3X2GA

X-ray structure of pccel45a n92d apo form at 100k
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
total genus 49
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2gA00
3SUJA 2G6GA 4AVRA 1BW3A 2HCZX 2KQAA 4JCWA 4JS7A 1HD5A 3X2KA 3ENGA 2PICA 4JP6A 2AE0X 3X2HA 3X2LA 4FG2A 1BW4A 3M3GA 3X2JA 1WC2A 4FG4A 3D30A 2PI8A 3X2PA 4L48A 2G5DA 2ENGA 4JP7A 1OA7A 3SUMA 3CZBA 1N10A 2BH0A 2GAEA 5GLYA 1L8FA 4JJOA 2PNWA 3X2IA 3SUKA 3X2GA 3X2OA 3X2MA 1OA9A 4FERA 3X2NA 5GM9A 3SULA 5GLXA 2PJJA 4FFTA 5H4UA 4ZM7A 4ENGA
chains in the Genus database with same CATH superfamily
1E5VA 2VPYA 1TWCA 2DMRA 4D7ZB 3QC8A 2HCZX 5T5MD 3FKIA 3HU3A 3X2KA 1E60A 2WAQA 3GTPA 1FDOA 1BW4A 1R9TA 3CQZA 1E18A 1YLEA 2V3VA 3H0GA 4FG4A 3GTGA 1PT0A 3ML1A 2NYAA 2CW0D 1OA7A 1VC3B 4KDLA 4RV0A 1PQFA 2YU9A 1H5NA 1WCMA 2GAEA 2VPXA 3PLXB 2NVXA 1KQFA 2A69D 4CS0A 3X2GA 3X2MA 2R93A 1CZ4A 2JIMA 4KDIA 4AONB 1G8KA 1Y4ZA 1TMOA 2A68D 5T5ID 1OGYA 2NAPA 1TWFA 1I3QA 5FTMA 2A6ED 1TWHA 3SUJA 2G6GA 1SMYD 2BE5D 1UHDA 3IR5A 5DYIA 5FTNA 2VUMA 4JCWA 1HD5A 1Q16A 4NOHA 2PICA 1I50A 4JP6A 2AE0X 3X2HA 4CRZA 4C2MA 3X2LA 2C45A 1PQEA 2JA6A 4AZDA 5EPPA 2PI8A 2JIQA 2R92A 3X2PA 4L48A 3CF2A 4JP7A 3SUMA 3GTMA 5B6CA 4QIWA 1FDIA 4GA6A 1E32A 1YNND 1YNJD 4JJOA 1G8JA 4GA5A 1Y1WA 2IV2X 1OA9A 3QWZA 2O5JD 3GTKA 1PT1A 4FERA 1CR5A 3GTJA 2YUJA 3X2NA 3SULA 5H4UA 2JIRA 3TM7B 4ENGA 3IR7A 4CRYG 1PPYA 1Y5IA 1TWGA 1BW3A 2E2HA 4DMRA 1S3SA 2E2IA 1PQHA 3ENGA 2JA5A 1SFOA 1QDNA 2PJHB 2EEOB 4FG2A 3IR6A 3QQ7A 3M3GA 1H0HA 2E7ZA 3X2JA 2VPZA 1TWAA 2G5DA 3HU1A 1ZC1A 1AA6A 3CZBA 2JIPA 2BH0A 5GLYA 4KO8A 3DMRA 1ZYRD 2PNWA 3X2IA 1DMRA 3SUKA 1K83A 3GTQA 1KQGA 1R27A 4KODA 1WLFA 1PYQA 2Y0SA 4AAYA 2KI8A 1Y1VA 4AOKB 2A6HD 2PJJA 4FFTA 2B63A 3GTOA 3TIWA 4AVRA 1E61A 2WB1A 2PMZA 2KQAA 4JS7A 3GTLA 2JIOA 2R7ZA 3QQ8A 4AYBA 1CZ5A 5FTJA 3HKZA 2V45A 5C18A 1WC2A 5GLFA 1PYUB 3D30A 1UHEA 4KLNA 1R7RA 2ENGA 5FTKA 1N10A 1EU1A 1SIWA 1L8FA 1DMSA 2NVYA 1AW8B 2VPWA 3O5AA 3X2OA 2JA7A 3HU2A 1IW7D 1QCSA 3OUGA 5GM9A 5DYGA 5GLXA 4ZM7A 5FTLA 5C1BA
