2GAEA 2KQAA 5H4UA 4ENGA 2PI8A 2G5DA 4JJOA 4FFTA 1N10A
chains in the Genus database with same CATH superfamily
3TIWA 5T5MD 1QRSA 1YNJD 5GLXA 1G8JA 1TMOA 1BW3A 1WC2A 1TWFA 1ZYRD 5EPPA 1K83A 5GM9A 1BW4A 4UY88 3HKZA 1WLFA 4FERA 4QIWA 4AONB 3X1LB 1AW8B 3IR7A 4L69A 1R7RA 1OGYA 1AA6A 2JIQA 4H3SA 2Y0SA 5T5ID 1I50A 3ML1A 4P2BA 2WB1A 3X2HA 4AYBA 5GAGW 3OUGA 3DLLS 4JS7A 4KDLA 3SUMA 1E5VA 2NYAA 5FTNA 4ZM7A 1SIWA 4KDIA 4CRYG 4JCWA 2ZJPS 1OA7A 3GTLA 1PPYA 5GADW 1QRTA 2ZJRS 1Z85A 3CF5S 4IO9S 1EU1A 1VC3B 3KW2A 4KODA 1FEUA 2NWAA 2B63A 3W2WB 5FTKA 2E2IA 2R7ZA 1L8FA 1TWCA 5FTMA 3TM7B 2VUMA 1Y5IA 1PYQA 3IR6A 5DYGA 3X2MA 4J3CA 1E32A 2R92A 1H5NA 1O0BA 4IOAS 5JVGS 4RV0A 4FG4A 1GTSA 2JIMA 3GTKA 3GTMA 1KQGA 1QCSA 4NOHA 1CR5A 3X2JA 3GTOA 3PLXB 4JYZA 1R27A 2VPXA 4AOKB 1R9TA 3D30A 2HZ7A 1IW7D 1Y1VA 3GTGA 2IV2X 5HL7S 2WAQA 1TWHA 2YU9A 5BNZA 4WFBS 2G6GA 2V45A 1FDOA 2JA7A 2JA6A 3PIOS 4GA5A 2VPZA 2E7ZA 3O5AA 2KQAA 5H4UA 3GTPA 1DFUP 1E60A 1YLEA 2A68D 1V6ZA 2PI8A 5C1BA 2BE5D 1WCMA 4JJOA 4FFTA 3X2IA 2RD2A 1TWGA 4JXXA 1EUYA 1HD5A 1EXDA 3X2GA 2ZJQS 1CZ4A 1UHEA 2BH0A 3QQ8A 1Y1WA 2EGWA 3QWZA 1E18A 1ZJWA 1Y4ZA 2PMZA 1NXZA 4H4KA 3FKIA 1DMRA 4WFAS 2DMRA 2NAPA 4WFNS 5FTJA 1E61A 3QC8A 1PQFA 5GAEW 4IOCS 5GAHW 1PQEA 2R93A 5C18A 2JIRA 2ENGA 1O0CA 3QQ7A 4KO8A 5JVHS 2E2HA 2AE0X 2CW0D 1FDIA 1DMSA 2HCZX 1EUQA 1UHDA 4CS0A 3X2OA 2NVXA 4FG2A 3X2KA 1B75A 3GTQA 4AAYA 1D6KA 2PICA 1G8KA 2V3VA 5GLYA 3HU3A 4U67S 4D7ZB 2JA5A 4KLNA 1VHKA 2C45A 1GTRA 4E8BA 2G5DA 1PQHA 3HU2A 3H0GA 4C2MA 2O5JD 1OA9A 2PJJA 1H0HA 2PJHB 3AIIA 2KI8A 1Q16A 5FTLA 4AVRA 4JP6A 3SUKA 2JIPA 2EEOB 3IR5A 3SULA 3SUJA 1ZC1A 2PNWA 4CRZA 1I3QA 2Z0YA 1TWAA 4JP7A 3CQZA 1SFOA 1PT0A 2RE8A 3X2NA 1UDXA 5IZNA 3X2LA 3CZBA 3M3GA 5DYIA 1NYLA 3ENGA 5GLFA 5DM6S 1QRUA 1QTQA 5B6CA 2JIOA 5DM7S 4JXZA 3X2PA 2CX8A 1PYUB 2VPYA 1PT1A 3PIPS 1SMYD 1CZ5A 4V194 3DMRA 2A6ED 3GTJA 1S3SA 2YUJA 3W2VB 4WF9S 3J7ZV 4GA6A 2GAEA 3HU1A 2A6HD 4L48A 2NVYA 4DMRA 3CF2A 2EGVA 4WCES 4AZDA 2A69D 1VHYA 1KQFA 2VPWA 1QDNA 4ENGA 1N10A 1YNND
chains in the Genus database with same CATH topology
