5F59A

The crystal structure of mll3 set domain
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
154
structure length
148
Chain Sequence
SKSSQYRKMKTEWKSNVYLARSRIQGLGLYAARDIEKHTMVIEYIGTIIRNEVANRKEKLYESQNRGVYMFRMDNDHVIDATLTGGPARYINHSCAPNCVAEVVTFERGHKIIISSSRRIQKGEELCYDYKFDKIPCHCGAVNCRKWM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Homo sapiens
publication title Structural basis for activity regulation of MLL family methyltransferases.
pubmed doi rcsb
molecule keywords Histone-lysine N-methyltransferase 2C
total genus 38
structure length 148
sequence length 154
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2015-12-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00856 SET SET domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 5f59A00
4IJ8A 4WUYA 5T0MA 5T0KA 2F69A 5JINA 4AU7A 4YPAA 3IHXA 5F6LA 1N6CA 3OS5A 5ARFA 4YNPA 5TEGA 3VV0A 3CBOA 3HNAA 1N6AA 3RIBA 5JIYA 2BQZA 3CBPA 2JV0A 4NVQA 5KJLA 4IJDA 4Z4PA 3M58A 1N3JA 3F9YA 3DB5A 3OXLA 1ML9A 4QENA 4J7FA 3MO2A 3SW9A 4LDGA 4NJ5A 4I51A 3OPEA 3RQ4A 4C1QA 3F9XA 1XQHA 5ARGA 5TTFA 5F6KC 3MEKA 3N71A 3M55A 4RZ0A 3M57A 3QWWA 3SWCA 3M53A 5CPRB 1MUFA 2W5ZA 2O8JA 5KJMA 5LSZA 3M54A 3M59A 3TG4A 3OXGA 3PDNA 4YPUA 2W5YA 3M5AA 1PEGA 4FMUA 5JHNA 4MI0A 3OXFA 5HQ8A 1ZKKA 2IGQA 3S7FA 4BUPA 4JDSA 1MVHA 5CCMA 3QWPA 5HI7A 3M56A 3RU0A 5LSXA 1H3IA 3RJWA 3CBMA 2RFIA 4YPEA 3S7BA 3RAYA 3KMAA 5F5EA 5KJKA 4YNMA 4H12A 3S8PA 3S7JA 5T5GA 2R3AA 3TG5A 4E47A 5F59A 3F9WA 4J7IA 3FPDA 4J8OA 5EG2A 3EP0A 5JJ0A 3S7DA 4O30A 1O9SA 5EX3A 4MI5A 4O6FA 3MO5A 4QEOA 3BO5A 3DALA 3KMJA 5KJNA 5TH7A 5CCLA 1MVXA 3OOIA 4QEPA 3F9ZA 4J83A 2QPWA 3QWVA 3MO0A 4YNDA 2G46A 5AYFA 4JLGA 3VUZA 3KMTA 1MT6A 3K5KA 5EX0A
chains in the Genus database with same CATH superfamily
4IJ8A 4WUYA 5T0MA 5T0KA 2F69A 5JINA 4AU7A 4YPAA 3IHXA 5F6LA 1N6CA 3OS5A 5ARFA 4YNPA 5TEGA 3VV0A 3CBOA 3HNAA 1N6AA 3RIBA 5JIYA 2BQZA 3CBPA 2JV0A 4NVQA 5KJLA 4IJDA 4Z4PA 3M58A 1N3JA 3F9YA 3DB5A 3OXLA 1ML9A 4QENA 4J7FA 3MO2A 3SW9A 4LDGA 4NJ5A 4I51A 3OPEA 3RQ4A 4C1QA 3F9XA 1XQHA 5ARGA 5TTFA 5F6KC 3MEKA 3N71A 3M55A 4RZ0A 3M57A 3QWWA 3SWCA 3M53A 5CPRB 1MUFA 2W5ZA 2O8JA 5KJMA 5LSZA 3M54A 3M59A 3TG4A 3OXGA 3PDNA 4YPUA 2W5YA 3M5AA 1PEGA 4FMUA 5JHNA 4MI0A 3OXFA 5HQ8A 1ZKKA 2IGQA 3S7FA 4BUPA 4JDSA 1MVHA 5CCMA 3QWPA 5HI7A 3M56A 3RU0A 5LSXA 1H3IA 3RJWA 3CBMA 2RFIA 4YPEA 3S7BA 3RAYA 3KMAA 5F5EA 5KJKA 4YNMA 4H12A 3S8PA 3S7JA 5T5GA 2R3AA 3TG5A 4E47A 5F59A 3F9WA 4J7IA 3FPDA 4J8OA 5EG2A 3EP0A 5JJ0A 3S7DA 4O30A 1O9SA 5EX3A 4MI5A 4O6FA 3MO5A 4QEOA 3BO5A 3DALA 3KMJA 5KJNA 5TH7A 5CCLA 1MVXA 3OOIA 4QEPA 3F9ZA 4J83A 2QPWA 3QWVA 3MO0A 4YNDA 2G46A 5AYFA 4JLGA 3VUZA 3KMTA 1MT6A 3K5KA 5EX0A
