1L8FA

Structure of 20k-endoglucanase from melanocarpus albomyces at 1.8 a
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
ANGQSTRYWDCCKPSCGWRGKGPVNQPVYSCDANFQRIHDFDAVSGCEGGPAFSCADHSPWAINDNLSYGFAATALSGQTEESWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNHFDLNIPGGGVGLFDGCTPQFGGLPGARYGGISSRQECDSFPEPLKPGCQWRFDWFQNADNPSFTFERVQCPEELVARTGCRRHDDGGFA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
publication title Structure of 20K endoglucanase from Melanocarpus albomyces at 1.8 A resolution.
pubmed doi rcsb
molecule keywords Endoglucanase
total genus 69
structure length 207
sequence length 207
ec nomenclature ec 3.2.1.4: Cellulase.
pdb deposition date 2002-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 1l8fA00
4AVRA 1HD5A 1N10A 2HCZX 2PICA 4FG2A 3X2KA 3SUKA 2BH0A 2PJJA 3X2JA 3X2IA 1L8FA 3SUJA 3CZBA 5GLXA 3SUMA 2PNWA 4ENGA 2PI8A 4JCWA 1OA7A 3ENGA 4L48A 1WC2A 2KQAA 5GM9A 3X2MA 3X2LA 4ZM7A 4JP7A 4FG4A 5GLYA 3M3GA 3X2OA 5H4UA 3SULA 1OA9A 4JS7A 3X2GA 2G5DA 1BW3A 2ENGA 4FERA 3X2HA 3X2PA 2G6GA 1BW4A 4JP6A 2GAEA 3D30A 4JJOA 2AE0X 4FFTA 3X2NA
chains in the Genus database with same CATH superfamily
2IV2X 1N10A 2B63A 5DYGA 3H0GA 4DMRA 1EU1A 3X2KA 2BH0A 3ML1A 2VPXA 1L8FA 2V45A 2KI8A 3CZBA 1Y5IA 2JIQA 5C1BA 3OUGA 1DMRA 4JCWA 1E61A 1OA7A 1I50A 1Y4ZA 1WC2A 2KQAA 5EPPA 3X2MA 2A68D 5FTNA 4AYBA 1E60A 1I3QA 5T5MD 2A6ED 2JA7A 1E18A 3HU3A 3CF2A 4JS7A 3X2GA 2JA6A 1Y1VA 3GTJA 3X2HA 2WB1A 4KDLA 1BW4A 3GTKA 4KLNA 2A6HD 1R27A 2JIOA 1PYUB 1Q16A 2NVYA 2R7ZA 3HU2A 3IR6A 4FG2A 1PYQA 2CW0D 3X2JA 2JA5A 1TWCA 2VPYA 1WCMA 5C18A 2VPWA 1K83A 1UHDA 5T5ID 4ENGA 2DMRA 2NYAA 2PI8A 1G8JA 2JIRA 2VPZA 3ENGA 1KQGA 3FKIA 4CS0A 1VC3B 1YNJD 3HKZA 3X2LA 2R93A 4KODA 1PQHA 4ZM7A 3GTPA 4JP7A 3IR7A 2E7ZA 1YLEA 3GTOA 2YU9A 1IW7D 1QDNA 3PLXB 3M3GA 5H4UA 1H5NA 2A69D 2ENGA 1TWHA 1PQEA 2PJHB 4FERA 3X2PA 4JP6A 4JJOA 1OGYA 1YNND 4FFTA 4AONB 1WLFA 3X2NA 2E2IA 2WAQA 4KO8A 4QIWA 2PICA 3QWZA 4AAYA 5FTLA 4RV0A 2E2HA 3SUKA 1ZYRD 3GTMA 2JIMA 3O5AA 4AOKB 3IR5A 2PNWA 1PPYA 3GTQA 2NVXA 3TIWA 4L48A 4CRZA 2O5JD 5GM9A 1CZ4A 2VUMA 5FTMA 2Y0SA 2BE5D 5FTKA 1E32A 3GTLA 4FG4A 2V3VA 5B6CA 