2C45A

Native precursor of pyruvoyl dependent aspartate decarboxylase
Total Genus 27
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
113
structure length
113
Chain Sequence
b'MLRTMLKSKIHRATVTCADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVHPGDLVILIAYATMDDARARTYQPRIVFVDAYNK'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Aspartate 1-decarboxylase
molecule tags Lyase
source organism Mycobacterium tuberculosis
publication title Crystal structure of uncleaved L-aspartate-alpha-decarboxylase from Mycobacterium tuberculosis.
pubmed doi rcsb
total genus 27
structure length 113
sequence length 113
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 4.1.1.11: Aspartate 1-decarboxylase.
pdb deposition date 2005-10-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02261 Asp_decarbox Aspartate decarboxylase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.20 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 2c45A00
4D7ZB 2R93A 2PMZA 1TWGA 5FTKA 4AAYA 1AA6A 1Q16A 2Y0SA 3HU3A 3QQ7A 1KQGA 2R92A 1TWFA 1DMRA 1E61A 2EEOB 1R27A 1E18A 3QWZA 1PQFA 3CF2A 3QQ8A 1PT1A 1FDIA 4KLNA 3GTKA 3GTGA 1PPYA 1TMOA 5B6CA 2PJHB 5FTJA 4CRYG 1G8JA 2JIRA 4KDLA 2V3VA 1TWHA 2JIMA 4AZDA 2JA7A 3HU2A 1K83A 3GTMA 1S3SA 1TWCA 2B63A 4CRZA 1SFOA 5FTNA 1YLEA 5DYGA 2JA5A 1CZ4A 1CZ5A 4KODA 4CS0A 1PYQA 3GTPA 2WB1A 3GTJA 2NAPA 5EPPA 2NVXA 2JIOA 3GTOA 2E7ZA 5GLFA 1UHDA 2NVYA 3GTQA 5FTLA 4AONB 2DMRA 1R7RA 1IW7D 3IR7A 2VPYA 3FKIA 2VPWA 4QIWA 1TWAA 1SIWA 5FTMA 4KO8A 2C45A 1DMSA 2R7ZA 1UHEA 2KI8A 3QC8A 1PQEA 2IV2X 1VC3B 1I50A 1KQFA 3OUGA 1CR5A 1Y1WA 1PQHA 3IR6A 1FDOA 1WLFA 2V45A 1EU1A 4RV0A 1WCMA 4AOKB 3TM7B 1Y4ZA 3IR5A 2VPZA 3HKZA 1AW8B 4KDIA 3DMRA 3CQZA 5C1BA 1Y1VA 1E32A 4GA5A 4AYBA 3TIWA 1G8KA 3HU1A 1H5NA 1Y5IA 2VPXA 3PLXB 1PT0A 2E2IA 2WAQA 4GA6A 5C18A 1H0HA 1E60A 2JIQA 1QDNA 3O5AA 3H0GA 3ML1A 1I3QA 1OGYA 1R9TA 5T5MD 3GTLA 2NYAA 1PYUB 2JIPA 2VUMA 1E5VA 4C2MA 5DYIA 5T5ID 2YU9A 2JA6A 1QCSA 2E2HA 4DMRA
chains in the Genus database with same CATH superfamily
