3X2HA

X-ray structure of pccel45a n92d with cellopentaose at 95k.
Total Genus 48

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TII1 (1-4)TIV1 (2-5)EMPTYS6 (133-140)TVIII1 (8-11)S1 (10-18)TI7 (105-108)S4 (79-87)TIV6 (116-119)S2 (34-38)TIV2 (21-24)TI1 (24-27)AH1 (39-42)TVIII3 (88-91)TI2 (51-54)TII2 (45-48)TIV7 (166-169)3H2 (160-163)S3 (56-64)TII3 (53-56)3H1 (142-144)TI3 (65-68)TII5 (127-130)TIV4 (92-95)TI4 (68-71)TI5 (93-96)TII4 (89-92)TIV3 (90-93)TIV5 (94-97)TI6 (99-102)TI8 (117-120)TII6 (154-157)TIV8 (170-173)AH2 (121-125)S5 (111-116)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
molecule keywords Endoglucanase V-like protein
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2hA00
1BW4A 2BH0A 4ZM7A 1HD5A 2G6GA 3D30A 3X2GA 5GM9A 1WC2A 3X2PA 3M3GA 1OA9A 2HCZX 4JCWA 3ENGA 3X2IA 5GLYA 4JJOA 4JS7A 1OA7A 4AVRA 3X2JA 1BW3A 2GAEA 3X2HA 2G5DA 4L48A 2ENGA 2PICA 4JP6A 5GLXA 2PNWA 5H4UA 1N10A 3X2KA 4ENGA 3SUKA 4FG4A 3SUMA 3X2NA 2AE0X 4FERA 1L8FA 4FFTA 3SUJA 3SULA 3X2MA 3X2OA 2PJJA 3CZBA 2KQAA 4JP7A 4FG2A 3X2LA 2PI8A
chains in the Genus database with same CATH superfamily
2JIRA 3TIWA 2C45A 3IR5A 3IR6A 2G6GA 3GTGA 1Y1WA 2E7ZA 2HCZX 5C1BA 4JCWA 1S3SA 1PT1A 2EEOB 4KDLA 5T5MD 1PT0A 3OUGA 4GA6A 1IW7D 1Q16A 3FKIA 2IV2X 2NYAA 1Y4ZA 3QWZA 5FTKA 2E2HA 1CR5A 1CZ4A 2ENGA 2PICA 3O5AA 4GA5A 4ENGA 1N10A 3SUKA 3HU3A 4FG4A 3GTLA 4FFTA 1I3QA 1E60A 4C2MA 1TMOA 3TM7B 2A6ED 2NVYA 3X2MA 3CZBA 2KQAA 1WCMA 2E2IA 3GTOA 3QC8A 2R92A 2PI8A 5T5ID 2R7ZA 4KO8A 1TWAA 2R93A 1QDNA 3HKZA 2B63A 1E18A 3QQ7A 1AA6A 1UHEA 1E32A 5C18A 5GLYA 1TWHA 5FTNA 4JS7A 2PJHB 3GTJA 2JA6A 1TWCA 4DMRA 2JIOA 1SIWA 4AVRA 1TWGA 1G8JA 1Y1VA 2GAEA 1KQGA 2NVXA 4CS0A 2G5DA 2KI8A 3CF2A 4JP6A 1K83A 2A6HD 2VPWA 1OGYA 4CRYG 1L8FA 5GLFA 1PQFA 1E61A 3ML1A 4KODA 5DYGA 1CZ5A 2VPYA 3X2KA 4AZDA 1BW4A 1PYUB 1UHDA 1PQEA 1DMSA 1HD5A 3D30A 5EPPA 3X2GA 5GM9A 1WC2A 3X2PA 4ZM7A 1KQFA 1I50A 1SFOA 3M3GA 3CQZA 1H0HA 3DMRA 3GTQA 1FDOA 3X2IA 3GTKA 2A68D 2O5JD 1OA7A 3H0GA 1BW3A 2JIMA 3X2HA 1R7RA 1PYQA 1WLFA 5FTLA 2VPZA 1DMRA 3SUMA 2AE0X 4FERA 3GTMA 4KDIA 1PPYA 1QCSA 1G8KA 4RV0A 