1TWGA 5GLYA 1H0HA 3SULA 2NAPA 1PQFA 3CQZA 1R9TA 4D7ZB 1SMYD 2EEOB 3TM7B 3D30A 5GLFA 2JIPA 2YUJA 3HU1A 4GA6A 3QC8A 4AVRA 1HD5A 2HCZX 3QQ7A 4KDIA 1AA6A 1E5VA 5DYIA 5FTJA 2PJJA 3X2IA 3SUJA 4AZDA 2R92A 5GLXA 3SUMA 1AW8B 1QCSA 1CZ5A 1S3SA 1ZC1A 1KQFA 3DMRA 1TMOA 1DMSA 4C2MA 2C45A 1CR5A 1G8KA 4NOHA 1SFOA 1FDOA 2PMZA 1R7RA 3X2OA 1TWAA 1OA9A 3QQ8A 2G5DA 1PT0A 1BW3A 3GTGA 1TWFA 1FDIA 2G6GA 4CRYG 2GAEA 1Y1WA 1PT1A 4GA5A 2AE0X 1SIWA 1UHEA
chains in the Genus database with same CATH topology
4AVRA 1HD5A 1N10A 2HCZX 2PICA 4FG2A 3X2KA 3SUKA 2BH0A 2PJJA 3X2JA 3X2IA 1L8FA 3SUJA 3CZBA 5GLXA 3SUMA 2PNWA 4ENGA 2PI8A 4JCWA 1OA7A 3ENGA 4L48A 1WC2A 2KQAA 5GM9A 3X2MA 3X2LA 4ZM7A 4JP7A 4FG4A 5GLYA 3M3GA 3X2OA 5H4UA 3SULA 1OA9A 4JS7A 3X2GA 2G5DA 1BW3A 2ENGA 4FERA 3X2HA 3X2PA 2G6GA 1BW4A 4JP6A 2GAEA 3D30A 4JJOA 2AE0X 4FFTA 3X2NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AVR A;  1HD5 A;  1N10 A;  2HCZ X;  2PIC A;  4FG2 A;  3X2K A;  3SUK A;  2BH0 A;  2PJJ A;  3X2J A;  3X2I A;  1L8F A;  3SUJ A;  3CZB A;  5GLX A;  3SUM A;  2PNW A;  4ENG A;  2PI8 A;  4JCW A;  1OA7 A;  3ENG A;  4L48 A;  1WC2 A;  2KQA A;  5GM9 A;  3X2M A;  3X2L A;  4ZM7 A;  4JP7 A;  4FG4 A;  5GLY A;  3M3G A;  3X2O A;  5H4U A;  3SUL A;  1OA9 A;  4JS7 A;  3X2G A;  2G5D A;  1BW3 A;  2ENG A;  4FER A;  3X2H A;  3X2P A;  2G6G A;  1BW4 A;  4JP6 A;  2GAE A;  3D30 A;  4JJO A;  2AE0 X;  4FFT A;  3X2N A; 
#chains in the Genus database with same CATH topology
 2IV2 X;  1N10 A;  2B63 A;  5DYG A;  3H0G A;  4DMR A;  1EU1 A;  3X2K A;  2BH0 A;  3ML1 A;  2VPX A;  1L8F A;  2V45 A;  2KI8 A;  3CZB A;  1Y5I A;  2JIQ A;  5C1B A;  3OUG A;  1DMR A;  4JCW A;  1E61 A;  1OA7 A;  1I50 A;  1Y4Z A;  1WC2 A;  2KQA A;  5EPP A;  3X2M A;  2A68 D;  5FTN A;  4AYB A;  1E60 A;  1I3Q A;  5T5M D;  2A6E D;  2JA7 A;  1E18 A;  3HU3 A;  3CF2 A;  4JS7 A;  3X2G A;  2JA6 A;  1Y1V A;  3GTJ A;  3X2H A;  2WB1 A;  4KDL A;  1BW4 A;  3GTK A;  4KLN A;  2A6H D;  1R27 A;  2JIO A;  1PYU B;  1Q16 A;  2NVY A;  2R7Z A;  3HU2 A;  3IR6 A;  4FG2 A;  1PYQ A;  2CW0 D;  3X2J A;  2JA5 A;  1TWC A;  2VPY A;  1WCM A;  5C18 A;  2VPW A;  1K83 A;  1UHD A;  