2G6GA

Crystal structure of mlta from neisseria gonorrhoeae
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
410
structure length
405
Chain Sequence
PDTSVINGPDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
pubmed doi rcsb
source organism Neisseria gonorrhoeae fa 1090
molecule tags Hydrolase
molecule keywords GNA33
total genus 95
structure length 405
sequence length 410
ec nomenclature ec 3.2.1.-:
pdb deposition date 2006-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 2g6gA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 2g6gA02
2AE0X 3X2LA 4FG2A 4JP7A 4ZM7A 4JP6A 2PNWA 3D30A 3SUMA 1HD5A 3X2GA 3SULA 4L48A 5GLYA 2PJJA 4FFTA 1WC2A 3X2PA 4ENGA 2PICA 4JS7A 1OA7A 2HCZX 3X2JA 3X2HA 3SUKA 2GAEA 3X2NA 4AVRA 2KQAA 1BW4A 2ENGA 5H4UA 2G6GA 2PI8A 3ENGA 2G5DA 1OA9A 4FERA 4FG4A 5GM9A 1L8FA 3CZBA 4JCWA 3SUJA 3X2OA 2BH0A 1BW3A 3X2MA 5GLXA 3X2IA 3M3GA 4JJOA 1N10A 3X2KA
chains in the Genus database with same CATH superfamily
1IW7D 3QQ8A 3GTOA 1DMSA 2EEOB 3X1LB 5T5ID 5GAHW 4KO8A 3D30A 3SUMA 1O0CA 3HU2A 1PPYA 1E5VA 1CZ5A 5GLFA 4L48A 1YNJD 2PJJA 4FFTA 3X2PA 1VHYA 3PIPS 4KDIA 1AA6A 4JS7A 5JVHS 5GAEW 3TIWA 3HKZA 5DM6S 5T5MD 2E2IA 4AVRA 2B63A 4KLNA 1R9TA 2ZJPS 2E7ZA 2ENGA 1TWGA 4GA5A 4AONB 1UDXA 1PQFA 3KW2A 1TMOA 2NVYA 3SUJA 1DMRA 1OA9A 4FG4A 2YU9A 2RD2A 4UY88 1VC3B 1BW3A 1K83A 1TWAA 1WLFA 1FDOA 2A6HD 1I50A 5DYIA 2IV2X 1CR5A 2CX8A 2ZJRS 3X2KA 3GTGA 1YLEA 4WFNS 4JXZA 3GTJA 4AYBA 5EPPA 2R92A 4WF9S 3H0GA 3QQ7A 5FTMA 3QWZA 4D7ZB 1Y4ZA 1QDNA 1KQGA 2VUMA 1NXZA 1OGYA 1B75A 1AW8B 4IOAS 3CQZA 5FTJA 1CZ4A 2A68D 2JA5A 2PICA 4JYZA 5C18A 2HCZX 5FTKA 1TWHA 2R7ZA 3DMRA 4H3SA 1EUYA 1DFUP 4WFBS 1E18A 4L69A 2EGWA 1UHDA 3GTQA 4NOHA 1PQEA 4C2MA 1BW4A 1O0BA 1ZYRD 3ENGA 1Y1WA 2JIMA 2G5DA 4CRZA 3PIOS 2NVXA 1L8FA 2DMRA 2NYAA 4AZDA 4CS0A 5C1BA 2BH0A 2E2HA 1Z85A 3X2MA 3W2VB 1NYLA 1TWCA 3M3GA 2C45A 4JJOA 1Y1VA 1SIWA 1G8KA 4J3CA 4WCES 1YNND 2VPXA 4FG2A 1GTRA 1S3SA 4ZM7A 3QC8A 4RV0A 4IO9S 1QRUA 4WFAS 2V3VA 5BNZA 2VPZA 1D6KA 3ML1A 1ZJWA 1EXDA 1E60A 