1R27A 2VUMA 3SULA 2NAPA 4D7ZB 2PJJA 2JA5A 4JP7A 4KLNA 1EU1A 3IR7A 1PQHA 1VC3B 2BH0A 2JIQA 1Y5IA 2V3VA 2YU9A 3GTPA 2WAQA 1E5VA 4AYBA 1R9TA 1OA9A 2A69D 2CW0D 3HU1A 3ENGA 1TWFA 1ZYRD 4NOHA 2DMRA 4JJOA 2V45A 1AW8B 5DYIA 4AAYA 2PMZA 1YLEA 2WB1A 3PLXB 1ZC1A 3X2JA 2YUJA 1YNJD 4L48A 5FTMA 5GLXA 2BE5D 2JA7A 2PNWA 5H4UA 4CRZA 1SMYD 3X2NA 2JIPA 2Y0SA 2VPXA 5FTJA 4AOKB 3SUJA 4QIWA 4AONB 3X2OA 1H5NA 3QQ8A 5B6CA 3HU2A 1YNND 4FG2A 1FDIA 3X2LA
chains in the Genus database with same CATH topology
1BW4A 2BH0A 4ZM7A 1HD5A 2G6GA 3D30A 3X2GA 5GM9A 1WC2A 3X2PA 3M3GA 1OA9A 2HCZX 4JCWA 3ENGA 3X2IA 5GLYA 4JJOA 4JS7A 1OA7A 4AVRA 3X2JA 1BW3A 2GAEA 3X2HA 2G5DA 4L48A 2ENGA 2PICA 4JP6A 5GLXA 2PNWA 5H4UA 1N10A 3X2KA 4ENGA 3SUKA 4FG4A 3SUMA 3X2NA 2AE0X 4FERA 1L8FA 4FFTA 3SUJA 3SULA 3X2MA 3X2OA 2PJJA 3CZBA 2KQAA 4JP7A 4FG2A 3X2LA 2PI8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BW4 A;  2BH0 A;  4ZM7 A;  1HD5 A;  2G6G A;  3D30 A;  3X2G A;  5GM9 A;  1WC2 A;  3X2P A;  3M3G A;  1OA9 A;  2HCZ X;  4JCW A;  3ENG A;  3X2I A;  5GLY A;  4JJO A;  4JS7 A;  1OA7 A;  4AVR A;  3X2J A;  1BW3 A;  2GAE A;  3X2H A;  2G5D A;  4L48 A;  2ENG A;  2PIC A;  4JP6 A;  5GLX A;  2PNW A;  5H4U A;  1N10 A;  3X2K A;  4ENG A;  3SUK A;  4FG4 A;  3SUM A;  3X2N A;  2AE0 X;  4FER A;  1L8F A;  4FFT A;  3SUJ A;  3SUL A;  3X2M A;  3X2O A;  2PJJ A;  3CZB A;  2KQA A;  4JP7 A;  4FG2 A;  3X2L A;  2PI8 A; 
#chains in the Genus database with same CATH topology
 2JIR A;  3TIW A;  2C45 A;  3IR5 A;  3IR6 A;  2G6G A;  3GTG A;  1Y1W A;  2E7Z A;  2HCZ X;  5C1B A;  4JCW A;  1S3S A;  1PT1 A;  2EEO B;  4KDL A;  5T5M D;  1PT0 A;  3OUG A;  4GA6 A;  1IW7 D;  1Q16 A;  3FKI A;  2IV2 X;  2NYA A;  1Y4Z A;  3QWZ A;  5FTK A;  2E2H A;  1CR5 A;  1CZ4 A;  2ENG A;  2PIC A;  3O5A A;  4GA5 A;  4ENG A;  1N10 A;  3SUK A;  3HU3 A;  4FG4 A;  3GTL A;  4FFT A;  1I3Q A;  1E60 A;  4C2M A;  1TMO A;  3TM7 B;  2A6E D;  2NVY A;  3X2M A;  3CZB A;  2KQA A;  1WCM A;  2E2I A;  3GTO A;  3QC8 A;  2R92 A;  2PI8 A;  5T5I D;  2R7Z A;  4KO8 A;  1TWA A;  2R93 A;  1QDN A;  3HKZ A;  2B63 A;  1E18 A;  3QQ7 A;  1AA6 A;  1UHE