5GLYA

Crystal structure of a glycoside hydrolase in complex with cellotetrose from thielavia terrestris nrrl 8126
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
213
structure length
213
Chain Sequence
ASGSGQSTRYWDCCKPSCAWPGKAAVSQPVYACDANFQRLSDFNVQSGCNGGSAYSCADQTPWAVNDNLAYGFAATSIAGGSESSWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNQFDIAMPGGGVGIFNGCSSQFGGLPGAQYGGISSRDQCDSFPAPLKPGCQWRFDWFQNADNPTFTFQQVQCPAEIVARSGCKRNDDSSFPVFTP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-beta-endoglucanase from Thielavia terrestris
pubmed doi rcsb
molecule tags Hydrolase
source organism Thielavia terrestris nrrl 8126
molecule keywords Glycoside hydrolase family 45 protein
total genus 71
structure length 213
sequence length 213
ec nomenclature
pdb deposition date 2016-07-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 5glyA00
2G6GA 2AE0X 3X2IA 4JP6A 4FG4A 3SUKA 5GLYA 3D30A 5GLXA 3X2OA 2ENGA 4JCWA 3M3GA 2BH0A 3X2NA 2PI8A 3SUMA 1BW3A 2KQAA 1HD5A 3X2MA 2G5DA 4ENGA 4JS7A 5GM9A 4FFTA 5H4UA 3SUJA 1OA9A 4JP7A 1WC2A 2GAEA 4FERA 1OA7A 3ENGA 2PJJA 3X2LA 4AVRA 2HCZX 1BW4A 3X2KA 2PNWA 3SULA 4L48A 3X2GA 1N10A 3X2PA 3X2JA 4JJOA 2PICA 4FG2A 4ZM7A 3X2HA 3CZBA 1L8FA
chains in the Genus database with same CATH superfamily
3GTLA 2A6HD 3IR6A 1Y5IA 2A6ED 4FG4A 1QCSA 3IR7A 3D30A 3HU3A 1TWFA 4JP6A 5GLXA 3SUKA 1UHEA 4JCWA 2BH0A 3HKZA 5FTJA 2JIRA 1PPYA 2WAQA 3DMRA 3X2MA 1QDNA 1SIWA 5FTMA 3SUJA 1WC2A 2KI8A 4FERA 4AYBA 3CQZA 2R7ZA 3TIWA 3X2KA 2PNWA 2V45A 2R92A 1DMRA 2Y0SA 3ML1A 4C2MA 1UHDA 4KDLA 1SMYD 1PT0A 1TWGA 2E2HA 1PT1A 2PICA 4KDIA 2WB1A 4ZM7A 3CZBA 3QC8A 3X2IA 1E61A 3GTGA 2R93A 1CR5A 1EU1A 1TWCA 4AAYA 3M3GA 1I50A 2JA5A 3PLXB 1BW3A 1R9TA 1OGYA 1ZC1A 4KO8A 5GM9A 5T5ID 2YU9A 1Q16A 1ZYRD 1OA9A 4RV0A 3QWZA 1TMOA 4GA5A 2PMZA 2JIPA 1I3QA 1OA7A 1TWHA 3ENGA 5FTLA 2PJJA 2C45A 5T5MD 4CRYG 1FDOA 4AVRA 5C18A 1H5NA 5EPPA 3SULA 2A68D 1VC3B 1E32A 1TWAA 4KLNA 3GTKA 3X2PA 3X2JA 2E7ZA 4KODA 1WCMA 3QQ8A 2NAPA 3X2HA 3X2NA 2EEOB 1R27A 3HU2A 4DMRA 1IW7D 3X2OA 4AONB 2ENGA 2B63A 3QQ7A 4AOKB 3GTPA 3SUMA 2JIOA 2KQAA 1R7RA 1S3SA 4NOHA 4ENGA 4JS7A 4FFTA 5H4UA 2GAEA 2PJHB 1DMSA 3O5AA 1K83A 2JA6A 2IV2X 1Y4ZA 