3M3GA 2ENGA 4D7ZB 2R93A 2PMZA 2KQAA 1TWGA 3D30A 1WC2A 4JP6A 5FTKA 1Q16A 4AAYA 2Y0SA 3X2KA 1AA6A 3HU3A 3QQ7A 1KQGA 2R92A 3X2NA 1TWFA 1DMRA 1E61A 2EEOB 1R27A 1E18A 3QWZA 1PQFA 4JJOA 3CF2A 3QQ8A 1PT1A 4JP7A 1FDIA 3CZBA 4KLNA 3GTKA 3GTGA 1PPYA 1TMOA 1ZYRD 4FG2A 5B6CA 2PJHB 2A68D 5FTJA 1G8JA 2JIRA 4CRYG 1N10A 4KDLA 2V3VA 1TWHA 2JIMA 4AZDA 2O5JD 2JA7A 3SULA 3HU2A 2G5DA 1K83A 3GTMA 1S3SA 1TWCA 1ZC1A 4CRZA 2B63A 1SMYD 2BE5D 1SFOA 5FTNA 1YLEA 1HD5A 5DYGA 2JA5A 2PICA 2AE0X 1CZ4A 1CZ5A 4KODA 4ENGA 2GAEA 1OA7A 4CS0A 1PYQA 3GTPA 1BW4A 2A6HD 2WB1A 3GTJA 2NAPA 5EPPA 2A69D 2NVXA 2JIOA 3GTOA 3X2MA 2E7ZA 5GLFA 5GM9A 5GLYA 1UHDA 2NVYA 2BH0A 4NOHA 3GTQA 5FTLA 4AONB 2DMRA 1R7RA 1IW7D 3X2IA 3ENGA 3IR7A 2VPYA 3FKIA 1YNJD 2PI8A 3SUMA 2VPWA 4QIWA 4AVRA 2PJJA 1TWAA 1SIWA 1OA9A 5FTMA 4KO8A 2C45A 1DMSA 2R7ZA 1UHEA 2KI8A 3QC8A 1PQEA 2IV2X 1VC3B 4FG4A 5H4UA 1I50A 1KQFA 2HCZX 3OUGA 3X2JA 1CR5A 1YNND 4FERA 1Y1WA 1PQHA 1L8FA 3IR6A 1FDOA 1WLFA 2V45A 1EU1A 5GLXA 4RV0A 4JCWA 3X2PA 1WCMA 4AOKB 4L48A 3TM7B 2CW0D 1Y4ZA 3IR5A 3SUJA 1BW3A 2VPZA 2G6GA 3HKZA 1AW8B 4KDIA 3DMRA 3CQZA 5C1BA 1Y1VA 1E32A 4GA5A 4FFTA 3SUKA 3X2LA 3X2HA 2PNWA 4AYBA 3TIWA 1G8KA 4JS7A 3HU1A 1H5NA 3X2OA 1Y5IA 3X2GA 2VPXA 3PLXB 1PT0A 2E2IA 2WAQA 4GA6A 2YUJA 5C18A 1H0HA 1E60A 2JIQA 1QDNA 3O5AA 3H0GA 3ML1A 1I3QA 1OGYA 1R9TA 5T5MD 3GTLA 2NYAA 1PYUB 4ZM7A 2JIPA 2VUMA 1E5VA 4C2MA 5DYIA 5T5ID 2YU9A 2JA6A 1QCSA 2E2HA 4DMRA 2A6ED
chains in the Genus database with same CATH topology
4D7ZB 2R93A 2PMZA 1TWGA 5FTKA 4AAYA 1AA6A 1Q16A 2Y0SA 3HU3A 3QQ7A 1KQGA 2R92A 1TWFA 1DMRA 1E61A 2EEOB 1R27A 1E18A 3QWZA 1PQFA 3CF2A 3QQ8A 1PT1A 1FDIA 3CZBA 4KLNA 3GTKA 3GTGA 1PPYA 1TMOA 1ZYRD 5B6CA 2PJHB 2A68D 5FTJA 1G8JA 2JIRA 4CRYG 4KDLA 2V3VA 1TWHA 2JIMA 4AZDA 2O5JD 2JA7A 3HU2A 2G5DA 1K83A 3GTMA 1S3SA 1TWCA 1ZC1A 4CRZA 2B63A 1SMYD 2BE5D 1SFOA 5FTNA 1YLEA 5DYGA 2JA5A 2PICA 2AE0X 1CZ4A 1CZ5A 4KODA 2GAEA 4CS0A 1PYQA 3GTPA 2A6HD 2WB1A 3GTJA 2NAPA 5EPPA 2A69D 2NVXA 2JIOA 3GTOA 2E7ZA 5GLFA 1UHDA 2NVYA 3GTQA 4NOHA 5FTLA 4AONB 2DMRA 1R7RA 1IW7D 3IR7A 