3X2IA

X-ray structure of pccel45a n92d apo form at 298k.
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2iA00
2G6GA 4ZM7A 4FG2A 1HD5A 2BH0A 3X2GA 1OA7A 2ENGA 3X2MA 3X2PA 2PICA 4JCWA 2AE0X 4JP7A 2PI8A 3SUJA 5GLXA 3X2NA 5GLYA 2HCZX 3X2KA 1BW3A 4JJOA 3X2JA 3CZBA 1L8FA 3D30A 3SUKA 1OA9A 4JP6A 3SUMA 4FERA 3X2LA 3X2HA 3M3GA 2GAEA 3X2IA 3X2OA 1BW4A 2KQAA 5GM9A 2PJJA 4L48A 1N10A 3SULA 4ENGA 4FG4A 3ENGA 4JS7A 4AVRA 1WC2A 2G5DA 2PNWA 5H4UA 4FFTA
chains in the Genus database with same CATH superfamily
3QC8A 1ZC1A 3QQ7A 1PYQA 2EEOB 3ML1A 1S3SA 2R7ZA 1H0HA 1OGYA 3IR5A 3H0GA 1G8KA 2YUJA 3SUJA 3GTJA 3X2KA 4C2MA 2HCZX 3HU3A 2WB1A 2E2HA 5FTNA 5T5MD 2JA6A 1R27A 3GTGA 1Q16A 1CR5A 1QCSA 3X2HA 4RV0A 1QDNA 2GAEA 1R7RA 4KDLA 1SFOA 1PT0A 4KDIA 1I50A 2PJJA 2A6ED 1YLEA 4GA5A 3SULA 4JS7A 2G5DA 2A68D 2JIRA 2NYAA 2PMZA 2VPYA 5FTLA 2IV2X 4FFTA 2PJHB 2R93A 4FG2A 4D7ZB 1PQHA 3HU1A 1OA7A 2ENGA 3QWZA 3X2PA 5FTMA 3GTMA 1FDIA 4JCWA 4AAYA 4JP7A 1FDOA 2V3VA 4JJOA 5EPPA 1DMRA 1UHEA 3GTKA 2E7ZA 1PYUB 2BE5D 2NAPA 1PQFA 2VPZA 3HKZA 2YU9A 1OA9A 4FERA 1EU1A 2KI8A 5C1BA 2JIQA 2NVYA 2VUMA 4QIWA 4CRYG 4AZDA 5GM9A 3CQZA 5T5ID 1YNND 2VPWA 2JIMA 1K83A 3QQ8A 4KLNA 2JA7A 1AA6A 1CZ5A 4AYBA 1TMOA 4ZM7A 1Y5IA 2WAQA 1HD5A 2BH0A 3X2GA 3X2MA 2DMRA 1SIWA 3TM7B 5B6CA 2JA5A 1TWHA 2PICA 2E2IA 1E5VA 3TIWA 1PT1A 1Y4ZA 1BW3A 1Y1WA 3GTQA 1AW8B 1UHDA 1R9TA 2B63A 1PPYA 2A6HD 3CZBA 3OUGA 1YNJD 3IR7A 1VC3B 3X2LA 3SUMA 2V45A 4CS0A 3FKIA 3M3GA 1H5NA 1G8JA 2O5JD 1BW4A 1SMYD 2KQAA 1TWAA 4KODA 4L48A 1ZYRD 1WLFA 4KO8A 1IW7D 3ENGA 1E60A 4CRZA 2A69D 2G6GA 2C45A 2R92A 3PLXB 3IR6A 1KQGA 1DMSA 5FTJA 4NOHA 5GLFA 3HU2A 3O5AA 2AE0X 3GTPA 2PI8A 3X2NA 5GLXA 2CW0D 5GLYA 1E32A 1E18A 4GA6A 3X2JA 3GTOA 1WCMA 3CF2A 1TWFA 1E61A 1L8FA 2Y0SA 3DMRA 3D30A 4AOKB 4AONB 5DYIA 2NVXA 3SUKA 5C18A 4DMRA 1I3QA 4JP6A 1KQFA 1CZ4A 3X2IA 2JIOA 3X2OA 1Y1VA 1N10A 2JIPA 5DYGA 1TWGA 1PQEA 4FG4A 2VPXA 4AVRA 4ENGA 1WC2A 2PNWA 5H4UA 1TWCA 3GTLA 5FTKA
