1L8FA

Structure of 20k-endoglucanase from melanocarpus albomyces at 1.8 a
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
ANGQSTRYWDCCKPSCGWRGKGPVNQPVYSCDANFQRIHDFDAVSGCEGGPAFSCADHSPWAINDNLSYGFAATALSGQTEESWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNHFDLNIPGGGVGLFDGCTPQFGGLPGARYGGISSRQECDSFPEPLKPGCQWRFDWFQNADNPSFTFERVQCPEELVARTGCRRHDDGGFA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Endoglucanase
publication title Structure of 20K endoglucanase from Melanocarpus albomyces at 1.8 A resolution.
pubmed doi rcsb
total genus 69
structure length 207
sequence length 207
ec nomenclature ec 3.2.1.4: Cellulase.
pdb deposition date 2002-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 1l8fA00
2KQAA 4JS7A 2GAEA 3X2NA 3SUKA 5GLXA 3SUJA 2AE0X 2PJJA 4FERA 3D30A 5H4UA 3X2OA 3X2MA 1BW3A 4FFTA 1HD5A 3X2IA 4FG2A 3M3GA 4JJOA 2PICA 4L48A 1BW4A 4ZM7A 3SULA 1L8FA 4JP7A 1WC2A 5GLYA 3X2PA 1OA9A 3X2HA 2HCZX 2PI8A 2PNWA 4JCWA 4ENGA 3CZBA 2G6GA 5GM9A 3X2JA 4JP6A 2BH0A 2ENGA 4FG4A 3SUMA 1OA7A 3X2GA 3X2KA 2G5DA 3X2LA 1N10A 4AVRA 3ENGA
chains in the Genus database with same CATH superfamily
3FKIA 5FTKA 1TWCA 1SFOA 1CZ5A 4KDIA 4FERA 5DYGA 3D30A 2VPZA 2JA7A 3GTMA 3X2MA 2V3VA 1BW3A 1PT1A 1HD5A 1PQEA 1YLEA 3IR6A 3M3GA 2R93A 2A68D 1FDIA 2IV2X 3SULA 1PYUB 4ZM7A 1I50A 1CR5A 2JIMA 5GLYA 3X2PA 1G8JA 4KLNA 1TWGA 2E7ZA 3HU3A 2PNWA 3GTLA 4ENGA 4GA6A 1DMSA 3DMRA 3TM7B 2ENGA 4FG4A 1R9TA 1FDOA 1E32A 1WLFA 5C18A 2JA6A 2BE5D 4CRZA 4KODA 2VPXA 4AVRA 4GA5A 5FTLA 3X2NA 1OGYA 1PQFA 2DMRA 3SUKA 4D7ZB 1K83A 2R92A 3H0GA 1E18A 1EU1A 1QDNA 1G8KA 2VPYA 3HU2A 3IR5A 3X2OA 1Y1VA 3CQZA 4AOKB 2YU9A 3HU1A 2E2IA 1BW4A 1ZYRD 2PICA 4JJOA 4NOHA 5FTJA 2CW0D 3QWZA 2NVYA 3GTGA 1WC2A 1KQFA 1AA6A 2A69D 5EPPA 1R27A 4JCWA 3IR7A 2G6GA 5GM9A 1TWHA 3X2JA 4JP6A 1H5NA 1YNJD 3CF2A 5T5ID 2B63A 2JA5A 1AW8B 2G5DA 5FTNA 2PMZA 2WAQA 2YUJA 5GLFA 5GLXA 4AAYA 5B6CA 2VUMA 2O5JD 2A6ED 2KQAA 2GAEA 3SUJA 3PLXB 1UHEA 2AE0X 4QIWA 3GTOA 1SMYD 2VPWA 2PJHB 1TWAA 2KI8A 4KDLA 5DYIA 2A6HD 3X2IA 1R7RA 4FG2A 1TMOA 1DMRA 4L48A 2E2HA 3O5AA 1L8FA 2WB1A 4JP7A 2NYAA 5C1BA 1E5VA 2NVXA 1OA9A 1KQGA 1ZC1A 