2G6GA

Crystal structure of mlta from neisseria gonorrhoeae
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
410
structure length
405
Chain Sequence
PDTSVINGPDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords GNA33
publication title Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
pubmed doi rcsb
source organism Neisseria gonorrhoeae fa 1090
total genus 95
structure length 405
sequence length 410
ec nomenclature ec 3.2.1.-:
pdb deposition date 2006-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 2g6gA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 2g6gA02
1OA9A 4JS7A 2G6GA 4JJOA 3SUMA 4FG2A 3CZBA 2HCZX 3SULA 3M3GA 3X2IA 4FFTA 3X2HA 4ENGA 1N10A 2PJJA 2PNWA 3ENGA 1BW4A 2PICA 3SUJA 4L48A 1HD5A 5GLYA 4FG4A 2KQAA 3X2GA 1OA7A 4JCWA 3X2MA 5H4UA 3X2LA 3X2JA 5GLXA 3SUKA 4JP6A 2G5DA 2PI8A 2AE0X 3D30A 4JP7A 3X2KA 3X2OA 1L8FA 3X2PA 2BH0A 2GAEA 4FERA 2ENGA 5GM9A 3X2NA 4ZM7A 4AVRA 1BW3A 1WC2A
chains in the Genus database with same CATH superfamily
4KO8A 4JS7A 4WFBS 2A6HD 4P2BA 1ZJWA 4H3SA 4FG2A 4AZDA 2HCZX 3H0GA 1CZ5A 3AIIA 3SULA 1DMRA 3QQ7A 2ZJRS 3HU3A 4NOHA 2JA5A 4CRYG 2R93A 2EEOB 1NXZA 3IR5A 1PQHA 2WB1A 1HD5A 2R92A 1PPYA 1EXDA 2C45A 2VPZA 5GLYA 1UDXA 1EUQA 1K83A 1QDNA 1R27A 2Y0SA 4JCWA 5BNZA 3X2MA 2Z0YA 3PLXB 1Y4ZA 1H5NA 1YNJD 3TIWA 1PQFA 3GTMA 4U67S 2AE0X 3HU2A 3X2OA 2YU9A 4IO9S 1L8FA 3OUGA 2BH0A 4C2MA 4H4KA 2NWAA 2GAEA 1FEUA 2ENGA 3QQ8A 4WFNS 2JA6A 1Y1VA 1B75A 1WC2A 1FDIA 2JA7A 2EGVA 4KDIA 3SUMA 5GAEW 1UHDA 4KLNA 2O5JD 1SIWA 1Z85A 1OGYA 5GADW 2VPXA 2IV2X 2EGWA 4DMRA 1ZYRD 2HZ7A 3M3GA 5EPPA 4IOAS 1PT1A 2CW0D 4FFTA 1N10A 4ENGA 2RE8A 4J3CA 5DYGA 2PNWA 1O0CA 3HKZA 1EUYA 3IR7A 1GTSA 1CR5A 5DM6S 2PJHB 1TMOA 2JIQA 3CF5S 1PQEA 3KW2A 1IW7D 4JXXA 2ZJPS 4WF9S 2NAPA 2PI8A 1TWFA 3CF2A 3X1LB 1V6ZA 1AW8B 3X2PA 2V3VA 1GTRA 4GA6A 2PMZA 3FKIA 3QWZA 4ZM7A 3J7ZV 1BW3A 1R9TA 1G8KA 2R7ZA 1VHYA 2ZJQS 1R7RA 1E60A 4JXZA 2JIRA 1E5VA 1UHEA 1VC3B 2NVYA 4AOKB 2JIPA 1ZC1A 3CZBA 1TWAA 2NVXA 1PT0A 4D7ZB 3X2HA 4AONB 4JYZA 1CZ4A 3ML1A 