3X2OA

Neutron and x-ray joint refined structure of pccel45a apo form at 298k.
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
179
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 49
structure length 179
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2oA00
3ENGA 5H4UA 2G6GA 3SUJA 2AE0X 2HCZX 2BH0A 1BW3A 4JJOA 1WC2A 2PJJA 2PNWA 2PICA 4FG2A 3X2LA 4AVRA 4ENGA 3X2NA 1L8FA 4ZM7A 4JCWA 4JS7A 3X2KA 2ENGA 2KQAA 3SUKA 1N10A 1OA9A 2GAEA 3CZBA 2PI8A 4JP7A 4FERA 2G5DA 3X2GA 4L48A 5GLXA 3SUMA 1HD5A 1BW4A 3X2HA 4FG4A 3SULA 3X2MA 3X2PA 3X2JA 4FFTA 5GM9A 3M3GA 4JP6A 1OA7A 5GLYA 3X2OA 3D30A 3X2IA
chains in the Genus database with same CATH superfamily
5FTJA 1E60A 4D7ZB 4CRZA 5T5MD 3HU2A 1WC2A 4FG2A 4ENGA 1H0HA 4KLNA 2ENGA 4RV0A 1OA9A 5DYGA 3FKIA 2PI8A 4JP7A 2JIMA 1TWGA 1YLEA 1E5VA 1UHDA 4NOHA 4AOKB 4KO8A 2IV2X 1BW4A 1G8JA 3HU3A 4FG4A 3TIWA 3CQZA 1SMYD 3X2MA 1AA6A 3X2PA 2A6HD 4FFTA 3GTKA 2E2HA 1I3QA 3IR7A 5FTMA 5GLYA 5FTKA 2NVXA 2JA5A 4GA6A 3D30A 4AYBA 1I50A 3GTLA 1DMRA 5DYIA 2BE5D 4KODA 2O5JD 2HCZX 4CS0A 2WB1A 1QDNA 2V45A 1PQFA 1TWFA 3X2LA 4C2MA 1L8FA 1E32A 2NAPA 1CZ5A 2JA6A 3QQ8A 2R93A 2KQAA 4QIWA 2VPZA 1FDIA 2CW0D 2YUJA 3IR6A 1ZYRD 3CF2A 4FERA 1YNJD 2VPWA 2NYAA 1PYQA 3DMRA 5T5ID 2E7ZA 2YU9A 1TWAA 1QCSA 1R9TA 2R7ZA 1Y4ZA 3QQ7A 2JA7A 3X2IA 1PPYA 1KQGA 2JIPA 1FDOA 1EU1A 1CR5A 2AE0X 1ZC1A 2PJHB 2A6ED 2NVYA 1BW3A 4JJOA 3ML1A 1TWHA 2PICA 3HU1A 1R7RA 3X2NA 2EEOB 4ZM7A 3X2KA 1IW7D 1YNND 1UHEA 1R27A 5FTLA 2B63A 1N10A 1G8KA 5C18A 2E2IA 4KDLA 1PQEA 3X2GA 2C45A 4AONB 5C1BA 4AAYA 5B6CA 3X2HA 3GTOA 1CZ4A 1VC3B 2A69D 3GTJA 1AW8B 1Q16A 1DMSA 3QWZA 3TM7B 3X2JA 2DMRA 5GM9A 4GA5A 1Y1WA 2JIRA 3M3GA 5FTNA 4DMRA 2KI8A 3GTQA 2WAQA 1SIWA 3X2OA 2R92A 2VPXA 1PT1A 2JIQA 2PMZA 3ENGA 4CRYG 5H4UA 2G6GA 3SUJA 3QC8A 3GTGA 1WCMA 2BH0A 2VPYA 1K83A 3GTPA 2PJJA 2PNWA 4AVRA 1WLFA 1SFOA 2JIOA 1E18A 4JCWA 4JS7A 5EPPA 1PQHA 4AZDA 1TWCA 3OUGA 3SUKA 3GTMA 5GLFA 2GAEA 3CZBA 3IR5A 3HKZA 2G5DA 1Y5IA 2VUMA 2V3VA 1S3SA 1TMOA 4L48A 5GLXA 1PT0A 1Y1VA 3SUMA 1HD5A 1H5NA 3SULA 3O5AA 3PLXB 4KDIA 3H0GA 1E61A 4JP6A 2A68D 1OA7A 1KQFA 1OGYA 1PYUB 2Y0SA
