3X2OA

Neutron and x-ray joint refined structure of pccel45a apo form at 298k.
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
180
structure length
179
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Phanerochaete chrysosporium
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
molecule keywords Endoglucanase V-like protein
total genus 49
structure length 179
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2oA00
2AE0X 4AVRA 3X2NA 3X2GA 4FG4A 4JJOA 3X2MA 2HCZX 1HD5A 1BW3A 4JP6A 3X2OA 4ENGA 2KQAA 3SUJA 3X2KA 5GM9A 3X2IA 4FG2A 1WC2A 3M3GA 2PICA 3X2HA 4L48A 3SULA 2PNWA 3X2PA 1OA7A 2G6GA 1L8FA 5H4UA 1OA9A 3SUMA 1N10A 3ENGA 4JCWA 5GLXA 3X2JA 5GLYA 4FERA 4FFTA 2GAEA 3X2LA 1BW4A 4JS7A 4JP7A 3D30A 2ENGA 2PI8A 3SUKA 2BH0A 2PJJA 2G5DA 4ZM7A 3CZBA
chains in the Genus database with same CATH superfamily
1H0HA 4KDIA 4JJOA 4DMRA 1DMRA 2VPZA 1BW3A 3QWZA 5EPPA 4AZDA 5C18A 1FDIA 1VC3B 3ML1A 1YLEA 2PICA 3X2HA 2PNWA 2E7ZA 2JA5A 1CZ4A 1CR5A 2A69D 1OA9A 2JIPA 4RV0A 1N10A 3QQ8A 4JCWA 5GLXA 5C1BA 3GTKA 3TIWA 4FERA 2A68D 1PPYA 2R92A 1BW4A 4KODA 1K83A 1SFOA 1E61A 3D30A 3HU1A 2PJJA 2V45A 4JS7A 1EU1A 4GA6A 1KQGA 1L8FA 2YU9A 3GTGA 4AOKB 1WCMA 3X2NA 4FG4A 3IR5A 1AW8B 1TWFA 3GTPA 4JP6A 2JIRA 1PQEA 2BE5D 4CRYG 2O5JD 3X2KA 2E2HA 1YNJD 1Y1VA 2NAPA 2VPWA 2CW0D 1S3SA 2WAQA 3IR7A 5FTNA 3X2IA 5T5MD 2JIQA 5GLFA 3DMRA 3CF2A 1QDNA 1OA7A 5H4UA 1Y5IA 2VPXA 4KO8A 5DYIA 4QIWA 3HU2A 3GTQA 3PLXB 4NOHA 4AYBA 1E5VA 3X2JA 3O5AA 1ZC1A 1SIWA 2WB1A 2NVXA 3OUGA 4FFTA 1R7RA 1KQFA 5FTKA 2IV2X 3HU3A 2ENGA 1PYUB 1OGYA 2PI8A 3SUKA 2NYAA 4D7ZB 5B6CA 3CQZA 5GM9A 4ZM7A 4AVRA 3GTMA 3GTOA 4KDLA 1TWAA 1HD5A 4ENGA 3X2OA 4C2MA 1PT1A 1PQHA 2KQAA 1E32A 2B63A 2A6HD 1AA6A 1PQFA 2NVYA 1H5NA 3SULA 3GTLA 1G8KA 1G8JA 3X2PA 3H0GA 3GTJA 2G6GA 5T5ID 2JIMA 2PJHB 3QC8A 1E60A 3SUMA 2R93A 2VUMA 1TWHA 3QQ7A 1SMYD 5FTLA 1R9TA 3X2LA 3TM7B 1QCSA 2PMZA 1UHDA 1Y1WA 1ZYRD 2DMRA 1PT0A 1DMSA 1YNND 3CZBA 1PYQA 2AE0X 1R27A 4AAYA 1UHEA 3X2GA 3X2MA 1Q16A 2A6ED 2HCZX 4GA5A 5FTMA 2C45A 3SUJA 2JA7A 1IW7D 4FG2A 5FTJA 3HKZA 2Y0SA 1WC2A 3M3GA 4CS0A 4L48A 1FDOA 1TWCA 1E18A 1WLFA 3FKIA 1I3QA 2R7ZA 1CZ5A 1TMOA 2VPYA 3ENGA 3IR6A 5DYGA 2JIOA 2EEOB 5GLYA 2JA6A 4AONB 1TWGA 2GAEA 1I50A 2V3VA 4CRZA 4JP7A 2YUJA 1Y4ZA 2KI8A 2BH0A 2E2IA 2G5DA 4KLNA
