3X2GA

X-ray structure of pccel45a n92d apo form at 100k
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
total genus 49
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2gA00
2GAEA 2PI8A 2PICA 4FERA 4JP6A 3SULA 3SUJA 3X2IA 4ZM7A 4FFTA 3ENGA 2KQAA 5GLYA 3SUMA 4L48A 4FG2A 4JS7A 4JCWA 1BW3A 4AVRA 3X2KA 3X2GA 3X2OA 3X2JA 1N10A 1WC2A 2PJJA 3D30A 1HD5A 4JP7A 1BW4A 1OA7A 2BH0A 5H4UA 3X2MA 5GM9A 2ENGA 2G5DA 3M3GA 4JJOA 1OA9A 3X2PA 4ENGA 4FG4A 3X2HA 2AE0X 5GLXA 1L8FA 3CZBA 3X2LA 2G6GA 3X2NA 2HCZX 2PNWA 3SUKA
chains in the Genus database with same CATH superfamily
2Y0SA 1E18A 1DMSA 1WLFA 4CRZA 1SIWA 4FERA 1CZ5A 2JIPA 3ML1A 4ZM7A 1H5NA 3QQ8A 5GLYA 1CZ4A 4D7ZB 4FG2A 2JA5A 1TWGA 3GTJA 1YLEA 2VPYA 1Y4ZA 4AOKB 3FKIA 3X2KA 5DYGA 4AVRA 1R27A 4DMRA 1R9TA 1N10A 5FTMA 5T5MD 2NYAA 2WAQA 2BH0A 1E5VA 1TWAA 2NVYA 5GM9A 2ENGA 1AA6A 2A6ED 1FDIA 1H0HA 1OA9A 2V45A 1UHDA 4KLNA 2AE0X 4NOHA 1PQHA 1PYQA 3CZBA 3X2LA 2JA6A 2G6GA 1Q16A 3GTMA 4KODA 1S3SA 3GTGA 3HU1A 4AYBA 1I3QA 2GAEA 1G8KA 2PICA 2PI8A 3O5AA 2YUJA 1AW8B 4RV0A 4AAYA 4CRYG 3HU3A 3ENGA 1TWHA 4JS7A 4C2MA 4JCWA 3X2GA 1QDNA 1TWCA 3HU2A 1I50A 3IR6A 5C1BA 2PJJA 3D30A 1HD5A 3PLXB 2E2HA 5H4UA 1SMYD 4KO8A 2JA7A 2E7ZA 1Y5IA 2JIOA 2G5DA 3CQZA 5C18A 1Y1WA 3DMRA 1OGYA 4FG4A 3X2HA 4KDIA 1PPYA 3QWZA 2PNWA 3QQ7A 2JIRA 2R93A 4GA5A 3GTPA 1E60A 1IW7D 3SULA 4JP6A 3SUJA 2YU9A 2JIMA 3IR5A 2C45A 4FFTA 2E2IA 2KQAA 2IV2X 2VPXA 1TWFA 2CW0D 1PT1A 1QCSA 4L48A 5DYIA 2PJHB 1DMRA 2O5JD 3X2OA 2JIQA 1TMOA 1ZC1A 4GA6A 4JP7A 1BW4A 1OA7A 3HKZA 2VUMA 5T5ID 1KQGA 3CF2A 1PQEA 3TM7B 2VPZA 3X2PA 5FTJA 4ENGA 1PT0A 4CS0A 3TIWA 2NVXA 2V3VA 1SFOA 2HCZX 2A6HD 3SUKA 4KDLA 1VC3B 5FTKA 2KI8A 3IR7A 1PYUB 2BE5D 1YNJD 1FDOA 3X2IA 1ZYRD 4QIWA 4AZDA 2A69D 2NAPA 3OUGA 2EEOB 5B6CA 1G8JA 2WB1A 3QC8A 3SUMA 5FTLA 1R7RA 1YNND 1E61A 1BW3A 3X2JA 5FTNA 1CR5A 1KQFA 2A68D 1WC2A 2PMZA 2R7ZA 2B63A 1Y1VA 4AONB 3GTQA 1PQFA 2VPWA 3X2MA 1WCMA 1EU1A 1K83A 4JJOA 3M3GA 5EPPA 3GTLA 3GTKA 2R92A 5GLFA 3GTOA 5GLXA 1L8FA 3X2NA 2DMRA 1UHEA 3H0GA 1E32A
