3PLXB

The crystal structure of aspartate alpha-decarboxylase from campylobacter jejuni subsp. jejuni nctc 11168
Total Genus 19
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
100
structure length
100
Chain Sequence
ISIDEKLLQASGILEYEKVQVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKPKVVFVDENNTATKITNYEKHGAI
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title The crystal structure of aspartate alpha-decarboxylase from Campylobacter jejuni subsp. jejuni NCTC 11168
rcsb
molecule keywords Aspartate 1-decarboxylase
molecule tags Lyase
source organism Campylobacter jejuni subsp. jejuni
total genus 19
structure length 100
sequence length 100
ec nomenclature ec 4.1.1.11: Aspartate 1-decarboxylase.
pdb deposition date 2010-11-15
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.20 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 3plxB00
3CF2A 3TM7B 3TIWA 2KI8A 1SFOA 1FDIA 2DMRA 2V3VA 1PYUB 1E32A 2R7ZA 1CR5A 5FTNA 2R92A 3H0GA 5FTJA 1KQFA 1Y1VA 3GTQA 2E2HA 2IV2X 2VPWA 2E2IA 2EEOB 1TWCA 1IW7D 4AYBA 2NAPA 4AONB 3GTGA 4GA5A 5DYGA 4AAYA 1E5VA 1PQFA 5T5MD 2C45A 1S3SA 2JA6A 3DMRA 1KQGA 2VPXA 1QDNA 2JIQA 3PLXB 5T5ID 2VUMA 1YLEA 3IR7A 2B63A 5FTMA 1OGYA 1AW8B 1WLFA 1PPYA 4CRZA 3IR5A 2JIPA 3GTLA 1FDOA 2E7ZA 2Y0SA 1PYQA 2NVYA 1DMSA 3IR6A 2R93A 1QCSA 1E60A 4KLNA 4KDIA 2JIRA 5B6CA 1Y4ZA 1Y1WA 1R7RA 2NVXA 1E18A 1E61A 4KO8A 1PT0A 4AOKB 3QQ7A 4AZDA 5C18A 1CZ5A 3FKIA 3GTMA 3GTOA 3GTPA 4D7ZB 1TWGA 2WAQA 3QQ8A 4GA6A 4C2MA 1AA6A 1TWHA 5FTKA 1PQEA 1G8JA 3O5AA 1H0HA 4KDLA 1PT1A 3GTKA 1K83A 3HKZA 2NYAA 2JIOA 1PQHA 4RV0A 2WB1A 1I50A 4DMRA 3HU2A 2YU9A 4CS0A 2JA5A 2V45A 1SIWA 1H5NA 1EU1A 1UHDA 1I3QA 1G8KA 2JIMA 5GLFA 2JA7A 1Y5IA 5DYIA 3QC8A 3GTJA 3QWZA 1UHEA 2PMZA 3CQZA 4QIWA 5FTLA 3HU1A 3ML1A 4KODA 4CRYG 1CZ4A 1Q16A 3OUGA 2PJHB 1VC3B 2VPZA 1WCMA 5EPPA 1R27A 3HU3A 1DMRA 1TMOA 1TWAA 1TWFA 1R9TA 5C1BA 2VPYA
chains in the Genus database with same CATH superfamily