1E18A 3X2LA 4GA6A 2HCZX 3GTJA 2JA7A 1BW4A 3GTOA 1PQHA 2VPZA 3GTMA 5GLFA 5C1BA 1YNJD 1CZ4A 4JJOA 4D7ZB 1CZ5A 1PQFA 2A69D 1PQEA 3CF2A 2NVYA 1AW8B 4CS0A 2G6GA 4AZDA 3IR5A 2AE0X 3GTQA 1Y1VA 5GLYA 1YNND 5DYGA 2V3VA 2CW0D 3FKIA 5B6CA 1Y1WA 2BE5D 1G8JA 2PI8A 1HD5A 2G5DA 1SFOA 5DYIA 1E5VA 2JIQA 1YLEA 4JP7A 1H0HA 1KQGA 2NVXA 1WLFA 1KQFA 2VPYA 2VPWA 2YUJA 4CRZA 1FDIA 5FTNA 2E2IA 3TM7B 2VPXA 4L48A 1AA6A 3OUGA 2DMRA 3X2GA 1G8KA 2NYAA 4QIWA 1N10A 1E60A 2JIMA 2O5JD 2VUMA 1PYUB 4FG2A 3HU1A 3H0GA 1PYQA 1L8FA 5FTKA
chains in the Genus database with same CATH topology
2G6GA 2AE0X 3X2IA 4JP6A 4FG4A 3SUKA 5GLYA 3D30A 5GLXA 3X2OA 2ENGA 4JCWA 3M3GA 2BH0A 3X2NA 2PI8A 3SUMA 1BW3A 2KQAA 1HD5A 3X2MA 2G5DA 4ENGA 4JS7A 5GM9A 4FFTA 5H4UA 3SUJA 1OA9A 4JP7A 1WC2A 2GAEA 4FERA 1OA7A 3ENGA 2PJJA 3X2LA 4AVRA 2HCZX 1BW4A 3X2KA 2PNWA 3SULA 4L48A 3X2GA 1N10A 3X2PA 3X2JA 4JJOA 2PICA 4FG2A 4ZM7A 3X2HA 3CZBA 1L8FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2G6G A;  2AE0 X;  3X2I A;  4JP6 A;  4FG4 A;  3SUK A;  5GLY A;  3D30 A;  5GLX A;  3X2O A;  2ENG A;  4JCW A;  3M3G A;  2BH0 A;  3X2N A;  2PI8 A;  3SUM A;  1BW3 A;  2KQA A;  1HD5 A;  3X2M A;  2G5D A;  4ENG A;  4JS7 A;  5GM9 A;  4FFT A;  5H4U A;  3SUJ A;  1OA9 A;  4JP7 A;  1WC2 A;  2GAE A;  4FER A;  1OA7 A;  3ENG A;  2PJJ A;  3X2L A;  4AVR A;  2HCZ X;  1BW4 A;  3X2K A;  2PNW A;  3SUL A;  4L48 A;  3X2G A;  1N10 A;  3X2P A;  3X2J A;  4JJO A;  2PIC A;  4FG2 A;  4ZM7 A;  3X2H A;  3CZB A;  1L8F A; 
#chains in the Genus database with same CATH topology
 3GTL A;  2A6H D;  3IR6 A;  1Y5I A;  2A6E D;  4FG4 A;  1QCS A;  3IR7 A;  3D30 A;  3HU3 A;  1TWF A;  4JP6 A;  5GLX A;  3SUK A;  1UHE A;  4JCW A;  2BH0 A;  3HKZ A;  5FTJ A;  2JIR A;  1PPY A;  2WAQ A;  3DMR A;  3X2M A;  1QDN A;  1SIW A;  5FTM A;  3SUJ A;  1WC2 A;  2KI8 A;  4FER A;  4AYB A;  3CQZ A;  2R7Z A;  3TIW A;  3X2K A;  2PNW A;  2V45 A;  2R92 A;  1DMR A;  2Y0S A;  3ML1 A;  4C2M A;  1UHD A;  4KDL A;  1SMY D;  1PT0 A;  1TWG A;  2E2H A;  1PT1 A;  2PIC A;  4KDI A;  2WB1 A;  4ZM7 A;  3CZB A;  3QC8 A;  3X2I A;  1E61 A;  3GTG A;  2R93 A;  1CR5 A;  1EU1 A;  1TWC A;  4AAY A;  3M3G A;  1I50 A;  2JA5 A;  3PLX B;  