2VPYA 3FKIA 1YNJD 2PI8A 2VPWA 4QIWA 2PJJA 1TWAA 1SIWA 5FTMA 4KO8A 2C45A 1DMSA 2R7ZA 1UHEA 2KI8A 3QC8A 1PQEA 2IV2X 1VC3B 1I50A 1KQFA 3OUGA 1CR5A 1YNND 1Y1WA 1PQHA 3IR6A 1FDOA 1WLFA 2V45A 1EU1A 4RV0A 1WCMA 4AOKB 3TM7B 2CW0D 1Y4ZA 3IR5A 2VPZA 2G6GA 3HKZA 1AW8B 4KDIA 3DMRA 3CQZA 5C1BA 1Y1VA 1E32A 4GA5A 4AYBA 2PNWA 3TIWA 1G8KA 3HU1A 1H5NA 1Y5IA 2VPXA 3PLXB 1PT0A 2E2IA 2WAQA 4GA6A 2YUJA 5C18A 1H0HA 1E60A 2JIQA 1QDNA 3O5AA 3H0GA 3ML1A 1I3QA 1OGYA 1R9TA 5T5MD 3GTLA 2NYAA 1PYUB 2JIPA 2VUMA 1E5VA 4C2MA 5DYIA 5T5ID 2YU9A 2JA6A 1QCSA 2E2HA 4DMRA 2A6ED
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4D7Z B;  2R93 A;  2PMZ A;  1TWG A;  5FTK A;  4AAY A;  1AA6 A;  1Q16 A;  2Y0S A;  3HU3 A;  3QQ7 A;  1KQG A;  2R92 A;  1TWF A;  1DMR A;  1E61 A;  2EEO B;  1R27 A;  1E18 A;  3QWZ A;  1PQF A;  3CF2 A;  3QQ8 A;  1PT1 A;  1FDI A;  4KLN A;  3GTK A;  3GTG A;  1PPY A;  1TMO A;  5B6C A;  2PJH B;  5FTJ A;  4CRY G;  1G8J A;  2JIR A;  4KDL A;  2V3V A;  1TWH A;  2JIM A;  4AZD A;  2JA7 A;  3HU2 A;  1K83 A;  3GTM A;  1S3S A;  1TWC A;  2B63 A;  4CRZ A;  1SFO A;  5FTN A;  1YLE A;  5DYG A;  2JA5 A;  1CZ4 A;  1CZ5 A;  4KOD A;  4CS0 A;  1PYQ A;  3GTP A;  2WB1 A;  3GTJ A;  2NAP A;  5EPP A;  2NVX A;  2JIO A;  3GTO A;  2E7Z A;  5GLF A;  1UHD A;  2NVY A;  3GTQ A;  5FTL A;  4AON B;  2DMR A;  1R7R A;  1IW7 D;  3IR7 A;  2VPY A;  3FKI A;  2VPW A;  4QIW A;  1TWA A;  1SIW A;  5FTM A;  4KO8 A;  2C45 A;  1DMS A;  2R7Z A;  1UHE A;  2KI8 A;  3QC8 A;  1PQE A;  2IV2 X;  1VC3 B;  1I50 A;  1KQF A;  3OUG A;  1CR5 A;  1Y1W A;  1PQH A;  3IR6 A;  1FDO A;  1WLF A;  2V45 A;  1EU1 A;  4RV0 A;  1WCM A;  4AOK B;  3TM7 B;  1Y4Z A;  3IR5 A;  2VPZ A;  3HKZ A;  1AW8 B;  4KDI A;  3DMR A;  3CQZ A;  5C1B A;  1Y1V A;  1E32 A;  4GA5 A;  4AYB A;  3TIW A;  1G8K A;  3HU1 A;  1H5N A;  1Y5I A;  2VPX A;  3PLX B;  1PT0 A;  2E2I A;  2WAQ A;  4GA6 A;  5C18 A;  1H0H A;  1E60 A;  2JIQ A;  1QDN A;  3O5A A;  3H0G A;  3ML1 A;  1I3Q A;  1OGY A;  1R9T A;  5T5M D;  3GTL A;  2NYA A;  1PYU B;  2JIP A;  2VUM A;  1E5V A;  4C2M A;  5DYI A;  5T5I D;  2YU9 A;  2JA6 A;  1QCS A;  2E2H A;  4DMR A; 