1AA6A 1I50A 3GTPA 2CX8A 3TM7B 1YNND 3GTGA 2NYAA 5FTMA 4L69A 1FDOA 5JVHS 1KQGA 1BW4A 2V45A 3SUJA 4L48A 1SFOA 1NYLA 1O0BA 1YLEA 1WCMA 2KQAA 4FG4A 4RV0A 3X2GA 4CS0A 3GTLA 3W2WB 4IOCS 1QRTA 1QRSA 2A69D 2WAQA 5GLXA 3SUKA 4JP6A 4KODA 2G5DA 1KQFA 3X2KA 2BE5D 1PYUB 3D30A 1I3QA 3GTQA 5GAHW 1WLFA 5T5ID 1SMYD 1Q16A 4KDLA 5T5MD 3GTKA 5FTNA 4FERA 1QCSA 5GM9A 1E18A 1Y5IA 3GTJA 1S3SA 2A68D 3DMRA 4WFAS 1TWHA 3W2VB 1E32A 1OA9A 5IZNA 2G6GA 1G8JA 1H0HA 4JJOA 2E2IA 2RD2A 3GTOA 4WCES 2VPWA 1VHKA 3HU1A 3X2IA 5FTLA 5DYIA 5DM7S 2DMRA 3IR6A 3PIOS 5GAGW 1DMSA 2PJJA 3QC8A 1TWGA 2JIMA 4E8BA 3ENGA 4AYBA 5B6CA 2VPYA 1TWCA 2PICA 4CRZA 5HL7S 1DFUP 2E7ZA 1EU1A 5C1BA 2B63A 3DLLS 1D6KA 1E61A 3CQZA 1OA7A 5FTKA 1QRUA 5H4UA 3X2LA 3X2JA 5JVGS 2E2HA 2KI8A 5GLFA 4JP7A 1QTQA 2JIOA 4QIWA 5FTJA 5C18A 4UY88 4V194 1Y1WA 2VUMA 3O5AA 2YUJA 4GA5A 3X2NA 3PIPS 4AAYA 4AVRA 2A6ED 1PYQA
chains in the Genus database with same CATH topology
4KO8A 4JS7A 2A6HD 4FG2A 4AZDA 2HCZX 3H0GA 1CZ5A 3SULA 1DMRA 3QQ7A 3HU3A 4NOHA 2JA5A 4CRYG 2R93A 2EEOB 3IR5A 1PQHA 2WB1A 1HD5A 2R92A 1PPYA 2C45A 5GLYA 2VPZA 1K83A 1QDNA 1R27A 2Y0SA 4JCWA 3X2MA 3PLXB 1Y4ZA 1H5NA 1YNJD 3TIWA 1PQFA 3GTMA 2AE0X 3HU2A 3X2OA 2YU9A 1L8FA 3OUGA 2BH0A 4C2MA 2GAEA 2ENGA 3QQ8A 2JA6A 1Y1VA 1WC2A 1FDIA 2JA7A 4KDIA 3SUMA 1UHDA 4KLNA 2O5JD 1SIWA 1OGYA 2VPXA 2IV2X 4DMRA 1ZYRD 3M3GA 5EPPA 4FFTA 4ENGA 1PT1A 1N10A 2CW0D 5DYGA 2PNWA 3HKZA 3IR7A 1CR5A 2PJHB 1TMOA 2JIQA 1PQEA 1IW7D 2NAPA 2PI8A 1TWFA 3CF2A 3X2PA 1AW8B 2V3VA 4GA6A 2PMZA 3FKIA 3QWZA 4ZM7A 1BW3A 1R9TA 1G8KA 2R7ZA 1R7RA 1E60A 2JIRA 1E5VA 1UHEA 1VC3B 2NVYA 4AOKB 3CZBA 1ZC1A 2JIPA 1TWAA 2NVXA 1PT0A 4D7ZB 3X2HA 4AONB 1CZ4A 3ML1A 1AA6A 1I50A 3GTPA 3TM7B 1YNND 3GTGA 2NYAA 5FTMA 1FDOA 1KQGA 1BW4A 2V45A 3SUJA 4L48A 1SFOA 4FG4A 1YLEA 2KQAA 1WCMA 3X2GA 4RV0A 4CS0A 3GTLA 5GLXA 2A69D 3SUKA 2WAQA 4JP6A 4KODA 2G5DA 1KQFA 3X2KA 2BE5D 3D30A 1PYUB 1I3QA 3GTQA 1WLFA 5T5ID 1SMYD 1Q16A 4KDLA 5T5MD 3GTKA 5FTNA 4FERA 5GM9A 1QCSA 1E18A 1Y5IA 3GTJA 1S3SA 2A68D 3DMRA 1TWHA 1OA9A 1E32A 2G6GA 