chains in the Genus database with same CATH topology
2AE0X 4AVRA 3X2NA 3X2GA 4FG4A 4JJOA 3X2MA 2HCZX 1HD5A 1BW3A 4JP6A 3X2OA 4ENGA 2KQAA 3SUJA 3X2KA 5GM9A 3X2IA 4FG2A 1WC2A 3M3GA 2PICA 3X2HA 4L48A 3SULA 2PNWA 3X2PA 1OA7A 2G6GA 1L8FA 5H4UA 1OA9A 3SUMA 1N10A 3ENGA 4JCWA 5GLXA 3X2JA 5GLYA 4FERA 4FFTA 2GAEA 3X2LA 1BW4A 4JS7A 4JP7A 3D30A 2ENGA 2PI8A 3SUKA 2BH0A 2PJJA 2G5DA 4ZM7A 3CZBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AE0 X;  4AVR A;  3X2N A;  3X2G A;  4FG4 A;  4JJO A;  3X2M A;  2HCZ X;  1HD5 A;  1BW3 A;  4JP6 A;  3X2O A;  4ENG A;  2KQA A;  3SUJ A;  3X2K A;  5GM9 A;  3X2I A;  4FG2 A;  1WC2 A;  3M3G A;  2PIC A;  3X2H A;  4L48 A;  3SUL A;  2PNW A;  3X2P A;  1OA7 A;  2G6G A;  1L8F A;  5H4U A;  1OA9 A;  3SUM A;  1N10 A;  3ENG A;  4JCW A;  5GLX A;  3X2J A;  5GLY A;  4FER A;  4FFT A;  2GAE A;  3X2L A;  1BW4 A;  4JS7 A;  4JP7 A;  3D30 A;  2ENG A;  2PI8 A;  3SUK A;  2BH0 A;  2PJJ A;  2G5D A;  4ZM7 A;  3CZB A; 
#chains in the Genus database with same CATH topology
 1H0H A;  4KDI A;  4JJO A;  4DMR A;  1DMR A;  2VPZ A;  1BW3 A;  3QWZ A;  5EPP A;  4AZD A;  5C18 A;  1FDI A;  1VC3 B;  3ML1 A;  1YLE A;  2PIC A;  3X2H A;  2PNW A;  2E7Z A;  2JA5 A;  1CZ4 A;  1CR5 A;  2A69 D;  1OA9 A;  2JIP A;  4RV0 A;  1N10 A;  3QQ8 A;  4JCW A;  5GLX A;  5C1B A;  3GTK A;  3TIW A;  4FER A;  2A68 D;  1PPY A;  2R92 A;  1BW4 A;  4KOD A;  1K83 A;  1SFO A;  1E61 A;  3D30 A;  3HU1 A;  2PJJ A;  2V45 A;  4JS7 A;  1EU1 A;  4GA6 A;  1KQG A;  1L8F A;  2YU9 A;  3GTG A;  4AOK B;  1WCM A;  3X2N A;  4FG4 A;  3IR5 A;  1AW8 B;  1TWF A;  3GTP A;  4JP6 A;  2JIR A;  1PQE A;  2BE5 D;  4CRY G;  2O5J D;  3X2K A;  2E2H A;  1YNJ D;  1Y1V A;  2NAP A;  2VPW A;  2CW0 D;  1S3S A;  2WAQ A;  3IR7 A;  5FTN A;  3X2I A;  5T5M D;  2JIQ A;  5GLF A;  3DMR A;  