2G6GA

Crystal structure of mlta from neisseria gonorrhoeae
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
410
structure length
405
Chain Sequence
PDTSVINGPDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
pubmed doi rcsb
source organism Neisseria gonorrhoeae fa 1090
molecule tags Hydrolase
molecule keywords GNA33
total genus 95
structure length 405
sequence length 410
ec nomenclature ec 3.2.1.-:
pdb deposition date 2006-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 2g6gA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 2g6gA02
2PICA 4L48A 3M3GA 3CZBA 3X2NA 3SUMA 5H4UA 5GLXA 2KQAA 4FERA 4FFTA 2GAEA 2G5DA 3X2JA 3X2MA 4JJOA 4FG2A 3X2GA 2AE0X 1BW4A 2HCZX 3SUKA 1L8FA 3X2LA 2PJJA 3ENGA 3X2OA 4ZM7A 1OA9A 5GLYA 1N10A 4AVRA 2BH0A 4JCWA 3SUJA 4FG4A 3X2KA 4JP7A 4JP6A 3X2PA 2G6GA 1OA7A 5GM9A 3SULA 2ENGA 3X2IA 4JS7A 3X2HA 1HD5A 3D30A 2PI8A 1BW3A 4ENGA 2PNWA 1WC2A
chains in the Genus database with same CATH superfamily
4CRYG 2NYAA 1Y1WA 3X2NA 1SMYD 2VPWA 2A6HD 4KLNA 5EPPA 1I50A 4H3SA 4C2MA 3W2VB 5B6CA 2ZJRS 2GAEA 2HZ7A 1B75A 2JIMA 3HKZA 1AW8B 1QDNA 1NXZA 2VPZA 5GAGW 4KDIA 3AIIA 1TWCA 1CZ4A 3IR5A 4RV0A 2A6ED 1L8FA 3O5AA 1SIWA 3X2OA 3GTQA 1KQGA 2JIQA 1Y4ZA 1DMRA 5DM7S 3W2WB 4JCWA 3DLLS 3QQ8A 4GA6A 1VHYA 2Z0YA 3SULA 1GTRA 1E32A 3PLXB 1DFUP 1Y1VA 5FTMA 1I3QA 1BW3A 1ZC1A 4J3CA 1NYLA 2C45A 1PYQA 1H0HA 4QIWA 1TWGA 2E7ZA 1WC2A 1E18A 1TWAA 2V45A 1KQFA 4E8BA 1R7RA 4WFBS 4AZDA 4L48A 3ML1A 3M3GA 4DMRA 5T5MD 1O0CA 1Y5IA 1YNND 5DYGA 3SUMA 2VUMA 4JXXA 1PYUB 5GLXA 1EU1A 3IR6A 4FERA 3GTGA 3GTKA 2E2HA 4P2BA 4JYZA 1EUYA 2CX8A 3GTMA 3IR7A 4D7ZB 5HL7S 1H5NA 2VPXA 2PMZA 3X2GA 1YLEA 2VPYA 1BW4A 1UDXA 5GAEW 1WLFA 3X2LA 2YU9A 4KO8A 1QRSA 2RE8A 2RD2A 1OA9A 2B63A 1PT0A 2NAPA 2O5JD 3X2PA 3X2KA 4NOHA 3CQZA 2G6GA 1UHEA 5GM9A 1EUQA 2ENGA 5FTNA 3X2IA 3X2HA 4JXZA 4CS0A 4IOCS 1IW7D 2PI8A 2IV2X 4ENGA 2R7ZA 1PQFA 1Z85A 3CF5S 1QRUA 2A69D 5DM6S 1V6ZA 3GTJA 2JIOA 3X2JA 3J7ZV 3PIPS 2ZJPS 2PICA 3CZBA 2NVYA 3X1LB 5FTJA 1YNJD 5H4UA 5C1BA 1WCMA 4FFTA 