3X2NA

Proton relay pathway in inverting cellulase
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
molecule tags Hydrolase
source organism Phanerochaete chrysosporium
molecule keywords Endoglucanase V-like protein
total genus 49
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2nA00
3X2OA 1WC2A 4JJOA 3SULA 1BW4A 4JP6A 3X2IA 2PNWA 3X2PA 4AVRA 1N10A 1OA9A 2BH0A 2G6GA 2PI8A 1HD5A 1OA7A 3ENGA 3X2JA 4FG2A 2KQAA 3X2KA 3X2LA 2G5DA 4FERA 5GLXA 3SUJA 4JCWA 4ENGA 3X2MA 3D30A 4FFTA 4FG4A 5GLYA 4ZM7A 2PICA 2ENGA 5GM9A 1BW3A 3CZBA 1L8FA 3SUMA 4JP7A 2AE0X 4L48A 3SUKA 2HCZX 3X2HA 3X2GA 3X2NA 4JS7A 2PJJA 3M3GA 5H4UA 2GAEA
chains in the Genus database with same CATH superfamily
1WC2A 1TMOA 2PNWA 2G6GA 2VPZA 1TWFA 1PYUB 2R93A 3X2KA 4FERA 5FTKA 3GTQA 4CRZA 1G8JA 4JCWA 2VPXA 3X2MA 4ENGA 5T5MD 3GTGA 1FDIA 1SIWA 2JIOA 5FTJA 2A69D 4ZM7A 1AW8B 1TWAA 1L8FA 3SUMA 1CR5A 1UHDA 2YUJA 3GTKA 1PPYA 1S3SA 4JP7A 3SUKA 3CQZA 1PQEA 2HCZX 4RV0A 2O5JD 1PQHA 1R7RA 1YNJD 2KI8A 1TWHA 4JS7A 4KDIA 1Y1WA 1SMYD 1PQFA 2C45A 2JIPA 1Y1VA 4NOHA 3SULA 4JJOA 2BE5D 1I50A 3X2IA 3TIWA 5C18A 3HKZA 5EPPA 1OA9A 2BH0A 2CW0D 1PT1A 4AOKB 1Y4ZA 2VPYA 3ENGA 3QC8A 3FKIA 2G5DA 5GLXA 3GTMA 1PYQA 4KODA 3GTPA 2JIRA 1KQFA 4KDLA 2WB1A 4KLNA 4DMRA 5GLYA 1QDNA 1E61A 2PICA 3HU2A 3CZBA 5FTLA 1BW3A 1EU1A 2E7ZA 1E32A 3HU3A 1H0HA 5FTMA 1R9TA 3X2NA 2NVYA 3PLXB 2V45A 1YNND 3M3GA 5H4UA 2JA7A 1AA6A 1TWCA 2NAPA 1CZ5A 1UHEA 1ZC1A 2IV2X 2JIMA 3DMRA 3HU1A 3IR7A 3X2PA 4AYBA 5C1BA 5DYGA 5GLFA 2JA5A 1HD5A 1CZ4A 3O5AA 1KQGA 1E5VA 4FG2A 1ZYRD 4KO8A 2R92A 1K83A 2B63A 1H5NA 3D30A 1YLEA 1DMRA 2JIQA 3OUGA 3QQ8A 4FFTA 4FG4A 1E18A 3TM7B 2Y0SA 5B6CA 2V3VA 2E2HA 2NVXA 2PJHB 3QWZA 3GTLA 1Q16A 2AE0X 4L48A 1I3QA 5T5ID 3ML1A 3CF2A 2PJJA 1TWGA 5DYIA 1OGYA 1G8KA 3X2OA 1BW4A 1QCSA 4JP6A 2VUMA 4GA6A 4AVRA 1N10A 3IR6A 3IR5A 3GTJA 2YU9A 1IW7D 2PI8A 4C2MA 2A68D 4AONB 1OA7A 4AZDA 2E2IA 3X2JA 3X2LA 2KQAA 2JA6A 1DMSA 5FTNA 1PT0A 3SUJA 2NYAA 3GTOA 4CRYG 4QIWA 4D7ZB 4GA5A 2A6HD 2ENGA 5GM9A 2EEOB 1WCMA 1SFOA 1E60A 2A6ED 1R27A 1WLFA 2DMRA 1VC3B 2R7ZA 2WAQA 3QQ7A 3H0GA 1Y5IA 4AAYA 3X2HA 3X2GA 4CS0A 2PMZA 1FDOA 2VPWA 2GAEA