3CF2 A;  1QDN A;  1OA7 A;  5H4U A;  1Y5I A;  2VPX A;  4KO8 A;  5DYI A;  4QIW A;  3HU2 A;  3GTQ A;  3PLX B;  4NOH A;  4AYB A;  1E5V A;  3X2J A;  3O5A A;  1ZC1 A;  1SIW A;  2WB1 A;  2NVX A;  3OUG A;  4FFT A;  1R7R A;  1KQF A;  5FTK A;  2IV2 X;  3HU3 A;  2ENG A;  1PYU B;  1OGY A;  2PI8 A;  3SUK A;  2NYA A;  4D7Z B;  5B6C A;  3CQZ A;  5GM9 A;  4ZM7 A;  4AVR A;  3GTM A;  3GTO A;  4KDL A;  1TWA A;  1HD5 A;  4ENG A;  3X2O A;  4C2M A;  1PT1 A;  1PQH A;  2KQA A;  1E32 A;  2B63 A;  2A6H D;  1AA6 A;  1PQF A;  2NVY A;  1H5N A;  3SUL A;  3GTL A;  1G8K A;  1G8J A;  3X2P A;  3H0G A;  3GTJ A;  2G6G A;  5T5I D;  2JIM A;  2PJH B;  3QC8 A;  1E60 A;  3SUM A;  2R93 A;  2VUM A;  1TWH A;  3QQ7 A;  1SMY D;  5FTL A;  1R9T A;  3X2L A;  3TM7 B;  1QCS A;  2PMZ A;  1UHD A;  1Y1W A;  1ZYR D;  2DMR A;  1PT0 A;  1DMS A;  1YNN D;  3CZB A;  1PYQ A;  2AE0 X;  1R27 A;  4AAY A;  1UHE A;  3X2G A;  3X2M A;  1Q16 A;  2A6E D;  2HCZ X;  4GA5 A;  5FTM A;  2C45 A;  3SUJ A;  2JA7 A;  1IW7 D;  4FG2 A;  5FTJ A;  3HKZ A;  2Y0S A;  1WC2 A;  3M3G A;  4CS0 A;  4L48 A;  1FDO A;  1TWC A;  1E18 A;  1WLF A;  3FKI A;  1I3Q A;  2R7Z A;  1CZ5 A;  1TMO A;  2VPY A;  3ENG A;  3IR6 A;  5DYG A;  2JIO A;  2EEO B;  5GLY A;  2JA6 A;  4AON B;  1TWG A;  2GAE A;  1I50 A;  2V3V A;  4CRZ A;  4JP7 A;  2YUJ A;  1Y4Z A;  2KI8 A;  2BH0 A;  2E2I A;  2G5D A;  4KLN A; 
#chains in the Genus database with same CATH homology
 2AE0 X;  4AVR A;  3X2N A;  3X2G A;  4FG4 A;  4JJO A;  3X2M A;  2HCZ X;  1HD5 A;  1BW3 A;  4JP6 A;  3X2O A;  4ENG A;  2KQA A;  3SUJ A;  3X2K A;  5GM9 A;  3X2I A;  4FG2 A;  1WC2 A;  3M3G A;  2PIC A;  3X2H A;  4L48 A;  3SUL A;  2PNW A;  3X2P A;  1OA7 A;  2G6G A;  1L8F A;  5H4U A;  1OA9 A;  3SUM A;  1N10 A;  3ENG A;  4JCW A;  5GLX A;  3X2J A;  5GLY A;  4FER A;  4FFT A;  2GAE A;  3X2L A;  1BW4 A;  4JS7 A;  4JP7 A;  3D30 A;  2ENG A;  2PI8 A;  3SUK A;  2BH0 A;  2PJJ A;  2G5D A;  4ZM7 A;  3CZB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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