4AAYA 2R92A 1O0BA 1ZYRD 3OUGA 1CZ5A 5C18A 1PQEA 1PT1A 4V194 3HU1A 2NWAA 1G8JA 2PJHB 2WB1A 3DMRA 4JJOA 3X2MA 4FG2A 3GTLA 2CW0D 3CF2A 1QRTA 2HCZX 1K83A 2PJJA 2YUJA 3ENGA 4ZM7A 4WFNS 5GLYA 2EGWA 1N10A 3TM7B 1UHDA 1FEUA 4FG4A 4U67S 1PPYA 5DYIA 2R93A 4CRZA 4WCES 1GTSA 4AONB 2JA5A 4H4KA 4L69A 1QCSA 2JIRA 1G8KA 1HD5A 1ZJWA 1E61A 2DMRA 2WAQA 1R9TA 1Q16A 4AYBA 1TMOA 1CR5A 3QQ7A 4KDLA 3TIWA 3QWZA 5T5ID 1QTQA 1E5VA 1OGYA 2ZJQS 1FDIA 2NVXA 1E60A 3PIOS 1R27A 1TWHA 4IO9S 2KQAA 3HU3A 2Y0SA 1AA6A 4WF9S 2JA7A 1FDOA 2G5DA 4AOKB 2A68D 1DMSA 5IZNA 2JA6A 2JIPA 2E2IA 1VC3B 4KODA 2EEOB 3GTPA 2AE0X 3QC8A 4WFAS 3SUKA 4UY88 2KI8A 3H0GA 2BE5D 1PQHA 2V3VA 5GLFA 3KW2A 2EGVA 3GTOA 1S3SA 4AVRA 2BH0A 5GADW 3SUJA 4JP7A 4JP6A 3HU2A 1OA7A 5JVHS 5BNZA 4IOAS 1D6KA 4JS7A 5GAHW 3D30A 4GA5A 5JVGS 1TWFA 2PNWA 3FKIA 1VHKA 5FTKA 1SFOA 1EXDA 5FTLA
chains in the Genus database with same CATH topology
4CRYG 2NYAA 1Y1WA 3X2NA 1SMYD 2VPWA 2A6HD 4KLNA 5EPPA 1I50A 4C2MA 5B6CA 2GAEA 2JIMA 3HKZA 1AW8B 1QDNA 2VPZA 4KDIA 1TWCA 1CZ4A 3IR5A 4RV0A 2A6ED 1L8FA 3O5AA 1SIWA 3X2OA 3GTQA 1KQGA 2JIQA 1Y4ZA 1DMRA 4JCWA 3QQ8A 4GA6A 3SULA 1E32A 3PLXB 1Y1VA 1BW3A 5FTMA 1I3QA 1ZC1A 2C45A 1PYQA 1H0HA 4QIWA 1TWGA 1WC2A 1TWAA 1E18A 2E7ZA 2V45A 1KQFA 1R7RA 4AZDA 4L48A 3ML1A 3M3GA 4DMRA 5T5MD 1Y5IA 1YNND 5DYGA 3SUMA 2VUMA 5GLXA 1PYUB 4FERA 1EU1A 3IR6A 3GTGA 3GTKA 2E2HA 3GTMA 3IR7A 4D7ZB 1H5NA 2VPXA 2PMZA 3X2GA 1BW4A 1YLEA 2VPYA 3X2LA 1WLFA 2YU9A 4KO8A 1OA9A 2B63A 1PT0A 2NAPA 2O5JD 3X2PA 3X2KA 4NOHA 3CQZA 2G6GA 5GM9A 1UHEA 2ENGA 3X2IA 5FTNA 3X2HA 4CS0A 1IW7D 2PI8A 2IV2X 4ENGA 2R7ZA 1PQFA 2A69D 3GTJA 3X2JA 2JIOA 2PICA 3CZBA 2NVYA 5FTJA 5H4UA 1YNJD 5C1BA 1WCMA 4FFTA 4AAYA 2R92A 1ZYRD 3OUGA 1CZ5A 5C18A 1PQEA 1PT1A 3HU1A 1G8JA 3X2MA 2PJHB 2WB1A 4JJOA 3DMRA 4FG2A 3GTLA 2CW0D 3CF2A 2HCZX 1K83A 2PJJA 2YUJA 3ENGA 4ZM7A 5GLYA 1N10A 3TM7B 1UHDA 4FG4A 1PPYA 5DYIA 2R93A 4CRZA 4AONB 2JA5A 1QCSA 2JIRA 1HD5A 1G8KA 1E61A 2DMRA 2WAQA 1R9TA 1Q16A 4AYBA 1TMOA 1CR5A 3QQ7A 4KDLA 3TIWA 3QWZA 5T5ID 1E5VA 1OGYA 