chains in the Genus database with same CATH topology
3X2OA 1WC2A 4JJOA 3SULA 1BW4A 4JP6A 3X2IA 2PNWA 3X2PA 4AVRA 1N10A 1OA9A 2BH0A 2G6GA 2PI8A 1HD5A 1OA7A 3ENGA 3X2JA 4FG2A 2KQAA 3X2KA 3X2LA 2G5DA 4FERA 5GLXA 3SUJA 4JCWA 4ENGA 3X2MA 3D30A 4FFTA 4FG4A 5GLYA 4ZM7A 2PICA 2ENGA 5GM9A 1BW3A 3CZBA 1L8FA 3SUMA 4JP7A 2AE0X 4L48A 3SUKA 2HCZX 3X2HA 3X2GA 3X2NA 4JS7A 2PJJA 3M3GA 5H4UA 2GAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3X2O A;  1WC2 A;  4JJO A;  3SUL A;  1BW4 A;  4JP6 A;  3X2I A;  2PNW A;  3X2P A;  4AVR A;  1N10 A;  1OA9 A;  2BH0 A;  2G6G A;  2PI8 A;  1HD5 A;  1OA7 A;  3ENG A;  3X2J A;  4FG2 A;  2KQA A;  3X2K A;  3X2L A;  2G5D A;  4FER A;  5GLX A;  3SUJ A;  4JCW A;  4ENG A;  3X2M A;  3D30 A;  4FFT A;  4FG4 A;  5GLY A;  4ZM7 A;  2PIC A;  2ENG A;  5GM9 A;  1BW3 A;  3CZB A;  1L8F A;  3SUM A;  4JP7 A;  2AE0 X;  4L48 A;  3SUK A;  2HCZ X;  3X2H A;  3X2G A;  3X2N A;  4JS7 A;  2PJJ A;  3M3G A;  5H4U A;  2GAE A; 
#chains in the Genus database with same CATH topology
 1WC2 A;  1TMO A;  2PNW A;  2G6G A;  2VPZ A;  1TWF A;  1PYU B;  2R93 A;  3X2K A;  4FER A;  5FTK A;  3GTQ A;  4CRZ A;  1G8J A;  4JCW A;  2VPX A;  3X2M A;  4ENG A;  5T5M D;  3GTG A;  1FDI A;  1SIW A;  2JIO A;  5FTJ A;  2A69 D;  4ZM7 A;  1AW8 B;  1TWA A;  1L8F A;  3SUM A;  1CR5 A;  1UHD A;  2YUJ A;  3GTK A;  1PPY A;  1S3S A;  4JP7 A;  3SUK A;  3CQZ A;  1PQE A;  2HCZ X;  4RV0 A;  2O5J D;  1PQH A;  1R7R A;  1YNJ D;  2KI8 A;  1TWH A;  4JS7 A;  4KDI A;  1Y1W A;  1SMY D;  1PQF A;  2C45 A;  2JIP A;  1Y1V A;  4NOH A;  3SUL A;  4JJO A;  2BE5 D;  1I50 A;  3X2I A;  3TIW A;  5C18 A;  3HKZ A;  5EPP A;  1OA9 A;  2BH0 A;  2CW0 D;  1PT1 A;  4AOK B;  1Y4Z A;  2VPY A;  3ENG A;  3QC8 A;  3FKI A;  2G5D A;  5GLX A;  3GTM A;  1PYQ A;  4KOD A;  3GTP A;  2JIR A;  1KQF A;  4KDL A;  2WB1 A;  4KLN A;  4DMR A;  5GLY