chains in the Genus database with same CATH topology
2GAEA 2PI8A 2PICA 4FERA 4JP6A 3SULA 3SUJA 3X2IA 4ZM7A 4FFTA 3ENGA 2KQAA 5GLYA 3SUMA 4L48A 4FG2A 4JS7A 4JCWA 1BW3A 4AVRA 3X2KA 3X2GA 3X2OA 3X2JA 1N10A 1WC2A 2PJJA 3D30A 1HD5A 4JP7A 1BW4A 1OA7A 2BH0A 5H4UA 3X2MA 5GM9A 2ENGA 2G5DA 3M3GA 4JJOA 1OA9A 3X2PA 4ENGA 4FG4A 3X2HA 2AE0X 5GLXA 1L8FA 3CZBA 3X2LA 2G6GA 3X2NA 2HCZX 2PNWA 3SUKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GAE A;  2PI8 A;  2PIC A;  4FER A;  4JP6 A;  3SUL A;  3SUJ A;  3X2I A;  4ZM7 A;  4FFT A;  3ENG A;  2KQA A;  5GLY A;  3SUM A;  4L48 A;  4FG2 A;  4JS7 A;  4JCW A;  1BW3 A;  4AVR A;  3X2K A;  3X2G A;  3X2O A;  3X2J A;  1N10 A;  1WC2 A;  2PJJ A;  3D30 A;  1HD5 A;  4JP7 A;  1BW4 A;  1OA7 A;  2BH0 A;  5H4U A;  3X2M A;  5GM9 A;  2ENG A;  2G5D A;  3M3G A;  4JJO A;  1OA9 A;  3X2P A;  4ENG A;  4FG4 A;  3X2H A;  2AE0 X;  5GLX A;  1L8F A;  3CZB A;  3X2L A;  2G6G A;  3X2N A;  2HCZ X;  2PNW A;  3SUK A; 
#chains in the Genus database with same CATH topology
 2Y0S A;  1E18 A;  1DMS A;  1WLF A;  4CRZ A;  1SIW A;  4FER A;  1CZ5 A;  2JIP A;  3ML1 A;  4ZM7 A;  1H5N A;  3QQ8 A;  5GLY A;  1CZ4 A;  4D7Z B;  4FG2 A;  2JA5 A;  1TWG A;  3GTJ A;  1YLE A;  2VPY A;  1Y4Z A;  4AOK B;  3FKI A;  3X2K A;  5DYG A;  4AVR A;  1R27 A;  4DMR A;  1R9T A;  1N10 A;  5FTM A;  5T5M D;  2NYA A;  2WAQ A;  2BH0 A;  1E5V A;  1TWA A;  2NVY A;  5GM9 A;  2ENG A;  1AA6 A;  2A6E D;  1FDI A;  1H0H A;  1OA9 A;  2V45 A;  1UHD A;  4KLN A;  2AE0 X;  4NOH A;  1PQH A;  1PYQ A;  3CZB A;  3X2L A;  2JA6 A;  2G6G A;  1Q16 A;  3GTM A;  4KOD A;  1S3S A;  3GTG A;  3HU1 A;  4AYB A;  1I3Q A;  2GAE A;  1G8K A;  2PIC A;  2PI8 A;  3O5A A;  2YUJ A;  1AW8 B;  4RV0 A;  4AAY A;  4CRY G;  3HU3 A;  3ENG A;  1TWH A;  4JS7 A;  4C2M A;  4JCW A;  3X2G A;  1QDN A;  1TWC A;  3HU2 A;  1I50 A;  3IR6 A;  5C1B A;  2PJJ A;  3D30 A;  1HD5 A;  3PLX