3X2GA

X-ray structure of pccel45a n92d apo form at 100k
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 49
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2gA00
4L48A 3X2NA 4FFTA 3X2PA 4AVRA 4FG4A 3X2LA 5GLXA 2PNWA 3X2JA 1OA9A 2HCZX 4ZM7A 1WC2A 2G5DA 5GM9A 3X2OA 2PICA 3SUMA 1HD5A 2PI8A 5H4UA 2AE0X 2PJJA 3X2IA 4JS7A 1BW3A 2ENGA 3D30A 3ENGA 3X2MA 4JJOA 3SUJA 3CZBA 2BH0A 4JCWA 3X2KA 1N10A 4JP6A 1L8FA 4FERA 4JP7A 1BW4A 2G6GA 2GAEA 5GLYA 3X2GA 3M3GA 2KQAA 3SUKA 3SULA 3X2HA 4FG2A 4ENGA 1OA7A
chains in the Genus database with same CATH superfamily
4L48A 2JIRA 4FFTA 2PJHB 4FG4A 3IR6A 4GA5A 3QQ8A 1OA9A 3GTOA 4RV0A 2WB1A 2YUJA 2G5DA 1YNND 3X2OA 4AAYA 5FTNA 3SUMA 2PMZA 3TIWA 2AE0X 1S3SA 5C1BA 3CQZA 2ENGA 2JA5A 1CZ5A 1YLEA 5FTKA 1DMRA 3DMRA 1SFOA 2VPXA 1Y1WA 2JIQA 2NVYA 2E7ZA 1I50A 1KQFA 4DMRA 5GLYA 3OUGA 1QDNA 3QWZA 3GTJA 3SULA 3X2HA 3X2JA 4CRYG 5T5ID 1SMYD 4AYBA 1KQGA 2CW0D 1PYQA 3ML1A 1YNJD 2R93A 3IR5A 1TWHA 1QCSA 5GM9A 2JIOA 2R7ZA 3FKIA 2PICA 1HD5A 5FTLA 2PJJA 3HU3A 1BW3A 2A6HD 5C18A 1TWGA 2JA6A 2EEOB 1Y5IA 3D30A 3X2MA 1CZ4A 4JJOA 3CZBA 1E32A 1E61A 2BH0A 3QQ7A 2A6ED 2KI8A 1L8FA 1AW8B 1SIWA 4KO8A 1E18A 2G6GA 2GAEA 1TWFA 2KQAA 3GTQA 2JIMA 2NYAA 2R92A 3IR7A 2JIPA 3X2NA 3X2PA 1G8KA 3X2LA 5GLXA 1PT1A 4KDLA 1UHDA 2VUMA 2HCZX 2WAQA 1EU1A 3H0GA 4D7ZB 1FDOA 3HU2A 1UHEA 4GA6A 1VC3B 1G8JA 1R27A 3TM7B 5DYGA 2NVXA 4JS7A 4KDIA 1PYUB 4QIWA 1PQFA 2VPYA 3ENGA 1OGYA 3PLXB 3SUJA 2B63A 1R9TA 1N10A 1E5VA 2VPWA 1E60A 4FERA 1Q16A 1TWCA 4JP7A 1Y1VA 1BW4A 2NAPA 1R7RA 3M3GA 4C2MA 3SUKA 3HKZA 5DYIA 1PQEA 4FG2A 4ENGA 1AA6A 3GTLA 3QC8A 3GTMA 1OA7A 1H0HA 2E2IA 1ZYRD 2IV2X 4AVRA 5FTJA 1K83A 5GLFA 2PNWA 5T5MD 1WLFA 3GTPA 4CRZA 4KLNA 4ZM7A 2VPZA 4KODA 1DMSA 1WC2A 2E2HA 3GTKA 1CR5A 5B6CA 1TWAA 2DMRA 2PI8A 5FTMA 5H4UA 2O5JD 3X2IA 1IW7D 2V3VA 2JA7A 1H5NA 4CS0A 2Y0SA 2YU9A 4AOKB 1PPYA 3X2KA 1ZC1A 4JCWA 3GTGA 1WCMA 2V45A 1I3QA 4JP6A 3CF2A 2A68D 2A69D 1PT0A 2BE5D 1Y4ZA 1TMOA 2C45A 3X2GA 5EPPA 4NOHA 1PQHA 3HU1A 4AONB 4AZDA 1FDIA 3O5AA