#chains in the Genus database with same CATH topology
 3M3G A;  2ENG A;  4D7Z B;  2R93 A;  2PMZ A;  2KQA A;  1TWG A;  3D30 A;  1WC2 A;  4JP6 A;  5FTK A;  1Q16 A;  4AAY A;  2Y0S A;  3X2K A;  1AA6 A;  3HU3 A;  3QQ7 A;  1KQG A;  2R92 A;  3X2N A;  1TWF A;  1DMR A;  1E61 A;  2EEO B;  1R27 A;  1E18 A;  3QWZ A;  1PQF A;  4JJO A;  3CF2 A;  3QQ8 A;  1PT1 A;  4JP7 A;  1FDI A;  3CZB A;  4KLN A;  3GTK A;  3GTG A;  1PPY A;  1TMO A;  1ZYR D;  4FG2 A;  5B6C A;  2PJH B;  2A68 D;  5FTJ A;  1G8J A;  2JIR A;  4CRY G;  1N10 A;  4KDL A;  2V3V A;  1TWH A;  2JIM A;  4AZD A;  2O5J D;  2JA7 A;  3SUL A;  3HU2 A;  2G5D A;  1K83 A;  3GTM A;  1S3S A;  1TWC A;  1ZC1 A;  4CRZ A;  2B63 A;  1SMY D;  2BE5 D;  1SFO A;  5FTN A;  1YLE A;  1HD5 A;  5DYG A;  2JA5 A;  2PIC A;  2AE0 X;  1CZ4 A;  1CZ5 A;  4KOD A;  4ENG A;  2GAE A;  1OA7 A;  4CS0 A;  1PYQ A;  3GTP A;  1BW4 A;  2A6H D;  2WB1 A;  3GTJ A;  2NAP A;  5EPP A;  2A69 D;  2NVX A;  2JIO A;  3GTO A;  3X2M A;  2E7Z A;  5GLF A;  5GM9 A;  5GLY A;  1UHD A;  2NVY A;  2BH0 A;  4NOH A;  3GTQ A;  5FTL A;  4AON B;  2DMR A;  1R7R A;  1IW7 D;  3X2I A;  3ENG A;  3IR7 A;  2VPY A;  3FKI A;  1YNJ D;  2PI8 A;  3SUM A;  2VPW A;  4QIW A;  4AVR A;  2PJJ A;  1TWA A;  1SIW A;  1OA9 A;  5FTM A;  4KO8 A;  2C45 A;  1DMS A;  2R7Z A;  1UHE A;  2KI8 A;  3QC8 A;  1PQE A;  2IV2 X;  1VC3 B;  4FG4 A;  5H4U A;  1I50 A;  1KQF A;  2HCZ X;  3OUG A;  3X2J A;  1CR5 A;  1YNN D;  4FER A;  1Y1W A;  1PQH A;  1L8F A;  3IR6 A;  1FDO A;  1WLF A;  2V45 A;  1EU1 A;  5GLX A;  4RV0 A;  4JCW A;  3X2P A;  1WCM A;  4AOK B;  4L48 A;  3TM7 B;  2CW0 D;  1Y4Z A;  3IR5 A;  3SUJ A;  1BW3 A;  2VPZ A;  2G6G A;  3HKZ A;  1AW8 B;  4KDI A;  3DMR A;  3CQZ A;  5C1B A;  1Y1V A;  1E32 A;  4GA5 A;  4FFT A;  3SUK A;  3X2L A;  3X2H A;  2PNW A;  4AYB A;  3TIW A;  1G8K A;  4JS7 A;  3HU1 A;  1H5N A;  3X2O A;  1Y5I A;  3X2G A;  2VPX A;  3PLX B;  1PT0 A;  2E2I A;  2WAQ A;  4GA6 A;  2YUJ A;  5C18 A;  1H0H A;  1E60 A;  2JIQ A;  1QDN A;  3O5A A;  3H0G A;  3ML1 A;  1I3Q A;  1OGY A;  1R9T A;  5T5M D;  3GTL A;  2NYA A;  1PYU B;  4ZM7 A;  2JIP A;  2VUM A;  1E5V A;  4C2M A;  5DYI A;  5T5I D;  2YU9 A;  2JA6 A;  1QCS A;  2E2H A;  4DMR A;  2A6E D; 