2NAPA 3GTPA 2R7ZA 3HKZA 2JIRA 3CZBA 3OUGA 4DMRA 3GTQA 4AONB 3SUMA 3GTJA 3X2GA 1E61A 3QQ8A 1PPYA 4RV0A 3X2LA 3QQ7A 3ML1A 3QC8A 1N10A 3ENGA 1VC3B 1PT0A 4AZDA 4JS7A 1Q16A 1PYQA 4CRYG 4AYBA 2PJJA 2Y0SA 2V45A 5H4UA 1IW7D 1Y5IA 2JIQA 4FFTA 1SIWA 1Y1WA 1H0HA 1TWFA 2JIPA 1I3QA 5T5MD 2EEOB 1PQHA 1E60A 1YNND 1WCMA 5FTMA 3GTKA 2C45A 3X2HA 2HCZX 1S3SA 2PI8A 3TIWA 4CS0A 1CZ4A 1UHDA 1QCSA 2BH0A 4C2MA 1OA7A 3X2KA 1Y4ZA 4KO8A 2JIOA
chains in the Genus database with same CATH topology
2KQAA 4JS7A 2GAEA 3X2NA 3SUKA 5GLXA 3SUJA 2AE0X 2PJJA 4FERA 3D30A 5H4UA 3X2OA 3X2MA 1BW3A 4FFTA 1HD5A 3X2IA 4FG2A 3M3GA 4JJOA 2PICA 4L48A 1BW4A 4ZM7A 3SULA 1L8FA 4JP7A 1WC2A 5GLYA 3X2PA 1OA9A 3X2HA 2HCZX 2PI8A 2PNWA 4JCWA 4ENGA 3CZBA 2G6GA 5GM9A 3X2JA 4JP6A 2BH0A 2ENGA 4FG4A 3SUMA 1OA7A 3X2GA 3X2KA 2G5DA 3X2LA 1N10A 4AVRA 3ENGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KQA A;  4JS7 A;  2GAE A;  3X2N A;  3SUK A;  5GLX A;  3SUJ A;  2AE0 X;  2PJJ A;  4FER A;  3D30 A;  5H4U A;  3X2O A;  3X2M A;  1BW3 A;  4FFT A;  1HD5 A;  3X2I A;  4FG2 A;  3M3G A;  4JJO A;  2PIC A;  4L48 A;  1BW4 A;  4ZM7 A;  3SUL A;  1L8F A;  4JP7 A;  1WC2 A;  5GLY A;  3X2P A;  1OA9 A;  3X2H A;  2HCZ X;  2PI8 A;  2PNW A;  4JCW A;  4ENG A;  3CZB A;  2G6G A;  5GM9 A;  3X2J A;  4JP6 A;  2BH0 A;  2ENG A;  4FG4 A;  3SUM A;  1OA7 A;  3X2G A;  3X2K A;  2G5D A;  3X2L A;  1N10 A;  4AVR A;  3ENG A; 
#chains in the Genus database with same CATH topology
 3FKI A;  5FTK A;  1TWC A;  1SFO A;  1CZ5 A;  4KDI A;  4FER A;  5DYG A;  3D30 A;  2VPZ A;  2JA7 A;  3GTM A;  3X2M A;  2V3V A;  1BW3 A;  1PT1 A;  1HD5 A;  1PQE A;  1YLE A;  3IR6 A;  3M3G A;  2R93 A;  2A68 D;  1FDI A;  2IV2 X;  3SUL A;  1PYU B;  4ZM7 A;  1I50 A;  1CR5 A;  2JIM A;  5GLY A;  3X2P A;  1G8J A;  4KLN A;  1TWG A;  2E7Z A;  3HU3 A;  2PNW A;  3GTL A;  4ENG A;  4GA6 A;  1DMS A;  3DMR A;  3TM7 B;  2ENG A;  4FG4 A;  1R9T A;  1FDO A;  1E32 A;  1WLF A;  5C18 A;  2JA6 A;  2BE5 D;  4CRZ A;  4KOD A;  2VPX A;  4AVR A;  4GA5 A;  5FTL A;  3X2N A;  1OGY A;  1PQF A;  2DMR A;  3SUK A;  4D7Z B;  1K83 A;  2R92 A;  3H0G A;  1E18 A;  1EU1 A;  1QDN A;  1G8K