chains in the Genus database with same CATH topology
4L48A 3X2NA 4FFTA 3X2PA 4AVRA 4FG4A 3X2LA 5GLXA 2PNWA 3X2JA 1OA9A 2HCZX 4ZM7A 1WC2A 2G5DA 5GM9A 3X2OA 2PICA 3SUMA 1HD5A 2PI8A 5H4UA 2AE0X 2PJJA 3X2IA 4JS7A 1BW3A 2ENGA 3D30A 3ENGA 3X2MA 4JJOA 3SUJA 3CZBA 2BH0A 4JCWA 3X2KA 1N10A 4JP6A 1L8FA 4FERA 4JP7A 1BW4A 2G6GA 2GAEA 5GLYA 3X2GA 3M3GA 2KQAA 3SUKA 3SULA 3X2HA 4FG2A 4ENGA 1OA7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4L48 A;  3X2N A;  4FFT A;  3X2P A;  4AVR A;  4FG4 A;  3X2L A;  5GLX A;  2PNW A;  3X2J A;  1OA9 A;  2HCZ X;  4ZM7 A;  1WC2 A;  2G5D A;  5GM9 A;  3X2O A;  2PIC A;  3SUM A;  1HD5 A;  2PI8 A;  5H4U A;  2AE0 X;  2PJJ A;  3X2I A;  4JS7 A;  1BW3 A;  2ENG A;  3D30 A;  3ENG A;  3X2M A;  4JJO A;  3SUJ A;  3CZB A;  2BH0 A;  4JCW A;  3X2K A;  1N10 A;  4JP6 A;  1L8F A;  4FER A;  4JP7 A;  1BW4 A;  2G6G A;  2GAE A;  5GLY A;  3X2G A;  3M3G A;  2KQA A;  3SUK A;  3SUL A;  3X2H A;  4FG2 A;  4ENG A;  1OA7 A; 
#chains in the Genus database with same CATH topology
 4L48 A;  2JIR A;  4FFT A;  2PJH B;  4FG4 A;  3IR6 A;  4GA5 A;  3QQ8 A;  1OA9 A;  3GTO A;  4RV0 A;  2WB1 A;  2YUJ A;  2G5D A;  1YNN D;  3X2O A;  4AAY A;  5FTN A;  3SUM A;  2PMZ A;  3TIW A;  2AE0 X;  1S3S A;  5C1B A;  3CQZ A;  2ENG A;  2JA5 A;  1CZ5 A;  1YLE A;  5FTK A;  1DMR A;  3DMR A;  1SFO A;  2VPX A;  1Y1W A;  2JIQ A;  2NVY A;  2E7Z A;  1I50 A;  1KQF A;  4DMR A;  5GLY A;  3OUG A;  1QDN A;  3QWZ A;  3GTJ A;  3SUL A;  3X2H A;  3X2J A;  4CRY G;  5T5I D;  1SMY D;  4AYB A;  1KQG A;  2CW0 D;  1PYQ A;  3ML1 A;  1YNJ D;  2R93 A;  3IR5 A;  1TWH A;  1QCS A;  5GM9 A;  2JIO A;  2R7Z A;  3FKI A;  2PIC A;  1HD5 A;  5FTL A;  2PJJ A;  3HU3 A;  1BW3 A;  2A6H D;  5C18 A;  1TWG A;  2JA6 A;  2EEO B;  1Y5I A;  3D30 A;  3X2M A;  1CZ4 A;  4JJO A;  3CZB A;  1E32 A;  1E61 A;  2BH0 A;  3QQ7 A;  2A6E D;  2KI8 A;  1L8F A;  1AW8 B;  1SIW A;  4KO8 A;  