4JJOA 1G8JA 1H0HA 2E2IA 3GTOA 2VPWA 3HU1A 3X2IA 5FTLA 5DYIA 2DMRA 3IR6A 2PJJA 1DMSA 3QC8A 1TWGA 2JIMA 3ENGA 4AYBA 5B6CA 2VPYA 2PICA 1TWCA 4CRZA 2E7ZA 1EU1A 5C1BA 2B63A 1E61A 3CQZA 1OA7A 5FTKA 5H4UA 3X2LA 3X2JA 2E2HA 2KI8A 5GLFA 4JP7A 2JIOA 4QIWA 5FTJA 5C18A 1Y1WA 2VUMA 3O5AA 2YUJA 4GA5A 3X2NA 4AAYA 4AVRA 2A6ED 1PYQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OA9 A;  4JS7 A;  2G6G A;  4JJO A;  3SUM A;  4FG2 A;  3CZB A;  2HCZ X;  3SUL A;  3M3G A;  3X2I A;  4FFT A;  3X2H A;  4ENG A;  1N10 A;  2PJJ A;  2PNW A;  3ENG A;  1BW4 A;  2PIC A;  3SUJ A;  4L48 A;  1HD5 A;  5GLY A;  4FG4 A;  2KQA A;  3X2G A;  1OA7 A;  4JCW A;  3X2M A;  5H4U A;  3X2L A;  3X2J A;  5GLX A;  3SUK A;  4JP6 A;  2G5D A;  2PI8 A;  2AE0 X;  3D30 A;  4JP7 A;  3X2K A;  3X2O A;  1L8F A;  3X2P A;  2BH0 A;  2GAE A;  4FER A;  2ENG A;  5GM9 A;  3X2N A;  4ZM7 A;  4AVR A;  1BW3 A;  1WC2 A; 
#chains in the Genus database with same CATH topology
 4KO8 A;  4JS7 A;  4WFB S;  2A6H D;  4P2B A;  1ZJW A;  4H3S A;  4FG2 A;  4AZD A;  2HCZ X;  3H0G A;  1CZ5 A;  3AII A;  3SUL A;  1DMR A;  3QQ7 A;  2ZJR S;  3HU3 A;  4NOH A;  2JA5 A;  4CRY G;  2R93 A;  2EEO B;  1NXZ A;  3IR5 A;  1PQH A;  2WB1 A;  1HD5 A;  2R92 A;  1PPY A;  1EXD A;  2C45 A;  2VPZ A;  5GLY A;  1UDX A;  1EUQ A;  1K83 A;  1QDN A;  1R27 A;  2Y0S A;  4JCW A;  5BNZ A;  3X2M A;  2Z0Y A;  3PLX B;  1Y4Z A;  1H5N A;  1YNJ D;  3TIW A;  1PQF A;  3GTM A;  4U67 S;  2AE0 X;  3HU2 A;  3X2O A;  2YU9 A;  4IO9 S;  1L8F A;  3OUG A;  2BH0 A;  4C2M A;  4H4K A;  2NWA A;  2GAE A;  1FEU A;  2ENG A;  3QQ8 A;  4WFN S;  2JA6 A;  1Y1V A;  1B75 A;  1WC2 A;  1FDI A;  2JA7 A;  2EGV A;  4KDI A;  3SUM A;  5GAE W;  1UHD A;  4KLN A;  2O5J D;  1SIW A;  1Z85 A;  1OGY A;  5GAD W;  2VPX A;  2IV2 X;  2EGW A;  4DMR A;  1ZYR D;  2HZ7 A;  3M3G A;  5EPP A;  4IOA S;  1PT1 A;  2CW0 D;  4FFT A;  1N10 A;  4ENG A;  2RE8 A;  4J3C A;  5DYG A;  2PNW A;  1O0C A;  3HKZ A;  1EUY A;  3IR7 A;  1GTS A;  1CR5 A;  5DM6 S;  2PJH B;  1TMO A;  2JIQ A;  3CF5 S;  1PQE A;  3KW2 