A;  2VPY A;  3HU2 A;  3IR5 A;  3X2O A;  1Y1V A;  3CQZ A;  4AOK B;  2YU9 A;  3HU1 A;  2E2I A;  1BW4 A;  1ZYR D;  2PIC A;  4JJO A;  4NOH A;  5FTJ A;  2CW0 D;  3QWZ A;  2NVY A;  3GTG A;  1WC2 A;  1KQF A;  1AA6 A;  2A69 D;  5EPP A;  1R27 A;  4JCW A;  3IR7 A;  2G6G A;  5GM9 A;  1TWH A;  3X2J A;  4JP6 A;  1H5N A;  1YNJ D;  3CF2 A;  5T5I D;  2B63 A;  2JA5 A;  1AW8 B;  2G5D A;  5FTN A;  2PMZ A;  2WAQ A;  2YUJ A;  5GLF A;  5GLX A;  4AAY A;  5B6C A;  2VUM A;  2O5J D;  2A6E D;  2KQA A;  2GAE A;  3SUJ A;  3PLX B;  1UHE A;  2AE0 X;  4QIW A;  3GTO A;  1SMY D;  2VPW A;  2PJH B;  1TWA A;  2KI8 A;  4KDL A;  5DYI A;  2A6H D;  3X2I A;  1R7R A;  4FG2 A;  1TMO A;  1DMR A;  4L48 A;  2E2H A;  3O5A A;  1L8F A;  2WB1 A;  4JP7 A;  2NYA A;  5C1B A;  1E5V A;  2NVX A;  1OA9 A;  1KQG A;  1ZC1 A;  2NAP A;  3GTP A;  2R7Z A;  3HKZ A;  2JIR A;  3CZB A;  3OUG A;  4DMR A;  3GTQ A;  4AON B;  3SUM A;  3GTJ A;  3X2G A;  1E61 A;  3QQ8 A;  1PPY A;  4RV0 A;  3X2L A;  3QQ7 A;  3ML1 A;  3QC8 A;  1N10 A;  3ENG A;  1VC3 B;  1PT0 A;  4AZD A;  4JS7 A;  1Q16 A;  1PYQ A;  4CRY G;  4AYB A;  2PJJ A;  2Y0S A;  2V45 A;  5H4U A;  1IW7 D;  1Y5I A;  2JIQ A;  4FFT A;  1SIW A;  1Y1W A;  1H0H A;  1TWF A;  2JIP A;  1I3Q A;  5T5M D;  2EEO B;  1PQH A;  1E60 A;  1YNN D;  1WCM A;  5FTM A;  3GTK A;  2C45 A;  3X2H A;  2HCZ X;  1S3S A;  2PI8 A;  3TIW A;  4CS0 A;  1CZ4 A;  1UHD A;  1QCS A;  2BH0 A;  4C2M A;  1OA7 A;  3X2K A;  1Y4Z A;  4KO8 A;  2JIO A; 
#chains in the Genus database with same CATH homology
 2KQA A;  4JS7 A;  2GAE A;  3X2N A;  3SUK A;  5GLX A;  3SUJ A;  2AE0 X;  2PJJ A;  4FER A;  3D30 A;  5H4U A;  3X2O A;  3X2M A;  1BW3 A;  4FFT A;  1HD5 A;  3X2I A;  4FG2 A;  3M3G A;  4JJO A;  2PIC A;  4L48 A;  1BW4 A;  4ZM7 A;  3SUL A;  1L8F A;  4JP7 A;  1WC2 A;  5GLY A;  3X2P A;  1OA9 A;  3X2H A;  2HCZ X;  2PI8 A;  2PNW A;  4JCW A;  4ENG A;  3CZB A;  2G6G A;  5GM9 A;  3X2J A;  4JP6 A;  2BH0 A;  2ENG A;  4FG4 A;  3SUM A;  1OA7 A;  3X2G A;  3X2K A;  2G5D A;  3X2L A;  1N10 A;  4AVR A;  3ENG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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