1H3IA

Crystal structure of the histone methyltransferase set7/9
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
293
structure length
293
Chain Sequence
FFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Homo sapiens
publication title Crystal Structure and Functional Analysis of the Histone Methyltransferase Set7/9
pubmed doi rcsb
molecule keywords HISTONE H3 LYSINE 4 SPECIFIC METHYLTRANSFERASE
total genus 71
structure length 293
sequence length 293
chains with identical sequence B
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2002-09-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00856 SET SET domain
A PF02493 MORN MORN repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.110.10 Mainly Beta Single Sheet Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 1h3iA01
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 1h3iA02
5CCMA 1ML9A 3QWPA 5T0KA 3OXGA 3VV0A 2R3AA 2QPWA 3TG4A 3BO5A 3MO2A 5CCLA 4YNPA 3PDNA 3M5AA 3FPDA 5LSZA 3OXLA 1MVXA 4MI5A 2W5YA 3RAYA 5HI7A 3S8PA 3IHXA 5LSXA 2BQZA 4IJ8A 4O6FA 4C1QA 1N6CA 3RJWA 4JLGA 3QWVA 4WUYA 1N6AA 5F6KC 3MO0A 3DALA 4O30A 3F9WA 4NVQA 5T0MA 4YPAA 4RZ0A 1MUFA 2IGQA 1MT6A 4IJDA 3S7BA 3M54A 4MI0A 4QENA 1PEGA 2RFIA 3CBPA 5F6LA 2O8JA 3VUZA 4E47A 5JJ0A 5KJLA 3MO5A 5EX3A 3S7FA 5HQ8A 3SW9A 1ZKKA 3EP0A 1O9SA 5TTFA 3RIBA 5KJMA 4J8OA 5TEGA 4YNDA 3M56A 3RQ4A 4JDSA 5JINA 4AU7A 3OXFA 4Z4PA 3CBMA 3F9ZA 5T5GA 4QEPA 2G46A 3KMJA 3M59A 4H12A 3M58A 1MVHA 3M53A 4NJ5A 3F9YA 3OS5A 4YNMA 4YPEA 5ARFA 5EX0A 1H3IA 3MEKA 3OPEA 4J7FA 3S7JA 5F5EA 4LDGA 4J7IA 1XQHA 5TH7A 1N3JA 3N71A 4YPUA 5F59A 3K5KA 3KMAA 2F69A 3RU0A 5ARGA 3HNAA 5EG2A 4BUPA 3KMTA 4QEOA 4I51A 5CPRB 5AYFA 5KJNA 5JHNA 3QWWA 3CBOA 5JIYA 2W5ZA 3M57A 2JV0A 5KJKA 3S7DA 4J83A 3SWCA 3M55A 3F9XA 3TG5A 3OOIA 4FMUA 3DB5A
chains in the Genus database with same CATH superfamily
5CCMA 1ML9A 3QWPA 5T0KA 3OXGA 3VV0A 2R3AA 2QPWA 3TG4A 3BO5A 3MO2A 5CCLA 4YNPA 3PDNA 3M5AA 3FPDA 5LSZA 3OXLA 1MVXA 4MI5A 2W5YA 3RAYA 5HI7A 3S8PA 3IHXA 5LSXA 2BQZA 4IJ8A 4O6FA 4C1QA 1N6CA 3RJWA 4JLGA 3QWVA 4WUYA 1N6AA 5F6KC 3MO0A 3DALA 4O30A 3F9WA 4NVQA 5T0MA 4YPAA 4RZ0A 1MUFA 2IGQA 1MT6A 4IJDA 3S7BA 3M54A 4MI0A 4QENA 1PEGA 2RFIA 3CBPA 5F6LA 2O8JA 3VUZA 4E47A 5JJ0A 5KJLA 3MO5A 5EX3A 3S7FA 5HQ8A 3SW9A 1ZKKA 3EP0A 1O9SA 5TTFA 3RIBA 5KJMA 4J8OA 5TEGA 4YNDA 3M56A 3RQ4A 4JDSA 5JINA 4AU7A 3OXFA 4Z4PA 3CBMA 3F9ZA 5T5GA 4QEPA 2G46A 3KMJA 3M59A 4H12A 3M58A 1MVHA 3M53A 4NJ5A 3F9YA 3OS5A 4YNMA 4YPEA 5ARFA 5EX0A 1H3IA 3MEKA 3OPEA 4J7FA 3S7JA 5F5EA 4LDGA 4J7IA 1XQHA 5TH7A 1N3JA 3N71A 4YPUA 5F59A 3K5KA 3KMAA 2F69A 3RU0A 5ARGA 3HNAA 5EG2A 4BUPA 3KMTA 4QEOA 4I51A 5CPRB 5AYFA 5KJNA 5JHNA 3QWWA 3CBOA 5JIYA 2W5ZA 3M57A 2JV0A 5KJKA 3S7DA 4J83A 3SWCA 3M55A 3F9XA 3TG5A 3OOIA 4FMUA 3DB5A