chains in the Genus database with same CATH topology
3ENGA 5H4UA 2G6GA 3SUJA 2AE0X 2HCZX 2BH0A 1BW3A 4JJOA 1WC2A 2PJJA 2PNWA 2PICA 4FG2A 3X2LA 4AVRA 4ENGA 3X2NA 1L8FA 4ZM7A 4JCWA 4JS7A 3X2KA 2ENGA 2KQAA 3SUKA 1N10A 1OA9A 2GAEA 3CZBA 2PI8A 4JP7A 4FERA 2G5DA 3X2GA 4L48A 5GLXA 3SUMA 1HD5A 1BW4A 3X2HA 4FG4A 3SULA 3X2MA 3X2PA 3X2JA 4FFTA 5GM9A 3M3GA 4JP6A 1OA7A 5GLYA 3X2OA 3D30A 3X2IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ENG A;  5H4U A;  2G6G A;  3SUJ A;  2AE0 X;  2HCZ X;  2BH0 A;  1BW3 A;  4JJO A;  1WC2 A;  2PJJ A;  2PNW A;  2PIC A;  4FG2 A;  3X2L A;  4AVR A;  4ENG A;  3X2N A;  1L8F A;  4ZM7 A;  4JCW A;  4JS7 A;  3X2K A;  2ENG A;  2KQA A;  3SUK A;  1N10 A;  1OA9 A;  2GAE A;  3CZB A;  2PI8 A;  4JP7 A;  4FER A;  2G5D A;  3X2G A;  4L48 A;  5GLX A;  3SUM A;  1HD5 A;  1BW4 A;  3X2H A;  4FG4 A;  3SUL A;  3X2M A;  3X2P A;  3X2J A;  4FFT A;  5GM9 A;  3M3G A;  4JP6 A;  1OA7 A;  5GLY A;  3X2O A;  3D30 A;  3X2I A; 
#chains in the Genus database with same CATH topology
 5FTJ A;  1E60 A;  4D7Z B;  4CRZ A;  5T5M D;  3HU2 A;  1WC2 A;  4FG2 A;  4ENG A;  1H0H A;  4KLN A;  2ENG A;  4RV0 A;  1OA9 A;  5DYG A;  3FKI A;  2PI8 A;  4JP7 A;  2JIM A;  1TWG A;  1YLE A;  1E5V A;  1UHD A;  4NOH A;  4AOK B;  4KO8 A;  2IV2 X;  1BW4 A;  1G8J A;  3HU3 A;  4FG4 A;  3TIW A;  3CQZ A;  1SMY D;  3X2M A;  1AA6 A;  3X2P A;  2A6H D;  4FFT A;  3GTK A;  2E2H A;  1I3Q A;  3IR7 A;  5FTM A;  5GLY A;  5FTK A;  2NVX A;  2JA5 A;  4GA6 A;  3D30 A;  4AYB A;  1I50 A;  3GTL A;  1DMR A;  5DYI A;  2BE5 D;  4KOD A;  2O5J D;  2HCZ X;  4CS0 A;  2WB1 A;  1QDN A;  2V45 A;  1PQF A;  1TWF A;  3X2L A;  4C2M A;  1L8F A;  1E32 A;  2NAP A;  1CZ5 A;  2JA6 A;  3QQ8 A;  2R93 A;  2KQA A;  4QIW A;  2VPZ A;  1FDI A;  2CW0 D;  2YUJ A;  3IR6 A;  1ZYR D;  3CF2 A;  4FER A;  1YNJ D;  2VPW A;  2NYA A;  1PYQ A;  3DMR A;  