1L8FA

Structure of 20k-endoglucanase from melanocarpus albomyces at 1.8 a
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
ANGQSTRYWDCCKPSCGWRGKGPVNQPVYSCDANFQRIHDFDAVSGCEGGPAFSCADHSPWAINDNLSYGFAATALSGQTEESWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNHFDLNIPGGGVGLFDGCTPQFGGLPGARYGGISSRQECDSFPEPLKPGCQWRFDWFQNADNPSFTFERVQCPEELVARTGCRRHDDGGFA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase
publication title Structure of 20K endoglucanase from Melanocarpus albomyces at 1.8 A resolution.
pubmed doi rcsb
molecule tags Hydrolase
total genus 69
structure length 207
sequence length 207
ec nomenclature ec 3.2.1.4: Cellulase.
pdb deposition date 2002-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 1l8fA00
5GM9A 5GLXA 1HD5A 4FFTA 2ENGA 3X2GA 2PICA 2PI8A 1OA7A 4ZM7A 4FERA 4JS7A 3X2PA 2GAEA 4FG4A 4L48A 4JP6A 3X2IA 1OA9A 4JCWA 2HCZX 3X2LA 3X2OA 2BH0A 3CZBA 2PNWA 3SUJA 3X2MA 2G5DA 1L8FA 5H4UA 2AE0X 3ENGA 1WC2A 3X2KA 1BW4A 2G6GA 4JJOA 3X2HA 3SUMA 3SUKA 3SULA 1BW3A 4JP7A 3D30A 3M3GA 3X2NA 1N10A 4FG2A 2PJJA 3X2JA 4AVRA 4ENGA 5GLYA 2KQAA
chains in the Genus database with same CATH superfamily
2VPXA 1TMOA 3OUGA 5T5MD 1E60A 1WCMA 2ENGA 2PICA 3IR7A 1YLEA 3X2GA 4FERA 3GTPA 3O5AA 1I3QA 4L48A 3HKZA 3HU2A 5FTKA 2DMRA 3H0GA 4JP6A 4JCWA 2JA7A 1ZYRD 2NAPA 2R93A 2PNWA 3X2MA 2VPYA 1S3SA 2JIPA 1WLFA 1E5VA 2VUMA 2AE0X 1Y1WA 1WC2A 1TWCA 1SMYD 1YNJD 2CW0D 1EU1A 2A68D 2PMZA 3QC8A 3QQ8A 5DYGA 1KQFA 1SFOA 3D30A 1SIWA 1KQGA 2R7ZA 1N10A 1PQFA 5FTNA 1R27A 4NOHA 2PJJA 4ENGA 2NVXA 4QIWA 1YNND 1E32A 3CQZA 5FTMA 5FTLA 2JIMA 4AOKB 5GLXA 1CZ5A 1IW7D 2JIOA 2B63A 2PI8A 5FTJA 5T5ID 1H0HA 3HU1A 4D7ZB 3ML1A 1UHDA 3X2IA 1TWFA 5DYIA 1OA9A 2V3VA 1Y4ZA 3SUJA 1Q16A 1R9TA 1H5NA 1E18A 1QCSA 2PJHB 5GLYA 2E2HA 3GTQA 1BW4A 2G6GA 4GA6A 3HU3A 4JJOA 4KODA 3SULA 1BW3A 1CZ4A 1PQEA 3CF2A 4RV0A 1TWHA 1CR5A 2E7ZA 1FDOA 1AA6A 1PQHA 2A6ED 2A69D 2KQAA 1PPYA 1R7RA 3PLXB 2VPZA 1TWAA 2Y0SA 2WB1A 1OA7A 1E61A 4AZDA 3QQ7A 2NVYA 2A6HD 2YU9A 1PYUB 3GTLA 1I50A 1VC3B 5EPPA 1TWGA 3X2LA 1G8JA 3X2OA 2BH0A 2JA5A 3QWZA 2G5DA 4C2MA 1DMSA 4CS0A 3GTMA 1UHEA 1L8FA 3X2HA 3SUMA 2C45A 2BE5D 