2K7XA

Solution structure of c-terminal domain of sars-cov main protease
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
120
structure length
120
Chain Sequence
DRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Sars coronavirus
publication title C-terminal domain of SARS-CoV main protease can form a 3D domain-swapped dimer.
pubmed doi rcsb
molecule keywords SARS-CoV main protease
total genus 37
structure length 120
sequence length 120
ec nomenclature
pdb deposition date 2008-08-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1840.10 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3 2k7xA00
2C3SA 3SNDA 2GT7A 2OP9A 2LIZA 3TITA 2YNBA 1Q2WA 3M3VA 4YOJA 2Z94A 2Z9KA 4WMFA 5C5OA 2GX4A 4XFQA 3TLOA 4MDSA 4YLUA 1UK4A 3SNAA 3IWMA 1UK3A 1UK2A 3VB4A 5GWZA 2A5AA 2ALVA 3M3SA 3ATWA 3SNCA 1Z1IA 2DUCA 2ZU2A 2QC2A 2Z3EA 4WMEA 2GZ9A 3D62A 4WY3A 3M3TA 3F9HA 2ZU5A 3F9FA 2Z9LA 3EA8A 3SNEA 2Q6GA 3EA9A 2GTBA 3TIUA 4HI3A 3E91A 2Z9GA 3D23A 4YOIA 4YO9A 1UJ1A 5B6OA 2BX4A 1P9UA 3V3MA 5C5NA 3VB5A 2YNAA 2D2DA 2A5IA 3F9GA 3AW1A 4YOGA 1P9SA 3SN8A 2A5KA 4TWYA 2V6NA 2BX3A 1WOFA 3EBNA 4F49A 2H2ZA 3SNBA 3F9EA 2AMDA 2GT8A 2QIQA 2Q6DA 5C3NA 2AMPA 3SZNA 2Q6FA 3EAJA 4WMDA 3VB3A 2VJ1A 2PWXA 2Z3DA 3EA7A 2HOBA 3FZDA 3AW0A 1LVOA 4ZUHA 4ZROA 2AMQA 2Z3CA 3TNTA 2ZU4A 3TNSA 2QCYA 2GZ8A 5EU8A 3VB7A 2K7XA 4RSPA 3VB6A 1Z1JA 3AVZA 5HYOA 2Z9JA 2GZ7A 4TWWA
chains in the Genus database with same CATH superfamily
2C3SA 3SNDA 2GT7A 2OP9A 2LIZA 3TITA 2YNBA 1Q2WA 3M3VA 4YOJA 2Z94A 2Z9KA 4WMFA 5C5OA 2GX4A 4XFQA 3TLOA 4MDSA 4YLUA 1UK4A 3SNAA 3IWMA 1UK3A 1UK2A 3VB4A 5GWZA 2A5AA 2ALVA 3M3SA 3ATWA 3SNCA 1Z1IA 2DUCA 2ZU2A 2QC2A 2Z3EA 4WMEA 2GZ9A 3D62A 4WY3A 3M3TA 3F9HA 2ZU5A 3F9FA 2Z9LA 3EA8A 3SNEA 2Q6GA 3EA9A 2GTBA 3TIUA 4HI3A 3E91A 2Z9GA 3D23A 4YOIA 4YO9A 1UJ1A 5B6OA 2BX4A 1P9UA 3V3MA 5C5NA 3VB5A 2YNAA 2D2DA 2A5IA 3F9GA 3AW1A 4YOGA 1P9SA 3SN8A 2A5KA 4TWYA 2V6NA 2BX3A 1WOFA 3EBNA 4F49A 2H2ZA 3SNBA 3F9EA 2AMDA 2GT8A 2QIQA 2Q6DA 5C3NA 2AMPA 3SZNA 2Q6FA 3EAJA 4WMDA 3VB3A 2VJ1A 2PWXA 2Z3DA 3EA7A 2HOBA 3FZDA 3AW0A 1LVOA 4ZUHA 4ZROA 2AMQA 2Z3CA 3TNTA 2ZU4A 3TNSA 2QCYA 2GZ8A 5EU8A 3VB7A 2K7XA 4RSPA 3VB6A 1Z1JA 3AVZA 5HYOA 2Z9JA 2GZ7A 4TWWA
