1L8FA

Structure of 20k-endoglucanase from melanocarpus albomyces at 1.8 a
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
ANGQSTRYWDCCKPSCGWRGKGPVNQPVYSCDANFQRIHDFDAVSGCEGGPAFSCADHSPWAINDNLSYGFAATALSGQTEESWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNHFDLNIPGGGVGLFDGCTPQFGGLPGARYGGISSRQECDSFPEPLKPGCQWRFDWFQNADNPSFTFERVQCPEELVARTGCRRHDDGGFA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase
publication title Structure of 20K endoglucanase from Melanocarpus albomyces at 1.8 A resolution.
pubmed doi rcsb
molecule tags Hydrolase
total genus 69
structure length 207
sequence length 207
ec nomenclature ec 3.2.1.4: Cellulase.
pdb deposition date 2002-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 1l8fA00
5GM9A 4JS7A 4FG4A 5H4UA 3X2OA 4JP7A 1N10A 1OA9A 2PJJA 1BW3A 2KQAA 1BW4A 2G6GA 2ENGA 1HD5A 4JJOA 1OA7A 3X2KA 3X2NA 3CZBA 4JP6A 3X2LA 3SUJA 4ENGA 5GLYA 3SUKA 4JCWA 1L8FA 3X2GA 3SULA 4FFTA 3SUMA 4FERA 3M3GA 2GAEA 4AVRA 4ZM7A 2AE0X 1WC2A 2BH0A 3X2JA 2G5DA 3ENGA 2PI8A 3X2PA 3X2HA 5GLXA 3X2IA 4L48A 2HCZX 3D30A 4FG2A 2PNWA 2PICA 3X2MA
chains in the Genus database with same CATH superfamily
4JS7A 2VPZA 1VC3B 4AOKB 1OGYA 1TWAA 3HU3A 3CZBA 4JP6A 1KQFA 3H0GA 1PYUB 5GLYA 2YUJA 1UHDA 1L8FA 4JCWA 3X2GA 5C18A 1AW8B 2V45A 2B63A 4FFTA 3QQ8A 4KDIA 3SUMA 1H0HA 5EPPA 4ZM7A 1EU1A 1FDOA 2VPYA 2AE0X 3GTPA 3X2JA 3HKZA 2KI8A 3GTMA 1G8KA 4CS0A 1PQFA 1TWHA 1OA7A 1G8JA 2JIOA 2NVXA 1PPYA 1N10A 1BW3A 2JIPA 3ML1A 1K83A 1SFOA 4AYBA 4CRYG 4JJOA 5FTNA 4AONB 1PT1A 3SUJA 1CZ4A 1R9TA 2PJHB 2PMZA 2A69D 4KLNA 3SULA 2R93A 3TM7B 1Q16A 2NYAA 1E18A 2GAEA 2WAQA 4AVRA 1E60A 1YNJD 2A6ED 1I50A 1E32A 3ENGA 3PLXB 5T5ID 2VPXA 2JA7A 1KQGA 3GTQA 3GTLA 3X2IA 3QC8A 1CR5A 4NOHA 2Y0SA 4AAYA 4FG2A 3D30A 3HU1A 2VUMA 1Y1VA 1Y4ZA 2R92A 5H4UA 2EEOB 2WB1A 4JP7A 1SIWA 2YU9A 3QWZA 1OA9A 5FTJA 1PT0A 4GA6A 5T5MD 2KQAA 4KO8A 4KDLA 5GLFA 5B6CA 1YNND 1DMRA 1QCSA 3X2LA 3IR6A 4ENGA 1DMSA 3FKIA 2O5JD 2E2HA 4D7ZB 1PQEA 2C45A 4C2MA 3OUGA 5C1BA 2A6HD 3DMRA 4FERA 4DMRA 2E2IA 1Y5IA 1WLFA 3GTOA 1WC2A 2BH0A 2BE5D 2G5DA 3X2PA 1AA6A 2JA6A 1UHEA 3CQZA 2E7ZA 1ZYRD 1PQHA 4RV0A 5GLXA 5DYIA 