4U67S 2R93A 1HD5A 3CF2A 5GADW 3OUGA 2JIRA 1ZC1A 1G8JA 3FKIA 3X2JA 1OA7A 1GTSA 2V45A 3X2HA 2ZJQS 3SUKA 5B6CA 3IR5A 2BE5D 2GAEA 5GAGW 4CRYG 2RE8A 4V194 2PMZA 1FDIA 3TM7B 1QTQA 2JA7A 2G6GA 5JVGS 1E32A 2HZ7A 3CF5S 4FERA 5GM9A 1R7RA 3CZBA 1KQFA 4KDLA 3X2OA 1E61A 3GTMA 1Q16A 5GLXA 3J7ZV 1PYQA 1PQHA 2JIQA 3GTPA 1QCSA 4H4KA 2AE0X 3X2LA 2PJHB 2O5JD 1QRTA 4AAYA 5DM7S 1EU1A 2VPWA 4JP7A 1EUQA 4JP6A 2PNWA 4P2BA 1UHEA 5DYGA 1PT1A 1VHKA 2YUJA 3HU1A 5FTNA 4DMRA 3IR6A 1I3QA 3X2GA 2EGVA 2JA6A 3DLLS 1SMYD 4KODA 5GLYA 3SULA 3HU3A 2A69D 2A6ED 2WAQA 1PYUB 1WC2A 4GA6A 4ENGA 5HL7S 2NWAA 1TWFA 1WCMA 2NAPA 3O5AA 1H0HA 1PT0A 3X2NA 3GTKA 2JIPA 2KQAA 3IR7A 3W2WB 5H4UA 2WB1A 4QIWA 2Y0SA 2PI8A 2CW0D 2Z0YA 1Y5IA 4IOCS 1FEUA 2JIOA 2VPYA 4JXXA 4JCWA 3AIIA 1SFOA 1QRSA 3X2IA 4E8BA 2KI8A 4AOKB 1H5NA 1R27A 5IZNA 3GTLA 1N10A 1V6ZA 3PLXB 5FTLA
chains in the Genus database with same CATH topology
1IW7D 3QQ8A 3GTOA 1DMSA 2EEOB 5T5ID 4KO8A 3D30A 3SUMA 3HU2A 1PPYA 1E5VA 1CZ5A 5GLFA 4L48A 1YNJD 2PJJA 4FFTA 3X2PA 4KDIA 1AA6A 4JS7A 3TIWA 3HKZA 5T5MD 2E2IA 4AVRA 2B63A 4KLNA 1R9TA 2E7ZA 2ENGA 1TWGA 4GA5A 4AONB 1PQFA 1TMOA 2NVYA 3SUJA 1OA9A 1DMRA 4FG4A 2YU9A 1VC3B 1BW3A 1K83A 1TWAA 1WLFA 1FDOA 2A6HD 1I50A 5DYIA 2IV2X 1CR5A 3X2KA 3GTGA 1YLEA 3GTJA 4AYBA 5EPPA 2R92A 3H0GA 3QQ7A 5FTMA 3QWZA 4D7ZB 1Y4ZA 1QDNA 1KQGA 2VUMA 1OGYA 1AW8B 3CQZA 5FTJA 1CZ4A 2A68D 2JA5A 2PICA 5C18A 2HCZX 5FTKA 1TWHA 2R7ZA 3DMRA 1E18A 1BW4A 1UHDA 4NOHA 1PQEA 4C2MA 3GTQA 1ZYRD 3ENGA 1Y1WA 2JIMA 2G5DA 4CRZA 2NVXA 1L8FA 2DMRA 2NYAA 4AZDA 4CS0A 5C1BA 2BH0A 2E2HA 3X2MA 1TWCA 3M3GA 2C45A 4JJOA 1Y1VA 1SIWA 1G8KA 1YNND 2VPXA 4FG2A 1S3SA 4ZM7A 3QC8A 4RV0A 2V3VA 2VPZA 3ML1A 1E60A 2R93A 1HD5A 3CF2A 3OUGA 2JIRA 1ZC1A 1G8JA 3FKIA 3X2JA 1OA7A 2V45A 3X2HA 3SUKA 5B6CA 3IR5A 2BE5D 2GAEA 4CRYG 2PMZA 1FDIA 3TM7B 2JA7A 2G6GA 1E32A 4FERA 5GM9A 1R7RA 3CZBA 1KQFA 3X2OA 4KDLA 1E61A 3GTMA 1Q16A 5GLXA 1PYQA 1PQHA 2JIQA 3GTPA 1QCSA 2AE0X 3X2LA 2PJHB 2O5JD 4AAYA 4JP7A 1EU1A 2VPWA 4JP6A 2PNWA 1UHEA 5DYGA 1PT1A 2YUJA 3HU1A 