5GLXA

Crystal structure of a glycoside hydrolase from thielavia terrestris nrrl 8126
Total Genus 71
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
217
structure length
217
Chain Sequence
AEFASGSGQSTRYWDCCKPSCAWPGKAAVSQPVYACDANFQRLSDFNVQSGCNGGSAYSCADQTPWAVNDNLAYGFAATSIAGGSESSWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNQFDIAMPGGGVGIFNGCSSQFGGLPGAQYGGISSRDQCDSFPAPLKPGCQWRFDWFQNADNPTFTFQQVQCPAEIVARSGCKRNDDSSFPVFTPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-beta-endoglucanase from Thielavia terrestris
pubmed doi rcsb
molecule tags Hydrolase
source organism Thielavia terrestris nrrl 8126
molecule keywords Glycoside hydrolase family 45 protein
total genus 71
structure length 217
sequence length 217
ec nomenclature
pdb deposition date 2016-07-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 5glxA00
3CZBA 2ENGA 2GAEA 1OA9A 4FG4A 4FG2A 2PICA 3X2KA 4FFTA 3SUKA 3X2MA 3X2GA 1N10A 4ENGA 4JP7A 1OA7A 3ENGA 4JCWA 2BH0A 1BW4A 3X2OA 5GLXA 2G5DA 5H4UA 3SULA 3X2IA 3X2LA 4JJOA 1HD5A 2G6GA 4JP6A 5GM9A 2PJJA 3X2PA 3D30A 2HCZX 3X2JA 2PI8A 1WC2A 4AVRA 3X2HA 4JS7A 2AE0X 3M3GA 4ZM7A 4L48A 5GLYA 3X2NA 1L8FA 3SUJA 2KQAA 4FERA 2PNWA 1BW3A 3SUMA
chains in the Genus database with same CATH superfamily
1PQEA 4FG4A 4FG2A 2PJHB 3X2KA 4FFTA 5C1BA 2A68D 2R93A 2R92A 3SUKA 1ZC1A 3QQ8A 2R7ZA 4KODA 5T5MD 4AONB 1OA7A 1PYUB 4KDIA 1R7RA 1TWAA 2VPYA 1Y1VA 5EPPA 1Y4ZA 5GLXA 1G8KA 1EU1A 1PT0A 1I3QA 4JJOA 1HD5A 2YUJA 3TIWA 1I50A 1E18A 1E60A 1FDIA 5C18A 4GA5A 2HCZX 1S3SA 2PI8A 2JIRA 4AZDA 2JA5A 1PT1A 1DMSA 3M3GA 4KDLA 4L48A 2A6HD 3X2LA 2KQAA 3PLXB 5B6CA 2Y0SA 4AOKB 3CZBA 3TM7B 2E7ZA 3QC8A 4DMRA 2GAEA 1OA9A 3FKIA 1KQFA 1UHEA 2JA6A 1AW8B 3X2MA 3X2GA 4NOHA 3HU1A 1IW7D 2VPXA 3HU2A 4CRZA 4JP7A 1R27A 3QQ7A 2VPWA 5DYIA 1OGYA 3GTQA 3QWZA 2YU9A 1BW4A 4RV0A 4D7ZB 1Y5IA 1FDOA 4JP6A 1E61A 3CQZA 1WCMA 2NAPA 3HU3A 3X2PA 1H0HA 3O5AA 2O5JD 3CF2A 3D30A 1DMRA 1G8JA 5FTNA 2AE0X 5GLYA 1SFOA 2V3VA 2JIQA 4KLNA 4CS0A 2VUMA 1BW3A 1KQGA 1VC3B 2NVXA 5DYGA 4QIWA 2B63A 2BE5D 2V45A 4ENGA 1PYQA 2A6ED 2JIPA 1QDNA 3GTLA 1SIWA 3ENGA 3GTPA 2E2IA 1UHDA 1SMYD 2JIOA 2WB1A 2G5DA 3X2IA 2JA7A 1TWGA 