A;  1QDN A;  1E61 A;  2PIC A;  3HU2 A;  3CZB A;  5FTL A;  1BW3 A;  1EU1 A;  2E7Z A;  1E32 A;  3HU3 A;  1H0H A;  5FTM A;  1R9T A;  3X2N A;  2NVY A;  3PLX B;  2V45 A;  1YNN D;  3M3G A;  5H4U A;  2JA7 A;  1AA6 A;  1TWC A;  2NAP A;  1CZ5 A;  1UHE A;  1ZC1 A;  2IV2 X;  2JIM A;  3DMR A;  3HU1 A;  3IR7 A;  3X2P A;  4AYB A;  5C1B A;  5DYG A;  5GLF A;  2JA5 A;  1HD5 A;  1CZ4 A;  3O5A A;  1KQG A;  1E5V A;  4FG2 A;  1ZYR D;  4KO8 A;  2R92 A;  1K83 A;  2B63 A;  1H5N A;  3D30 A;  1YLE A;  1DMR A;  2JIQ A;  3OUG A;  3QQ8 A;  4FFT A;  4FG4 A;  1E18 A;  3TM7 B;  2Y0S A;  5B6C A;  2V3V A;  2E2H A;  2NVX A;  2PJH B;  3QWZ A;  3GTL A;  1Q16 A;  2AE0 X;  4L48 A;  1I3Q A;  5T5I D;  3ML1 A;  3CF2 A;  2PJJ A;  1TWG A;  5DYI A;  1OGY A;  1G8K A;  3X2O A;  1BW4 A;  1QCS A;  4JP6 A;  2VUM A;  4GA6 A;  4AVR A;  1N10 A;  3IR6 A;  3IR5 A;  3GTJ A;  2YU9 A;  1IW7 D;  2PI8 A;  4C2M A;  2A68 D;  4AON B;  1OA7 A;  4AZD A;  2E2I A;  3X2J A;  3X2L A;  2KQA A;  2JA6 A;  1DMS A;  5FTN A;  1PT0 A;  3SUJ A;  2NYA A;  3GTO A;  4CRY G;  4QIW A;  4D7Z B;  4GA5 A;  2A6H D;  2ENG A;  5GM9 A;  2EEO B;  1WCM A;  1SFO A;  1E60 A;  2A6E D;  1R27 A;  1WLF A;  2DMR A;  1VC3 B;  2R7Z A;  2WAQ A;  3QQ7 A;  3H0G A;  1Y5I A;  4AAY A;  3X2H A;  3X2G A;  4CS0 A;  2PMZ A;  1FDO A;  2VPW A;  2GAE A; 
#chains in the Genus database with same CATH homology
 3X2O A;  1WC2 A;  4JJO A;  3SUL A;  1BW4 A;  4JP6 A;  3X2I A;  2PNW A;  3X2P A;  4AVR A;  1N10 A;  1OA9 A;  2BH0 A;  2G6G A;  2PI8 A;  1HD5 A;  1OA7 A;  3ENG A;  3X2J A;  4FG2 A;  2KQA A;  3X2K A;  3X2L A;  2G5D A;  4FER A;  5GLX A;  3SUJ A;  4JCW A;  4ENG A;  3X2M A;  3D30 A;  4FFT A;  4FG4 A;  5GLY A;  4ZM7 A;  2PIC A;  2ENG A;  5GM9 A;  1BW3 A;  3CZB A;  1L8F A;  3SUM A;  4JP7 A;  2AE0 X;  4L48 A;  3SUK A;  2HCZ X;  3X2H A;  3X2G A;  3X2N A;  4JS7 A;  2PJJ A;  3M3G A;  5H4U A;  2GAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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