5T5I D;  2E7Z A;  2YU9 A;  1TWA A;  1QCS A;  1R9T A;  2R7Z A;  1Y4Z A;  3QQ7 A;  2JA7 A;  3X2I A;  1PPY A;  1KQG A;  2JIP A;  1FDO A;  1EU1 A;  1CR5 A;  2AE0 X;  1ZC1 A;  2PJH B;  2A6E D;  2NVY A;  1BW3 A;  4JJO A;  3ML1 A;  1TWH A;  2PIC A;  3HU1 A;  1R7R A;  3X2N A;  2EEO B;  4ZM7 A;  3X2K A;  1IW7 D;  1YNN D;  1UHE A;  1R27 A;  5FTL A;  2B63 A;  1N10 A;  1G8K A;  5C18 A;  2E2I A;  4KDL A;  1PQE A;  3X2G A;  2C45 A;  4AON B;  5C1B A;  4AAY A;  5B6C A;  3X2H A;  3GTO A;  1CZ4 A;  1VC3 B;  2A69 D;  3GTJ A;  1AW8 B;  1Q16 A;  1DMS A;  3QWZ A;  3TM7 B;  3X2J A;  2DMR A;  5GM9 A;  4GA5 A;  1Y1W A;  2JIR A;  3M3G A;  5FTN A;  4DMR A;  2KI8 A;  3GTQ A;  2WAQ A;  1SIW A;  3X2O A;  2R92 A;  2VPX A;  1PT1 A;  2JIQ A;  2PMZ A;  3ENG A;  4CRY G;  5H4U A;  2G6G A;  3SUJ A;  3QC8 A;  3GTG A;  1WCM A;  2BH0 A;  2VPY A;  1K83 A;  3GTP A;  2PJJ A;  2PNW A;  4AVR A;  1WLF A;  1SFO A;  2JIO A;  1E18 A;  4JCW A;  4JS7 A;  5EPP A;  1PQH A;  4AZD A;  1TWC A;  3OUG A;  3SUK A;  3GTM A;  5GLF A;  2GAE A;  3CZB A;  3IR5 A;  3HKZ A;  2G5D A;  1Y5I A;  2VUM A;  2V3V A;  1S3S A;  1TMO A;  4L48 A;  5GLX A;  1PT0 A;  1Y1V A;  3SUM A;  1HD5 A;  1H5N A;  3SUL A;  3O5A A;  3PLX B;  4KDI A;  3H0G A;  1E61 A;  4JP6 A;  2A68 D;  1OA7 A;  1KQF A;  1OGY A;  1PYU B;  2Y0S A; 
#chains in the Genus database with same CATH homology
 3ENG A;  5H4U A;  2G6G A;  3SUJ A;  2AE0 X;  2HCZ X;  2BH0 A;  1BW3 A;  4JJO A;  1WC2 A;  2PJJ A;  2PNW A;  2PIC A;  4FG2 A;  3X2L A;  4AVR A;  4ENG A;  3X2N A;  1L8F A;  4ZM7 A;  4JCW A;  4JS7 A;  3X2K A;  2ENG A;  2KQA A;  3SUK A;  1N10 A;  1OA9 A;  2GAE A;  3CZB A;  2PI8 A;  4JP7 A;  4FER A;  2G5D A;  3X2G A;  4L48 A;  5GLX A;  3SUM A;  1HD5 A;  1BW4 A;  3X2H A;  4FG4 A;  3SUL A;  3X2M A;  3X2P A;  3X2J A;  4FFT A;  5GM9 A;  3M3G A;  4JP6 A;  1OA7 A;  5GLY A;  3X2O A;  3D30 A;  3X2I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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