2JIMA 2PMZA 5GLFA 2G6GA 2KI8A 2PJJA 1H5NA 1TWCA 2NYAA 1CZ4A 4AYBA 3GTMA 4AVRA 5FTJA 3IR5A 3GTOA 3IR6A 3X2NA 1N10A 1L8FA 1TWHA 1R9TA 4GA6A 2PNWA 3OUGA 1YLEA 2WAQA 2ENGA 2CW0D 3SUMA 1TWFA 2A69D 2NVYA 1Y1WA 1QCSA 5FTLA 2PICA 3GTGA 1E5VA 1PPYA 3DMRA 3HKZA 1E32A 3H0GA 5T5ID 4C2MA 1Q16A 2C45A 3GTJA 2E2HA 4KO8A 1CZ5A 1WLFA 2IV2X 3ML1A 3IR7A 2DMRA 4JCWA 2BH0A 1TMOA 1PQHA 3X2OA 5H4UA 3GTKA 3SULA 2VPZA 1CR5A 5GM9A 3X2JA 1YNJD 1YNND 2EEOB 4CRYG 1WC2A 1K83A 3X2HA 5FTKA 4JS7A 4ZM7A 4AAYA 1AA6A 1ZYRD 1PQFA 3SUJA 4FERA 5FTMA
chains in the Genus database with same CATH topology
3CZBA 2ENGA 2GAEA 1OA9A 4FG4A 4FG2A 2PICA 3X2KA 4FFTA 3SUKA 3X2MA 3X2GA 1N10A 4ENGA 4JP7A 1OA7A 3ENGA 4JCWA 2BH0A 1BW4A 3X2OA 5GLXA 2G5DA 5H4UA 3SULA 3X2IA 3X2LA 4JJOA 1HD5A 2G6GA 4JP6A 5GM9A 2PJJA 3X2PA 3D30A 2HCZX 3X2JA 2PI8A 1WC2A 4AVRA 3X2HA 4JS7A 2AE0X 3M3GA 4ZM7A 4L48A 5GLYA 3X2NA 1L8FA 3SUJA 2KQAA 4FERA 2PNWA 1BW3A 3SUMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CZB A;  2ENG A;  2GAE A;  1OA9 A;  4FG4 A;  4FG2 A;  2PIC A;  3X2K A;  4FFT A;  3SUK A;  3X2M A;  3X2G A;  1N10 A;  4ENG A;  4JP7 A;  1OA7 A;  3ENG A;  4JCW A;  2BH0 A;  1BW4 A;  3X2O A;  5GLX A;  2G5D A;  5H4U A;  3SUL A;  3X2I A;  3X2L A;  4JJO A;  1HD5 A;  2G6G A;  4JP6 A;  5GM9 A;  2PJJ A;  3X2P A;  3D30 A;  2HCZ X;  3X2J A;  2PI8 A;  1WC2 A;  4AVR A;  3X2H A;  4JS7 A;  2AE0 X;  3M3G A;  4ZM7 A;  4L48 A;  5GLY A;  3X2N A;  1L8F A;  3SUJ A;  2KQA A;  4FER A;  2PNW A;  1BW3 A;  3SUM A; 
#chains in the Genus database with same CATH topology
 1PQE A;  4FG4 A;  4FG2 A;  2PJH B;  3X2K A;  4FFT A;  5C1B A;  2A68 D;  2R93 A;  2R92 A;  3SUK A;  1ZC1 A;  3QQ8 A;  2R7Z A;  4KOD A;  5T5M D;  4AON B;  1OA7 A;  1PYU B;  4KDI A;  1R7R A;  1TWA A;  2VPY A;  1Y1V A;  5EPP A;  1Y4Z A;  5GLX A;  1G8K A;  1EU1 A;  1PT0 A;  1I3Q A;  4JJO A;  1HD5 A;  2YUJ A;  3TIW A;  1I50 A;  1E18 A;  1E60 A;  1FDI A;  5C18 A;  4GA5 A;  2HCZ X;  1S3S A;  2PI8 A;  2JIR A;  4AZD A;  2JA5 A;  1PT1 A;  1DMS A;  3M3G A;  4KDL A;  4L48 A;  2A6H D;  3X2L A;  2KQA A;  3PLX B;  5B6C A;  2Y0S A;  4AOK B;  3CZB A;  3TM7 B;  2E7Z A;  3QC8 A;  4DMR A;  2GAE