B;  2E2H A;  5H4U A;  1SMY D;  4KO8 A;  2JA7 A;  2E7Z A;  1Y5I A;  2JIO A;  2G5D A;  3CQZ A;  5C18 A;  1Y1W A;  3DMR A;  1OGY A;  4FG4 A;  3X2H A;  4KDI A;  1PPY A;  3QWZ A;  2PNW A;  3QQ7 A;  2JIR A;  2R93 A;  4GA5 A;  3GTP A;  1E60 A;  1IW7 D;  3SUL A;  4JP6 A;  3SUJ A;  2YU9 A;  2JIM A;  3IR5 A;  2C45 A;  4FFT A;  2E2I A;  2KQA A;  2IV2 X;  2VPX A;  1TWF A;  2CW0 D;  1PT1 A;  1QCS A;  4L48 A;  5DYI A;  2PJH B;  1DMR A;  2O5J D;  3X2O A;  2JIQ A;  1TMO A;  1ZC1 A;  4GA6 A;  4JP7 A;  1BW4 A;  1OA7 A;  3HKZ A;  2VUM A;  5T5I D;  1KQG A;  3CF2 A;  1PQE A;  3TM7 B;  2VPZ A;  3X2P A;  5FTJ A;  4ENG A;  1PT0 A;  4CS0 A;  3TIW A;  2NVX A;  2V3V A;  1SFO A;  2HCZ X;  2A6H D;  3SUK A;  4KDL A;  1VC3 B;  5FTK A;  2KI8 A;  3IR7 A;  1PYU B;  2BE5 D;  1YNJ D;  1FDO A;  3X2I A;  1ZYR D;  4QIW A;  4AZD A;  2A69 D;  2NAP A;  3OUG A;  2EEO B;  5B6C A;  1G8J A;  2WB1 A;  3QC8 A;  3SUM A;  5FTL A;  1R7R A;  1YNN D;  1E61 A;  1BW3 A;  3X2J A;  5FTN A;  1CR5 A;  1KQF A;  2A68 D;  1WC2 A;  2PMZ A;  2R7Z A;  2B63 A;  1Y1V A;  4AON B;  3GTQ A;  1PQF A;  2VPW A;  3X2M A;  1WCM A;  1EU1 A;  1K83 A;  4JJO A;  3M3G A;  5EPP A;  3GTL A;  3GTK A;  2R92 A;  5GLF A;  3GTO A;  5GLX A;  1L8F A;  3X2N A;  2DMR A;  1UHE A;  3H0G A;  1E32 A; 
#chains in the Genus database with same CATH homology
 2GAE A;  2PI8 A;  2PIC A;  4FER A;  4JP6 A;  3SUL A;  3SUJ A;  3X2I A;  4ZM7 A;  4FFT A;  3ENG A;  2KQA A;  5GLY A;  3SUM A;  4L48 A;  4FG2 A;  4JS7 A;  4JCW A;  1BW3 A;  4AVR A;  3X2K A;  3X2G A;  3X2O A;  3X2J A;  1N10 A;  1WC2 A;  2PJJ A;  3D30 A;  1HD5 A;  4JP7 A;  1BW4 A;  1OA7 A;  2BH0 A;  5H4U A;  3X2M A;  5GM9 A;  2ENG A;  2G5D A;  3M3G A;  4JJO A;  1OA9 A;  3X2P A;  4ENG A;  4FG4 A;  3X2H A;  2AE0 X;  5GLX A;  1L8F A;  3CZB A;  3X2L A;  2G6G A;  3X2N A;  2HCZ X;  2PNW A;  3SUK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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