3CF2A 3TM7B 3TIWA 2KI8A 1OA7A 1SFOA 1FDIA 2DMRA 2V3VA 1PYUB 4FG2A 1E32A 2R7ZA 1CR5A 2GAEA 1N10A 5FTNA 2R92A 3H0GA 5FTJA 3X2LA 1SMYD 1KQFA 1Y1VA 3GTQA 2E2HA 3X2HA 2IV2X 2A69D 2VPWA 5GM9A 2E2IA 2EEOB 1TWCA 1IW7D 4AYBA 2NAPA 4AONB 3GTGA 4GA5A 5DYGA 4AAYA 1E5VA 1PQFA 2BE5D 5H4UA 5T5MD 3X2JA 2C45A 1S3SA 2JA6A 3DMRA 1KQGA 2PI8A 2VPXA 4JJOA 1QDNA 2JIQA 3PLXB 5T5ID 2VUMA 3X2IA 1WC2A 1YLEA 3IR7A 4AVRA 2B63A 3SUJA 1ZYRD 4JP6A 5FTMA 3X2GA 4ZM7A 3M3GA 1AW8B 1OGYA 1WLFA 2AE0X 2PICA 3SUMA 1PPYA 4CRZA 3IR5A 2JIPA 3GTLA 1FDOA 2E7ZA 3CZBA 2Y0SA 3ENGA 1PYQA 2NVYA 3X2NA 1DMSA 3IR6A 1ZC1A 2R93A 4FFTA 2A6ED 1QCSA 1E60A 4KLNA 4KDIA 2JIRA 2A6HD 5B6CA 1Y4ZA 1Y1WA 1R7RA 2G6GA 2G5DA 2NVXA 1E18A 1E61A 2YUJA 4KO8A 1PT0A 4AOKB 3QQ7A 4AZDA 5C18A 2O5JD 3FKIA 2PNWA 1CZ5A 3GTMA 3GTOA 3GTPA 4D7ZB 1TWGA 2WAQA 2KQAA 4FG4A 1OA9A 3QQ8A 4L48A 4GA6A 4C2MA 1AA6A 1BW4A 1TWHA 5FTKA 1PQEA 1G8JA 3O5AA 1H0HA 4NOHA 4JCWA 4KDLA 1PT1A 3X2PA 3GTKA 1K83A 3HKZA 2NYAA 2BH0A 2JIOA 1PQHA 4RV0A 2WB1A 3SULA 1I50A 4DMRA 4ENGA 3HU2A 3X2MA 2YU9A 4CS0A 2JA5A 2V45A 1SIWA 1H5NA 1EU1A 1UHDA 1YNND 1YNJD 4JS7A 1HD5A 1G8KA 2JIMA 5GLFA 1I3QA 1Y5IA 5DYIA 2PJJA 2JA7A 3QC8A 3GTJA 3QWZA 1UHEA 2CW0D 2PMZA 3CQZA 4QIWA 3HU1A 5GLYA 5FTLA 5GLXA 2HCZX 3ML1A 4KODA 4JP7A 4CRYG 1CZ4A 1Q16A 3OUGA 3X2OA 2PJHB 1BW3A 1VC3B 2VPZA 1WCMA 3SUKA 4FERA 5EPPA 1R27A 3X2KA 3HU3A 1DMRA 1TMOA 1TWAA 1TWFA 1L8FA 2ENGA 3D30A 1R9TA 5C1BA 2A68D 2VPYA
chains in the Genus database with same CATH topology
3CF2A 3TM7B 3TIWA 2KI8A 1SFOA 1FDIA 2DMRA 2V3VA 1PYUB 1E32A 2R7ZA 1CR5A 2GAEA 5FTNA 2R92A 3H0GA 5FTJA 1SMYD 1KQFA 1Y1VA 3GTQA 2E2HA 2IV2X 2A69D 2VPWA 2E2IA 2EEOB 1TWCA 1IW7D 4AYBA 2NAPA 4AONB 3GTGA 4GA5A 5DYGA 4AAYA 1E5VA 1PQFA 2BE5D 5T5MD 2C45A 1S3SA 2JA6A 3DMRA 1KQGA 2PI8A 2VPXA 1QDNA 2JIQA 3PLXB 5T5ID 2VUMA 1YLEA 3IR7A 2B63A 1ZYRD 5FTMA 1OGYA 1AW8B 1WLFA 2AE0X 2PICA 1PPYA 4CRZA 3IR5A 2JIPA 3GTLA 1FDOA 2E7ZA 3CZBA 2Y0SA 1PYQA 2NVYA 1DMSA 3IR6A 1ZC1A 2R93A 2A6ED 1QCSA 1E60A 4KLNA 4KDIA 2JIRA 2A6HD 5B6CA 1Y4ZA 1Y1WA 1R7RA 2G6GA 2G5DA 2NVXA 1E18A 1E61A 2YUJA 4KO8A 1PT0A 4AOKB 3QQ7A 4AZDA 