3TIWA 5T5MD 1YNJD 5GLXA 1G8JA 1TMOA 1BW3A 1WC2A 1TWFA 1ZYRD 1BW4A 5EPPA 5GM9A 1K83A 3HKZA 4FERA 1WLFA 4QIWA 4AONB 1AW8B 3IR7A 1R7RA 1OGYA 1AA6A 2JIQA 2Y0SA 5T5ID 1I50A 3ML1A 2WB1A 3X2HA 4AYBA 3OUGA 4JS7A 4ZM7A 3SUMA 1E5VA 2NYAA 4KDLA 5FTNA 1SIWA 1N10A 4KDIA 4JCWA 4CRYG 1OA7A 3GTLA 1PPYA 1EU1A 1VC3B 4KODA 2B63A 5FTKA 2E2IA 2R7ZA 1L8FA 1TWCA 5FTMA 3TM7B 2VUMA 1Y5IA 1PYQA 3IR6A 5DYGA 3X2MA 1E32A 2R92A 1H5NA 4RV0A 4FG4A 2JIMA 3GTKA 3GTMA 1KQGA 1QCSA 4NOHA 1CR5A 3X2JA 3GTOA 3PLXB 1R27A 2VPXA 4AOKB 1R9TA 3D30A 1IW7D 1Y1VA 3GTGA 2IV2X 2WAQA 1TWHA 2YU9A 2G6GA 2V45A 1FDOA 2JA7A 2JA6A 4GA5A 2VPZA 2E7ZA 3O5AA 2KQAA 5H4UA 3GTPA 1E60A 1YLEA 2A68D 2PI8A 5C1BA 2BE5D 1WCMA 4JJOA 3X2IA 4FFTA 1TWGA 1HD5A 3X2GA 1CZ4A 1UHEA 2BH0A 3QQ8A 1Y1WA 3QWZA 1E18A 1Y4ZA 2PMZA 3FKIA 1DMRA 2DMRA 2NAPA 5FTJA 1E61A 3QC8A 1PQFA 1PQEA 2R93A 5C18A 2JIRA 2ENGA 3QQ7A 4KO8A 2E2HA 2AE0X 2CW0D 1FDIA 2HCZX 1DMSA 1UHDA 4CS0A 3X2OA 2NVXA 4FG2A 3X2KA 3GTQA 4AAYA 2PICA 5GLYA 2V3VA 3HU3A 4D7ZB 2JA5A 4KLNA 2C45A 2G5DA 1PQHA 3HU2A 3H0GA 4C2MA 2O5JD 1OA9A 2PJJA 1H0HA 2PJHB 2KI8A 1Q16A 5FTLA 4AVRA 4JP6A 3SUKA 2JIPA 2EEOB 3IR5A 3SULA 3SUJA 2PNWA 1ZC1A 4CRZA 1I3QA 4JP7A 1TWAA 3CQZA 1SFOA 1PT0A 3X2NA 3X2LA 3CZBA 3M3GA 5DYIA 3ENGA 5GLFA 5B6CA 2JIOA 3X2PA 1PYUB 2VPYA 1PT1A 1SMYD 1CZ5A 3DMRA 2A6ED 3GTJA 1S3SA 2YUJA 4L48A 2GAEA 3HU1A 2A6HD 4GA6A 2NVYA 4DMRA 3CF2A 4AZDA 2A69D 1KQFA 2VPWA 1QDNA 4ENGA 1G8KA 1YNND
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OA9 A;  1HD5 A;  2PJJ A;  1L8F A;  3X2G A;  2BH0 A;  4AVR A;  4JP6 A;  3SUK A;  3SUL A;  3SUJ A;  3X2M A;  2PNW A;  5GLX A;  1BW3 A;  1WC2 A;  4JP7 A;  1BW4 A;  5GM9 A;  3X2N A;  4FG4 A;  4FER A;  3X2L A;  3CZB A;  3M3G A;  3ENG A;  3X2J A;  2ENG A;  3X2P A;  2AE0 X;  3D30 A;  2HCZ X;  3X2H A;  3X2O A;  4FG2 A;  3X2K A;  4JS7 A;  4ZM7 A;  3SUM A;  2G6G A;  2PIC A;  5GLY A;  4JCW A;  3X2I A;  4L48 A;  1OA7 A;  2GAE A;  2KQA A;  5H4U A;  4ENG A;  2PI8 A;  2G5D A;  4JJO A;  4FFT A;  1N10 A; 
#chains in the Genus database with same CATH topology
 3TIW A;  5T5M D;  1QRS A;  1YNJ D;  5GLX A;  1G8J A;  1TMO A;  1BW3 A;  1WC2 A;  1TWF A;  1ZYR D;  5EPP A;  1K83 A;  5GM9 A;  1BW4 A;  4UY8 8;  3HKZ A;  1WLF A;  4FER A;  4QIW A;  4AON B;  3X1L B;  1AW8 B;  3IR7 A;  4L69 A;  1R7R A;  1OGY A;  1AA6 A;  2JIQ A;  4H3S A;  2Y0S A;  5T5I D;  1I50 A;  3ML1 A;  4P2B A;  2WB1 A;  3X2H A;  4AYB A;  5GAG W;  3OUG A;  3DLL S;  4JS7 A;  4KDL A;  3SUM A;  1E5V A;  2NYA A;  5FTN A;  4ZM7 A;  1SIW A;  4KDI A;  4CRY G;  4JCW A;  2ZJP S;  1OA7 A;  3GTL A;  