3SUKA 4GA5A 4JP7A 2YUJA 3M3GA 3X2NA 2KI8A 3IR5A 4FG2A 3TIWA 4AVRA 1PT0A 5GM9A 3GTGA 5GLFA 1G8KA 2O5JD 3GTKA 2EEOB 2NYAA 3FKIA 2E2IA 1HD5A 3IR6A 4FFTA 3DMRA 2JIRA 3GTOA 4CRYG 4ZM7A 1PYQA 3X2PA 4JS7A 3TM7B 4AYBA 2GAEA 4FG4A 4KDIA 5C1BA 2JIQA 4AAYA 1OGYA 5B6CA 4KO8A 1Y5IA 2V45A 2VPWA 2HCZX 3CZBA 1AW8B 2JA6A 1ZC1A 2IV2X 1PT1A 5H4UA 2WAQA 3ENGA 3X2KA 1Y1VA 4KLNA 4AONB 5C18A 4DMRA 1FDIA 1QDNA 4CRZA 2R92A 3X2JA 3GTJA 4KDLA 1DMRA 1K83A
chains in the Genus database with same CATH topology
5GM9A 5GLXA 1HD5A 4FFTA 2ENGA 3X2GA 2PICA 2PI8A 1OA7A 4ZM7A 4FERA 4JS7A 3X2PA 2GAEA 4FG4A 4L48A 4JP6A 3X2IA 1OA9A 4JCWA 2HCZX 3X2LA 3X2OA 2BH0A 3CZBA 2PNWA 3SUJA 3X2MA 2G5DA 1L8FA 5H4UA 2AE0X 3ENGA 1WC2A 3X2KA 1BW4A 2G6GA 4JJOA 3X2HA 3SUMA 3SUKA 3SULA 1BW3A 4JP7A 3D30A 3M3GA 3X2NA 1N10A 4FG2A 2PJJA 3X2JA 4AVRA 4ENGA 5GLYA 2KQAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5GM9 A;  5GLX A;  1HD5 A;  4FFT A;  2ENG A;  3X2G A;  2PIC A;  2PI8 A;  1OA7 A;  4ZM7 A;  4FER A;  4JS7 A;  3X2P A;  2GAE A;  4FG4 A;  4L48 A;  4JP6 A;  3X2I A;  1OA9 A;  4JCW A;  2HCZ X;  3X2L A;  3X2O A;  2BH0 A;  3CZB A;  2PNW A;  3SUJ A;  3X2M A;  2G5D A;  1L8F A;  5H4U A;  2AE0 X;  3ENG A;  1WC2 A;  3X2K A;  1BW4 A;  2G6G A;  4JJO A;  3X2H A;  3SUM A;  3SUK A;  3SUL A;  1BW3 A;  4JP7 A;  3D30 A;  3M3G A;  3X2N A;  1N10 A;  4FG2 A;  2PJJ A;  3X2J A;  4AVR A;  4ENG A;  5GLY A;  2KQA A; 
#chains in the Genus database with same CATH topology
 2VPX A;  1TMO A;  3OUG A;  5T5M D;  1E60 A;  1WCM A;  2ENG A;  2PIC A;  3IR7 A;  1YLE A;  3X2G A;  4FER A;  3GTP A;  3O5A A;  1I3Q A;  4L48 A;  3HKZ A;  3HU2 A;  5FTK A;  2DMR A;  3H0G A;  4JP6 A;  4JCW A;  2JA7 A;  1ZYR D;  2NAP A;  2R93 A;  2PNW A;  3X2M A;  2VPY A;  1S3S A;  2JIP A;  1WLF A;  1E5V A;  2VUM A;  2AE0 X;  1Y1W A;  1WC2 A;  1TWC A;  1SMY D;  1YNJ D;  2CW0 D;  1EU1 A;  2A68 D;  2PMZ A;  3QC8 A;  3QQ8 A;  5DYG A;  1KQF A;  1SFO A;  3D30 A;  1SIW A;  1KQG A;  2R7Z A;  1N10 A;  1PQF A;  5FTN A;  1R27 A;  4NOH A;  2PJJ A;  4ENG A;  2NVX A;  4QIW A;  1YNN D;  1E32 A;  3CQZ A;  5FTM A;  5FTL A;  2JIM A;  4AOK B;  5GLX A;  1CZ5 A;  