3TM7B

Processed aspartate decarboxylase mutant with asn72 mutated to ala
Total Genus 22

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
94
structure length
94
Chain Sequence
SCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVAGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (26-29)AH1 (30-36)S2 (42-48)TII1 (39-42)TIV1 (48-51)TI1 (49-52)EMPTYS3 (54-62)TII3 (80-83)S5 (85-89)TII2 (63-66)3H1 (73-77)S4 (69-71)Updating...
connected with : NaN
molecule tags Lyase
source organism Escherichia coli
publication title Structure of Escherichia coli aspartate alpha-decarboxylase Asn72Ala: probing the role of Asn72 in pyruvoyl cofactor formation
pubmed doi rcsb
molecule keywords Aspartate 1-decarboxylase beta chain
total genus 22
structure length 94
sequence length 94
chains with identical sequence D
ec nomenclature ec 4.1.1.11: Aspartate 1-decarboxylase.
pdb deposition date 2011-08-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.20 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 3tm7B00
5B6CA 1Q16A 3OUGA 1R9TA 2C45A 3QQ7A 1E61A 2R7ZA 1FDOA 2JA7A 1I3QA 1PT1A 1KQFA 2JIOA 5FTNA 2NYAA 1UHEA 3PLXB 4CRYG 5DYGA 2E2HA 4AOKB 1EU1A 2NVXA 1G8JA 5GLFA 1Y1WA 2VPXA 1OGYA 1S3SA 1R27A 1TWCA 2WAQA 1G8KA 2PMZA 1TMOA 4KLNA 2DMRA 2Y0SA 4AZDA 3QC8A 1TWFA 1Y1VA 2JIMA 3HU3A 1PYUB 4GA5A 3GTOA 5FTLA 1PQFA 2WB1A 5FTMA 3QQ8A 5C18A 2VPZA 1YLEA 1CZ4A 3GTMA 1PYQA 1FDIA 1K83A 2NVYA 2VPWA 4CRZA 3HKZA 4AONB 2KI8A 4QIWA 2B63A 2JIQA 3FKIA 3H0GA 1SFOA 4D7ZB 1DMSA 4RV0A 4DMRA 4AAYA 2JA6A 1VC3B 4AYBA 4GA6A 4KODA 3GTPA 1R7RA 1WCMA 3ML1A 3CQZA 1QDNA 1SIWA 3GTJA 2VUMA 3HU1A 3IR7A 1H5NA 1H0HA 1TWHA 1AW8B 4C2MA 1TWAA 3HU2A 2PJHB 4KDIA 5EPPA 2JA5A 2JIPA 1CZ5A 1QCSA 2E2IA 1E32A 3IR6A 5T5MD 1WLFA 2V3VA 4KDLA 5T5ID 5DYIA 1I50A 2JIRA 2V45A 2R93A 1E18A 1IW7D 3O5AA 1UHDA 3GTLA 4KO8A 1E60A 1PPYA 1Y4ZA 3TIWA 2E7ZA 1DMRA 1CR5A 2NAPA 5FTJA 1E5VA 1TWGA 4CS0A 3CF2A 3GTGA 1AA6A 2VPYA 2YU9A 1PT0A 3TM7B 1PQEA 3GTQA 1Y5IA 2EEOB 3QWZA 5C1BA 2R92A 5FTKA 2IV2X 1KQGA 3GTKA 3IR5A 1PQHA 3DMRA