1H5NA 4AZDA 1TWGA 2NAPA 2CW0D 4CRZA 1I3QA 1IW7D 2PNWA 2VPWA 2R7ZA 5DYGA 2PICA 3X2MA 3O5AA 5GM9A 4FG4A 3X2OA 2NVYA 2PJJA 2JIMA 2A68D 1TWCA 1FDIA 1TMOA 2G6GA 2V3VA 3GTJA 1BW4A 2ENGA 1HD5A 3X2KA 5FTLA 1YLEA 3X2NA 1SMYD 1CZ5A 1E61A 1PYQA 3IR5A 3SUKA 1S3SA 4KODA 3IR7A 1E5VA 1WCMA 2DMRA 2JIQA 3M3GA 3HU2A 3CF2A 3QQ7A 5FTKA 5FTMA 2JA5A 4GA5A 1R7RA 2PI8A 3TIWA 3X2HA 3GTGA 1TWFA 2JIRA 4L48A 1R27A 2HCZX 1ZC1A 1QDNA 3GTKA 2IV2X 1Y1WA 4QIWA
chains in the Genus database with same CATH topology
5GM9A 4JS7A 4FG4A 5H4UA 3X2OA 4JP7A 1N10A 1OA9A 2PJJA 1BW3A 2KQAA 1BW4A 2G6GA 2ENGA 1HD5A 4JJOA 1OA7A 3X2KA 3X2NA 3CZBA 4JP6A 3X2LA 3SUJA 4ENGA 5GLYA 3SUKA 4JCWA 1L8FA 3X2GA 3SULA 4FFTA 3SUMA 4FERA 3M3GA 2GAEA 4AVRA 4ZM7A 2AE0X 1WC2A 2BH0A 3X2JA 2G5DA 3ENGA 2PI8A 3X2PA 3X2HA 5GLXA 3X2IA 4L48A 2HCZX 3D30A 4FG2A 2PNWA 2PICA 3X2MA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5GM9 A;  4JS7 A;  4FG4 A;  5H4U A;  3X2O A;  4JP7 A;  1N10 A;  1OA9 A;  2PJJ A;  1BW3 A;  2KQA A;  1BW4 A;  2G6G A;  2ENG A;  1HD5 A;  4JJO A;  1OA7 A;  3X2K A;  3X2N A;  3CZB A;  4JP6 A;  3X2L A;  3SUJ A;  4ENG A;  5GLY A;  3SUK A;  4JCW A;  1L8F A;  3X2G A;  3SUL A;  4FFT A;  3SUM A;  4FER A;  3M3G A;  2GAE A;  4AVR A;  4ZM7 A;  2AE0 X;  1WC2 A;  2BH0 A;  3X2J A;  2G5D A;  3ENG A;  2PI8 A;  3X2P A;  3X2H A;  5GLX A;  3X2I A;  4L48 A;  2HCZ X;  3D30 A;  4FG2 A;  2PNW A;  2PIC A;  3X2M A; 
#chains in the Genus database with same CATH topology
 4JS7 A;  2VPZ A;  1VC3 B;  4AOK B;  1OGY A;  1TWA A;  3HU3 A;  3CZB A;  4JP6 A;  1KQF A;  3H0G A;  1PYU B;  5GLY A;  2YUJ A;  1UHD A;  1L8F A;  4JCW A;  3X2G A;  5C18 A;  1AW8 B;  2V45 A;  2B63 A;  4FFT A;  3QQ8 A;  4KDI A;  3SUM A;  1H0H A;  5EPP A;  4ZM7 A;  1EU1 A;  1FDO A;  2VPY A;  2AE0 X;  3GTP A;  3X2J A;  3HKZ A;  2KI8 A;  3GTM A;  1G8K A;  4CS0 A;  1PQF A;  1TWH A;  1OA7 A;  1G8J A;  2JIO A;  2NVX A;  1PPY A;  1N10 A;  1BW3 A;  2JIP A;  3ML1 A;  1K83 A;  1SFO A;  4AYB A;  4CRY G;  4JJO A;  5FTN A;  4AON B;  1PT1 A;  3SUJ A;  1CZ4 A;  1R9T A;  2PJH B;  2PMZ A;  2A69 D;  4KLN A;  3SUL A;  2R93 A;  3TM7 B;  1Q16 A;  2NYA A;  1E18 A;  