A;  1E32 A;  5C18 A;  5GLY A;  1TWH A;  5FTN A;  4JS7 A;  2PJH B;  3GTJ A;  2JA6 A;  1TWC A;  4DMR A;  2JIO A;  1SIW A;  4AVR A;  1TWG A;  1G8J A;  1Y1V A;  2GAE A;  1KQG A;  2NVX A;  4CS0 A;  2G5D A;  2KI8 A;  3CF2 A;  4JP6 A;  1K83 A;  2A6H D;  2VPW A;  1OGY A;  4CRY G;  1L8F A;  5GLF A;  1PQF A;  1E61 A;  3ML1 A;  4KOD A;  5DYG A;  1CZ5 A;  2VPY A;  3X2K A;  4AZD A;  1BW4 A;  1PYU B;  1UHD A;  1PQE A;  1DMS A;  1HD5 A;  3D30 A;  5EPP A;  3X2G A;  5GM9 A;  1WC2 A;  3X2P A;  4ZM7 A;  1KQF A;  1I50 A;  1SFO A;  3M3G A;  3CQZ A;  1H0H A;  3DMR A;  3GTQ A;  1FDO A;  3X2I A;  3GTK A;  2A68 D;  2O5J D;  1OA7 A;  3H0G A;  1BW3 A;  2JIM A;  3X2H A;  1R7R A;  1PYQ A;  1WLF A;  5FTL A;  2VPZ A;  1DMR A;  3SUM A;  2AE0 X;  4FER A;  3GTM A;  4KDI A;  1PPY A;  1QCS A;  1G8K A;  4RV0 A;  1R27 A;  2VUM A;  3SUL A;  2NAP A;  4D7Z B;  2PJJ A;  2JA5 A;  4JP7 A;  4KLN A;  1EU1 A;  3IR7 A;  1PQH A;  1VC3 B;  2BH0 A;  2JIQ A;  1Y5I A;  2V3V A;  2YU9 A;  3GTP A;  2WAQ A;  1E5V A;  4AYB A;  1R9T A;  1OA9 A;  2A69 D;  2CW0 D;  3HU1 A;  3ENG A;  1TWF A;  1ZYR D;  4NOH A;  2DMR A;  4JJO A;  2V45 A;  1AW8 B;  5DYI A;  4AAY A;  2PMZ A;  1YLE A;  2WB1 A;  3PLX B;  1ZC1 A;  3X2J A;  2YUJ A;  1YNJ D;  4L48 A;  5FTM A;  5GLX A;  2BE5 D;  2JA7 A;  2PNW A;  5H4U A;  4CRZ A;  1SMY D;  3X2N A;  2JIP A;  2Y0S A;  2VPX A;  5FTJ A;  4AOK B;  3SUJ A;  4QIW A;  4AON B;  3X2O A;  1H5N A;  3QQ8 A;  5B6C A;  3HU2 A;  1YNN D;  4FG2 A;  1FDI A;  3X2L A; 
#chains in the Genus database with same CATH homology
 1BW4 A;  2BH0 A;  4ZM7 A;  1HD5 A;  2G6G A;  3D30 A;  3X2G A;  5GM9 A;  1WC2 A;  3X2P A;  3M3G A;  1OA9 A;  2HCZ X;  4JCW A;  3ENG A;  3X2I A;  5GLY A;  4JJO A;  4JS7 A;  1OA7 A;  4AVR A;  3X2J A;  1BW3 A;  2GAE A;  3X2H A;  2G5D A;  4L48 A;  2ENG A;  2PIC A;  4JP6 A;  5GLX A;  2PNW A;  5H4U A;  1N10 A;  3X2K A;  4ENG A;  3SUK A;  4FG4 A;  3SUM A;  3X2N A;  2AE0 X;  4FER A;  1L8F A;  4FFT A;  3SUJ A;  3SUL A;  3X2M A;  3X2O A;  2PJJ A;  3CZB A;  2KQA A;  4JP7 A;  4FG2 A;  3X2L A;  2PI8 A; 
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