5C18A 2O5JD 3FKIA 2PNWA 1CZ5A 3GTMA 3GTOA 3GTPA 4D7ZB 1TWGA 2WAQA 3QQ8A 4GA6A 4C2MA 1AA6A 1TWHA 5FTKA 1PQEA 1G8JA 3O5AA 1H0HA 4NOHA 4KDLA 1PT1A 3GTKA 1K83A 3HKZA 2NYAA 2JIOA 1PQHA 4RV0A 2WB1A 1I50A 4DMRA 3HU2A 2YU9A 4CS0A 2JA5A 2V45A 1SIWA 1H5NA 1EU1A 1UHDA 1YNND 1YNJD 1I3QA 1G8KA 2JIMA 5GLFA 2JA7A 1Y5IA 5DYIA 2PJJA 3QC8A 3GTJA 3QWZA 1UHEA 2CW0D 2PMZA 3CQZA 4QIWA 3HU1A 5FTLA 3ML1A 4KODA 4CRYG 1CZ4A 1Q16A 3OUGA 2PJHB 1VC3B 2VPZA 1WCMA 5EPPA 1R27A 3HU3A 1DMRA 1TMOA 1TWAA 1TWFA 1R9TA 5C1BA 2A68D 2VPYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CF2 A;  3TM7 B;  3TIW A;  2KI8 A;  1SFO A;  1FDI A;  2DMR A;  2V3V A;  1PYU B;  1E32 A;  2R7Z A;  1CR5 A;  5FTN A;  2R92 A;  3H0G A;  5FTJ A;  1KQF A;  1Y1V A;  3GTQ A;  2E2H A;  2IV2 X;  2VPW A;  2E2I A;  2EEO B;  1TWC A;  1IW7 D;  4AYB A;  2NAP A;  4AON B;  3GTG A;  4GA5 A;  5DYG A;  4AAY A;  1E5V A;  1PQF A;  5T5M D;  2C45 A;  1S3S A;  2JA6 A;  3DMR A;  1KQG A;  2VPX A;  1QDN A;  2JIQ A;  3PLX B;  5T5I D;  2VUM A;  1YLE A;  3IR7 A;  2B63 A;  5FTM A;  1OGY A;  1AW8 B;  1WLF A;  1PPY A;  4CRZ A;  3IR5 A;  2JIP A;  3GTL A;  1FDO A;  2E7Z A;  2Y0S A;  1PYQ A;  2NVY A;  1DMS A;  3IR6 A;  2R93 A;  1QCS A;  1E60 A;  4KLN A;  4KDI A;  2JIR A;  5B6C A;  1Y4Z A;  1Y1W A;  1R7R A;  2NVX A;  1E18 A;  1E61 A;  4KO8 A;  1PT0 A;  4AOK B;  3QQ7 A;  4AZD A;  5C18 A;  1CZ5 A;  3FKI A;  3GTM A;  3GTO A;  3GTP A;  4D7Z B;  1TWG A;  2WAQ A;  3QQ8 A;  4GA6 A;  4C2M A;  1AA6 A;  1TWH A;  5FTK A;  1PQE A;  1G8J A;  3O5A A;  1H0H A;  4KDL A;  1PT1 A;  3GTK A;  1K83 A;  3HKZ A;  2NYA A;  2JIO A;  1PQH A;  4RV0 A;  2WB1 A;  1I50 A;  4DMR A;  3HU2 A;  2YU9 A;  4CS0 A;  2JA5 A;  2V45 A;  1SIW A;  1H5N A;  1EU1 A;  1UHD A;  1I3Q A;  1G8K A;  2JIM A;  5GLF A;  2JA7 A;  1Y5I A;  5DYI A;  3QC8 A;  3GTJ A;  3QWZ A;  1UHE A;  2PMZ A;  3CQZ A;  4QIW A;  5FTL A;  3HU1 A;  3ML1 A;  4KOD A;  4CRY G;  1CZ4 A;  1Q16 A;  3OUG A;  2PJH B;  1VC3 B;  2VPZ A;  1WCM A;  5EPP A;  1R27 A;  3HU3 A;  1DMR A;  1TMO A;  1TWA A;  1TWF A;  1R9T A;  5C1B A;  2VPY A; 