A;  1IW7 D;  4JXX A;  2ZJP S;  4WF9 S;  2NAP A;  2PI8 A;  1TWF A;  3CF2 A;  3X1L B;  1V6Z A;  1AW8 B;  3X2P A;  2V3V A;  1GTR A;  4GA6 A;  2PMZ A;  3FKI A;  3QWZ A;  4ZM7 A;  3J7Z V;  1BW3 A;  1R9T A;  1G8K A;  2R7Z A;  1VHY A;  2ZJQ S;  1R7R A;  1E60 A;  4JXZ A;  2JIR A;  1E5V A;  1UHE A;  1VC3 B;  2NVY A;  4AOK B;  2JIP A;  1ZC1 A;  3CZB A;  1TWA A;  2NVX A;  1PT0 A;  4D7Z B;  3X2H A;  4AON B;  4JYZ A;  1CZ4 A;  3ML1 A;  1AA6 A;  1I50 A;  3GTP A;  2CX8 A;  3TM7 B;  1YNN D;  3GTG A;  2NYA A;  5FTM A;  4L69 A;  1FDO A;  5JVH S;  1KQG A;  1BW4 A;  2V45 A;  3SUJ A;  4L48 A;  1SFO A;  1NYL A;  1O0B A;  1YLE A;  1WCM A;  2KQA A;  4FG4 A;  4RV0 A;  3X2G A;  4CS0 A;  3GTL A;  3W2W B;  4IOC S;  1QRT A;  1QRS A;  2A69 D;  2WAQ A;  5GLX A;  3SUK A;  4JP6 A;  4KOD A;  2G5D A;  1KQF A;  3X2K A;  2BE5 D;  1PYU B;  3D30 A;  1I3Q A;  3GTQ A;  5GAH W;  1WLF A;  5T5I D;  1SMY D;  1Q16 A;  4KDL A;  5T5M D;  3GTK A;  5FTN A;  4FER A;  1QCS A;  5GM9 A;  1E18 A;  1Y5I A;  3GTJ A;  1S3S A;  2A68 D;  3DMR A;  4WFA S;  1TWH A;  3W2V B;  1E32 A;  1OA9 A;  5IZN A;  2G6G A;  1G8J A;  1H0H A;  4JJO A;  2E2I A;  2RD2 A;  3GTO A;  4WCE S;  2VPW A;  1VHK A;  3HU1 A;  3X2I A;  5FTL A;  5DYI A;  5DM7 S;  2DMR A;  3IR6 A;  3PIO S;  5GAG W;  1DMS A;  2PJJ A;  3QC8 A;  1TWG A;  2JIM A;  4E8B A;  3ENG A;  4AYB A;  5B6C A;  2VPY A;  1TWC A;  2PIC A;  4CRZ A;  5HL7 S;  1DFU P;  2E7Z A;  1EU1 A;  5C1B A;  2B63 A;  3DLL S;  1D6K A;  1E61 A;  3CQZ A;  1OA7 A;  5FTK A;  1QRU A;  5H4U A;  3X2L A;  3X2J A;  5JVG S;  2E2H A;  2KI8 A;  5GLF A;  4JP7 A;  1QTQ A;  2JIO A;  4QIW A;  5FTJ A;  5C18 A;  4UY8 8;  4V19 4;  1Y1W A;  2VUM A;  3O5A A;  2YUJ A;  4GA5 A;  3X2N A;  3PIP S;  4AAY A;  4AVR A;  2A6E D;  1PYQ A; 
#chains in the Genus database with same CATH homology