chains in the Genus database with same CATH superfamily
2G5DA 1Q16A 5B6CA 3OUGA 3CZBA 4FG2A 3SUKA 1R9TA 2C45A 3QQ7A 1E61A 3X2HA 2R7ZA 1FDOA 2JA7A 3X2JA 1I3QA 1PT1A 1KQFA 2JIOA 5GLYA 5FTNA 2NYAA 1UHEA 2PI8A 2PJJA 4FG4A 3PLXB 4CRYG 5DYGA 2E2HA 1YNND 4AOKB 4ENGA 1EU1A 3D30A 2NVXA 1G8JA 2HCZX 5GLFA 1Y1WA 2VPXA 2CW0D 1WC2A 1OGYA 1S3SA 1R27A 1TWCA 3X2PA 2WAQA 1G8KA 2PMZA 1TMOA 4AVRA 4KLNA 2DMRA 2A68D 2G6GA 2Y0SA 4AZDA 3QC8A 1TWFA 1Y1VA 2YUJA 2JIMA 3M3GA 2A6HD 1N10A 3HU3A 3X2KA 1PYUB 4GA5A 2O5JD 3GTOA 1BW3A 3SUJA 5FTLA 1PQFA 2WB1A 4JCWA 5FTMA 3QQ8A 5C18A 2VPZA 1YLEA 1CZ4A 3GTMA 1PYQA 4FFTA 2AE0X 1FDIA 2A69D 5GLXA 3X2LA 1K83A 4JS7A 3SULA 2PICA 2NVYA 2VPWA 4CRZA 3HKZA 4AONB 2KI8A 4QIWA 2B63A 3X2OA 2JIQA 3FKIA 3H0GA 1SFOA 4D7ZB 1DMSA 4RV0A 3SUMA 4DMRA 4AAYA 2JA6A 1VC3B 4AYBA 4NOHA 4GA6A 4KODA 3GTPA 1R7RA 1WCMA 3ML1A 5H4UA 3CQZA 4JP7A 1YNJD 1QDNA 3X2NA 1SIWA 3GTJA 2VUMA 3HU1A 3IR7A 1H5NA 1H0HA 1TWHA 3X2IA 1AW8B 4C2MA 3X2MA 1OA9A 1SMYD 1TWAA 3HU2A 2PJHB 4KDIA 5EPPA 2JA5A 2JIPA 1CZ5A 1QCSA 2E2IA 1E32A 3IR6A 5T5MD 1WLFA 3ENGA 2V3VA 4KDLA 5T5ID 5DYIA 1I50A 2JIRA 2V45A 1ZYRD 4JJOA 2R93A 1ZC1A 1E18A 1IW7D 3O5AA 2A6ED 1UHDA 1OA7A 3GTLA 4KO8A 4FERA 1E60A 1PPYA 1Y4ZA 3TIWA 2E7ZA 4ZM7A 4JP6A 1DMRA 1CR5A 2NAPA 1L8FA 5FTJA 1E5VA 1TWGA 5GM9A 4CS0A 1BW4A 3CF2A 2ENGA 3GTGA 3X2GA 1AA6A 2VPYA 2YU9A 2PNWA 1PT0A 3TM7B 1PQEA 2GAEA 2BE5D 3GTQA 1HD5A 2KQAA 4L48A 2BH0A 1Y5IA 2EEOB 3QWZA 5C1BA 2R92A 5FTKA 2IV2X 1KQGA 3GTKA 3IR5A 1PQHA 3DMRA
chains in the Genus database with same CATH topology
2G5DA 1Q16A 5B6CA 3OUGA 3CZBA 1R9TA 2C45A 3QQ7A 1E61A 2R7ZA 1FDOA 2JA7A 1I3QA 1PT1A 1KQFA 2JIOA 5FTNA 2NYAA 1UHEA 2PI8A 2PJJA 3PLXB 4CRYG 5DYGA 2E2HA 1YNND 4AOKB 1EU1A 2NVXA 1G8JA 5GLFA 1Y1WA 2VPXA 2CW0D 1OGYA 1S3SA 1R27A 1TWCA 2WAQA 1G8KA 2PMZA 1TMOA 4KLNA 2DMRA 2A68D 2G6GA 2Y0SA 4AZDA 3QC8A 1TWFA 1Y1VA 2YUJA 2JIMA 2A6HD 3HU3A 1PYUB 4GA5A 2O5JD 3GTOA 5FTLA 1PQFA 2WB1A 5FTMA 3QQ8A 5C18A 2VPZA 1YLEA 1CZ4A 3GTMA 1PYQA 2AE0X 1FDIA 2A69D 1K83A 2PICA 2NVYA 2VPWA 4CRZA 3HKZA 4AONB 2KI8A 4QIWA 2B63A 2JIQA 3FKIA 