1E18 A;  2G6G A;  2GAE A;  1TWF A;  2KQA A;  3GTQ A;  2JIM A;  2NYA A;  2R92 A;  3IR7 A;  2JIP A;  3X2N A;  3X2P A;  1G8K A;  3X2L A;  5GLX A;  1PT1 A;  4KDL A;  1UHD A;  2VUM A;  2HCZ X;  2WAQ A;  1EU1 A;  3H0G A;  4D7Z B;  1FDO A;  3HU2 A;  1UHE A;  4GA6 A;  1VC3 B;  1G8J A;  1R27 A;  3TM7 B;  5DYG A;  2NVX A;  4JS7 A;  4KDI A;  1PYU B;  4QIW A;  1PQF A;  2VPY A;  3ENG A;  1OGY A;  3PLX B;  3SUJ A;  2B63 A;  1R9T A;  1N10 A;  1E5V A;  2VPW A;  1E60 A;  4FER A;  1Q16 A;  1TWC A;  4JP7 A;  1Y1V A;  1BW4 A;  2NAP A;  1R7R A;  3M3G A;  4C2M A;  3SUK A;  3HKZ A;  5DYI A;  1PQE A;  4FG2 A;  4ENG A;  1AA6 A;  3GTL A;  3QC8 A;  3GTM A;  1OA7 A;  1H0H A;  2E2I A;  1ZYR D;  2IV2 X;  4AVR A;  5FTJ A;  1K83 A;  5GLF A;  2PNW A;  5T5M D;  1WLF A;  3GTP A;  4CRZ A;  4KLN A;  4ZM7 A;  2VPZ A;  4KOD A;  1DMS A;  1WC2 A;  2E2H A;  3GTK A;  1CR5 A;  5B6C A;  1TWA A;  2DMR A;  2PI8 A;  5FTM A;  5H4U A;  2O5J D;  3X2I A;  1IW7 D;  2V3V A;  2JA7 A;  1H5N A;  4CS0 A;  2Y0S A;  2YU9 A;  4AOK B;  1PPY A;  3X2K A;  1ZC1 A;  4JCW A;  3GTG A;  1WCM A;  2V45 A;  1I3Q A;  4JP6 A;  3CF2 A;  2A68 D;  2A69 D;  1PT0 A;  2BE5 D;  1Y4Z A;  1TMO A;  2C45 A;  3X2G A;  5EPP A;  4NOH A;  1PQH A;  3HU1 A;  4AON B;  4AZD A;  1FDI A;  3O5A A; 
#chains in the Genus database with same CATH homology
 4L48 A;  3X2N A;  4FFT A;  3X2P A;  4AVR A;  4FG4 A;  3X2L A;  5GLX A;  2PNW A;  3X2J A;  1OA9 A;  2HCZ X;  4ZM7 A;  1WC2 A;  2G5D A;  5GM9 A;  3X2O A;  2PIC A;  3SUM A;  1HD5 A;  2PI8 A;  5H4U A;  2AE0 X;  2PJJ A;  3X2I A;  4JS7 A;  1BW3 A;  2ENG A;  3D30 A;  3ENG A;  3X2M A;  4JJO A;  3SUJ A;  3CZB A;  2BH0 A;  4JCW A;  3X2K A;  1N10 A;  4JP6 A;  1L8F A;  4FER A;  4JP7 A;  1BW4 A;  2G6G A;  2GAE A;  5GLY A;  3X2G A;  3M3G A;  2KQA A;  3SUK A;  3SUL A;  3X2H A;  4FG2 A;  4ENG A;  1OA7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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