5T5I D;  4ENG A;  2DMR A;  2NYA A;  2PI8 A;  1G8J A;  2JIR A;  2VPZ A;  3ENG A;  1KQG A;  3FKI A;  4CS0 A;  1VC3 B;  1YNJ D;  3HKZ A;  3X2L A;  2R93 A;  4KOD A;  1PQH A;  4ZM7 A;  3GTP A;  4JP7 A;  3IR7 A;  2E7Z A;  1YLE A;  3GTO A;  2YU9 A;  1IW7 D;  1QDN A;  3PLX B;  3M3G A;  5H4U A;  1H5N A;  2A69 D;  2ENG A;  1TWH A;  1PQE A;  2PJH B;  4FER A;  3X2P A;  4JP6 A;  4JJO A;  1OGY A;  1YNN D;  4FFT A;  4AON B;  1WLF A;  3X2N A;  2E2I A;  2WAQ A;  4KO8 A;  4QIW A;  2PIC A;  3QWZ A;  4AAY A;  5FTL A;  4RV0 A;  2E2H A;  3SUK A;  1ZYR D;  3GTM A;  2JIM A;  3O5A A;  4AOK B;  3IR5 A;  2PNW A;  1PPY A;  3GTQ A;  2NVX A;  3TIW A;  4L48 A;  4CRZ A;  2O5J D;  5GM9 A;  1CZ4 A;  2VUM A;  5FTM A;  2Y0S A;  2BE5 D;  5FTK A;  1E32 A;  3GTL A;  4FG4 A;  2V3V A;  5B6C A;  1TWG A;  5GLY A;  1H0H A;  3SUL A;  2NAP A;  1PQF A;  3CQZ A;  1R9T A;  4D7Z B;  1SMY D;  2EEO B;  3TM7 B;  3D30 A;  5GLF A;  2JIP A;  2YUJ A;  3HU1 A;  4GA6 A;  3QC8 A;  4AVR A;  1HD5 A;  2HCZ X;  3QQ7 A;  4KDI A;  1AA6 A;  1E5V A;  5DYI A;  5FTJ A;  2PJJ A;  3X2I A;  3SUJ A;  4AZD A;  2R92 A;  5GLX A;  3SUM A;  1AW8 B;  1QCS A;  1CZ5 A;  1S3S A;  1ZC1 A;  1KQF A;  3DMR A;  1TMO A;  1DMS A;  4C2M A;  2C45 A;  1CR5 A;  1G8K A;  4NOH A;  1SFO A;  1FDO A;  2PMZ A;  1R7R A;  3X2O A;  1TWA A;  1OA9 A;  3QQ8 A;  2G5D A;  1PT0 A;  1BW3 A;  3GTG A;  1TWF A;  1FDI A;  2G6G A;  4CRY G;  2GAE A;  1Y1W A;  1PT1 A;  4GA5 A;  2AE0 X;  1SIW A;  1UHE A; 
#chains in the Genus database with same CATH homology
 4AVR A;  1HD5 A;  1N10 A;  2HCZ X;  2PIC A;  4FG2 A;  3X2K A;  3SUK A;  2BH0 A;  2PJJ A;  3X2J A;  3X2I A;  1L8F A;  3SUJ A;  3CZB A;  5GLX A;  3SUM A;  2PNW A;  4ENG A;  2PI8 A;  4JCW A;  1OA7 A;  3ENG A;  4L48 A;  1WC2 A;  2KQA A;  5GM9 A;  3X2M A;  3X2L A;  4ZM7 A;  4JP7 A;  4FG4 A;  5GLY A;  3M3G A;  3X2O A;  5H4U A;  3SUL A;  1OA9 A;  4JS7 A;  3X2G A;  2G5D A;  1BW3 A;  2ENG A;  4FER A;  3X2H A;  3X2P A;  2G6G A;  1BW4 A;  4JP6 A;  2GAE A;  3D30 A;  4JJO A;  2AE0 X;  4FFT A;  3X2N A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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