#chains in the Genus database with same CATH topology
 3CF2 A;  3TM7 B;  3TIW A;  2KI8 A;  1OA7 A;  1SFO A;  1FDI A;  2DMR A;  2V3V A;  1PYU B;  4FG2 A;  1E32 A;  2R7Z A;  1CR5 A;  2GAE A;  1N10 A;  5FTN A;  2R92 A;  3H0G A;  5FTJ A;  3X2L A;  1SMY D;  1KQF A;  1Y1V A;  3GTQ A;  2E2H A;  3X2H A;  2IV2 X;  2A69 D;  2VPW A;  5GM9 A;  2E2I A;  2EEO B;  1TWC A;  1IW7 D;  4AYB A;  2NAP A;  4AON B;  3GTG A;  4GA5 A;  5DYG A;  4AAY A;  1E5V A;  1PQF A;  2BE5 D;  5H4U A;  5T5M D;  3X2J A;  2C45 A;  1S3S A;  2JA6 A;  3DMR A;  1KQG A;  2PI8 A;  2VPX A;  4JJO A;  1QDN A;  2JIQ A;  3PLX B;  5T5I D;  2VUM A;  3X2I A;  1WC2 A;  1YLE A;  3IR7 A;  4AVR A;  2B63 A;  3SUJ A;  1ZYR D;  4JP6 A;  5FTM A;  3X2G A;  4ZM7 A;  3M3G A;  1AW8 B;  1OGY A;  1WLF A;  2AE0 X;  2PIC A;  3SUM A;  1PPY A;  4CRZ A;  3IR5 A;  2JIP A;  3GTL A;  1FDO A;  2E7Z A;  3CZB A;  2Y0S A;  3ENG A;  1PYQ A;  2NVY A;  3X2N A;  1DMS A;  3IR6 A;  1ZC1 A;  2R93 A;  4FFT A;  2A6E D;  1QCS A;  1E60 A;  4KLN A;  4KDI A;  2JIR A;  2A6H D;  5B6C A;  1Y4Z A;  1Y1W A;  1R7R A;  2G6G A;  2G5D A;  2NVX A;  1E18 A;  1E61 A;  2YUJ A;  4KO8 A;  1PT0 A;  4AOK B;  3QQ7 A;  4AZD A;  5C18 A;  2O5J D;  3FKI A;  2PNW A;  1CZ5 A;  3GTM A;  3GTO A;  3GTP A;  4D7Z B;  1TWG A;  2WAQ A;  2KQA A;  4FG4 A;  1OA9 A;  3QQ8 A;  4L48 A;  4GA6 A;  4C2M A;  1AA6 A;  1BW4 A;  1TWH A;  5FTK A;  1PQE A;  1G8J A;  3O5A A;  1H0H A;  4NOH A;  4JCW A;  4KDL A;  1PT1 A;  3X2P A;  3GTK A;  1K83 A;  3HKZ A;  2NYA A;  2BH0 A;  2JIO A;  1PQH A;  4RV0 A;  2WB1 A;  3SUL A;  1I50 A;  4DMR A;  4ENG A;  3HU2 A;  3X2M A;  2YU9 A;  4CS0 A;  2JA5 A;  2V45 A;  1SIW A;  1H5N A;  1EU1 A;  1UHD A;  1YNN D;  1YNJ D;  4JS7 A;  1HD5 A;  1G8K A;  2JIM A;  5GLF A;  1I3Q A;  1Y5I A;  5DYI A;  2PJJ A;  2JA7 A;  3QC8 A;  3GTJ A;  3QWZ A;  1UHE A;  2CW0 D;  2PMZ A;  3CQZ A;  4QIW A;  3HU1 A;  5GLY A;  5FTL A;  5GLX A;  2HCZ X;  3ML1 A;  4KOD A;  4JP7 A;  4CRY G;  1CZ4 A;  1Q16 A;  3OUG A;  3X2O A;  2PJH B;  1BW3 A;  1VC3 B;  2VPZ A;  1WCM A;  3SUK A;  4FER A;  5EPP A;  1R27 A;  3X2K A;  3HU3 A;  1DMR A;  1TMO A;  1TWA A;  1TWF A;  1L8F A;  2ENG A;  3D30 A;  1R9T A;  5C1B A;  2A68 D;  2VPY A; 