1IW7 D;  2JIO A;  2B63 A;  2PI8 A;  5FTJ A;  5T5I D;  1H0H A;  3HU1 A;  4D7Z B;  3ML1 A;  1UHD A;  3X2I A;  1TWF A;  5DYI A;  1OA9 A;  2V3V A;  1Y4Z A;  3SUJ A;  1Q16 A;  1R9T A;  1H5N A;  1E18 A;  1QCS A;  2PJH B;  5GLY A;  2E2H A;  3GTQ A;  1BW4 A;  2G6G A;  4GA6 A;  3HU3 A;  4JJO A;  4KOD A;  3SUL A;  1BW3 A;  1CZ4 A;  1PQE A;  3CF2 A;  4RV0 A;  1TWH A;  1CR5 A;  2E7Z A;  1FDO A;  1AA6 A;  1PQH A;  2A6E D;  2A69 D;  2KQA A;  1PPY A;  1R7R A;  3PLX B;  2VPZ A;  1TWA A;  2Y0S A;  2WB1 A;  1OA7 A;  1E61 A;  4AZD A;  3QQ7 A;  2NVY A;  2A6H D;  2YU9 A;  1PYU B;  3GTL A;  1I50 A;  1VC3 B;  5EPP A;  1TWG A;  3X2L A;  1G8J A;  3X2O A;  2BH0 A;  2JA5 A;  3QWZ A;  2G5D A;  4C2M A;  1DMS A;  4CS0 A;  3GTM A;  1UHE A;  1L8F A;  3X2H A;  3SUM A;  2C45 A;  2BE5 D;  3SUK A;  4GA5 A;  4JP7 A;  2YUJ A;  3M3G A;  3X2N A;  2KI8 A;  3IR5 A;  4FG2 A;  3TIW A;  4AVR A;  1PT0 A;  5GM9 A;  3GTG A;  5GLF A;  1G8K A;  2O5J D;  3GTK A;  2EEO B;  2NYA A;  3FKI A;  2E2I A;  1HD5 A;  3IR6 A;  4FFT A;  3DMR A;  2JIR A;  3GTO A;  4CRY G;  4ZM7 A;  1PYQ A;  3X2P A;  4JS7 A;  3TM7 B;  4AYB A;  2GAE A;  4FG4 A;  4KDI A;  5C1B A;  2JIQ A;  4AAY A;  1OGY A;  5B6C A;  4KO8 A;  1Y5I A;  2V45 A;  2VPW A;  2HCZ X;  3CZB A;  1AW8 B;  2JA6 A;  1ZC1 A;  2IV2 X;  1PT1 A;  5H4U A;  2WAQ A;  3ENG A;  3X2K A;  1Y1V A;  4KLN A;  4AON B;  5C18 A;  4DMR A;  1FDI A;  1QDN A;  4CRZ A;  2R92 A;  3X2J A;  3GTJ A;  4KDL A;  1DMR A;  1K83 A; 
#chains in the Genus database with same CATH homology
 5GM9 A;  5GLX A;  1HD5 A;  4FFT A;  2ENG A;  3X2G A;  2PIC A;  2PI8 A;  1OA7 A;  4ZM7 A;  4FER A;  4JS7 A;  3X2P A;  2GAE A;  4FG4 A;  4L48 A;  4JP6 A;  3X2I A;  1OA9 A;  4JCW A;  2HCZ X;  3X2L A;  3X2O A;  2BH0 A;  3CZB A;  2PNW A;  3SUJ A;  3X2M A;  2G5D A;  1L8F A;  5H4U A;  2AE0 X;  3ENG A;  1WC2 A;  3X2K A;  1BW4 A;  2G6G A;  4JJO A;  3X2H A;  3SUM A;  3SUK A;  3SUL A;  1BW3 A;  4JP7 A;  3D30 A;  3M3G A;  3X2N A;  1N10 A;  4FG2 A;  2PJJ A;  3X2J A;  4AVR A;  4ENG A;  5GLY A;  2KQA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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