 4KO8 A;  4JS7 A;  2A6H D;  4FG2 A;  4AZD A;  2HCZ X;  3H0G A;  1CZ5 A;  3SUL A;  1DMR A;  3QQ7 A;  3HU3 A;  4NOH A;  2JA5 A;  4CRY G;  2R93 A;  2EEO B;  3IR5 A;  1PQH A;  2WB1 A;  1HD5 A;  2R92 A;  1PPY A;  2C45 A;  5GLY A;  2VPZ A;  1K83 A;  1QDN A;  1R27 A;  2Y0S A;  4JCW A;  3X2M A;  3PLX B;  1Y4Z A;  1H5N A;  1YNJ D;  3TIW A;  1PQF A;  3GTM A;  2AE0 X;  3HU2 A;  3X2O A;  2YU9 A;  1L8F A;  3OUG A;  2BH0 A;  4C2M A;  2GAE A;  2ENG A;  3QQ8 A;  2JA6 A;  1Y1V A;  1WC2 A;  1FDI A;  2JA7 A;  4KDI A;  3SUM A;  1UHD A;  4KLN A;  2O5J D;  1SIW A;  1OGY A;  2VPX A;  2IV2 X;  4DMR A;  1ZYR D;  3M3G A;  5EPP A;  4FFT A;  4ENG A;  1PT1 A;  1N10 A;  2CW0 D;  5DYG A;  2PNW A;  3HKZ A;  3IR7 A;  1CR5 A;  2PJH B;  1TMO A;  2JIQ A;  1PQE A;  1IW7 D;  2NAP A;  2PI8 A;  1TWF A;  3CF2 A;  3X2P A;  1AW8 B;  2V3V A;  4GA6 A;  2PMZ A;  3FKI A;  3QWZ A;  4ZM7 A;  1BW3 A;  1R9T A;  1G8K A;  2R7Z A;  1R7R A;  1E60 A;  2JIR A;  1E5V A;  1UHE A;  1VC3 B;  2NVY A;  4AOK B;  3CZB A;  1ZC1 A;  2JIP A;  1TWA A;  2NVX A;  1PT0 A;  4D7Z B;  3X2H A;  4AON B;  1CZ4 A;  3ML1 A;  1AA6 A;  1I50 A;  3GTP A;  3TM7 B;  1YNN D;  3GTG A;  2NYA A;  5FTM A;  1FDO A;  1KQG A;  1BW4 A;  2V45 A;  3SUJ A;  4L48 A;  1SFO A;  4FG4 A;  1YLE A;  2KQA A;  1WCM A;  3X2G A;  4RV0 A;  4CS0 A;  3GTL A;  5GLX A;  2A69 D;  3SUK A;  2WAQ A;  4JP6 A;  4KOD A;  2G5D A;  1KQF A;  3X2K A;  2BE5 D;  3D30 A;  1PYU B;  1I3Q A;  3GTQ A;  1WLF A;  5T5I D;  1SMY D;  1Q16 A;  4KDL A;  5T5M D;  3GTK A;  5FTN A;  4FER A;  5GM9 A;  1QCS A;  1E18 A;  1Y5I A;  3GTJ A;  1S3S A;  2A68 D;  3DMR A;  1TWH A;  1OA9 A;  1E32 A;  2G6G A;  4JJO A;  1G8J A;  1H0H A;  2E2I A;  3GTO A;  2VPW A;  3HU1 A;  3X2I A;  5FTL A;  5DYI A;  2DMR A;  3IR6 A;  2PJJ A;  1DMS A;  3QC8 A;  1TWG A;  2JIM A;  3ENG A;  4AYB A;  5B6C A;  2VPY A;  2PIC A;  1TWC A;  4CRZ A;  2E7Z A;  1EU1 A;  5C1B A;  2B63 A;  1E61 A;  3CQZ A;  1OA7 A;  5FTK A;  5H4U A;  3X2L A;  3X2J A;  2E2H A;  2KI8 A;  5GLF A;  4JP7 A;  2JIO A;  4QIW A;  5FTJ A;  5C18 A;  1Y1W A;  2VUM A;  3O5A A;  2YUJ A;  4GA5 A;  3X2N A;  4AAY A;  4AVR A;  2A6E D;  1PYQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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