3SUK | Genus

Total Genus 38

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	38
sequence length	124
structure length	124
Chain Sequence	GAVQLRFDNTYDNASGSMNTVACSTGANGLSQRFPTFGSVPTFPHIGASSDIGGFNSPACGNCYTISFTFQGVTRSINLVAIDHAGNGFNVAQAAMDELTNGNAVALGTIDVQSQQVARSVCGL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Unknown function
source organism	Moniliophthora perniciosa
publication title	Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization. pubmed doi rcsb
molecule keywords	Cerato-platanin-like protein
total genus	38
structure length	124
sequence length	124
chains with identical sequence	B
ec nomenclature
pdb deposition date	2011-07-11

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF07249	Cerato-platanin	Cerato-platanin

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.40.40.10	Mainly Beta	Beta Barrel	Barwin-like endoglucanases	RlpA-like domain	3sukA00

3X2LA 1L8FA 2GAEA 4JP7A 3X2NA 3CZBA 1OA9A 3ENGA 4FFTA 4FG2A 5H4UA 3X2GA 1BW3A 3SUKA 3SULA 3M3GA 2PNWA 3D30A 1OA7A 3X2KA 2PICA 2AE0X 4ZM7A 2PI8A 2BH0A 3X2PA 2HCZX 3SUJA 4AVRA 1N10A 4FG4A 3X2OA 2KQAA 2ENGA 1BW4A 4FERA 3X2MA 3X2JA 5GLYA 4JJOA 1WC2A 3SUMA 4ENGA 5GLXA 3X2IA 3X2HA 4JCWA 1HD5A 2PJJA 4JP6A 2G6GA 4L48A 5GM9A 4JS7A 2G5DA
chains in the Genus database with same CATH superfamily