1BW3 A;  1R9T A;  1OGY A;  1ZC1 A;  4KO8 A;  5GM9 A;  5T5I D;  2YU9 A;  1Q16 A;  1ZYR D;  1OA9 A;  4RV0 A;  3QWZ A;  1TMO A;  4GA5 A;  2PMZ A;  2JIP A;  1I3Q A;  1OA7 A;  1TWH A;  3ENG A;  5FTL A;  2PJJ A;  2C45 A;  5T5M D;  4CRY G;  1FDO A;  4AVR A;  5C18 A;  1H5N A;  5EPP A;  3SUL A;  2A68 D;  1VC3 B;  1E32 A;  1TWA A;  4KLN A;  3GTK A;  3X2P A;  3X2J A;  2E7Z A;  4KOD A;  1WCM A;  3QQ8 A;  2NAP A;  3X2H A;  3X2N A;  2EEO B;  1R27 A;  3HU2 A;  4DMR A;  1IW7 D;  3X2O A;  4AON B;  2ENG A;  2B63 A;  3QQ7 A;  4AOK B;  3GTP A;  3SUM A;  2JIO A;  2KQA A;  1R7R A;  1S3S A;  4NOH A;  4ENG A;  4JS7 A;  4FFT A;  5H4U A;  2GAE A;  2PJH B;  1DMS A;  3O5A A;  1K83 A;  2JA6 A;  2IV2 X;  1Y4Z A;  1E18 A;  3X2L A;  4GA6 A;  2HCZ X;  3GTJ A;  2JA7 A;  1BW4 A;  3GTO A;  1PQH A;  2VPZ A;  3GTM A;  5GLF A;  5C1B A;  1YNJ D;  1CZ4 A;  4JJO A;  4D7Z B;  1CZ5 A;  1PQF A;  2A69 D;  1PQE A;  3CF2 A;  2NVY A;  1AW8 B;  4CS0 A;  2G6G A;  4AZD A;  3IR5 A;  2AE0 X;  3GTQ A;  1Y1V A;  5GLY A;  1YNN D;  5DYG A;  2V3V A;  2CW0 D;  3FKI A;  5B6C A;  1Y1W A;  2BE5 D;  1G8J A;  2PI8 A;  1HD5 A;  2G5D A;  1SFO A;  5DYI A;  1E5V A;  2JIQ A;  1YLE A;  4JP7 A;  1H0H A;  1KQG A;  2NVX A;  1WLF A;  1KQF A;  2VPY A;  2VPW A;  2YUJ A;  4CRZ A;  1FDI A;  5FTN A;  2E2I A;  3TM7 B;  2VPX A;  4L48 A;  1AA6 A;  3OUG A;  2DMR A;  3X2G A;  1G8K A;  2NYA A;  4QIW A;  1N10 A;  1E60 A;  2JIM A;  2O5J D;  2VUM A;  1PYU B;  4FG2 A;  3HU1 A;  3H0G A;  1PYQ A;  1L8F A;  5FTK A; 
#chains in the Genus database with same CATH homology
 2G6G A;  2AE0 X;  3X2I A;  4JP6 A;  4FG4 A;  3SUK A;  5GLY A;  3D30 A;  5GLX A;  3X2O A;  2ENG A;  4JCW A;  3M3G A;  2BH0 A;  3X2N A;  2PI8 A;  3SUM A;  1BW3 A;  2KQA A;  1HD5 A;  3X2M A;  2G5D A;  4ENG A;  4JS7 A;  5GM9 A;  4FFT A;  5H4U A;  3SUJ A;  1OA9 A;  4JP7 A;  1WC2 A;  2GAE A;  4FER A;  1OA7 A;  3ENG A;  2PJJ A;  3X2L A;  4AVR A;  2HCZ X;  1BW4 A;  3X2K A;  2PNW A;  3SUL A;  4L48 A;  3X2G A;  1N10 A;  3X2P A;  3X2J A;  4JJO A;  2PIC A;  4FG2 A;  4ZM7 A;  3X2H A;  3CZB A;  1L8F A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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