chains in the Genus database with same CATH topology
3SUJA 2G6GA 4AVRA 1BW3A 2HCZX 2KQAA 4JCWA 4JS7A 1HD5A 3X2KA 3ENGA 2PICA 4JP6A 2AE0X 3X2HA 3X2LA 4FG2A 1BW4A 3M3GA 3X2JA 1WC2A 4FG4A 3D30A 2PI8A 3X2PA 4L48A 2G5DA 2ENGA 4JP7A 1OA7A 3SUMA 3CZBA 1N10A 2BH0A 2GAEA 5GLYA 1L8FA 4JJOA 2PNWA 3X2IA 3SUKA 3X2GA 3X2OA 3X2MA 1OA9A 4FERA 3X2NA 5GM9A 3SULA 5GLXA 2PJJA 4FFTA 5H4UA 4ZM7A 4ENGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SUJ A;  2G6G A;  4AVR A;  1BW3 A;  2HCZ X;  2KQA A;  4JCW A;  4JS7 A;  1HD5 A;  3X2K A;  3ENG A;  2PIC A;  4JP6 A;  2AE0 X;  3X2H A;  3X2L A;  4FG2 A;  1BW4 A;  3M3G A;  3X2J A;  1WC2 A;  4FG4 A;  3D30 A;  2PI8 A;  3X2P A;  4L48 A;  2G5D A;  2ENG A;  4JP7 A;  1OA7 A;  3SUM A;  3CZB A;  1N10 A;  2BH0 A;  2GAE A;  5GLY A;  1L8F A;  4JJO A;  2PNW A;  3X2I A;  3SUK A;  3X2G A;  3X2O A;  3X2M A;  1OA9 A;  4FER A;  3X2N A;  5GM9 A;  3SUL A;  5GLX A;  2PJJ A;  4FFT A;  5H4U A;  4ZM7 A;  4ENG A; 
#chains in the Genus database with same CATH topology
 1E5V A;  2VPY A;  1TWC A;  2DMR A;  4D7Z B;  3QC8 A;  2HCZ X;  5T5M D;  3FKI A;  3HU3 A;  3X2K A;  1E60 A;  2WAQ A;  3GTP A;  1FDO A;  1BW4 A;  1R9T A;  3CQZ A;  1E18 A;  1YLE A;  2V3V A;  3H0G A;  4FG4 A;  3GTG A;  1PT0 A;  3ML1 A;  2NYA A;  2CW0 D;  1OA7 A;  1VC3 B;  4KDL A;  4RV0 A;  1PQF A;  2YU9 A;  1H5N A;  1WCM A;  2GAE A;  2VPX A;  3PLX B;  2NVX A;  1KQF A;  2A69 D;  4CS0 A;  3X2G A;  3X2M A;  2R93 A;  1CZ4 A;  2JIM A;  4KDI A;  4AON B;  1G8K A;  1Y4Z A;  1TMO A;  2A68 D;  5T5I D;  1OGY A;  2NAP A;  1TWF A;  1I3Q A;  5FTM A;  2A6E D;  1TWH A;  3SUJ A;  2G6G A;  1SMY D;  2BE5 D;  1UHD A;  3IR5 A;  5DYI A;  5FTN A;  2VUM A;  4JCW A;  1HD5 A;  1Q16 A;  4NOH A;  2PIC A;  1I50 A;  4JP6 A;  2AE0 X;  3X2H A;  4CRZ A;  4C2M A;  3X2L A;  2C45 A;  1PQE A;  2JA6 A;  4AZD A;  5EPP A;  2PI8 A;  2JIQ A;  2R92 A;  3X2P A;  4L48 