3H0GA 1SFOA 4D7ZB 1DMSA 4RV0A 4DMRA 4AAYA 2JA6A 1VC3B 4AYBA 4NOHA 4GA6A 4KODA 3GTPA 1R7RA 1WCMA 3ML1A 3CQZA 1YNJD 1QDNA 1SIWA 3GTJA 2VUMA 3HU1A 3IR7A 1H5NA 1H0HA 1TWHA 1AW8B 4C2MA 1SMYD 1TWAA 3HU2A 2PJHB 4KDIA 5EPPA 2JA5A 2JIPA 1CZ5A 1QCSA 2E2IA 1E32A 3IR6A 5T5MD 1WLFA 2V3VA 4KDLA 5T5ID 5DYIA 1I50A 2JIRA 2V45A 1ZYRD 2R93A 1ZC1A 1E18A 1IW7D 3O5AA 2A6ED 1UHDA 3GTLA 4KO8A 1E60A 1PPYA 1Y4ZA 3TIWA 2E7ZA 1DMRA 1CR5A 2NAPA 5FTJA 1E5VA 1TWGA 4CS0A 3CF2A 3GTGA 1AA6A 2VPYA 2YU9A 2PNWA 1PT0A 3TM7B 1PQEA 2GAEA 2BE5D 3GTQA 1Y5IA 2EEOB 3QWZA 5C1BA 2R92A 5FTKA 2IV2X 1KQGA 3GTKA 3IR5A 1PQHA 3DMRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5B6C A;  1Q16 A;  3OUG A;  1R9T A;  2C45 A;  3QQ7 A;  1E61 A;  2R7Z A;  1FDO A;  2JA7 A;  1I3Q A;  1PT1 A;  1KQF A;  2JIO A;  5FTN A;  2NYA A;  1UHE A;  3PLX B;  4CRY G;  5DYG A;  2E2H A;  4AOK B;  1EU1 A;  2NVX A;  1G8J A;  5GLF A;  1Y1W A;  2VPX A;  1OGY A;  1S3S A;  1R27 A;  1TWC A;  2WAQ A;  1G8K A;  2PMZ A;  1TMO A;  4KLN A;  2DMR A;  2Y0S A;  4AZD A;  3QC8 A;  1TWF A;  1Y1V A;  2JIM A;  3HU3 A;  1PYU B;  4GA5 A;  3GTO A;  5FTL A;  1PQF A;  2WB1 A;  5FTM A;  3QQ8 A;  5C18 A;  2VPZ A;  1YLE A;  1CZ4 A;  3GTM A;  1PYQ A;  1FDI A;  1K83 A;  2NVY A;  2VPW A;  4CRZ A;  3HKZ A;  4AON B;  2KI8 A;  4QIW A;  2B63 A;  2JIQ A;  3FKI A;  3H0G A;  1SFO A;  4D7Z B;  1DMS A;  4RV0 A;  4DMR A;  4AAY A;  2JA6 A;  1VC3 B;  4AYB A;  4GA6 A;  4KOD A;  3GTP A;  1R7R A;  1WCM A;  3ML1 A;  3CQZ A;  1QDN A;  1SIW A;  3GTJ A;  2VUM A;  3HU1 A;  3IR7 A;  1H5N A;  1H0H A;  1TWH A;  1AW8 B;  4C2M A;  1TWA A;  3HU2 A;  2PJH B;  4KDI A;  5EPP A;  2JA5 A;  2JIP A;  1CZ5 A;  1QCS A;  2E2I A;  1E32 A;  3IR6 A;  5T5M D;  1WLF A;  2V3V A;  4KDL A;  5T5I D;  5DYI A;  1I50 A;  2JIR A;  2V45 A;  2R93 A;  1E18 A;  1IW7 D;  3O5A A;  1UHD A;  3GTL A;  4KO8 A;  1E60 A;  1PPY A;  1Y4Z A;  3TIW A;  2E7Z A;  1DMR A;  1CR5 A;  2NAP A;  5FTJ A;  1E5V A;  1TWG A;  4CS0 A;  3CF2 A;  3GTG A;  1AA6 A;  2VPY A;  2YU9 A;  1PT0 A;  3TM7 B;  1PQE A;  3GTQ A;  1Y5I A;  2EEO B;  3QWZ A;  5C1B A;  2R92 A;  5FTK A;  2IV2 X;  1KQG A;  3GTK A;  3IR5 A;  1PQH A;  3DMR A; 