chains in the Genus database with same CATH topology
2C3SA 3SNDA 2GT7A 2OP9A 2LIZA 3TITA 2YNBA 1Q2WA 3M3VA 4YOJA 2Z94A 2Z9KA 4WMFA 5C5OA 2GX4A 4XFQA 3TLOA 4MDSA 4YLUA 1UK4A 3SNAA 3IWMA 1UK3A 1UK2A 3VB4A 5GWZA 2A5AA 2ALVA 3M3SA 3ATWA 3SNCA 1Z1IA 2DUCA 2ZU2A 2QC2A 2Z3EA 4WMEA 2GZ9A 3D62A 4WY3A 3M3TA 3F9HA 2ZU5A 3F9FA 2Z9LA 3EA8A 3SNEA 2Q6GA 3EA9A 2GTBA 3TIUA 4HI3A 3E91A 2Z9GA 3D23A 4YOIA 4YO9A 1UJ1A 5B6OA 2BX4A 1P9UA 3V3MA 5C5NA 3VB5A 2YNAA 2D2DA 2A5IA 3F9GA 3AW1A 4YOGA 1P9SA 3SN8A 2A5KA 4TWYA 2V6NA 2BX3A 1WOFA 3EBNA 4F49A 2H2ZA 3SNBA 3F9EA 2AMDA 2GT8A 2QIQA 2Q6DA 5C3NA 2AMPA 3SZNA 2Q6FA 3EAJA 4WMDA 3VB3A 2VJ1A 2PWXA 2Z3DA 3EA7A 2HOBA 3FZDA 3AW0A 1LVOA 4ZUHA 4ZROA 2AMQA 2Z3CA 3TNTA 2ZU4A 3TNSA 2QCYA 2GZ8A 5EU8A 3VB7A 2K7XA 4RSPA 3VB6A 1Z1JA 3AVZA 5HYOA 2Z9JA 2GZ7A 4TWWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2C3S A;  3SND A;  2GT7 A;  2OP9 A;  2LIZ A;  3TIT A;  2YNB A;  1Q2W A;  3M3V A;  4YOJ A;  2Z94 A;  2Z9K A;  4WMF A;  5C5O A;  2GX4 A;  4XFQ A;  3TLO A;  4MDS A;  4YLU A;  1UK4 A;  3SNA A;  3IWM A;  1UK3 A;  1UK2 A;  3VB4 A;  5GWZ A;  2A5A A;  2ALV A;  3M3S A;  3ATW A;  3SNC A;  1Z1I A;  2DUC A;  2ZU2 A;  2QC2 A;  2Z3E A;  4WME A;  2GZ9 A;  3D62 A;  4WY3 A;  3M3T A;  3F9H A;  2ZU5 A;  3F9F A;  2Z9L A;  3EA8 A;  3SNE A;  2Q6G A;  3EA9 A;  2GTB A;  3TIU A;  4HI3 A;  3E91 A;  2Z9G A;  3D23 A;  4YOI A;  4YO9 A;  1UJ1 A;  5B6O A;  2BX4 A;  1P9U A;  3V3M A;  5C5N A;  3VB5 A;  2YNA A;  2D2D A;  2A5I A;  3F9G A;  3AW1 A;  4YOG A;  1P9S A;  3SN8 A;  2A5K A;  4TWY A;  2V6N A;  2BX3 A;  1WOF A;  3EBN A;  4F49 A;  2H2Z A;  3SNB A;  3F9E A;  2AMD A;  2GT8 A;  2QIQ A;  2Q6D A;  5C3N A;  2AMP A;  3SZN A;  2Q6F A;  3EAJ A;  4WMD A;  3VB3 A;  2VJ1 A;  2PWX A;  2Z3D A;  3EA7 A;  2HOB A;  3FZD A;  3AW0 A;  1LVO A;  4ZUH A;  4ZRO A;  2AMQ A;  2Z3C A;  3TNT A;  2ZU4 A;  3TNS A;  2QCY A;  2GZ8 A;  5EU8 A;  3VB7 A;  2K7X A;  4RSP A;  3VB6 A;  1Z1J A;  3AVZ A;  5HYO A;  2Z9J A;  2GZ7 A;  4TWW A; 
#chains in the Genus database with same CATH topology