5FTNA 4DMRA 3IR6A 1I3QA 3X2GA 2JA6A 3SULA 5GLYA 1SMYD 4KODA 3HU3A 2A69D 2A6ED 2WAQA 1PYUB 1WC2A 4ENGA 4GA6A 1TWFA 1WCMA 2NAPA 3O5AA 1H0HA 3X2NA 1PT0A 3GTKA 2JIPA 2KQAA 3IR7A 5H4UA 2WB1A 4QIWA 2Y0SA 2PI8A 2CW0D 1Y5IA 2JIOA 2VPYA 4JCWA 1SFOA 3X2IA 2KI8A 4AOKB 1H5NA 1R27A 3GTLA 1N10A 3PLXB 5FTLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AE0 X;  3X2L A;  4FG2 A;  4JP7 A;  4ZM7 A;  4JP6 A;  2PNW A;  3D30 A;  3SUM A;  1HD5 A;  3X2G A;  3SUL A;  4L48 A;  5GLY A;  2PJJ A;  4FFT A;  1WC2 A;  3X2P A;  4ENG A;  2PIC A;  4JS7 A;  1OA7 A;  2HCZ X;  3X2J A;  3X2H A;  3SUK A;  2GAE A;  3X2N A;  4AVR A;  2KQA A;  1BW4 A;  2ENG A;  5H4U A;  2G6G A;  2PI8 A;  3ENG A;  2G5D A;  1OA9 A;  4FER A;  4FG4 A;  5GM9 A;  1L8F A;  3CZB A;  4JCW A;  3SUJ A;  3X2O A;  2BH0 A;  1BW3 A;  3X2M A;  5GLX A;  3X2I A;  3M3G A;  4JJO A;  1N10 A;  3X2K A; 
#chains in the Genus database with same CATH topology
 1IW7 D;  3QQ8 A;  3GTO A;  1DMS A;  2EEO B;  3X1L B;  5T5I D;  5GAH W;  4KO8 A;  3D30 A;  3SUM A;  1O0C A;  3HU2 A;  1PPY A;  1E5V A;  1CZ5 A;  5GLF A;  4L48 A;  1YNJ D;  2PJJ A;  4FFT A;  3X2P A;  1VHY A;  3PIP S;  4KDI A;  1AA6 A;  4JS7 A;  5JVH S;  5GAE W;  3TIW A;  3HKZ A;  5DM6 S;  5T5M D;  2E2I A;  4AVR A;  2B63 A;  4KLN A;  1R9T A;  2ZJP S;  2E7Z A;  2ENG A;  1TWG A;  4GA5 A;  4AON B;  1UDX A;  1PQF A;  3KW2 A;  1TMO A;  2NVY A;  3SUJ A;  1DMR A;  1OA9 A;  4FG4 A;  2YU9 A;  2RD2 A;  4UY8 8;  1VC3 B;  1BW3 A;  1K83 A;  1TWA A;  1WLF A;  1FDO A;  2A6H D;  1I50 A;  5DYI A;  2IV2 X;  1CR5 A;  2CX8 A;  2ZJR S;  3X2K A;  3GTG A;  1YLE A;  4WFN S;  4JXZ A;  3GTJ A;  4AYB A;  5EPP A;  2R92 A;  4WF9 S;  3H0G A;  3QQ7 A;  5FTM A;  3QWZ A;  4D7Z B;  1Y4Z A;  1QDN A;  1KQG A;  2VUM A;  1NXZ A;  1OGY A;  1B75 A;  1AW8 B;  4IOA S;  3CQZ A;  5FTJ A;  1CZ4 A;  2A68 D;  2JA5 A;  2PIC A;  4JYZ A;  5C18 A;  2HCZ X;  5FTK A;  1TWH A;  2R7Z A;  3DMR A;  4H3S A;  1EUY A;  1DFU P;  4WFB S;  1E18 A;  4L69 A;  2EGW A;  1UHD A;  3GTQ A;  4NOH A;  1PQE A;  