#chains in the Genus database with same CATH topology
 2G5D A;  1Q16 A;  5B6C A;  3OUG A;  3CZB A;  4FG2 A;  3SUK A;  1R9T A;  2C45 A;  3QQ7 A;  1E61 A;  3X2H A;  2R7Z A;  1FDO A;  2JA7 A;  3X2J A;  1I3Q A;  1PT1 A;  1KQF A;  2JIO A;  5GLY A;  5FTN A;  2NYA A;  1UHE A;  2PI8 A;  2PJJ A;  4FG4 A;  3PLX B;  4CRY G;  5DYG A;  2E2H A;  1YNN D;  4AOK B;  4ENG A;  1EU1 A;  3D30 A;  2NVX A;  1G8J A;  2HCZ X;  5GLF A;  1Y1W A;  2VPX A;  2CW0 D;  1WC2 A;  1OGY A;  1S3S A;  1R27 A;  1TWC A;  3X2P A;  2WAQ A;  1G8K A;  2PMZ A;  1TMO A;  4AVR A;  4KLN A;  2DMR A;  2A68 D;  2G6G A;  2Y0S A;  4AZD A;  3QC8 A;  1TWF A;  1Y1V A;  2YUJ A;  2JIM A;  3M3G A;  2A6H D;  1N10 A;  3HU3 A;  3X2K A;  1PYU B;  4GA5 A;  2O5J D;  3GTO A;  1BW3 A;  3SUJ A;  5FTL A;  1PQF A;  2WB1 A;  4JCW A;  5FTM A;  3QQ8 A;  5C18 A;  2VPZ A;  1YLE A;  1CZ4 A;  3GTM A;  1PYQ A;  4FFT A;  2AE0 X;  1FDI A;  2A69 D;  5GLX A;  3X2L A;  1K83 A;  4JS7 A;  3SUL A;  2PIC A;  2NVY A;  2VPW A;  4CRZ A;  3HKZ A;  4AON B;  2KI8 A;  4QIW A;  2B63 A;  3X2O A;  2JIQ A;  3FKI A;  3H0G A;  1SFO A;  4D7Z B;  1DMS A;  4RV0 A;  3SUM A;  4DMR A;  4AAY A;  2JA6 A;  1VC3 B;  4AYB A;  4NOH A;  4GA6 A;  4KOD A;  3GTP A;  1R7R A;  1WCM A;  3ML1 A;  5H4U A;  3CQZ A;  4JP7 A;  1YNJ D;  1QDN A;  3X2N A;  1SIW A;  3GTJ A;  2VUM A;  3HU1 A;  3IR7 A;  1H5N A;  1H0H A;  1TWH A;  3X2I A;  1AW8 B;  4C2M A;  3X2M A;  1OA9 A;  1SMY D;  1TWA A;  3HU2 A;  2PJH B;  4KDI A;  5EPP A;  2JA5 A;  2JIP A;  1CZ5 A;  1QCS A;  2E2I A;  1E32 A;  3IR6 A;  5T5M D;  1WLF A;  3ENG A;  2V3V A;  4KDL A;  5T5I D;  5DYI A;  1I50 A;  2JIR A;  2V45 A;  1ZYR D;  4JJO A;  2R93 A;  1ZC1 A;  1E18 A;  1IW7 D;  3O5A A;  2A6E D;  1UHD A;  1OA7 A;  3GTL A;  4KO8 A;  4FER A;  1E60 A;  1PPY A;  1Y4Z A;  3TIW A;  2E7Z A;  4ZM7 A;  4JP6 A;  1DMR A;  1CR5 A;  2NAP A;  1L8F A;  5FTJ A;  1E5V A;  1TWG A;  5GM9 A;  4CS0 A;  1BW4 A;  3CF2 A;  2ENG A;  3GTG A;  3X2G A;  1AA6 A;  2VPY A;  2YU9 A;  2PNW A;  1PT0 A;  3TM7 B;  1PQE A;  2GAE A;  2BE5 D;  3GTQ A;  1HD5 A;  2KQA A;  4L48 A;  2BH0 A;  1Y5I A;  2EEO B;  3QWZ A;  5C1B A;  2R92 A;  5FTK A;  2IV2 X;  1KQG A;  3GTK A;  3IR5 A;  1PQH A;  3DMR A; 