chains in the Genus database with same CATH topology
2G6GA 4ZM7A 4FG2A 1HD5A 2BH0A 3X2GA 1OA7A 2ENGA 3X2MA 3X2PA 2PICA 4JCWA 2AE0X 4JP7A 2PI8A 3SUJA 5GLXA 3X2NA 5GLYA 2HCZX 3X2KA 1BW3A 4JJOA 3X2JA 3CZBA 1L8FA 3D30A 3SUKA 1OA9A 4JP6A 3SUMA 4FERA 3X2LA 3X2HA 3M3GA 2GAEA 3X2IA 3X2OA 1BW4A 2KQAA 5GM9A 2PJJA 4L48A 1N10A 3SULA 4ENGA 4FG4A 3ENGA 4JS7A 4AVRA 1WC2A 2G5DA 2PNWA 5H4UA 4FFTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2G6G A;  4ZM7 A;  4FG2 A;  1HD5 A;  2BH0 A;  3X2G A;  1OA7 A;  2ENG A;  3X2M A;  3X2P A;  2PIC A;  4JCW A;  2AE0 X;  4JP7 A;  2PI8 A;  3SUJ A;  5GLX A;  3X2N A;  5GLY A;  2HCZ X;  3X2K A;  1BW3 A;  4JJO A;  3X2J A;  3CZB A;  1L8F A;  3D30 A;  3SUK A;  1OA9 A;  4JP6 A;  3SUM A;  4FER A;  3X2L A;  3X2H A;  3M3G A;  2GAE A;  3X2I A;  3X2O A;  1BW4 A;  2KQA A;  5GM9 A;  2PJJ A;  4L48 A;  1N10 A;  3SUL A;  4ENG A;  4FG4 A;  3ENG A;  4JS7 A;  4AVR A;  1WC2 A;  2G5D A;  2PNW A;  5H4U A;  4FFT A; 
#chains in the Genus database with same CATH topology
 3QC8 A;  1ZC1 A;  3QQ7 A;  1PYQ A;  2EEO B;  3ML1 A;  1S3S A;  2R7Z A;  1H0H A;  1OGY A;  3IR5 A;  3H0G A;  1G8K A;  2YUJ A;  3SUJ A;  3GTJ A;  3X2K A;  4C2M A;  2HCZ X;  3HU3 A;  2WB1 A;  2E2H A;  5FTN A;  5T5M D;  2JA6 A;  1R27 A;  3GTG A;  1Q16 A;  1CR5 A;  1QCS A;  3X2H A;  4RV0 A;  1QDN A;  2GAE A;  1R7R A;  4KDL A;  1SFO A;  1PT0 A;  4KDI A;  1I50 A;  2PJJ A;  2A6E D;  1YLE A;  4GA5 A;  3SUL A;  4JS7 A;  2G5D A;  2A68 D;  2JIR A;  2NYA A;  2PMZ A;  2VPY A;  5FTL A;  2IV2 X;  4FFT A;  2PJH B;  2R93 A;  4FG2 A;  4D7Z B;  1PQH A;  3HU1 A;  1OA7 A;  2ENG A;  3QWZ A;  3X2P A;  5FTM A;  3GTM A;  1FDI A;  4JCW A;  4AAY A;  4JP7 A;  1FDO A;  2V3V A;  4JJO A;  5EPP A;  1DMR A;  1UHE A;  3GTK A;  2E7Z A;  1PYU B;  2BE5 D;  2NAP A;  1PQF A;  2VPZ A;  3HKZ A;  2YU9 A;  1OA9 A;  4FER A;  1EU1 A;  2KI8 A;  5C1B A;  2JIQ A;  2NVY A;  2VUM A;  4QIW A;  