A;  1OA9 A;  3FKI A;  1KQF A;  1UHE A;  2JA6 A;  1AW8 B;  3X2M A;  3X2G A;  4NOH A;  3HU1 A;  1IW7 D;  2VPX A;  3HU2 A;  4CRZ A;  4JP7 A;  1R27 A;  3QQ7 A;  2VPW A;  5DYI A;  1OGY A;  3GTQ A;  3QWZ A;  2YU9 A;  1BW4 A;  4RV0 A;  4D7Z B;  1Y5I A;  1FDO A;  4JP6 A;  1E61 A;  3CQZ A;  1WCM A;  2NAP A;  3HU3 A;  3X2P A;  1H0H A;  3O5A A;  2O5J D;  3CF2 A;  3D30 A;  1DMR A;  1G8J A;  5FTN A;  2AE0 X;  5GLY A;  1SFO A;  2V3V A;  2JIQ A;  4KLN A;  4CS0 A;  2VUM A;  1BW3 A;  1KQG A;  1VC3 B;  2NVX A;  5DYG A;  4QIW A;  2B63 A;  2BE5 D;  2V45 A;  4ENG A;  1PYQ A;  2A6E D;  2JIP A;  1QDN A;  3GTL A;  1SIW A;  3ENG A;  3GTP A;  2E2I A;  1UHD A;  1SMY D;  2JIO A;  2WB1 A;  2G5D A;  3X2I A;  2JA7 A;  1TWG A;  2JIM A;  2PMZ A;  5GLF A;  2G6G A;  2KI8 A;  2PJJ A;  1H5N A;  1TWC A;  2NYA A;  1CZ4 A;  4AYB A;  3GTM A;  4AVR A;  5FTJ A;  3IR5 A;  3GTO A;  3IR6 A;  3X2N A;  1N10 A;  1L8F A;  1TWH A;  1R9T A;  4GA6 A;  2PNW A;  3OUG A;  1YLE A;  2WAQ A;  2ENG A;  2CW0 D;  3SUM A;  1TWF A;  2A69 D;  2NVY A;  1Y1W A;  1QCS A;  5FTL A;  2PIC A;  3GTG A;  1E5V A;  1PPY A;  3DMR A;  3HKZ A;  1E32 A;  3H0G A;  5T5I D;  4C2M A;  1Q16 A;  2C45 A;  3GTJ A;  2E2H A;  4KO8 A;  1CZ5 A;  1WLF A;  2IV2 X;  3ML1 A;  3IR7 A;  2DMR A;  4JCW A;  2BH0 A;  1TMO A;  1PQH A;  3X2O A;  5H4U A;  3GTK A;  3SUL A;  2VPZ A;  1CR5 A;  5GM9 A;  3X2J A;  1YNJ D;  1YNN D;  2EEO B;  4CRY G;  1WC2 A;  1K83 A;  3X2H A;  5FTK A;  4JS7 A;  4ZM7 A;  4AAY A;  1AA6 A;  1ZYR D;  1PQF A;  3SUJ A;  4FER A;  5FTM A; 
#chains in the Genus database with same CATH homology
 3CZB A;  2ENG A;  2GAE A;  1OA9 A;  4FG4 A;  4FG2 A;  2PIC A;  3X2K A;  4FFT A;  3SUK A;  3X2M A;  3X2G A;  1N10 A;  4ENG A;  4JP7 A;  1OA7 A;  3ENG A;  4JCW A;  2BH0 A;  1BW4 A;  3X2O A;  5GLX A;  2G5D A;  5H4U A;  3SUL A;  3X2I A;  3X2L A;  4JJO A;  1HD5 A;  2G6G A;  4JP6 A;  5GM9 A;  2PJJ A;  3X2P A;  3D30 A;  2HCZ X;  3X2J A;  2PI8 A;  1WC2 A;  4AVR A;  3X2H A;  4JS7 A;  2AE0 X;  3M3G A;  4ZM7 A;  4L48 A;  5GLY A;  3X2N A;  1L8F A;  3SUJ A;  2KQA A;  4FER A;  2PNW A;  1BW3 A;  3SUM A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...