 2C3S A;  3SND A;  2GT7 A;  2OP9 A;  2LIZ A;  3TIT A;  2YNB A;  1Q2W A;  3M3V A;  4YOJ A;  2Z94 A;  2Z9K A;  4WMF A;  5C5O A;  2GX4 A;  4XFQ A;  3TLO A;  4MDS A;  4YLU A;  1UK4 A;  3SNA A;  3IWM A;  1UK3 A;  1UK2 A;  3VB4 A;  5GWZ A;  2A5A A;  2ALV A;  3M3S A;  3ATW A;  3SNC A;  1Z1I A;  2DUC A;  2ZU2 A;  2QC2 A;  2Z3E A;  4WME A;  2GZ9 A;  3D62 A;  4WY3 A;  3M3T A;  3F9H A;  2ZU5 A;  3F9F A;  2Z9L A;  3EA8 A;  3SNE A;  2Q6G A;  3EA9 A;  2GTB A;  3TIU A;  4HI3 A;  3E91 A;  2Z9G A;  3D23 A;  4YOI A;  4YO9 A;  1UJ1 A;  5B6O A;  2BX4 A;  1P9U A;  3V3M A;  5C5N A;  3VB5 A;  2YNA A;  2D2D A;  2A5I A;  3F9G A;  3AW1 A;  4YOG A;  1P9S A;  3SN8 A;  2A5K A;  4TWY A;  2V6N A;  2BX3 A;  1WOF A;  3EBN A;  4F49 A;  2H2Z A;  3SNB A;  3F9E A;  2AMD A;  2GT8 A;  2QIQ A;  2Q6D A;  5C3N A;  2AMP A;  3SZN A;  2Q6F A;  3EAJ A;  4WMD A;  3VB3 A;  2VJ1 A;  2PWX A;  2Z3D A;  3EA7 A;  2HOB A;  3FZD A;  3AW0 A;  1LVO A;  4ZUH A;  4ZRO A;  2AMQ A;  2Z3C A;  3TNT A;  2ZU4 A;  3TNS A;  2QCY A;  2GZ8 A;  5EU8 A;  3VB7 A;  2K7X A;  4RSP A;  3VB6 A;  1Z1J A;  3AVZ A;  5HYO A;  2Z9J A;  2GZ7 A;  4TWW A; 
#chains in the Genus database with same CATH homology
 2C3S A;  3SND A;  2GT7 A;  2OP9 A;  2LIZ A;  3TIT A;  2YNB A;  1Q2W A;  3M3V A;  4YOJ A;  2Z94 A;  2Z9K A;  4WMF A;  5C5O A;  2GX4 A;  4XFQ A;  3TLO A;  4MDS A;  4YLU A;  1UK4 A;  3SNA A;  3IWM A;  1UK3 A;  1UK2 A;  3VB4 A;  5GWZ A;  2A5A A;  2ALV A;  3M3S A;  3ATW A;  3SNC A;  1Z1I A;  2DUC A;  2ZU2 A;  2QC2 A;  2Z3E A;  4WME A;  2GZ9 A;  3D62 A;  4WY3 A;  3M3T A;  3F9H A;  2ZU5 A;  3F9F A;  2Z9L A;  3EA8 A;  3SNE A;  2Q6G A;  3EA9 A;  2GTB A;  3TIU A;  4HI3 A;  3E91 A;  2Z9G A;  3D23 A;  4YOI A;  4YO9 A;  1UJ1 A;  5B6O A;  2BX4 A;  1P9U A;  3V3M A;  5C5N A;  3VB5 A;  2YNA A;  2D2D A;  2A5I A;  3F9G A;  3AW1 A;  4YOG A;  1P9S A;  3SN8 A;  2A5K A;  4TWY A;  2V6N A;  2BX3 A;  1WOF A;  3EBN A;  4F49 A;  2H2Z A;  3SNB A;  3F9E A;  2AMD A;  2GT8 A;  2QIQ A;  2Q6D A;  5C3N A;  2AMP A;  3SZN A;  2Q6F A;  3EAJ A;  4WMD A;  3VB3 A;  2VJ1 A;  2PWX A;  2Z3D A;  3EA7 A;  2HOB A;  3FZD A;  3AW0 A;  1LVO A;  4ZUH A;  4ZRO A;  2AMQ A;  2Z3C A;  3TNT A;  2ZU4 A;  3TNS A;  2QCY A;  2GZ8 A;  5EU8 A;  3VB7 A;  2K7X A;  4RSP A;  3VB6 A;  1Z1J A;  3AVZ A;  5HYO A;  2Z9J A;  2GZ7 A;  4TWW A; 
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