4CRY G;  4AZD A;  5GM9 A;  3CQZ A;  5T5I D;  1YNN D;  2VPW A;  2JIM A;  1K83 A;  3QQ8 A;  4KLN A;  2JA7 A;  1AA6 A;  1CZ5 A;  4AYB A;  1TMO A;  4ZM7 A;  1Y5I A;  2WAQ A;  1HD5 A;  2BH0 A;  3X2G A;  3X2M A;  2DMR A;  1SIW A;  3TM7 B;  5B6C A;  2JA5 A;  1TWH A;  2PIC A;  2E2I A;  1E5V A;  3TIW A;  1PT1 A;  1Y4Z A;  1BW3 A;  1Y1W A;  3GTQ A;  1AW8 B;  1UHD A;  1R9T A;  2B63 A;  1PPY A;  2A6H D;  3CZB A;  3OUG A;  1YNJ D;  3IR7 A;  1VC3 B;  3X2L A;  3SUM A;  2V45 A;  4CS0 A;  3FKI A;  3M3G A;  1H5N A;  1G8J A;  2O5J D;  1BW4 A;  1SMY D;  2KQA A;  1TWA A;  4KOD A;  4L48 A;  1ZYR D;  1WLF A;  4KO8 A;  1IW7 D;  3ENG A;  1E60 A;  4CRZ A;  2A69 D;  2G6G A;  2C45 A;  2R92 A;  3PLX B;  3IR6 A;  1KQG A;  1DMS A;  5FTJ A;  4NOH A;  5GLF A;  3HU2 A;  3O5A A;  2AE0 X;  3GTP A;  2PI8 A;  3X2N A;  5GLX A;  2CW0 D;  5GLY A;  1E32 A;  1E18 A;  4GA6 A;  3X2J A;  3GTO A;  1WCM A;  3CF2 A;  1TWF A;  1E61 A;  1L8F A;  2Y0S A;  3DMR A;  3D30 A;  4AOK B;  4AON B;  5DYI A;  2NVX A;  3SUK A;  5C18 A;  4DMR A;  1I3Q A;  4JP6 A;  1KQF A;  1CZ4 A;  3X2I A;  2JIO A;  3X2O A;  1Y1V A;  1N10 A;  2JIP A;  5DYG A;  1TWG A;  1PQE A;  4FG4 A;  2VPX A;  4AVR A;  4ENG A;  1WC2 A;  2PNW A;  5H4U A;  1TWC A;  3GTL A;  5FTK A; 
#chains in the Genus database with same CATH homology
 2G6G A;  4ZM7 A;  4FG2 A;  1HD5 A;  2BH0 A;  3X2G A;  1OA7 A;  2ENG A;  3X2M A;  3X2P A;  2PIC A;  4JCW A;  2AE0 X;  4JP7 A;  2PI8 A;  3SUJ A;  5GLX A;  3X2N A;  5GLY A;  2HCZ X;  3X2K A;  1BW3 A;  4JJO A;  3X2J A;  3CZB A;  1L8F A;  3D30 A;  3SUK A;  1OA9 A;  4JP6 A;  3SUM A;  4FER A;  3X2L A;  3X2H A;  3M3G A;  2GAE A;  3X2I A;  3X2O A;  1BW4 A;  2KQA A;  5GM9 A;  2PJJ A;  4L48 A;  1N10 A;  3SUL A;  4ENG A;  4FG4 A;  3ENG A;  4JS7 A;  4AVR A;  1WC2 A;  2G5D A;  2PNW A;  5H4U A;  4FFT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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