chains in the Genus database with same CATH topology
5CCMA 1ML9A 3QWPA 5T0KA 3OXGA 3VV0A 2R3AA 2QPWA 3TG4A 3BO5A 3MO2A 5CCLA 4YNPA 3PDNA 3M5AA 3FPDA 5LSZA 3OXLA 1MVXA 4MI5A 2W5YA 3RAYA 5HI7A 3S8PA 3IHXA 5LSXA 2BQZA 4IJ8A 4O6FA 4C1QA 1N6CA 3RJWA 4JLGA 3QWVA 4WUYA 1N6AA 5F6KC 3MO0A 3DALA 4O30A 3F9WA 4NVQA 5T0MA 4YPAA 4RZ0A 1MUFA 2IGQA 1MT6A 4IJDA 3S7BA 3M54A 4MI0A 4QENA 1PEGA 2RFIA 3CBPA 5F6LA 2O8JA 3VUZA 4E47A 5JJ0A 5KJLA 3MO5A 5EX3A 3S7FA 5HQ8A 3SW9A 1ZKKA 3EP0A 1O9SA 5TTFA 3RIBA 5KJMA 4J8OA 5TEGA 4YNDA 3M56A 3RQ4A 4JDSA 5JINA 4AU7A 3OXFA 4Z4PA 3CBMA 3F9ZA 5T5GA 4QEPA 2G46A 3KMJA 3M59A 4H12A 3M58A 1MVHA 3M53A 4NJ5A 3F9YA 3OS5A 4YNMA 4YPEA 5ARFA 5EX0A 1H3IA 3MEKA 3OPEA 4J7FA 3S7JA 5F5EA 4LDGA 4J7IA 1XQHA 5TH7A 1N3JA 3N71A 4YPUA 5F59A 3K5KA 3KMAA 2F69A 3RU0A 5ARGA 3HNAA 5EG2A 4BUPA 3KMTA 4QEOA 4I51A 5CPRB 5AYFA 5KJNA 5JHNA 3QWWA 3CBOA 5JIYA 2W5ZA 3M57A 2JV0A 5KJKA 3S7DA 4J83A 3SWCA 3M55A 3F9XA 3TG5A 3OOIA 4FMUA 3DB5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5CCM A;  1ML9 A;  3QWP A;  5T0K A;  3OXG A;  3VV0 A;  2R3A A;  2QPW A;  3TG4 A;  3BO5 A;  3MO2 A;  5CCL A;  4YNP A;  3PDN A;  3M5A A;  3FPD A;  5LSZ A;  3OXL A;  1MVX A;  4MI5 A;  2W5Y A;  3RAY A;  5HI7 A;  3S8P A;  3IHX A;  5LSX A;  2BQZ A;  4IJ8 A;  4O6F A;  4C1Q A;  1N6C A;  3RJW A;  4JLG A;  3QWV A;  4WUY A;  1N6A A;  5F6K C;  3MO0 A;  3DAL A;  4O30 A;  3F9W A;  4NVQ A;  5T0M A;  4YPA A;  4RZ0 A;  1MUF A;  2IGQ A;  1MT6 A;  4IJD A;  3S7B A;  3M54 A;  4MI0 A;  4QEN A;  1PEG A;  2RFI A;  3CBP A;  5F6L A;  2O8J A;  3VUZ A;  4E47 A;  5JJ0 A;  5KJL A;  3MO5 A;  5EX3 A;  3S7F A;  5HQ8 A;  3SW9 A;  1ZKK A;  3EP0 A;  1O9S A;  5TTF A;  3RIB A;  5KJM A;  4J8O A;  5TEG A;  4YND A;  3M56 A;  3RQ4 A;  4JDS A;  5JIN A;  4AU7 A;  3OXF A;  4Z4P A;  3CBM A;  3F9Z A;  5T5G A;  4QEP A;  2G46 A;  3KMJ A;  3M59 A;  4H12 A;  3M58 A;  1MVH A;  3M53 A;  4NJ5 A;  3F9Y A;  3OS5 A;  4YNM A;  4YPE A;  5ARF A;  5EX0 A;  1H3I A;  3MEK A;  3OPE A;  4J7F A;  3S7J A;  5F5E A;  4LDG A;  4J7I A;  1XQH A;  5TH7 A;  1N3J A;  3N71 A;  4YPU A;  5F59 A;  3K5K A;  3KMA A;  2F69 A;  3RU0 A;  5ARG A;  3HNA A;  5EG2 A;  4BUP A;  3KMT A;  4QEO A;  4I51 A;  5CPR B;  5AYF A;  5KJN A;  5JHN A;  3QWW A;  3CBO A;  5JIY A;  2W5Z A;  3M57 A;  2JV0 A;  5KJK A;  3S7D A;  4J83 A;  3SWC A;  3M55 A;  3F9X A;  3TG5 A;  3OOI A;  4FMU A;  3DB5 A; 
#chains in the Genus database with same CATH topology