4C2M A;  1BW4 A;  1O0B A;  1ZYR D;  3ENG A;  1Y1W A;  2JIM A;  2G5D A;  4CRZ A;  3PIO S;  2NVX A;  1L8F A;  2DMR A;  2NYA A;  4AZD A;  4CS0 A;  5C1B A;  2BH0 A;  2E2H A;  1Z85 A;  3X2M A;  3W2V B;  1NYL A;  1TWC A;  3M3G A;  2C45 A;  4JJO A;  1Y1V A;  1SIW A;  1G8K A;  4J3C A;  4WCE S;  1YNN D;  2VPX A;  4FG2 A;  1GTR A;  1S3S A;  4ZM7 A;  3QC8 A;  4RV0 A;  4IO9 S;  1QRU A;  4WFA S;  2V3V A;  5BNZ A;  2VPZ A;  1D6K A;  3ML1 A;  1ZJW A;  1EXD A;  1E60 A;  4U67 S;  2R93 A;  1HD5 A;  3CF2 A;  5GAD W;  3OUG A;  2JIR A;  1ZC1 A;  1G8J A;  3FKI A;  3X2J A;  1OA7 A;  1GTS A;  2V45 A;  3X2H A;  2ZJQ S;  3SUK A;  5B6C A;  3IR5 A;  2BE5 D;  2GAE A;  5GAG W;  4CRY G;  2RE8 A;  4V19 4;  2PMZ A;  1FDI A;  3TM7 B;  1QTQ A;  2JA7 A;  2G6G A;  5JVG S;  1E32 A;  2HZ7 A;  3CF5 S;  4FER A;  5GM9 A;  1R7R A;  3CZB A;  1KQF A;  4KDL A;  3X2O A;  1E61 A;  3GTM A;  1Q16 A;  5GLX A;  3J7Z V;  1PYQ A;  1PQH A;  2JIQ A;  3GTP A;  1QCS A;  4H4K A;  2AE0 X;  3X2L A;  2PJH B;  2O5J D;  1QRT A;  4AAY A;  5DM7 S;  1EU1 A;  2VPW A;  4JP7 A;  1EUQ A;  4JP6 A;  2PNW A;  4P2B A;  1UHE A;  5DYG A;  1PT1 A;  1VHK A;  2YUJ A;  3HU1 A;  5FTN A;  4DMR A;  3IR6 A;  1I3Q A;  3X2G A;  2EGV A;  2JA6 A;  3DLL S;  1SMY D;  4KOD A;  5GLY A;  3SUL A;  3HU3 A;  2A69 D;  2A6E D;  2WAQ A;  1PYU B;  1WC2 A;  4GA6 A;  4ENG A;  5HL7 S;  2NWA A;  1TWF A;  1WCM A;  2NAP A;  3O5A A;  1H0H A;  1PT0 A;  3X2N A;  3GTK A;  2JIP A;  2KQA A;  3IR7 A;  3W2W B;  5H4U A;  2WB1 A;  4QIW A;  2Y0S A;  2PI8 A;  2CW0 D;  2Z0Y A;  1Y5I A;  4IOC S;  1FEU A;  2JIO A;  2VPY A;  4JXX A;  4JCW A;  3AII A;  1SFO A;  1QRS A;  3X2I A;  4E8B A;  2KI8 A;  4AOK B;  1H5N A;  1R27 A;  5IZN A;  3GTL A;  1N10 A;  1V6Z A;  3PLX B;  5FTL A; 
#chains in the Genus database with same CATH homology
