1OA7 | Genus

Total Genus 69

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	69
sequence length	207
structure length	207
Chain Sequence	ANGQSTRYWDCCKPSCGWRGKGPVNQPVYSCDANFQRIHDFDAVSGCEGGPAFSCADHSPWAINDNLSYGFAATALSGQTEESWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNHFDLNIPGGGVGLFDGCTPQFGGLPGARYGGISSRQECDSFPEPLKPGCQWRFDWFQNADNPSFTFERVQCPEELVARTGCRRHDDGGFA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase
publication title	Crystal Structure of a Family 45 Endoglucanase from Melanocarpus Albomyces: Mechanistic Implications Based on the Free and Cellobiose-Bound Forms pubmed doi rcsb
molecule keywords	CELLULASE
total genus	69
structure length	207
sequence length	207
ec nomenclature	ec 3.2.1.4: Cellulase.
pdb deposition date	2003-01-02

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF02015	Glyco_hydro_45	Glycosyl hydrolase family 45

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.40.40.10	Mainly Beta	Beta Barrel	Barwin-like endoglucanases	RlpA-like domain	1oa7A00

4JP7A 3SUKA 3X2PA 1BW4A 3ENGA 1WC2A 4ZM7A 3X2HA 2PNWA 2KQAA 4FG2A 2PI8A 4L48A 1OA7A 4AVRA 2PJJA 4JP6A 1N10A 2PICA 3SUMA 2BH0A 3SUJA 2ENGA 4FFTA 2AE0X 2HCZX 3X2LA 1HD5A 3X2OA 1OA9A 4JCWA 3X2JA 1L8FA 5GM9A 2G6GA 3X2GA 5H4UA 3SULA 2GAEA 3X2NA 3CZBA 4FG4A 5GLYA 5GLXA 3D30A 4FERA 4JS7A 3X2KA 3X2MA 3M3GA 4ENGA 2G5DA 1BW3A 4JJOA 3X2IA
chains in the Genus database with same CATH superfamily