 5CCM A;  1ML9 A;  3QWP A;  5T0K A;  3OXG A;  3VV0 A;  2R3A A;  2QPW A;  3TG4 A;  3BO5 A;  3MO2 A;  5CCL A;  4YNP A;  3PDN A;  3M5A A;  3FPD A;  5LSZ A;  3OXL A;  1MVX A;  4MI5 A;  2W5Y A;  3RAY A;  5HI7 A;  3S8P A;  3IHX A;  5LSX A;  2BQZ A;  4IJ8 A;  4O6F A;  4C1Q A;  1N6C A;  3RJW A;  4JLG A;  3QWV A;  4WUY A;  1N6A A;  5F6K C;  3MO0 A;  3DAL A;  4O30 A;  3F9W A;  4NVQ A;  5T0M A;  4YPA A;  4RZ0 A;  1MUF A;  2IGQ A;  1MT6 A;  4IJD A;  3S7B A;  3M54 A;  4MI0 A;  4QEN A;  1PEG A;  2RFI A;  3CBP A;  5F6L A;  2O8J A;  3VUZ A;  4E47 A;  5JJ0 A;  5KJL A;  3MO5 A;  5EX3 A;  3S7F A;  5HQ8 A;  3SW9 A;  1ZKK A;  3EP0 A;  1O9S A;  5TTF A;  3RIB A;  5KJM A;  4J8O A;  5TEG A;  4YND A;  3M56 A;  3RQ4 A;  4JDS A;  5JIN A;  4AU7 A;  3OXF A;  4Z4P A;  3CBM A;  3F9Z A;  5T5G A;  4QEP A;  2G46 A;  3KMJ A;  3M59 A;  4H12 A;  3M58 A;  1MVH A;  3M53 A;  4NJ5 A;  3F9Y A;  3OS5 A;  4YNM A;  4YPE A;  5ARF A;  5EX0 A;  1H3I A;  3MEK A;  3OPE A;  4J7F A;  3S7J A;  5F5E A;  4LDG A;  4J7I A;  1XQH A;  5TH7 A;  1N3J A;  3N71 A;  4YPU A;  5F59 A;  3K5K A;  3KMA A;  2F69 A;  3RU0 A;  5ARG A;  3HNA A;  5EG2 A;  4BUP A;  3KMT A;  4QEO A;  4I51 A;  5CPR B;  5AYF A;  5KJN A;  5JHN A;  3QWW A;  3CBO A;  5JIY A;  2W5Z A;  3M57 A;  2JV0 A;  5KJK A;  3S7D A;  4J83 A;  3SWC A;  3M55 A;  3F9X A;  3TG5 A;  3OOI A;  4FMU A;  3DB5 A; 
#chains in the Genus database with same CATH homology
 5CCM A;  1ML9 A;  3QWP A;  5T0K A;  3OXG A;  3VV0 A;  2R3A A;  2QPW A;  3TG4 A;  3BO5 A;  3MO2 A;  5CCL A;  4YNP A;  3PDN A;  3M5A A;  3FPD A;  5LSZ A;  3OXL A;  1MVX A;  4MI5 A;  2W5Y A;  3RAY A;  5HI7 A;  3S8P A;  3IHX A;  5LSX A;  2BQZ A;  4IJ8 A;  4O6F A;  4C1Q A;  1N6C A;  3RJW A;  4JLG A;  3QWV A;  4WUY A;  1N6A A;  5F6K C;  3MO0 A;  3DAL A;  4O30 A;  3F9W A;  4NVQ A;  5T0M A;  4YPA A;  4RZ0 A;  1MUF A;  2IGQ A;  1MT6 A;  4IJD A;  3S7B A;  3M54 A;  4MI0 A;  4QEN A;  1PEG A;  2RFI A;  3CBP A;  5F6L A;  2O8J A;  3VUZ A;  4E47 A;  5JJ0 A;  5KJL A;  3MO5 A;  5EX3 A;  3S7F A;  5HQ8 A;  3SW9 A;  1ZKK A;  3EP0 A;  1O9S A;  5TTF A;  3RIB A;  5KJM A;  4J8O A;  5TEG A;  4YND A;  3M56 A;  3RQ4 A;  4JDS A;  5JIN A;  4AU7 A;  3OXF A;  4Z4P A;  3CBM A;  3F9Z A;  5T5G A;  4QEP A;  2G46 A;  3KMJ A;  3M59 A;  4H12 A;  3M58 A;  1MVH A;  3M53 A;  4NJ5 A;  3F9Y A;  3OS5 A;  4YNM A;  4YPE A;  5ARF A;  5EX0 A;  1H3I A;  3MEK A;  3OPE A;  4J7F A;  3S7J A;  5F5E A;  4LDG A;  4J7I A;  1XQH A;  5TH7 A;  1N3J A;  3N71 A;  4YPU A;  5F59 A;  3K5K A;  3KMA A;  2F69 A;  3RU0 A;  5ARG A;  3HNA A;  5EG2 A;  4BUP A;  3KMT A;  4QEO A;  4I51 A;  5CPR B;  5AYF A;  5KJN A;  5JHN A;  3QWW A;  3CBO A;  5JIY A;  2W5Z A;  3M57 A;  2JV0 A;  5KJK A;  3S7D A;  4J83 A;  3SWC A;  3M55 A;  3F9X A;  3TG5 A;  3OOI A;  4FMU A;  3DB5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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