1PPY A;  5GAD W;  1QRT A;  2ZJR S;  1Z85 A;  3CF5 S;  4IO9 S;  1EU1 A;  1VC3 B;  3KW2 A;  4KOD A;  1FEU A;  2NWA A;  2B63 A;  3W2W B;  5FTK A;  2E2I A;  2R7Z A;  1L8F A;  1TWC A;  5FTM A;  3TM7 B;  2VUM A;  1Y5I A;  1PYQ A;  3IR6 A;  5DYG A;  3X2M A;  4J3C A;  1E32 A;  2R92 A;  1H5N A;  1O0B A;  4IOA S;  5JVG S;  4RV0 A;  4FG4 A;  1GTS A;  2JIM A;  3GTK A;  3GTM A;  1KQG A;  1QCS A;  4NOH A;  1CR5 A;  3X2J A;  3GTO A;  3PLX B;  4JYZ A;  1R27 A;  2VPX A;  4AOK B;  1R9T A;  3D30 A;  2HZ7 A;  1IW7 D;  1Y1V A;  3GTG A;  2IV2 X;  5HL7 S;  2WAQ A;  1TWH A;  2YU9 A;  5BNZ A;  4WFB S;  2G6G A;  2V45 A;  1FDO A;  2JA7 A;  2JA6 A;  3PIO S;  4GA5 A;  2VPZ A;  2E7Z A;  3O5A A;  2KQA A;  5H4U A;  3GTP A;  1DFU P;  1E60 A;  1YLE A;  2A68 D;  1V6Z A;  2PI8 A;  5C1B A;  2BE5 D;  1WCM A;  4JJO A;  4FFT A;  3X2I A;  2RD2 A;  1TWG A;  4JXX A;  1EUY A;  1HD5 A;  1EXD A;  3X2G A;  2ZJQ S;  1CZ4 A;  1UHE A;  2BH0 A;  3QQ8 A;  1Y1W A;  2EGW A;  3QWZ A;  1E18 A;  1ZJW A;  1Y4Z A;  2PMZ A;  1NXZ A;  4H4K A;  3FKI A;  1DMR A;  4WFA S;  2DMR A;  2NAP A;  4WFN S;  5FTJ A;  1E61 A;  3QC8 A;  1PQF A;  5GAE W;  4IOC S;  5GAH W;  1PQE A;  2R93 A;  5C18 A;  2JIR A;  2ENG A;  1O0C A;  3QQ7 A;  4KO8 A;  5JVH S;  2E2H A;  2AE0 X;  2CW0 D;  1FDI A;  1DMS A;  2HCZ X;  1EUQ A;  1UHD A;  4CS0 A;  3X2O A;  2NVX A;  4FG2 A;  3X2K A;  1B75 A;  3GTQ A;  4AAY A;  1D6K A;  2PIC A;  1G8K A;  2V3V A;  5GLY A;  3HU3 A;  4U67 S;  4D7Z B;  2JA5 A;  4KLN A;  1VHK A;  2C45 A;  1GTR A;  4E8B A;  2G5D A;  1PQH A;  3HU2 A;  3H0G A;  4C2M A;  2O5J D;  1OA9 A;  2PJJ A;  1H0H A;  2PJH B;  3AII A;  2KI8 A;  1Q16 A;  5FTL A;  4AVR A;  4JP6 A;  3SUK A;  2JIP A;  2EEO B;  3IR5 A;  3SUL A;  3SUJ A;  1ZC1 A;  2PNW A;  4CRZ A;  1I3Q A;  2Z0Y A;  1TWA A;  4JP7 A;  3CQZ A;  1SFO A;  1PT0 A;  2RE8 A;  3X2N A;  1UDX A;  5IZN A;  3X2L A;  3CZB A;  3M3G A;  5DYI A;  1NYL A;  3ENG A;  5GLF A;  5DM6 S;  1QRU A;  1QTQ A;  5B6C A;  2JIO A;  5DM7 S;  4JXZ A;  3X2P A;  2CX8 A;  1PYU B;  2VPY A;  1PT1 A;  3PIP S;  1SMY D;  1CZ5 A;  4V19 4;  3DMR A;  2A6E D;  3GTJ A;  1S3S A;  2YUJ A;  3W2V B;  4WF9 S;  3J7Z V;  4GA6 A;  2GAE A;  3HU1 A;  2A6H D;  4L48 A;  2NVY A;  4DMR A;  3CF2 A;  2EGV A;  4WCE S;  4AZD A;  2A69 D;  1VHY A;  1KQF A;  2VPW A;  1QDN A;  4ENG A;  1N10 A;  1YNN D; 