1EU1A 2NVYA 1TMOA 4AAYA 5T5ID 3QQ7A 2JA5A 4CRZA 4RV0A 5GLFA 2VPYA 3HU3A 2A69D 1PQHA 3X2GA 5H4UA 2EEOB 2BE5D 3SUKA 3M3GA 3SULA 2JA7A 1YNND 3X2KA 1PT1A 2AE0X 1KQFA 4KO8A 5FTLA 2BH0A 3HKZA 4KDIA 1ZYRD 1N10A 1Y5IA 4FG4A 5T5MD 1BW4A 2ENGA 3X2MA 3X2JA 5GLYA 2JIOA 2KI8A 5B6CA 4AOKB 1E5VA 1PQFA 4JP6A 4NOHA 3IR6A 1R7RA 3GTOA 1WCMA 1DMSA 2G5DA 1PQEA 3X2LA 1YLEA 1E61A 1R9TA 1TWHA 5FTNA 1G8KA 1I50A 1AW8B 3CZBA 2R92A 1PT0A 3ENGA 4FFTA 4CRYG 2YUJA 1TWFA 1TWGA 3QQ8A 2Y0SA 1G8JA 1E18A 1OA7A 2CW0D 4GA5A 2E7ZA 2E2IA 2O5JD 4FERA 1YNJD 3GTQA 4C2MA 1PYQA 2DMRA 4JJOA 3TM7B 2VUMA 1IW7D 2A6HD 1SIWA 3X2HA 4JCWA 1HD5A 2PJJA 1KQGA 1Y1WA 2C45A 4L48A 1I3QA 1PYUB 5FTMA 1QCSA 3TIWA 2VPXA 2PJHB 1H5NA 3IR5A 2A68D 3FKIA 3QC8A 5FTKA 2PMZA 4JP7A 1OGYA 1ZC1A 2VPZA 3IR7A 2VPWA 3DMRA 3CQZA 2NYAA 1OA9A 1E60A 1CZ4A 2WAQA 4FG2A 3GTJA 1UHDA 4AYBA 1BW3A 2PNWA 1VC3B 2V45A 4KODA 1TWAA 3GTKA 4ZM7A 2B63A 2PI8A 3X2PA 3GTPA 3SUJA 4DMRA 4KDLA 2WB1A 2KQAA 2JIQA 4KLNA 3GTMA 3SUMA 4ENGA 5GLXA 3GTGA 2R93A 1UHEA 4AONB 4AZDA 5C18A 3ML1A 5EPPA 2IV2X 4QIWA 2G6GA 2A6ED 1FDOA 2V3VA 5FTJA 3X2NA 5GM9A 4JS7A 2JIMA 2E2HA 1Y4ZA 1CZ5A 1R27A 1SFOA 1L8FA 1S3SA 5DYIA 2GAEA 3PLXB 5DYGA 1K83A 5C1BA 4GA6A 1WLFA 3HU2A 2R7ZA 1CR5A 3O5AA 1H0HA 1E32A 1TWCA 1FDIA 3HU1A 3D30A 2NAPA 2PICA 1QDNA 1SMYD 3H0GA 3CF2A 3QWZA 4AVRA 2HCZX 4CS0A 1AA6A 3X2OA 1DMRA 2JIPA 3OUGA 1PPYA 2NVXA 3GTLA 2JA6A 1WC2A 1Y1VA 3X2IA 2JIRA 2YU9A 1Q16A 4D7ZB
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3X2L A;  1L8F A;  2GAE A;  4JP7 A;  3X2N A;  3CZB A;  1OA9 A;  3ENG A;  4FFT A;  4FG2 A;  5H4U A;  3X2G A;  1BW3 A;  3SUK A;  3SUL A;  3M3G A;  2PNW A;  3D30 A;  1OA7 A;  3X2K A;  2PIC A;  2AE0 X;  4ZM7 A;  2PI8 A;  2BH0 A;  3X2P A;  2HCZ X;  3SUJ A;  4AVR A;  1N10 A;  4FG4 A;  3X2O A;  2KQA A;  2ENG A;  1BW4 A;  4FER A;  3X2M A;  3X2J A;  5GLY A;  4JJO A;  1WC2 A;  3SUM A;  4ENG A;  5GLX A;  3X2I A;  3X2H A;  4JCW A;  1HD5 A;  2PJJ A;  4JP6 A;  2G6G A;  4L48 A;  5GM9 A;  4JS7 A;  2G5D A; 
#chains in the Genus database with same CATH topology
 1EU1 A;  2NVY A;  1TMO A;  4AAY A;  5T5I D;  3QQ7 A;  2JA5 A;  4CRZ A;  4RV0 A;  5GLF A;  2VPY A;  3HU3 A;  2A69 D;  1PQH A;  3X2G A;  5H4U A;  2EEO B;  2BE5 D;  3SUK A;  3M3G A;  3SUL A;  2JA7 A;  1YNN D;  3X2K A;  1PT1 A;  2AE0 X;  1KQF A;  4KO8 A;  5FTL A;  2BH0 A;  3HKZ A;  4KDI A;  1ZYR D;  1N10 A;  1Y5I A;  4FG4 A;  5T5M D;  1BW4 A;  2ENG A;  3X2M A;  3X2J A;  5GLY A;  2JIO A;  2KI8 A;  5B6C A;  4AOK B;  1E5V A;  1PQF A;  4JP6 A;  4NOH A;  3IR6 A;  1R7R A;  3GTO A;  1WCM A;  1DMS A;  2G5D A;  1PQE A;  3X2L A;  1YLE A;  1E61 A;  1R9T A;  1TWH A;  5FTN A;  1G8K A;  1I50 A;  1AW8 B;  3CZB A;  2R92 A;  1PT0 A;  3ENG A;  4FFT A;  4CRY G;  2YUJ A;  1TWF A;  1TWG A;  3QQ8 A;  2Y0S A;  1G8J A;  1E18 A;  1OA7 A;  2CW0 D;  4GA5 A;  2E7Z A;  2E2I A;  2O5J D;  4FER A;  1YNJ D;  3GTQ A;  4C2M A;  1PYQ A;  2DMR A;  4JJO A;  3TM7 B;  2VUM A;  1IW7 D;  2A6H D;  1SIW A;  3X2H A;  4JCW A;  1HD5 A;  2PJJ A;  1KQG A;  1Y1W A;  2C45 A;  4L48 A;  1I3Q A;  1PYU B;  5FTM A;  1QCS A;  3TIW A;  2VPX A;  2PJH B;  1H5N A;  3IR5 A;  2A68 D;  3FKI A;  3QC8 A;  5FTK A;  2PMZ A;  4JP7 A;  1OGY A;  1ZC1 A;  2VPZ A;  3IR7 A;  2VPW A;  3DMR A;  3CQZ A;  2NYA A;  1OA9 A;  1E60 A;  1CZ4 A;  2WAQ A;  4FG2 A;  3GTJ A;  1UHD A;  4AYB A;  1BW3 A;  2PNW A;  1VC3 B;  2V45 A;  4KOD A;  1TWA A;  3GTK A;  4ZM7 A;  2B63 A;  2PI8 A;  3X2P A;  3GTP A;  3SUJ A;  4DMR A;  4KDL A;  2WB1 A;  2KQA A;  2JIQ A;  4KLN A;  3GTM A;  3SUM A;  4ENG A;  5GLX A;  3GTG A;  2R93 A;  1UHE A;  4AON B;  4AZD A;  5C18 A;  3ML1 A;  5EPP A;  2IV2 X;  4QIW A;  2G6G A;  2A6E D;  1FDO A;  2V3V A;  5FTJ A;  3X2N A;  5GM9 A;  4JS7 A;  2JIM A;  2E2H A;  1Y4Z A;  1CZ5 A;  1R27 A;  1SFO A;  1L8F A;  1S3S A;  5DYI A;  2GAE A;  3PLX B;  5DYG A;  1K83 A;  5C1B A;  4GA6 A;  1WLF A;  3HU2 A;  2R7Z A;  1CR5 A;  3O5A A;  1H0H A;  1E32 A;  1TWC A;  1FDI A;  3HU1 A;  3D30 A;  2NAP A;  2PIC A;  1QDN A;  1SMY D;  3H0G A;  3CF2 A;  3QWZ A;  4AVR A;  2HCZ X;  4CS0 A;  1AA6 A;  3X2O A;  1DMR A;  2JIP A;  3OUG A;  1PPY A;  2NVX A;  3GTL A;  2JA6 A;  1WC2 A;  1Y1V A;  3X2I A;  2JIR A;  2YU9 A;  1Q16 A;  4D7Z B; 
#chains in the Genus database with same CATH homology
 3X2L A;  1L8F A;  2GAE A;  4JP7 A;  3X2N A;  3CZB A;  1OA9 A;  3ENG A;  4FFT A;  4FG2 A;  5H4U A;  3X2G A;  1BW3 A;  3SUK A;  3SUL A;  3M3G A;  2PNW A;  3D30 A;  1OA7 A;  3X2K A;  2PIC A;  2AE0 X;  4ZM7 A;  2PI8 A;  2BH0 A;  3X2P A;  2HCZ X;  3SUJ A;  4AVR A;  1N10 A;  4FG4 A;  3X2O A;  2KQA A;  2ENG A;  1BW4 A;  4FER A;  3X2M A;  3X2J A;  5GLY A;  4JJO A;  1WC2 A;  3SUM A;  4ENG A;  5GLX A;  3X2I A;  3X2H A;  4JCW A;  1HD5 A;  2PJJ A;  4JP6 A;  2G6G A;  4L48 A;  5GM9 A;  4JS7 A;  2G5D A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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3SUKA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations