3X2HA

X-ray structure of pccel45a n92d with cellopentaose at 95k.
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGDQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
molecule keywords Endoglucanase V-like protein
total genus 48
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2hA00
2PICA 3X2NA 1HD5A 3X2MA 3SUMA 2PI8A 3X2PA 2G6GA 2KQAA 4FG2A 1BW3A 3X2OA 2AE0X 1OA9A 3X2HA 4JJOA 3X2JA 2BH0A 3SULA 1L8FA 4JP6A 1N10A 3X2KA 3X2LA 3SUKA 4ENGA 1BW4A 2HCZX 3X2GA 4JP7A 4L48A 1OA7A 5GLXA 3X2IA 4AVRA 2G5DA 4FG4A 3M3GA 3CZBA 3ENGA 4JS7A 4ZM7A 5H4UA 4FERA 4FFTA 5GM9A 3SUJA 5GLYA 2GAEA 2PNWA 3D30A 2ENGA 2PJJA 4JCWA 1WC2A
chains in the Genus database with same CATH superfamily
3QC8A 3GTJA 4AYBA 1PT0A 1Y5IA 2PI8A 3SUMA 3X2PA 3QQ7A 2G6GA 1OGYA 2A68D 2AE0X 1E61A 1YNND 2E7ZA 2JIOA 2NAPA 4JJOA 1Y1WA 2BH0A 2E2IA 4CRZA 2R93A 5B6CA 4JP6A 3HU3A 3X2KA 1AA6A 1E60A 2B63A 1TWCA 2JIRA 5FTMA 2WB1A 1KQGA 3X2GA 1FDOA 4GA5A 1OA7A 3CQZA 3PLXB 3HU1A 1KQFA 2WAQA 4JS7A 5DYGA 4GA6A 2VUMA 1WLFA 4KLNA 2PJJA 4DMRA 1DMSA 1H5NA 1SFOA 1K83A 1CZ5A 3H0GA 3X2NA 3X2MA 1I3QA 1CZ4A 1TWFA 1PT1A 2VPYA 4AONB 3X2OA 1BW3A 1R7RA 3X2HA 2C45A 3GTOA 1TWHA 2PJHB 1L8FA 1TWGA 1BW4A 2HCZX 5FTLA 3OUGA 2DMRA 1YLEA 1PQFA 5FTJA 1DMRA 2JIPA 4L48A 2G5DA 3CZBA 4RV0A 1UHEA 3IR7A 5H4UA 4ZM7A 5C18A 5C1BA 4FFTA 3GTQA 4QIWA 5GLYA 2R7ZA 3GTGA 2PMZA 2IV2X 1ZC1A 1WC2A 2A6ED 2NYAA 1Y4ZA 3GTMA 4AZDA 2O5JD 1HD5A 1PYUB 5DYIA 4NOHA 2JA5A 1ZYRD 4C2MA 2JA6A 4KDLA 1VC3B 1EU1A 2E2HA 1H0HA 3SULA 2YU9A 2V45A 3QWZA 3X2LA 1AW8B 1N10A 4D7ZB 5FTNA 4CRYG 3IR6A 4KODA 1FDIA 1E32A 2JIQA 1R27A 1R9TA 3X2IA 4AVRA 2Y0SA 1S3SA 3DMRA 3TIWA 2VPWA 3M3GA 4FG4A 2BE5D 3GTLA 1SIWA 5FTKA 1UHDA 1I50A 2GAEA 2R92A 2KI8A 2VPZA 1G8KA 3D30A 2VPXA 2A69D 4CS0A 2PICA 2YUJA 2EEOB 3HU2A 3O5AA 1WCMA 3TM7B 2V3VA 1Q16A 1PQEA 5EPPA 2KQAA 1CR5A 4FG2A 5T5ID 4KO8A 3CF2A 1OA9A 1TMOA 1TWAA 3X2JA 2NVXA 2A6HD 3GTKA 1PQHA 3GTPA 5GLFA 1PYQA 3ML1A 4ENGA 5T5MD 3SUKA 1SMYD 1YNJD 1Y1VA 1E5VA 1QCSA 4AOKB 3FKIA 4AAYA 4JP7A 4KDIA 5GLXA 2JIMA 3ENGA 4FERA 3QQ8A 5GM9A 3SUJA 2NVYA 2JA7A 2CW0D 3HKZA 1QDNA 2PNWA 1G8JA 3IR5A 2ENGA 1IW7D 1PPYA 1E18A 4JCWA
chains in the Genus database with same CATH topology
2PICA 3X2NA 1HD5A 3X2MA 3SUMA 2PI8A 3X2PA 2G6GA 2KQAA 4FG2A 1BW3A 3X2OA 2AE0X 1OA9A 3X2HA 4JJOA 3X2JA 2BH0A 3SULA 1L8FA 4JP6A 1N10A 3X2KA 3X2LA 3SUKA 4ENGA 1BW4A 2HCZX 3X2GA 4JP7A 4L48A 1OA7A 5GLXA 3X2IA 4AVRA 2G5DA 4FG4A 3M3GA 3CZBA 3ENGA 4JS7A 4ZM7A 5H4UA 4FERA 4FFTA 5GM9A 3SUJA 5GLYA 2GAEA 2PNWA 3D30A 2ENGA 2PJJA 4JCWA 1WC2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PIC A;  3X2N A;  1HD5 A;  3X2M A;  3SUM A;  2PI8 A;  3X2P A;  2G6G A;  2KQA A;  4FG2 A;  1BW3 A;  3X2O A;  2AE0 X;  1OA9 A;  3X2H A;  4JJO A;  3X2J A;  2BH0 A;  3SUL A;  1L8F A;  4JP6 A;  1N10 A;  3X2K A;  3X2L A;  3SUK A;  4ENG A;  1BW4 A;  2HCZ X;  3X2G A;  4JP7 A;  4L48 A;  1OA7 A;  5GLX A;  3X2I A;  4AVR A;  2G5D A;  4FG4 A;  3M3G A;  3CZB A;  3ENG A;  4JS7 A;  4ZM7 A;  5H4U A;  4FER A;  4FFT A;  5GM9 A;  3SUJ A;  5GLY A;  2GAE A;  2PNW A;  3D30 A;  2ENG A;  2PJJ A;  4JCW A;  1WC2 A; 
#chains in the Genus database with same CATH topology
 3QC8 A;  3GTJ A;  4AYB A;  1PT0 A;  1Y5I A;  2PI8 A;  3SUM A;  3X2P A;  3QQ7 A;  2G6G A;  1OGY A;  2A68 D;  2AE0 X;  1E61 A;  1YNN D;  2E7Z A;  2JIO A;  2NAP A;  4JJO A;  1Y1W A;  2BH0 A;  2E2I A;  4CRZ A;  2R93 A;  5B6C A;  4JP6 A;  3HU3 A;  3X2K A;  1AA6 A;  1E60 A;  2B63 A;  1TWC A;  2JIR A;  5FTM A;  2WB1 A;  1KQG A;  3X2G A;  1FDO A;  4GA5 A;  1OA7 A;  3CQZ A;  3PLX B;  3HU1 A;  1KQF A;  2WAQ A;  4JS7 A;  5DYG A;  4GA6 A;  2VUM A;  1WLF A;  4KLN A;  2PJJ A;  4DMR A;  1DMS A;  1H5N A;  1SFO A;  1K83 A;  1CZ5 A;  3H0G A;  3X2N A;  3X2M A;  1I3Q A;  1CZ4 A;  1TWF A;  1PT1 A;  2VPY A;  4AON B;  3X2O A;  1BW3 A;  1R7R A;  3X2H A;  2C45 A;  3GTO A;  1TWH A;  2PJH B;  1L8F A;  1TWG A;  1BW4 A;  2HCZ X;  5FTL A;  3OUG A;  2DMR A;  1YLE A;  1PQF A;  5FTJ A;  1DMR A;  2JIP A;  4L48 A;  2G5D A;  3CZB A;  4RV0 A;  1UHE A;  3IR7 A;  5H4U A;  4ZM7 A;  5C18 A;  5C1B A;  4FFT A;  3GTQ A;  4QIW A;  5GLY A;  2R7Z A;  3GTG A;  2PMZ A;  2IV2 X;  1ZC1 A;  1WC2 A;  2A6E D;  2NYA A;  1Y4Z A;  3GTM A;  4AZD A;  2O5J D;  1HD5 A;  1PYU B;  5DYI A;  4NOH A;  2JA5 A;  1ZYR D;  4C2M A;  2JA6 A;  4KDL A;  1VC3 B;  1EU1 A;  2E2H A;  1H0H A;  3SUL A;  2YU9 A;  2V45 A;  3QWZ A;  3X2L A;  1AW8 B;  1N10 A;  4D7Z B;  5FTN A;  4CRY G;  3IR6 A;  4KOD A;  1FDI A;  1E32 A;  2JIQ A;  1R27 A;  1R9T A;  3X2I A;  4AVR A;  2Y0S A;  1S3S A;  3DMR A;  3TIW A;  2VPW A;  3M3G A;  4FG4 A;  2BE5 D;  3GTL A;  1SIW A;  5FTK A;  1UHD A;  1I50 A;  2GAE A;  2R92 A;  2KI8 A;  2VPZ A;  1G8K A;  3D30 A;  2VPX A;  2A69 D;  4CS0 A;  2PIC A;  2YUJ A;  2EEO B;  3HU2 A;  3O5A A;  1WCM A;  3TM7 B;  2V3V A;  1Q16 A;  1PQE A;  5EPP A;  2KQA A;  1CR5 A;  4FG2 A;  5T5I D;  4KO8 A;  3CF2 A;  1OA9 A;  1TMO A;  1TWA A;  3X2J A;  2NVX A;  2A6H D;  3GTK A;  1PQH A;  3GTP A;  5GLF A;  1PYQ A;  3ML1 A;  4ENG A;  5T5M D;  3SUK A;  1SMY D;  1YNJ D;  1Y1V A;  1E5V A;  1QCS A;  4AOK B;  3FKI A;  4AAY A;  4JP7 A;  4KDI A;  5GLX A;  2JIM A;  3ENG A;  4FER A;  3QQ8 A;  5GM9 A;  3SUJ A;  2NVY A;  2JA7 A;  2CW0 D;  3HKZ A;  1QDN A;  2PNW A;  1G8J A;  3IR5 A;  2ENG A;  1IW7 D;  1PPY A;  1E18 A;  4JCW A; 
#chains in the Genus database with same CATH homology
 2PIC A;  3X2N A;  1HD5 A;  3X2M A;  3SUM A;  2PI8 A;  3X2P A;  2G6G A;  2KQA A;  4FG2 A;  1BW3 A;  3X2O A;  2AE0 X;  1OA9 A;  3X2H A;  4JJO A;  3X2J A;  2BH0 A;  3SUL A;  1L8F A;  4JP6 A;  1N10 A;  3X2K A;  3X2L A;  3SUK A;  4ENG A;  1BW4 A;  2HCZ X;  3X2G A;  4JP7 A;  4L48 A;  1OA7 A;  5GLX A;  3X2I A;  4AVR A;  2G5D A;  4FG4 A;  3M3G A;  3CZB A;  3ENG A;  4JS7 A;  4ZM7 A;  5H4U A;  4FER A;  4FFT A;  5GM9 A;  3SUJ A;  5GLY A;  2GAE A;  2PNW A;  3D30 A;  2ENG A;  2PJJ A;  4JCW A;  1WC2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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