3X2GA

X-ray structure of pccel45a n92d apo form at 100k
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 49
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2gA00
4JJOA 2GAEA 2PI8A 3X2PA 1OA7A 1OA9A 4FFTA 2PNWA 4L48A 3X2OA 4ZM7A 2G5DA 3X2NA 2PJJA 3X2IA 4JP7A 4ENGA 3ENGA 1BW3A 5GM9A 2AE0X 1L8FA 1BW4A 4FG4A 3SUMA 3X2JA 1N10A 2G6GA 5GLXA 3X2LA 3X2MA 4JCWA 5GLYA 5H4UA 1HD5A 3SULA 3CZBA 4FG2A 4JP6A 4FERA 3X2GA 2PICA 2ENGA 1WC2A 2KQAA 2BH0A 3SUKA 4AVRA 3D30A 4JS7A 3X2KA 3SUJA 2HCZX 3M3GA 3X2HA
chains in the Genus database with same CATH superfamily
4JJOA 4GA5A 1G8KA 2NAPA 1E61A 5DYGA 2PI8A 3PLXB 2EEOB 2PNWA 4QIWA 1Y1VA 3X2OA 2O5JD 2B63A 1H0HA 3X2NA 1R7RA 3ENGA 1R9TA 2JIPA 1BW3A 1K83A 5GM9A 2VPYA 1PQEA 1PYQA 3GTPA 3X2JA 1CZ4A 3X2MA 5T5ID 5FTJA 4AYBA 4CRZA 2PJHB 1SFOA 1E60A 2VUMA 5H4UA 4C2MA 3GTQA 3TM7B 2JIMA 2JIOA 2BE5D 4KDIA 4KLNA 4AOKB 2KQAA 3GTGA 3SUJA 1WLFA 3X2HA 5EPPA 1TWCA 1R27A 1E18A 1VC3B 1DMSA 2WB1A 5FTMA 3QQ8A 1SMYD 1EU1A 3OUGA 4JP7A 4KDLA 4KO8A 3X2IA 4ENGA 3HU1A 2Y0SA 2JA7A 1ZYRD 1AW8B 3IR5A 1YLEA 2AE0X 1I50A 3SUMA 1TWFA 2IV2X 2R92A 1G8JA 2G6GA 2KI8A 3HKZA 2VPXA 5GLXA 1QCSA 3X2LA 2JA5A 1HD5A 3CZBA 1UHDA 4FG2A 1Q16A 5FTLA 1QDNA 3X2GA 4AONB 2PICA 3QQ7A 2C45A 1WC2A 1OGYA 3SUKA 1AA6A 4AVRA 1KQFA 5FTNA 5GLFA 2VPZA 2YU9A 2GAEA 1CZ5A 3CF2A 1KQGA 3GTOA 2JA6A 2PMZA 4FFTA 4GA6A 1SIWA 4L48A 4CRYG 2V45A 2PJJA 2V3VA 1Y4ZA 3FKIA 1E5VA 1UHEA 1L8FA 2CW0D 4FG4A 4CS0A 2A6HD 1Y5IA 1N10A 3GTKA 1PT1A 2NYAA 4JCWA 2NVYA 5GLYA 5T5MD 2NVXA 2A68D 1H5NA 1PPYA 3QC8A 3GTLA 1TWAA 3QWZA 2JIRA 3GTJA 5B6CA 2E2IA 3IR6A 3D30A 4JS7A 3X2KA 4D7ZB 2HCZX 1FDOA 3M3GA 3ML1A 1Y1WA 1PT0A 1TWHA 2E7ZA 1I3QA 3HU3A 1OA7A 1OA9A 3DMRA 3X2PA 5C18A 2A69D 4ZM7A 2G5DA 1TMOA 5C1BA 3CQZA 2R7ZA 4NOHA 3TIWA 2VPWA 1BW4A 1TWGA 5FTKA 1ZC1A 3HU2A 2R93A 5DYIA 4DMRA 4RV0A 1IW7D 4AZDA 3IR7A 2JIQA 1FDIA 1CR5A 1PYUB 4JP6A 4KODA 1PQHA 4FERA 1YNJD 3SULA 1YNND 2A6ED 1PQFA 4AAYA 2YUJA 1DMRA 2DMRA 1S3SA 2ENGA 2BH0A 1E32A 3H0GA 2WAQA 1WCMA 3O5AA 3GTMA 2E2HA