chains in the Genus database with same CATH topology
4IJ8A 4WUYA 5T0MA 5T0KA 2F69A 5JINA 4AU7A 4YPAA 3IHXA 5F6LA 1N6CA 3OS5A 5ARFA 4YNPA 5TEGA 3VV0A 3CBOA 3HNAA 1N6AA 3RIBA 5JIYA 2BQZA 3CBPA 2JV0A 4NVQA 5KJLA 4IJDA 4Z4PA 3M58A 1N3JA 3F9YA 3DB5A 3OXLA 1ML9A 4QENA 4J7FA 3MO2A 3SW9A 4LDGA 4NJ5A 4I51A 3OPEA 3RQ4A 4C1QA 3F9XA 1XQHA 5ARGA 5TTFA 5F6KC 3MEKA 3N71A 3M55A 4RZ0A 3M57A 3QWWA 3SWCA 3M53A 5CPRB 1MUFA 2W5ZA 2O8JA 5KJMA 5LSZA 3M54A 3M59A 3TG4A 3OXGA 3PDNA 4YPUA 2W5YA 3M5AA 1PEGA 4FMUA 5JHNA 4MI0A 3OXFA 5HQ8A 1ZKKA 2IGQA 3S7FA 4BUPA 4JDSA 1MVHA 5CCMA 3QWPA 5HI7A 3M56A 3RU0A 5LSXA 1H3IA 3RJWA 3CBMA 2RFIA 4YPEA 3S7BA 3RAYA 3KMAA 5F5EA 5KJKA 4YNMA 4H12A 3S8PA 3S7JA 5T5GA 2R3AA 3TG5A 4E47A 5F59A 3F9WA 4J7IA 3FPDA 4J8OA 5EG2A 3EP0A 5JJ0A 3S7DA 4O30A 1O9SA 5EX3A 4MI5A 4O6FA 3MO5A 4QEOA 3BO5A 3DALA 3KMJA 5KJNA 5TH7A 5CCLA 1MVXA 3OOIA 4QEPA 3F9ZA 4J83A 2QPWA 3QWVA 3MO0A 4YNDA 2G46A 5AYFA 4JLGA 3VUZA 3KMTA 1MT6A 3K5KA 5EX0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IJ8 A;  4WUY A;  5T0M A;  5T0K A;  2F69 A;  5JIN A;  4AU7 A;  4YPA A;  3IHX A;  5F6L A;  1N6C A;  3OS5 A;  5ARF A;  4YNP A;  5TEG A;  3VV0 A;  3CBO A;  3HNA A;  1N6A A;  3RIB A;  5JIY A;  2BQZ A;  3CBP A;  2JV0 A;  4NVQ A;  5KJL A;  4IJD A;  4Z4P A;  3M58 A;  1N3J A;  3F9Y A;  3DB5 A;  3OXL A;  1ML9 A;  4QEN A;  4J7F A;  3MO2 A;  3SW9 A;  4LDG A;  4NJ5 A;  4I51 A;  3OPE A;  3RQ4 A;  4C1Q A;  3F9X A;  1XQH A;  5ARG A;  5TTF A;  5F6K C;  3MEK A;  3N71 A;  3M55 A;  4RZ0 A;  3M57 A;  3QWW A;  3SWC A;  3M53 A;  5CPR B;  1MUF A;  2W5Z A;  2O8J A;  5KJM A;  5LSZ A;  3M54 A;  3M59 A;  3TG4 A;  3OXG A;  3PDN A;  4YPU A;  2W5Y A;  3M5A A;  1PEG A;  4FMU A;  5JHN A;  4MI0 A;  3OXF A;  5HQ8 A;  1ZKK A;  2IGQ A;  3S7F A;  4BUP A;  4JDS A;  1MVH A;  5CCM A;  3QWP A;  5HI7 A;  3M56 A;  3RU0 A;  5LSX A;  1H3I A;  3RJW A;  3CBM A;  2RFI A;  4YPE A;  3S7B A;  3RAY A;  3KMA A;  5F5E A;  5KJK A;  4YNM A;  4H12 A;  3S8P A;  3S7J A;  5T5G A;  2R3A A;  3TG5 A;  4E47 A;  5F59 A;  3F9W A;  4J7I A;  3FPD A;  4J8O A;  5EG2 A;  3EP0 A;  5JJ0 A;  3S7D A;  4O30 A;  1O9S A;  5EX3 A;  4MI5 A;  4O6F A;  3MO5 A;  4QEO A;  3BO5 A;  3DAL A;  3KMJ A;  5KJN A;  5TH7 A;  5CCL A;  1MVX A;  3OOI A;  4QEP A;  3F9Z A;  4J83 A;  2QPW A;  3QWV A;  3MO0 A;  4YND A;  2G46 A;  5AYF A;  4JLG A;  3VUZ A;  3KMT A;  1MT6 A;  3K5K A;  5EX0 A; 
#chains in the Genus database with same CATH topology