1FDIA 2NVXA 1E60A 1R27A 1TWHA 2KQAA 3HU3A 2Y0SA 1AA6A 2JA7A 2G5DA 1FDOA 4AOKB 2A68D 1DMSA 2JA6A 2JIPA 2E2IA 1VC3B 4KODA 2EEOB 3GTPA 2AE0X 3QC8A 3SUKA 2KI8A 3H0GA 2BE5D 1PQHA 2V3VA 5GLFA 3GTOA 4AVRA 1S3SA 2BH0A 3SUJA 4JP7A 4JP6A 3HU2A 1OA7A 4JS7A 3D30A 4GA5A 2PNWA 1TWFA 3FKIA 5FTKA 1SFOA 5FTLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PIC A;  4L48 A;  3M3G A;  3CZB A;  3X2N A;  3SUM A;  5H4U A;  5GLX A;  2KQA A;  4FER A;  4FFT A;  2GAE A;  2G5D A;  3X2J A;  3X2M A;  4JJO A;  4FG2 A;  3X2G A;  2AE0 X;  1BW4 A;  2HCZ X;  3SUK A;  1L8F A;  3X2L A;  2PJJ A;  3ENG A;  3X2O A;  4ZM7 A;  1OA9 A;  5GLY A;  1N10 A;  4AVR A;  2BH0 A;  4JCW A;  3SUJ A;  4FG4 A;  3X2K A;  4JP7 A;  4JP6 A;  3X2P A;  2G6G A;  1OA7 A;  5GM9 A;  3SUL A;  2ENG A;  3X2I A;  4JS7 A;  3X2H A;  1HD5 A;  3D30 A;  2PI8 A;  1BW3 A;  4ENG A;  2PNW A;  1WC2 A; 
#chains in the Genus database with same CATH topology
 4CRY G;  2NYA A;  1Y1W A;  3X2N A;  1SMY D;  2VPW A;  2A6H D;  4KLN A;  5EPP A;  1I50 A;  4H3S A;  4C2M A;  3W2V B;  5B6C A;  2ZJR S;  2GAE A;  2HZ7 A;  1B75 A;  2JIM A;  3HKZ A;  1AW8 B;  1QDN A;  1NXZ A;  2VPZ A;  5GAG W;  4KDI A;  3AII A;  1TWC A;  1CZ4 A;  3IR5 A;  4RV0 A;  2A6E D;  1L8F A;  3O5A A;  1SIW A;  3X2O A;  3GTQ A;  1KQG A;  2JIQ A;  1Y4Z A;  1DMR A;  5DM7 S;  3W2W B;  4JCW A;  3DLL S;  3QQ8 A;  4GA6 A;  1VHY A;  2Z0Y A;  3SUL A;  1GTR A;  1E32 A;  3PLX B;  1DFU P;  1Y1V A;  5FTM A;  1I3Q A;  1BW3 A;  1ZC1 A;  4J3C A;  1NYL A;  2C45 A;  1PYQ A;  1H0H A;  4QIW A;  1TWG A;  2E7Z A;  1WC2 A;  1E18 A;  1TWA A;  2V45 A;  1KQF A;  4E8B A;  1R7R A;  4WFB S;  4AZD A;  4L48 A;  3ML1 A;  3M3G A;  4DMR A;  5T5M D;  1O0C A;  1Y5I A;  1YNN D;  5DYG A;  3SUM A;  2VUM A;  4JXX A;  1PYU B;  5GLX A;  1EU1 A;  3IR6 A;  4FER A;  3GTG A;  3GTK A;  2E2H A;  4P2B A;  4JYZ A;  1EUY A;  2CX8 A;  3GTM A;  3IR7 A;  4D7Z B;  5HL7 S;  1H5N A;  2VPX A;  2PMZ A;  3X2G A;  1YLE A;  2VPY A;  1BW4 A;  1UDX A;  5GAE W;  1WLF A;  3X2L A;  2YU9 A;  4KO8 A;  