#chains in the Genus database with same CATH homology
 4D7Z B;  2R93 A;  2PMZ A;  1TWG A;  5FTK A;  4AAY A;  1AA6 A;  1Q16 A;  2Y0S A;  3HU3 A;  3QQ7 A;  1KQG A;  2R92 A;  1TWF A;  1DMR A;  1E61 A;  2EEO B;  1R27 A;  1E18 A;  3QWZ A;  1PQF A;  3CF2 A;  3QQ8 A;  1PT1 A;  1FDI A;  3CZB A;  4KLN A;  3GTK A;  3GTG A;  1PPY A;  1TMO A;  1ZYR D;  5B6C A;  2PJH B;  2A68 D;  5FTJ A;  1G8J A;  2JIR A;  4CRY G;  4KDL A;  2V3V A;  1TWH A;  2JIM A;  4AZD A;  2O5J D;  2JA7 A;  3HU2 A;  2G5D A;  1K83 A;  3GTM A;  1S3S A;  1TWC A;  1ZC1 A;  4CRZ A;  2B63 A;  1SMY D;  2BE5 D;  1SFO A;  5FTN A;  1YLE A;  5DYG A;  2JA5 A;  2PIC A;  2AE0 X;  1CZ4 A;  1CZ5 A;  4KOD A;  2GAE A;  4CS0 A;  1PYQ A;  3GTP A;  2A6H D;  2WB1 A;  3GTJ A;  2NAP A;  5EPP A;  2A69 D;  2NVX A;  2JIO A;  3GTO A;  2E7Z A;  5GLF A;  1UHD A;  2NVY A;  3GTQ A;  4NOH A;  5FTL A;  4AON B;  2DMR A;  1R7R A;  1IW7 D;  3IR7 A;  2VPY A;  3FKI A;  1YNJ D;  2PI8 A;  2VPW A;  4QIW A;  2PJJ A;  1TWA A;  1SIW A;  5FTM A;  4KO8 A;  2C45 A;  1DMS A;  2R7Z A;  1UHE A;  2KI8 A;  3QC8 A;  1PQE A;  2IV2 X;  1VC3 B;  1I50 A;  1KQF A;  3OUG A;  1CR5 A;  1YNN D;  1Y1W A;  1PQH A;  3IR6 A;  1FDO A;  1WLF A;  2V45 A;  1EU1 A;  4RV0 A;  1WCM A;  4AOK B;  3TM7 B;  2CW0 D;  1Y4Z A;  3IR5 A;  2VPZ A;  2G6G A;  3HKZ A;  1AW8 B;  4KDI A;  3DMR A;  3CQZ A;  5C1B A;  1Y1V A;  1E32 A;  4GA5 A;  4AYB A;  2PNW A;  3TIW A;  1G8K A;  3HU1 A;  1H5N A;  1Y5I A;  2VPX A;  3PLX B;  1PT0 A;  2E2I A;  2WAQ A;  4GA6 A;  2YUJ A;  5C18 A;  1H0H A;  1E60 A;  2JIQ A;  1QDN A;  3O5A A;  3H0G A;  3ML1 A;  1I3Q A;  1OGY A;  1R9T A;  5T5M D;  3GTL A;  2NYA A;  1PYU B;  2JIP A;  2VUM A;  1E5V A;  4C2M A;  5DYI A;  5T5I D;  2YU9 A;  2JA6 A;  1QCS A;  2E2H A;  4DMR A;  2A6E D; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...