#chains in the Genus database with same CATH homology
 3CF2 A;  3TM7 B;  3TIW A;  2KI8 A;  1SFO A;  1FDI A;  2DMR A;  2V3V A;  1PYU B;  1E32 A;  2R7Z A;  1CR5 A;  2GAE A;  5FTN A;  2R92 A;  3H0G A;  5FTJ A;  1SMY D;  1KQF A;  1Y1V A;  3GTQ A;  2E2H A;  2IV2 X;  2A69 D;  2VPW A;  2E2I A;  2EEO B;  1TWC A;  1IW7 D;  4AYB A;  2NAP A;  4AON B;  3GTG A;  4GA5 A;  5DYG A;  4AAY A;  1E5V A;  1PQF A;  2BE5 D;  5T5M D;  2C45 A;  1S3S A;  2JA6 A;  3DMR A;  1KQG A;  2PI8 A;  2VPX A;  1QDN A;  2JIQ A;  3PLX B;  5T5I D;  2VUM A;  1YLE A;  3IR7 A;  2B63 A;  1ZYR D;  5FTM A;  1OGY A;  1AW8 B;  1WLF A;  2AE0 X;  2PIC A;  1PPY A;  4CRZ A;  3IR5 A;  2JIP A;  3GTL A;  1FDO A;  2E7Z A;  3CZB A;  2Y0S A;  1PYQ A;  2NVY A;  1DMS A;  3IR6 A;  1ZC1 A;  2R93 A;  2A6E D;  1QCS A;  1E60 A;  4KLN A;  4KDI A;  2JIR A;  2A6H D;  5B6C A;  1Y4Z A;  1Y1W A;  1R7R A;  2G6G A;  2G5D A;  2NVX A;  1E18 A;  1E61 A;  2YUJ A;  4KO8 A;  1PT0 A;  4AOK B;  3QQ7 A;  4AZD A;  5C18 A;  2O5J D;  3FKI A;  2PNW A;  1CZ5 A;  3GTM A;  3GTO A;  3GTP A;  4D7Z B;  1TWG A;  2WAQ A;  3QQ8 A;  4GA6 A;  4C2M A;  1AA6 A;  1TWH A;  5FTK A;  1PQE A;  1G8J A;  3O5A A;  1H0H A;  4NOH A;  4KDL A;  1PT1 A;  3GTK A;  1K83 A;  3HKZ A;  2NYA A;  2JIO A;  1PQH A;  4RV0 A;  2WB1 A;  1I50 A;  4DMR A;  3HU2 A;  2YU9 A;  4CS0 A;  2JA5 A;  2V45 A;  1SIW A;  1H5N A;  1EU1 A;  1UHD A;  1YNN D;  1YNJ D;  1I3Q A;  1G8K A;  2JIM A;  5GLF A;  2JA7 A;  1Y5I A;  5DYI A;  2PJJ A;  3QC8 A;  3GTJ A;  3QWZ A;  1UHE A;  2CW0 D;  2PMZ A;  3CQZ A;  4QIW A;  3HU1 A;  5FTL A;  3ML1 A;  4KOD A;  4CRY G;  1CZ4 A;  1Q16 A;  3OUG A;  2PJH B;  1VC3 B;  2VPZ A;  1WCM A;  5EPP A;  1R27 A;  3HU3 A;  1DMR A;  1TMO A;  1TWA A;  1TWF A;  1R9T A;  5C1B A;  2A68 D;  2VPY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...