1QRS A;  2RE8 A;  2RD2 A;  1OA9 A;  2B63 A;  1PT0 A;  2NAP A;  2O5J D;  3X2P A;  3X2K A;  4NOH A;  3CQZ A;  2G6G A;  1UHE A;  5GM9 A;  1EUQ A;  2ENG A;  5FTN A;  3X2I A;  3X2H A;  4JXZ A;  4CS0 A;  4IOC S;  1IW7 D;  2PI8 A;  2IV2 X;  4ENG A;  2R7Z A;  1PQF A;  1Z85 A;  3CF5 S;  1QRU A;  2A69 D;  5DM6 S;  1V6Z A;  3GTJ A;  2JIO A;  3X2J A;  3J7Z V;  3PIP S;  2ZJP S;  2PIC A;  3CZB A;  2NVY A;  3X1L B;  5FTJ A;  1YNJ D;  5H4U A;  5C1B A;  1WCM A;  4FFT A;  4AAY A;  2R92 A;  1O0B A;  1ZYR D;  3OUG A;  1CZ5 A;  5C18 A;  1PQE A;  1PT1 A;  4V19 4;  3HU1 A;  2NWA A;  1G8J A;  2PJH B;  2WB1 A;  3DMR A;  4JJO A;  3X2M A;  4FG2 A;  3GTL A;  2CW0 D;  3CF2 A;  1QRT A;  2HCZ X;  1K83 A;  2PJJ A;  2YUJ A;  3ENG A;  4ZM7 A;  4WFN S;  5GLY A;  2EGW A;  1N10 A;  3TM7 B;  1UHD A;  1FEU A;  4FG4 A;  4U67 S;  1PPY A;  5DYI A;  2R93 A;  4CRZ A;  4WCE S;  1GTS A;  4AON B;  2JA5 A;  4H4K A;  4L69 A;  1QCS A;  2JIR A;  1G8K A;  1HD5 A;  1ZJW A;  1E61 A;  2DMR A;  2WAQ A;  1R9T A;  1Q16 A;  4AYB A;  1TMO A;  1CR5 A;  3QQ7 A;  4KDL A;  3TIW A;  3QWZ A;  5T5I D;  1QTQ A;  1E5V A;  1OGY A;  2ZJQ S;  1FDI A;  2NVX A;  1E60 A;  3PIO S;  1R27 A;  1TWH A;  4IO9 S;  2KQA A;  3HU3 A;  2Y0S A;  1AA6 A;  4WF9 S;  2JA7 A;  1FDO A;  2G5D A;  4AOK B;  2A68 D;  1DMS A;  5IZN A;  2JA6 A;  2JIP A;  2E2I A;  1VC3 B;  4KOD A;  2EEO B;  3GTP A;  2AE0 X;  3QC8 A;  4WFA S;  3SUK A;  4UY8 8;  2KI8 A;  3H0G A;  2BE5 D;  1PQH A;  2V3V A;  5GLF A;  3KW2 A;  2EGV A;  3GTO A;  1S3S A;  4AVR A;  2BH0 A;  5GAD W;  3SUJ A;  4JP7 A;  4JP6 A;  3HU2 A;  1OA7 A;  5JVH S;  5BNZ A;  4IOA S;  1D6K A;  4JS7 A;  5GAH W;  3D30 A;  4GA5 A;  5JVG S;  1TWF A;  2PNW A;  3FKI A;  1VHK A;  5FTK A;  1SFO A;  1EXD A;  5FTL A; 
#chains in the Genus database with same CATH homology