 1IW7 D;  3QQ8 A;  3GTO A;  1DMS A;  2EEO B;  5T5I D;  4KO8 A;  3D30 A;  3SUM A;  3HU2 A;  1PPY A;  1E5V A;  1CZ5 A;  5GLF A;  4L48 A;  1YNJ D;  2PJJ A;  4FFT A;  3X2P A;  4KDI A;  1AA6 A;  4JS7 A;  3TIW A;  3HKZ A;  5T5M D;  2E2I A;  4AVR A;  2B63 A;  4KLN A;  1R9T A;  2E7Z A;  2ENG A;  1TWG A;  4GA5 A;  4AON B;  1PQF A;  1TMO A;  2NVY A;  3SUJ A;  1OA9 A;  1DMR A;  4FG4 A;  2YU9 A;  1VC3 B;  1BW3 A;  1K83 A;  1TWA A;  1WLF A;  1FDO A;  2A6H D;  1I50 A;  5DYI A;  2IV2 X;  1CR5 A;  3X2K A;  3GTG A;  1YLE A;  3GTJ A;  4AYB A;  5EPP A;  2R92 A;  3H0G A;  3QQ7 A;  5FTM A;  3QWZ A;  4D7Z B;  1Y4Z A;  1QDN A;  1KQG A;  2VUM A;  1OGY A;  1AW8 B;  3CQZ A;  5FTJ A;  1CZ4 A;  2A68 D;  2JA5 A;  2PIC A;  5C18 A;  2HCZ X;  5FTK A;  1TWH A;  2R7Z A;  3DMR A;  1E18 A;  1BW4 A;  1UHD A;  4NOH A;  1PQE A;  4C2M A;  3GTQ A;  1ZYR D;  3ENG A;  1Y1W A;  2JIM A;  2G5D A;  4CRZ A;  2NVX A;  1L8F A;  2DMR A;  2NYA A;  4AZD A;  4CS0 A;  5C1B A;  2BH0 A;  2E2H A;  3X2M A;  1TWC A;  3M3G A;  2C45 A;  4JJO A;  1Y1V A;  1SIW A;  1G8K A;  1YNN D;  2VPX A;  4FG2 A;  1S3S A;  4ZM7 A;  3QC8 A;  4RV0 A;  2V3V A;  2VPZ A;  3ML1 A;  1E60 A;  2R93 A;  1HD5 A;  3CF2 A;  3OUG A;  2JIR A;  1ZC1 A;  1G8J A;  3FKI A;  3X2J A;  1OA7 A;  2V45 A;  3X2H A;  3SUK A;  5B6C A;  3IR5 A;  2BE5 D;  2GAE A;  4CRY G;  2PMZ A;  1FDI A;  3TM7 B;  2JA7 A;  2G6G A;  1E32 A;  4FER A;  5GM9 A;  1R7R A;  3CZB A;  1KQF A;  3X2O A;  4KDL A;  1E61 A;  3GTM A;  1Q16 A;  5GLX A;  1PYQ A;  1PQH A;  2JIQ A;  3GTP A;  1QCS A;  2AE0 X;  3X2L A;  2PJH B;  2O5J D;  4AAY A;  4JP7 A;  1EU1 A;  2VPW A;  4JP6 A;  2PNW A;  1UHE A;  5DYG A;  1PT1 A;  2YUJ A;  3HU1 A;  5FTN A;  4DMR A;  3IR6 A;  1I3Q A;  3X2G A;  2JA6 A;  3SUL A;  5GLY A;  1SMY D;  4KOD A;  3HU3 A;  2A69 D;  2A6E D;  2WAQ A;  1PYU B;  1WC2 A;  4ENG A;  4GA6 A;  1TWF A;  1WCM A;  2NAP A;  3O5A A;  1H0H A;  3X2N A;  1PT0 A;  3GTK A;  2JIP A;  2KQA A;  3IR7 A;  5H4U A;  2WB1 A;  4QIW A;  2Y0S A;  2PI8 A;  2CW0 D;  1Y5I A;  2JIO A;  2VPY A;  4JCW A;  1SFO A;  3X2I A;  2KI8 A;  4AOK B;  1H5N A;  1R27 A;  3GTL A;  1N10 A;  3PLX B;  5FTL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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