#chains in the Genus database with same CATH homology
 3TIW A;  5T5M D;  1YNJ D;  5GLX A;  1G8J A;  1TMO A;  1BW3 A;  1WC2 A;  1TWF A;  1ZYR D;  1BW4 A;  5EPP A;  5GM9 A;  1K83 A;  3HKZ A;  4FER A;  1WLF A;  4QIW A;  4AON B;  1AW8 B;  3IR7 A;  1R7R A;  1OGY A;  1AA6 A;  2JIQ A;  2Y0S A;  5T5I D;  1I50 A;  3ML1 A;  2WB1 A;  3X2H A;  4AYB A;  3OUG A;  4JS7 A;  4ZM7 A;  3SUM A;  1E5V A;  2NYA A;  4KDL A;  5FTN A;  1SIW A;  1N10 A;  4KDI A;  4JCW A;  4CRY G;  1OA7 A;  3GTL A;  1PPY A;  1EU1 A;  1VC3 B;  4KOD A;  2B63 A;  5FTK A;  2E2I A;  2R7Z A;  1L8F A;  1TWC A;  5FTM A;  3TM7 B;  2VUM A;  1Y5I A;  1PYQ A;  3IR6 A;  5DYG A;  3X2M A;  1E32 A;  2R92 A;  1H5N A;  4RV0 A;  4FG4 A;  2JIM A;  3GTK A;  3GTM A;  1KQG A;  1QCS A;  4NOH A;  1CR5 A;  3X2J A;  3GTO A;  3PLX B;  1R27 A;  2VPX A;  4AOK B;  1R9T A;  3D30 A;  1IW7 D;  1Y1V A;  3GTG A;  2IV2 X;  2WAQ A;  1TWH A;  2YU9 A;  2G6G A;  2V45 A;  1FDO A;  2JA7 A;  2JA6 A;  4GA5 A;  2VPZ A;  2E7Z A;  3O5A A;  2KQA A;  5H4U A;  3GTP A;  1E60 A;  1YLE A;  2A68 D;  2PI8 A;  5C1B A;  2BE5 D;  1WCM A;  4JJO A;  3X2I A;  4FFT A;  1TWG A;  1HD5 A;  3X2G A;  1CZ4 A;  1UHE A;  2BH0 A;  3QQ8 A;  1Y1W A;  3QWZ A;  1E18 A;  1Y4Z A;  2PMZ A;  3FKI A;  1DMR A;  2DMR A;  2NAP A;  5FTJ A;  1E61 A;  3QC8 A;  1PQF A;  1PQE A;  2R93 A;  5C18 A;  2JIR A;  2ENG A;  3QQ7 A;  4KO8 A;  2E2H A;  2AE0 X;  2CW0 D;  1FDI A;  2HCZ X;  1DMS A;  1UHD A;  4CS0 A;  3X2O A;  2NVX A;  4FG2 A;  3X2K A;  3GTQ A;  4AAY A;  2PIC A;  5GLY A;  2V3V A;  3HU3 A;  4D7Z B;  2JA5 A;  4KLN A;  2C45 A;  2G5D A;  1PQH A;  3HU2 A;  3H0G A;  4C2M A;  2O5J D;  1OA9 A;  2PJJ A;  1H0H A;  2PJH B;  2KI8 A;  1Q16 A;  5FTL A;  4AVR A;  4JP6 A;  3SUK A;  2JIP A;  2EEO B;  3IR5 A;  3SUL A;  3SUJ A;  2PNW A;  1ZC1 A;  4CRZ A;  1I3Q A;  4JP7 A;  1TWA A;  3CQZ A;  1SFO A;  1PT0 A;  3X2N A;  3X2L A;  3CZB A;  3M3G A;  5DYI A;  3ENG A;  5GLF A;  5B6C A;  2JIO A;  3X2P A;  1PYU B;  2VPY A;  1PT1 A;  1SMY D;  1CZ5 A;  3DMR A;  2A6E D;  3GTJ A;  1S3S A;  2YUJ A;  4L48 A;  2GAE A;  3HU1 A;  2A6H D;  4GA6 A;  2NVY A;  4DMR A;  3CF2 A;  4AZD A;  2A69 D;  1KQF A;  2VPW A;  1QDN A;  4ENG A;  1G8K A;  1YNN D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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