A;  3CF2 A;  4JP7 A;  3SUM A;  3GTM A;  5B6C A;  4QIW A;  1FDI A;  4GA6 A;  1E32 A;  1YNN D;  1YNJ D;  4JJO A;  1G8J A;  4GA5 A;  1Y1W A;  2IV2 X;  1OA9 A;  3QWZ A;  2O5J D;  3GTK A;  1PT1 A;  4FER A;  1CR5 A;  3GTJ A;  2YUJ A;  3X2N A;  3SUL A;  5H4U A;  2JIR A;  3TM7 B;  4ENG A;  3IR7 A;  4CRY G;  1PPY A;  1Y5I A;  1TWG A;  1BW3 A;  2E2H A;  4DMR A;  1S3S A;  2E2I A;  1PQH A;  3ENG A;  2JA5 A;  1SFO A;  1QDN A;  2PJH B;  2EEO B;  4FG2 A;  3IR6 A;  3QQ7 A;  3M3G A;  1H0H A;  2E7Z A;  3X2J A;  2VPZ A;  1TWA A;  2G5D A;  3HU1 A;  1ZC1 A;  1AA6 A;  3CZB A;  2JIP A;  2BH0 A;  5GLY A;  4KO8 A;  3DMR A;  1ZYR D;  2PNW A;  3X2I A;  1DMR A;  3SUK A;  1K83 A;  3GTQ A;  1KQG A;  1R27 A;  4KOD A;  1WLF A;  1PYQ A;  2Y0S A;  4AAY A;  2KI8 A;  1Y1V A;  4AOK B;  2A6H D;  2PJJ A;  4FFT A;  2B63 A;  3GTO A;  3TIW A;  4AVR A;  1E61 A;  2WB1 A;  2PMZ A;  2KQA A;  4JS7 A;  3GTL A;  2JIO A;  2R7Z A;  3QQ8 A;  4AYB A;  1CZ5 A;  5FTJ A;  3HKZ A;  2V45 A;  5C18 A;  1WC2 A;  5GLF A;  1PYU B;  3D30 A;  1UHE A;  4KLN A;  1R7R A;  2ENG A;  5FTK A;  1N10 A;  1EU1 A;  1SIW A;  1L8F A;  1DMS A;  2NVY A;  1AW8 B;  2VPW A;  3O5A A;  3X2O A;  2JA7 A;  3HU2 A;  1IW7 D;  1QCS A;  3OUG A;  5GM9 A;  5DYG A;  5GLX A;  4ZM7 A;  5FTL A;  5C1B A; 
#chains in the Genus database with same CATH homology
 3SUJ A;  2G6G A;  4AVR A;  1BW3 A;  2HCZ X;  2KQA A;  4JCW A;  4JS7 A;  1HD5 A;  3X2K A;  3ENG A;  2PIC A;  4JP6 A;  2AE0 X;  3X2H A;  3X2L A;  4FG2 A;  1BW4 A;  3M3G A;  3X2J A;  1WC2 A;  4FG4 A;  3D30 A;  2PI8 A;  3X2P A;  4L48 A;  2G5D A;  2ENG A;  4JP7 A;  1OA7 A;  3SUM A;  3CZB A;  1N10 A;  2BH0 A;  2GAE A;  5GLY A;  1L8F A;  4JJO A;  2PNW A;  3X2I A;  3SUK A;  3X2G A;  3X2O A;  3X2M A;  1OA9 A;  4FER A;  3X2N A;  5GM9 A;  3SUL A;  5GLX A;  2PJJ A;  4FFT A;  5H4U A;  4ZM7 A;  4ENG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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