 4CRY G;  2NYA A;  1Y1W A;  3X2N A;  1SMY D;  2VPW A;  2A6H D;  4KLN A;  5EPP A;  1I50 A;  4C2M A;  5B6C A;  2GAE A;  2JIM A;  3HKZ A;  1AW8 B;  1QDN A;  2VPZ A;  4KDI A;  1TWC A;  1CZ4 A;  3IR5 A;  4RV0 A;  2A6E D;  1L8F A;  3O5A A;  1SIW A;  3X2O A;  3GTQ A;  1KQG A;  2JIQ A;  1Y4Z A;  1DMR A;  4JCW A;  3QQ8 A;  4GA6 A;  3SUL A;  1E32 A;  3PLX B;  1Y1V A;  1BW3 A;  5FTM A;  1I3Q A;  1ZC1 A;  2C45 A;  1PYQ A;  1H0H A;  4QIW A;  1TWG A;  1WC2 A;  1TWA A;  1E18 A;  2E7Z A;  2V45 A;  1KQF A;  1R7R A;  4AZD A;  4L48 A;  3ML1 A;  3M3G A;  4DMR A;  5T5M D;  1Y5I A;  1YNN D;  5DYG A;  3SUM A;  2VUM A;  5GLX A;  1PYU B;  4FER A;  1EU1 A;  3IR6 A;  3GTG A;  3GTK A;  2E2H A;  3GTM A;  3IR7 A;  4D7Z B;  1H5N A;  2VPX A;  2PMZ A;  3X2G A;  1BW4 A;  1YLE A;  2VPY A;  3X2L A;  1WLF A;  2YU9 A;  4KO8 A;  1OA9 A;  2B63 A;  1PT0 A;  2NAP A;  2O5J D;  3X2P A;  3X2K A;  4NOH A;  3CQZ A;  2G6G A;  5GM9 A;  1UHE A;  2ENG A;  3X2I A;  5FTN A;  3X2H A;  4CS0 A;  1IW7 D;  2PI8 A;  2IV2 X;  4ENG A;  2R7Z A;  1PQF A;  2A69 D;  3GTJ A;  3X2J A;  2JIO A;  2PIC A;  3CZB A;  2NVY A;  5FTJ A;  5H4U A;  1YNJ D;  5C1B A;  1WCM A;  4FFT A;  4AAY A;  2R92 A;  1ZYR D;  3OUG A;  1CZ5 A;  5C18 A;  1PQE A;  1PT1 A;  3HU1 A;  1G8J A;  3X2M A;  2PJH B;  2WB1 A;  4JJO A;  3DMR A;  4FG2 A;  3GTL A;  2CW0 D;  3CF2 A;  2HCZ X;  1K83 A;  2PJJ A;  2YUJ A;  3ENG A;  4ZM7 A;  5GLY A;  1N10 A;  3TM7 B;  1UHD A;  4FG4 A;  1PPY A;  5DYI A;  2R93 A;  4CRZ A;  4AON B;  2JA5 A;  1QCS A;  2JIR A;  1HD5 A;  1G8K A;  1E61 A;  2DMR A;  2WAQ A;  1R9T A;  1Q16 A;  4AYB A;  1TMO A;  1CR5 A;  3QQ7 A;  4KDL A;  3TIW A;  3QWZ A;  5T5I D;  1E5V A;  1OGY A;  1FDI A;  2NVX A;  1E60 A;  1R27 A;  1TWH A;  2KQA A;  3HU3 A;  2Y0S A;  1AA6 A;  2JA7 A;  2G5D A;  1FDO A;  4AOK B;  2A68 D;  1DMS A;  2JA6 A;  2JIP A;  2E2I A;  1VC3 B;  4KOD A;  2EEO B;  3GTP A;  2AE0 X;  3QC8 A;  3SUK A;  2KI8 A;  3H0G A;  2BE5 D;  1PQH A;  2V3V A;  5GLF A;  3GTO A;  4AVR A;  1S3S A;  2BH0 A;  3SUJ A;  4JP7 A;  4JP6 A;  3HU2 A;  1OA7 A;  4JS7 A;  3D30 A;  4GA5 A;  2PNW A;  1TWF A;  3FKI A;  5FTK A;  1SFO A;  5FTL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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