#chains in the Genus database with same CATH homology
 2G5D A;  1Q16 A;  5B6C A;  3OUG A;  3CZB A;  1R9T A;  2C45 A;  3QQ7 A;  1E61 A;  2R7Z A;  1FDO A;  2JA7 A;  1I3Q A;  1PT1 A;  1KQF A;  2JIO A;  5FTN A;  2NYA A;  1UHE A;  2PI8 A;  2PJJ A;  3PLX B;  4CRY G;  5DYG A;  2E2H A;  1YNN D;  4AOK B;  1EU1 A;  2NVX A;  1G8J A;  5GLF A;  1Y1W A;  2VPX A;  2CW0 D;  1OGY A;  1S3S A;  1R27 A;  1TWC A;  2WAQ A;  1G8K A;  2PMZ A;  1TMO A;  4KLN A;  2DMR A;  2A68 D;  2G6G A;  2Y0S A;  4AZD A;  3QC8 A;  1TWF A;  1Y1V A;  2YUJ A;  2JIM A;  2A6H D;  3HU3 A;  1PYU B;  4GA5 A;  2O5J D;  3GTO A;  5FTL A;  1PQF A;  2WB1 A;  5FTM A;  3QQ8 A;  5C18 A;  2VPZ A;  1YLE A;  1CZ4 A;  3GTM A;  1PYQ A;  2AE0 X;  1FDI A;  2A69 D;  1K83 A;  2PIC A;  2NVY A;  2VPW A;  4CRZ A;  3HKZ A;  4AON B;  2KI8 A;  4QIW A;  2B63 A;  2JIQ A;  3FKI A;  3H0G A;  1SFO A;  4D7Z B;  1DMS A;  4RV0 A;  4DMR A;  4AAY A;  2JA6 A;  1VC3 B;  4AYB A;  4NOH A;  4GA6 A;  4KOD A;  3GTP A;  1R7R A;  1WCM A;  3ML1 A;  3CQZ A;  1YNJ D;  1QDN A;  1SIW A;  3GTJ A;  2VUM A;  3HU1 A;  3IR7 A;  1H5N A;  1H0H A;  1TWH A;  1AW8 B;  4C2M A;  1SMY D;  1TWA A;  3HU2 A;  2PJH B;  4KDI A;  5EPP A;  2JA5 A;  2JIP A;  1CZ5 A;  1QCS A;  2E2I A;  1E32 A;  3IR6 A;  5T5M D;  1WLF A;  2V3V A;  4KDL A;  5T5I D;  5DYI A;  1I50 A;  2JIR A;  2V45 A;  1ZYR D;  2R93 A;  1ZC1 A;  1E18 A;  1IW7 D;  3O5A A;  2A6E D;  1UHD A;  3GTL A;  4KO8 A;  1E60 A;  1PPY A;  1Y4Z A;  3TIW A;  2E7Z A;  1DMR A;  1CR5 A;  2NAP A;  5FTJ A;  1E5V A;  1TWG A;  4CS0 A;  3CF2 A;  3GTG A;  1AA6 A;  2VPY A;  2YU9 A;  2PNW A;  1PT0 A;  3TM7 B;  1PQE A;  2GAE A;  2BE5 D;  3GTQ A;  1Y5I A;  2EEO B;  3QWZ A;  5C1B A;  2R92 A;  5FTK A;  2IV2 X;  1KQG A;  3GTK A;  3IR5 A;  1PQH A;  3DMR A; 
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