1UHDA 1AW8B 1TWCA 3IR5A 3OUGA 1BW4A 3ENGA 3IR7A 2PNWA 2JA6A 1E61A 2V45A 2NYAA 1N10A 5DYGA 3GTMA 2WAQA 2JIOA 1PT1A 4GA6A 2HCZX 2DMRA 3HU2A 3QQ8A 1AA6A 2VPWA 4KLNA 3X2JA 2JIPA 2E2IA 5FTNA 3H0GA 4KDIA 5DYIA 2A68D 3GTJA 2VUMA 3CZBA 4FG4A 2B63A 1Y1WA 2C45A 1FDIA 5C18A 1E32A 1Y4ZA 3D30A 2PMZA 2R7ZA 4ENGA 1PYUB 1TWAA 1KQFA 3GTOA 1CR5A 1QDNA 3GTLA 4ZM7A 3X2HA 1ZC1A 2KQAA 4FG2A 5T5ID 1CZ5A 1DMRA 1WCMA 2PI8A 5T5MD 1SFOA 2PJJA 1FDOA 2PICA 3SUMA 4AYBA 3SUJA 4AONB 3DMRA 2R92A 2IV2X 3TM7B 1HD5A 3ML1A 2YU9A 1OA9A 1SIWA 4GA5A 1R7RA 1L8FA 3HU1A 4C2MA 2JIMA 5GM9A 2E7ZA 3X2GA 3X2NA 1G8JA 3QQ7A 1H0HA 1G8KA 1PQHA 1R27A 2WB1A 5GLXA 4FERA 1EU1A 3CF2A 4NOHA 3X2KA 1TMOA 1Y1VA 2Y0SA 3GTGA 5B6CA 2V3VA 4AOKB 2JIRA 1E5VA 1YNJD 3SUKA 1PQFA 1ZYRD 3QC8A 3X2PA 4RV0A 1WC2A 1TWGA 3IR6A 5FTLA 1OGYA 1Y5IA 1E60A 1PPYA 2PJHB 2KI8A 4L48A 1OA7A 3HKZA 4JP6A 1H5NA 2JIQA 1SMYD 2BH0A 2YUJA 1K83A 2ENGA 3GTPA 2AE0X 1YNND 3X2LA 2A6HD 2BE5D 2NVXA 5FTMA 1TWFA 1TWHA 4CRZA 3FKIA 4KODA 5H4UA 2GAEA 1PYQA 1YLEA 1I3QA 5GLYA 3PLXB 3HU3A 2VPXA 3X2MA 3GTKA 2VPZA 2G5DA 1BW3A 4JJOA 1S3SA 1Q16A 4JP7A 4KDLA 5GLFA 4CRYG 1UHEA 2VPYA 3O5AA 1KQGA 5FTKA 1E18A 4KO8A 4AVRA 2O5JD 2NAPA 1DMSA 1R9TA 1CZ4A 4FFTA 5C1BA 2E2HA 3QWZA 3GTQA 2NVYA 3X2OA 1IW7D 1PQEA 4JCWA 2JA5A 4AAYA 2JA7A 1I50A 2G6GA 3SULA 4CS0A 1PT0A 1WLFA 4D7ZB 2A6ED 4DMRA 5FTJA 1VC3B 1QCSA 4JS7A 4QIWA 3CQZA 5EPPA 2R93A 4AZDA 3M3GA 2A69D 3TIWA 2CW0D 3X2IA 2EEOB
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 4JP7 A;  3SUK A;  3X2P A;  1BW4 A;  3ENG A;  1WC2 A;  4ZM7 A;  3X2H A;  2PNW A;  2KQA A;  4FG2 A;  2PI8 A;  4L48 A;  1OA7 A;  4AVR A;  2PJJ A;  4JP6 A;  1N10 A;  2PIC A;  3SUM A;  2BH0 A;  3SUJ A;  2ENG A;  4FFT A;  2AE0 X;  2HCZ X;  3X2L A;  1HD5 A;  3X2O A;  1OA9 A;  4JCW A;  3X2J A;  1L8F A;  5GM9 A;  2G6G A;  3X2G A;  5H4U A;  3SUL A;  2GAE A;  3X2N A;  3CZB A;  4FG4 A;  5GLY A;  5GLX A;  3D30 A;  4FER A;  4JS7 A;  3X2K A;  3X2M A;  3M3G A;  4ENG A;  2G5D A;  1BW3 A;  4JJO A;  3X2I A; 
#chains in the Genus database with same CATH topology
 1UHD A;  1AW8 B;  1TWC A;  3IR5 A;  3OUG A;  1BW4 A;  3ENG A;  3IR7 A;  2PNW A;  2JA6 A;  1E61 A;  2V45 A;  2NYA A;  1N10 A;  5DYG A;  3GTM A;  2WAQ A;  2JIO A;  1PT1 A;  4GA6 A;  2HCZ X;  2DMR A;  3HU2 A;  3QQ8 A;  1AA6 A;  2VPW A;  4KLN A;  3X2J A;  2JIP A;  2E2I A;  5FTN A;  3H0G A;  4KDI A;  5DYI A;  2A68 D;  3GTJ A;  2VUM A;  3CZB A;  4FG4 A;  2B63 A;  1Y1W A;  2C45 A;  1FDI A;  5C18 A;  1E32 A;  1Y4Z A;  3D30 A;  2PMZ A;  2R7Z A;  4ENG A;  1PYU B;  1TWA A;  1KQF A;  3GTO A;  1CR5 A;  1QDN A;  3GTL A;  4ZM7 A;  3X2H A;  1ZC1 A;  2KQA A;  4FG2 A;  5T5I D;  1CZ5 A;  1DMR A;  1WCM A;  2PI8 A;  5T5M D;  1SFO A;  2PJJ A;  1FDO A;  2PIC A;  3SUM A;  4AYB A;  3SUJ A;  4AON B;  3DMR A;  2R92 A;  2IV2 X;  3TM7 B;  1HD5 A;  3ML1 A;  2YU9 A;  1OA9 A;  1SIW A;  4GA5 A;  1R7R A;  1L8F A;  3HU1 A;  4C2M A;  2JIM A;  5GM9 A;  2E7Z A;  3X2G A;  3X2N A;  1G8J A;  3QQ7 A;  1H0H A;  1G8K A;  1PQH A;  1R27 A;  2WB1 A;  5GLX A;  4FER A;  1EU1 A;  3CF2 A;  4NOH A;  3X2K A;  1TMO A;  1Y1V A;  2Y0S A;  3GTG A;  5B6C A;  2V3V A;  4AOK B;  2JIR A;  1E5V A;  1YNJ D;  3SUK A;  1PQF A;  1ZYR D;  3QC8 A;  3X2P A;  4RV0 A;  1WC2 A;  1TWG A;  3IR6 A;  5FTL A;  1OGY A;  1Y5I A;  1E60 A;  1PPY A;  2PJH B;  2KI8 A;  4L48 A;  1OA7 A;  3HKZ A;  4JP6 A;  1H5N A;  2JIQ A;  1SMY D;  2BH0 A;  2YUJ A;  1K83 A;  2ENG A;  3GTP A;  2AE0 X;  1YNN D;  3X2L A;  2A6H D;  2BE5 D;  2NVX A;  5FTM A;  1TWF A;  1TWH A;  4CRZ A;  3FKI A;  4KOD A;  5H4U A;  2GAE A;  1PYQ A;  1YLE A;  1I3Q A;  5GLY A;  3PLX B;  3HU3 A;  2VPX A;  3X2M A;  3GTK A;  2VPZ A;  2G5D A;  1BW3 A;  4JJO A;  1S3S A;  1Q16 A;  4JP7 A;  4KDL A;  5GLF A;  4CRY G;  1UHE A;  2VPY A;  3O5A A;  1KQG A;  5FTK A;  1E18 A;  4KO8 A;  4AVR A;  2O5J D;  2NAP A;  1DMS A;  1R9T A;  1CZ4 A;  4FFT A;  5C1B A;  2E2H A;  3QWZ A;  3GTQ A;  2NVY A;  3X2O A;  1IW7 D;  1PQE A;  4JCW A;  2JA5 A;  4AAY A;  2JA7 A;  1I50 A;  2G6G A;  3SUL A;  4CS0 A;  1PT0 A;  1WLF A;  4D7Z B;  2A6E D;  4DMR A;  5FTJ A;  1VC3 B;  1QCS A;  4JS7 A;  4QIW A;  3CQZ A;  5EPP A;  2R93 A;  4AZD A;  3M3G A;  2A69 D;  3TIW A;  2CW0 D;  3X2I A;  2EEO B; 
#chains in the Genus database with same CATH homology
 4JP7 A;  3SUK A;  3X2P A;  1BW4 A;  3ENG A;  1WC2 A;  4ZM7 A;  3X2H A;  2PNW A;  2KQA A;  4FG2 A;  2PI8 A;  4L48 A;  1OA7 A;  4AVR A;  2PJJ A;  4JP6 A;  1N10 A;  2PIC A;  3SUM A;  2BH0 A;  3SUJ A;  2ENG A;  4FFT A;  2AE0 X;  2HCZ X;  3X2L A;  1HD5 A;  3X2O A;  1OA9 A;  4JCW A;  3X2J A;  1L8F A;  5GM9 A;  2G6G A;  3X2G A;  5H4U A;  3SUL A;  2GAE A;  3X2N A;  3CZB A;  4FG4 A;  5GLY A;  5GLX A;  3D30 A;  4FER A;  4JS7 A;  3X2K A;  3X2M A;  3M3G A;  4ENG A;  2G5D A;  1BW3 A;  4JJO A;  3X2I A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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1OA7A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations