5JINA

Structure of g9a set-domain with histone h3k9m mutant peptide and bound s-adenosylmethionine
Total Genus 77
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
77
sequence length
273
structure length
273
Chain Sequence
IRTEKIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRNCKNRVVQSGIKVRLQLYRTAKMGWGVRALQTIPQGTFICEYVGELISDAEADVREDDSYLFDLDNKDGEVYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQCGSEKCKHSAEAIALEQSR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Homo sapiens
publication title S-adenosyl methionine is necessary for inhibition of the methyltransferase G9a by the lysine 9 to methionine mutation on histone H3.
pubmed doi rcsb
molecule keywords Histone-lysine N-methyltransferase EHMT2
total genus 77
structure length 273
sequence length 273
chains with identical sequence B
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2016-04-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00856 SET SET domain
A PF05033 Pre-SET Pre-SET motif
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 5jinA00
5CCMA 3RAYA 3VUZA 5JHNA 5KJNA 4LDGA 1MUFA 5T5GA 4FMUA 3M59A 5EG2A 2W5YA 3OXFA 4IJ8A 2IGQA 3M55A 4J7FA 3IHXA 1XQHA 3M54A 4MI5A 3MO2A 4YPAA 3BO5A 3M5AA 3CBOA 3MEKA 4I51A 3RU0A 4IJDA 4J7IA 3DALA 4JDSA 4NVQA 5LSXA 4O30A 3F9WA 3M58A 4JLGA 4AU7A 4YPEA 5HQ8A 4H12A 3F9XA 1O9SA 3OPEA 3PDNA 5JIYA 3OXLA 3S7DA 4E47A 5TH7A 5CCLA 1MVHA 3M57A 4WUYA 5JINA 5TEGA 4NJ5A 4RZ0A 3M56A 1ML9A 2O8JA 3DB5A 5F6LA 3OOIA 1N6CA 5EX3A 3SWCA 1MVXA 5CPRB 3N71A 5LSZA 4O6FA 4YPUA 3EP0A 2QPWA 5F59A 3VV0A 4YNPA 3RQ4A 3S8PA 4BUPA 5JJ0A 3MO5A 3KMJA 3OS5A 5F5EA 2R3AA 3OXGA 3S7BA 3MO0A 3KMTA 3QWPA 3CBPA 4QEPA 2JV0A 5HI7A 3S7JA 3CBMA 3SW9A 5T0MA 5AYFA 1ZKKA 5T0KA 4QENA 5KJKA 3TG4A 1MT6A 4YNMA 3RIBA 3S7FA 1PEGA 3TG5A 4QEOA 5KJLA 3K5KA 3QWWA 5F6KC 3RJWA 5KJMA 5ARFA 3QWVA 1N6AA 5ARGA 5EX0A 3F9YA 3HNAA 2F69A 2G46A 2BQZA 1N3JA 1H3IA 4MI0A 4Z4PA 3M53A 4J8OA 2RFIA 2W5ZA 3FPDA 4YNDA 4C1QA 3F9ZA 5TTFA 4J83A 3KMAA
chains in the Genus database with same CATH superfamily
5CCMA 3RAYA 3VUZA 5JHNA 5KJNA 4LDGA 1MUFA 5T5GA 4FMUA 3M59A 5EG2A 2W5YA 3OXFA 4IJ8A 2IGQA 3M55A 4J7FA 3IHXA 1XQHA 3M54A 4MI5A 3MO2A 4YPAA 3BO5A 3M5AA 3CBOA 3MEKA 4I51A 3RU0A 4IJDA 4J7IA 3DALA 4JDSA 4NVQA 5LSXA 4O30A 3F9WA 3M58A 4JLGA 4AU7A 4YPEA 5HQ8A 4H12A 3F9XA 1O9SA 3OPEA 3PDNA 5JIYA 3OXLA 3S7DA 4E47A 5TH7A 5CCLA 1MVHA 3M57A 4WUYA 5JINA 5TEGA 4NJ5A 4RZ0A 3M56A 1ML9A 2O8JA 3DB5A 5F6LA 3OOIA 1N6CA 5EX3A 3SWCA 1MVXA 5CPRB 3N71A 5LSZA 4O6FA 4YPUA 3EP0A 2QPWA 5F59A 3VV0A 4YNPA 3RQ4A 3S8PA 4BUPA 5JJ0A 3MO5A 3KMJA 3OS5A 5F5EA 2R3AA 3OXGA 3S7BA 3MO0A 3KMTA 3QWPA 3CBPA 4QEPA 2JV0A 5HI7A 3S7JA 3CBMA 3SW9A 5T0MA 5AYFA 1ZKKA 5T0KA 4QENA 5KJKA 3TG4A 1MT6A 4YNMA 3RIBA 3S7FA 1PEGA 3TG5A 4QEOA 5KJLA 3K5KA 3QWWA 5F6KC 3RJWA 5KJMA 5ARFA 3QWVA 1N6AA 5ARGA 5EX0A 3F9YA 3HNAA 2F69A 2G46A 2BQZA 1N3JA 1H3IA 4MI0A 4Z4PA 3M53A 4J8OA 2RFIA 2W5ZA 3FPDA 4YNDA 4C1QA 3F9ZA 5TTFA 4J83A 3KMAA
chains in the Genus database with same CATH topology
5CCMA 3RAYA 3VUZA 5JHNA 5KJNA 4LDGA 1MUFA 5T5GA 4FMUA 3M59A 5EG2A 2W5YA 3OXFA 4IJ8A 2IGQA 3M55A 4J7FA 3IHXA 1XQHA 3M54A 4MI5A 3MO2A 4YPAA 3BO5A 3M5AA 3CBOA 3MEKA 4I51A 3RU0A 4IJDA 4J7IA 3DALA 4JDSA 4NVQA 5LSXA 4O30A 3F9WA 3M58A 4JLGA 4AU7A 4YPEA 5HQ8A 4H12A 3F9XA 1O9SA 3OPEA 3PDNA 5JIYA 3OXLA 3S7DA 4E47A 5TH7A 5CCLA 1MVHA 3M57A 4WUYA 5JINA 5TEGA 4NJ5A 4RZ0A 3M56A 1ML9A 2O8JA 3DB5A 5F6LA 3OOIA 1N6CA 5EX3A 3SWCA 1MVXA 5CPRB 3N71A 5LSZA 4O6FA 4YPUA 3EP0A 2QPWA 5F59A 3VV0A 4YNPA 3RQ4A 3S8PA 4BUPA 5JJ0A 3MO5A 3KMJA 3OS5A 5F5EA 2R3AA 3OXGA 3S7BA 3MO0A 3KMTA 3QWPA 3CBPA 4QEPA 2JV0A 5HI7A 3S7JA 3CBMA 3SW9A 5T0MA 5AYFA 1ZKKA 5T0KA 4QENA 5KJKA 3TG4A 1MT6A 4YNMA 3RIBA 3S7FA 1PEGA 3TG5A 4QEOA 5KJLA 3K5KA 3QWWA 5F6KC 3RJWA 5KJMA 5ARFA 3QWVA 1N6AA 5ARGA 5EX0A 3F9YA 3HNAA 2F69A 2G46A 2BQZA 1N3JA 1H3IA 4MI0A 4Z4PA 3M53A 4J8OA 2RFIA 2W5ZA 3FPDA 4YNDA 4C1QA 3F9ZA 5TTFA 4J83A 3KMAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5CCM A;  3RAY A;  3VUZ A;  5JHN A;  5KJN A;  4LDG A;  1MUF A;  5T5G A;  4FMU A;  3M59 A;  5EG2 A;  2W5Y A;  3OXF A;  4IJ8 A;  2IGQ A;  3M55 A;  4J7F A;  3IHX A;  1XQH A;  3M54 A;  4MI5 A;  3MO2 A;  4YPA A;  3BO5 A;  3M5A A;  3CBO A;  3MEK A;  4I51 A;  3RU0 A;  4IJD A;  4J7I A;  3DAL A;  4JDS A;  4NVQ A;  5LSX A;  4O30 A;  3F9W A;  3M58 A;  4JLG A;  4AU7 A;  4YPE A;  5HQ8 A;  4H12 A;  3F9X A;  1O9S A;  3OPE A;  3PDN A;  5JIY A;  3OXL A;  3S7D A;  4E47 A;  5TH7 A;  5CCL A;  1MVH A;  3M57 A;  4WUY A;  5JIN A;  5TEG A;  4NJ5 A;  4RZ0 A;  3M56 A;  1ML9 A;  2O8J A;  3DB5 A;  5F6L A;  3OOI A;  1N6C A;  5EX3 A;  3SWC A;  1MVX A;  5CPR B;  3N71 A;  5LSZ A;  4O6F A;  4YPU A;  3EP0 A;  2QPW A;  5F59 A;  3VV0 A;  4YNP A;  3RQ4 A;  3S8P A;  4BUP A;  5JJ0 A;  3MO5 A;  3KMJ A;  3OS5 A;  5F5E A;  2R3A A;  3OXG A;  3S7B A;  3MO0 A;  3KMT A;  3QWP A;  3CBP A;  4QEP A;  2JV0 A;  5HI7 A;  3S7J A;  3CBM A;  3SW9 A;  5T0M A;  5AYF A;  1ZKK A;  5T0K A;  4QEN A;  5KJK A;  3TG4 A;  1MT6 A;  4YNM A;  3RIB A;  3S7F A;  1PEG A;  3TG5 A;  4QEO A;  5KJL A;  3K5K A;  3QWW A;  5F6K C;  3RJW A;  5KJM A;  5ARF A;  3QWV A;  1N6A A;  5ARG A;  5EX0 A;  3F9Y A;  3HNA A;  2F69 A;  2G46 A;  2BQZ A;  1N3J A;  1H3I A;  4MI0 A;  4Z4P A;  3M53 A;  4J8O A;  2RFI A;  2W5Z A;  3FPD A;  4YND A;  4C1Q A;  3F9Z A;  5TTF A;  4J83 A;  3KMA A; 
#chains in the Genus database with same CATH topology
 5CCM A;  3RAY A;  3VUZ A;  5JHN A;  5KJN A;  4LDG A;  1MUF A;  5T5G A;  4FMU A;  3M59 A;  5EG2 A;  2W5Y A;  3OXF A;  4IJ8 A;  2IGQ A;  3M55 A;  4J7F A;  3IHX A;  1XQH A;  3M54 A;  4MI5 A;  3MO2 A;  4YPA A;  3BO5 A;  3M5A A;  3CBO A;  3MEK A;  4I51 A;  3RU0 A;  4IJD A;  4J7I A;  3DAL A;  4JDS A;  4NVQ A;  5LSX A;  4O30 A;  3F9W A;  3M58 A;  4JLG A;  4AU7 A;  4YPE A;  5HQ8 A;  4H12 A;  3F9X A;  1O9S A;  3OPE A;  3PDN A;  5JIY A;  3OXL A;  3S7D A;  4E47 A;  5TH7 A;  5CCL A;  1MVH A;  3M57 A;  4WUY A;  5JIN A;  5TEG A;  4NJ5 A;  4RZ0 A;  3M56 A;  1ML9 A;  2O8J A;  3DB5 A;  5F6L A;  3OOI A;  1N6C A;  5EX3 A;  3SWC A;  1MVX A;  5CPR B;  3N71 A;  5LSZ A;  4O6F A;  4YPU A;  3EP0 A;  2QPW A;  5F59 A;  3VV0 A;  4YNP A;  3RQ4 A;  3S8P A;  4BUP A;  5JJ0 A;  3MO5 A;  3KMJ A;  3OS5 A;  5F5E A;  2R3A A;  3OXG A;  3S7B A;  3MO0 A;  3KMT A;  3QWP A;  3CBP A;  4QEP A;  2JV0 A;  5HI7 A;  3S7J A;  3CBM A;  3SW9 A;  5T0M A;  5AYF A;  1ZKK A;  5T0K A;  4QEN A;  5KJK A;  3TG4 A;  1MT6 A;  4YNM A;  3RIB A;  3S7F A;  1PEG A;  3TG5 A;  4QEO A;  5KJL A;  3K5K A;  3QWW A;  5F6K C;  3RJW A;  5KJM A;  5ARF A;  3QWV A;  1N6A A;  5ARG A;  5EX0 A;  3F9Y A;  3HNA A;  2F69 A;  2G46 A;  2BQZ A;  1N3J A;  1H3I A;  4MI0 A;  4Z4P A;  3M53 A;  4J8O A;  2RFI A;  2W5Z A;  3FPD A;  4YND A;  4C1Q A;  3F9Z A;  5TTF A;  4J83 A;  3KMA A; 
#chains in the Genus database with same CATH homology
 5CCM A;  3RAY A;  3VUZ A;  5JHN A;  5KJN A;  4LDG A;  1MUF A;  5T5G A;  4FMU A;  3M59 A;  5EG2 A;  2W5Y A;  3OXF A;  4IJ8 A;  2IGQ A;  3M55 A;  4J7F A;  3IHX A;  1XQH A;  3M54 A;  4MI5 A;  3MO2 A;  4YPA A;  3BO5 A;  3M5A A;  3CBO A;  3MEK A;  4I51 A;  3RU0 A;  4IJD A;  4J7I A;  3DAL A;  4JDS A;  4NVQ A;  5LSX A;  4O30 A;  3F9W A;  3M58 A;  4JLG A;  4AU7 A;  4YPE A;  5HQ8 A;  4H12 A;  3F9X A;  1O9S A;  3OPE A;  3PDN A;  5JIY A;  3OXL A;  3S7D A;  4E47 A;  5TH7 A;  5CCL A;  1MVH A;  3M57 A;  4WUY A;  5JIN A;  5TEG A;  4NJ5 A;  4RZ0 A;  3M56 A;  1ML9 A;  2O8J A;  3DB5 A;  5F6L A;  3OOI A;  1N6C A;  5EX3 A;  3SWC A;  1MVX A;  5CPR B;  3N71 A;  5LSZ A;  4O6F A;  4YPU A;  3EP0 A;  2QPW A;  5F59 A;  3VV0 A;  4YNP A;  3RQ4 A;  3S8P A;  4BUP A;  5JJ0 A;  3MO5 A;  3KMJ A;  3OS5 A;  5F5E A;  2R3A A;  3OXG A;  3S7B A;  3MO0 A;  3KMT A;  3QWP A;  3CBP A;  4QEP A;  2JV0 A;  5HI7 A;  3S7J A;  3CBM A;  3SW9 A;  5T0M A;  5AYF A;  1ZKK A;  5T0K A;  4QEN A;  5KJK A;  3TG4 A;  1MT6 A;  4YNM A;  3RIB A;  3S7F A;  1PEG A;  3TG5 A;  4QEO A;  5KJL A;  3K5K A;  3QWW A;  5F6K C;  3RJW A;  5KJM A;  5ARF A;  3QWV A;  1N6A A;  5ARG A;  5EX0 A;  3F9Y A;  3HNA A;  2F69 A;  2G46 A;  2BQZ A;  1N3J A;  1H3I A;  4MI0 A;  4Z4P A;  3M53 A;  4J8O A;  2RFI A;  2W5Z A;  3FPD A;  4YND A;  4C1Q A;  3F9Z A;  5TTF A;  4J83 A;  3KMA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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