chains in the Genus database with same CATH topology
4JJOA 2GAEA 2PI8A 3X2PA 1OA7A 1OA9A 4FFTA 2PNWA 4L48A 3X2OA 4ZM7A 2G5DA 3X2NA 2PJJA 3X2IA 4JP7A 4ENGA 3ENGA 1BW3A 5GM9A 2AE0X 1L8FA 1BW4A 4FG4A 3SUMA 3X2JA 1N10A 2G6GA 5GLXA 3X2LA 3X2MA 4JCWA 5GLYA 5H4UA 1HD5A 3SULA 3CZBA 4FG2A 4JP6A 4FERA 3X2GA 2PICA 2ENGA 1WC2A 2KQAA 2BH0A 3SUKA 4AVRA 3D30A 4JS7A 3X2KA 3SUJA 2HCZX 3M3GA 3X2HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JJO A;  2GAE A;  2PI8 A;  3X2P A;  1OA7 A;  1OA9 A;  4FFT A;  2PNW A;  4L48 A;  3X2O A;  4ZM7 A;  2G5D A;  3X2N A;  2PJJ A;  3X2I A;  4JP7 A;  4ENG A;  3ENG A;  1BW3 A;  5GM9 A;  2AE0 X;  1L8F A;  1BW4 A;  4FG4 A;  3SUM A;  3X2J A;  1N10 A;  2G6G A;  5GLX A;  3X2L A;  3X2M A;  4JCW A;  5GLY A;  5H4U A;  1HD5 A;  3SUL A;  3CZB A;  4FG2 A;  4JP6 A;  4FER A;  3X2G A;  2PIC A;  2ENG A;  1WC2 A;  2KQA A;  2BH0 A;  3SUK A;  4AVR A;  3D30 A;  4JS7 A;  3X2K A;  3SUJ A;  2HCZ X;  3M3G A;  3X2H A; 
#chains in the Genus database with same CATH topology
 4JJO A;  4GA5 A;  1G8K A;  2NAP A;  1E61 A;  5DYG A;  2PI8 A;  3PLX B;  2EEO B;  2PNW A;  4QIW A;  1Y1V A;  3X2O A;  2O5J D;  2B63 A;  1H0H A;  3X2N A;  1R7R A;  3ENG A;  1R9T A;  2JIP A;  1BW3 A;  1K83 A;  5GM9 A;  2VPY A;  1PQE A;  1PYQ A;  3GTP A;  3X2J A;  1CZ4 A;  3X2M A;  5T5I D;  5FTJ A;  4AYB A;  4CRZ A;  2PJH B;  1SFO A;  1E60 A;  2VUM A;  5H4U A;  4C2M A;  3GTQ A;  3TM7 B;  2JIM A;  2JIO A;  2BE5 D;  4KDI A;  4KLN A;  4AOK B;  2KQA A;  3GTG A;  3SUJ A;  1WLF A;  3X2H A;  5EPP A;  1TWC A;  1R27 A;  1E18 A;  1VC3 B;  1DMS A;  2WB1 A;  5FTM A;  3QQ8 A;  1SMY D;  1EU1 A;  3OUG A;  4JP7 A;  4KDL A;  4KO8 A;  3X2I A;  4ENG A;  3HU1 A;  2Y0S A;  2JA7 A;  1ZYR D;  1AW8 B;  3IR5 A;  1YLE A;  2AE0 X;  1I50 A;  3SUM A;  1TWF A;  2IV2 X;  2R92 A;  1G8J A;  2G6G A;  2KI8 A;  3HKZ A;  2VPX A;  5GLX A;  1QCS A;  3X2L A;  2JA5 A;  