2GAE A;  2WAQ A;  4AVR A;  1E60 A;  1YNJ D;  2A6E D;  1I50 A;  1E32 A;  3ENG A;  3PLX B;  5T5I D;  2VPX A;  2JA7 A;  1KQG A;  3GTQ A;  3GTL A;  3X2I A;  3QC8 A;  1CR5 A;  4NOH A;  2Y0S A;  4AAY A;  4FG2 A;  3D30 A;  3HU1 A;  2VUM A;  1Y1V A;  1Y4Z A;  2R92 A;  5H4U A;  2EEO B;  2WB1 A;  4JP7 A;  1SIW A;  2YU9 A;  3QWZ A;  1OA9 A;  5FTJ A;  1PT0 A;  4GA6 A;  5T5M D;  2KQA A;  4KO8 A;  4KDL A;  5GLF A;  5B6C A;  1YNN D;  1DMR A;  1QCS A;  3X2L A;  3IR6 A;  4ENG A;  1DMS A;  3FKI A;  2O5J D;  2E2H A;  4D7Z B;  1PQE A;  2C45 A;  4C2M A;  3OUG A;  5C1B A;  2A6H D;  3DMR A;  4FER A;  4DMR A;  2E2I A;  1Y5I A;  1WLF A;  3GTO A;  1WC2 A;  2BH0 A;  2BE5 D;  2G5D A;  3X2P A;  1AA6 A;  2JA6 A;  1UHE A;  3CQZ A;  2E7Z A;  1ZYR D;  1PQH A;  4RV0 A;  5GLX A;  5DYI A;  1H5N A;  4AZD A;  1TWG A;  2NAP A;  2CW0 D;  4CRZ A;  1I3Q A;  1IW7 D;  2PNW A;  2VPW A;  2R7Z A;  5DYG A;  2PIC A;  3X2M A;  3O5A A;  5GM9 A;  4FG4 A;  3X2O A;  2NVY A;  2PJJ A;  2JIM A;  2A68 D;  1TWC A;  1FDI A;  1TMO A;  2G6G A;  2V3V A;  3GTJ A;  1BW4 A;  2ENG A;  1HD5 A;  3X2K A;  5FTL A;  1YLE A;  3X2N A;  1SMY D;  1CZ5 A;  1E61 A;  1PYQ A;  3IR5 A;  3SUK A;  1S3S A;  4KOD A;  3IR7 A;  1E5V A;  1WCM A;  2DMR A;  2JIQ A;  3M3G A;  3HU2 A;  3CF2 A;  3QQ7 A;  5FTK A;  5FTM A;  2JA5 A;  4GA5 A;  1R7R A;  2PI8 A;  3TIW A;  3X2H A;  3GTG A;  1TWF A;  2JIR A;  4L48 A;  1R27 A;  2HCZ X;  1ZC1 A;  1QDN A;  3GTK A;  2IV2 X;  1Y1W A;  4QIW A; 
#chains in the Genus database with same CATH homology
 5GM9 A;  4JS7 A;  4FG4 A;  5H4U A;  3X2O A;  4JP7 A;  1N10 A;  1OA9 A;  2PJJ A;  1BW3 A;  2KQA A;  1BW4 A;  2G6G A;  2ENG A;  1HD5 A;  4JJO A;  1OA7 A;  3X2K A;  3X2N A;  3CZB A;  4JP6 A;  3X2L A;  3SUJ A;  4ENG A;  5GLY A;  3SUK A;  4JCW A;  1L8F A;  3X2G A;  3SUL A;  4FFT A;  3SUM A;  4FER A;  3M3G A;  2GAE A;  4AVR A;  4ZM7 A;  2AE0 X;  1WC2 A;  2BH0 A;  3X2J A;  2G5D A;  3ENG A;  2PI8 A;  3X2P A;  3X2H A;  5GLX A;  3X2I A;  4L48 A;  2HCZ X;  3D30 A;  4FG2 A;  2PNW A;  2PIC A;  3X2M A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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