1HD5 A;  3CZB A;  1UHD A;  4FG2 A;  1Q16 A;  5FTL A;  1QDN A;  3X2G A;  4AON B;  2PIC A;  3QQ7 A;  2C45 A;  1WC2 A;  1OGY A;  3SUK A;  1AA6 A;  4AVR A;  1KQF A;  5FTN A;  5GLF A;  2VPZ A;  2YU9 A;  2GAE A;  1CZ5 A;  3CF2 A;  1KQG A;  3GTO A;  2JA6 A;  2PMZ A;  4FFT A;  4GA6 A;  1SIW A;  4L48 A;  4CRY G;  2V45 A;  2PJJ A;  2V3V A;  1Y4Z A;  3FKI A;  1E5V A;  1UHE A;  1L8F A;  2CW0 D;  4FG4 A;  4CS0 A;  2A6H D;  1Y5I A;  1N10 A;  3GTK A;  1PT1 A;  2NYA A;  4JCW A;  2NVY A;  5GLY A;  5T5M D;  2NVX A;  2A68 D;  1H5N A;  1PPY A;  3QC8 A;  3GTL A;  1TWA A;  3QWZ A;  2JIR A;  3GTJ A;  5B6C A;  2E2I A;  3IR6 A;  3D30 A;  4JS7 A;  3X2K A;  4D7Z B;  2HCZ X;  1FDO A;  3M3G A;  3ML1 A;  1Y1W A;  1PT0 A;  1TWH A;  2E7Z A;  1I3Q A;  3HU3 A;  1OA7 A;  1OA9 A;  3DMR A;  3X2P A;  5C18 A;  2A69 D;  4ZM7 A;  2G5D A;  1TMO A;  5C1B A;  3CQZ A;  2R7Z A;  4NOH A;  3TIW A;  2VPW A;  1BW4 A;  1TWG A;  5FTK A;  1ZC1 A;  3HU2 A;  2R93 A;  5DYI A;  4DMR A;  4RV0 A;  1IW7 D;  4AZD A;  3IR7 A;  2JIQ A;  1FDI A;  1CR5 A;  1PYU B;  4JP6 A;  4KOD A;  1PQH A;  4FER A;  1YNJ D;  3SUL A;  1YNN D;  2A6E D;  1PQF A;  4AAY A;  2YUJ A;  1DMR A;  2DMR A;  1S3S A;  2ENG A;  2BH0 A;  1E32 A;  3H0G A;  2WAQ A;  1WCM A;  3O5A A;  3GTM A;  2E2H A; 
#chains in the Genus database with same CATH homology
 4JJO A;  2GAE A;  2PI8 A;  3X2P A;  1OA7 A;  1OA9 A;  4FFT A;  2PNW A;  4L48 A;  3X2O A;  4ZM7 A;  2G5D A;  3X2N A;  2PJJ A;  3X2I A;  4JP7 A;  4ENG A;  3ENG A;  1BW3 A;  5GM9 A;  2AE0 X;  1L8F A;  1BW4 A;  4FG4 A;  3SUM A;  3X2J A;  1N10 A;  2G6G A;  5GLX A;  3X2L A;  3X2M A;  4JCW A;  5GLY A;  5H4U A;  1HD5 A;  3SUL A;  3CZB A;  4FG2 A;  4JP6 A;  4FER A;  3X2G A;  2PIC A;  2ENG A;  1WC2 A;  2KQA A;  2BH0 A;  3SUK A;  4AVR A;  3D30 A;  4JS7 A;  3X2K A;  3SUJ A;  2HCZ X;  3M3G A;  3X2H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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