 4IJ8 A;  4WUY A;  5T0M A;  5T0K A;  2F69 A;  5JIN A;  4AU7 A;  4YPA A;  3IHX A;  5F6L A;  1N6C A;  3OS5 A;  5ARF A;  4YNP A;  5TEG A;  3VV0 A;  3CBO A;  3HNA A;  1N6A A;  3RIB A;  5JIY A;  2BQZ A;  3CBP A;  2JV0 A;  4NVQ A;  5KJL A;  4IJD A;  4Z4P A;  3M58 A;  1N3J A;  3F9Y A;  3DB5 A;  3OXL A;  1ML9 A;  4QEN A;  4J7F A;  3MO2 A;  3SW9 A;  4LDG A;  4NJ5 A;  4I51 A;  3OPE A;  3RQ4 A;  4C1Q A;  3F9X A;  1XQH A;  5ARG A;  5TTF A;  5F6K C;  3MEK A;  3N71 A;  3M55 A;  4RZ0 A;  3M57 A;  3QWW A;  3SWC A;  3M53 A;  5CPR B;  1MUF A;  2W5Z A;  2O8J A;  5KJM A;  5LSZ A;  3M54 A;  3M59 A;  3TG4 A;  3OXG A;  3PDN A;  4YPU A;  2W5Y A;  3M5A A;  1PEG A;  4FMU A;  5JHN A;  4MI0 A;  3OXF A;  5HQ8 A;  1ZKK A;  2IGQ A;  3S7F A;  4BUP A;  4JDS A;  1MVH A;  5CCM A;  3QWP A;  5HI7 A;  3M56 A;  3RU0 A;  5LSX A;  1H3I A;  3RJW A;  3CBM A;  2RFI A;  4YPE A;  3S7B A;  3RAY A;  3KMA A;  5F5E A;  5KJK A;  4YNM A;  4H12 A;  3S8P A;  3S7J A;  5T5G A;  2R3A A;  3TG5 A;  4E47 A;  5F59 A;  3F9W A;  4J7I A;  3FPD A;  4J8O A;  5EG2 A;  3EP0 A;  5JJ0 A;  3S7D A;  4O30 A;  1O9S A;  5EX3 A;  4MI5 A;  4O6F A;  3MO5 A;  4QEO A;  3BO5 A;  3DAL A;  3KMJ A;  5KJN A;  5TH7 A;  5CCL A;  1MVX A;  3OOI A;  4QEP A;  3F9Z A;  4J83 A;  2QPW A;  3QWV A;  3MO0 A;  4YND A;  2G46 A;  5AYF A;  4JLG A;  3VUZ A;  3KMT A;  1MT6 A;  3K5K A;  5EX0 A; 
#chains in the Genus database with same CATH homology
 4IJ8 A;  4WUY A;  5T0M A;  5T0K A;  2F69 A;  5JIN A;  4AU7 A;  4YPA A;  3IHX A;  5F6L A;  1N6C A;  3OS5 A;  5ARF A;  4YNP A;  5TEG A;  3VV0 A;  3CBO A;  3HNA A;  1N6A A;  3RIB A;  5JIY A;  2BQZ A;  3CBP A;  2JV0 A;  4NVQ A;  5KJL A;  4IJD A;  4Z4P A;  3M58 A;  1N3J A;  3F9Y A;  3DB5 A;  3OXL A;  1ML9 A;  4QEN A;  4J7F A;  3MO2 A;  3SW9 A;  4LDG A;  4NJ5 A;  4I51 A;  3OPE A;  3RQ4 A;  4C1Q A;  3F9X A;  1XQH A;  5ARG A;  5TTF A;  5F6K C;  3MEK A;  3N71 A;  3M55 A;  4RZ0 A;  3M57 A;  3QWW A;  3SWC A;  3M53 A;  5CPR B;  1MUF A;  2W5Z A;  2O8J A;  5KJM A;  5LSZ A;  3M54 A;  3M59 A;  3TG4 A;  3OXG A;  3PDN A;  4YPU A;  2W5Y A;  3M5A A;  1PEG A;  4FMU A;  5JHN A;  4MI0 A;  3OXF A;  5HQ8 A;  1ZKK A;  2IGQ A;  3S7F A;  4BUP A;  4JDS A;  1MVH A;  5CCM A;  3QWP A;  5HI7 A;  3M56 A;  3RU0 A;  5LSX A;  1H3I A;  3RJW A;  3CBM A;  2RFI A;  4YPE A;  3S7B A;  3RAY A;  3KMA A;  5F5E A;  5KJK A;  4YNM A;  4H12 A;  3S8P A;  3S7J A;  5T5G A;  2R3A A;  3TG5 A;  4E47 A;  5F59 A;  3F9W A;  4J7I A;  3FPD A;  4J8O A;  5EG2 A;  3EP0 A;  5JJ0 A;  3S7D A;  4O30 A;  1O9S A;  5EX3 A;  4MI5 A;  4O6F A;  3MO5 A;  4QEO A;  3BO5 A;  3DAL A;  3KMJ A;  5KJN A;  5TH7 A;  5CCL A;  1MVX A;  3OOI A;  4QEP A;  3F9Z A;  4J83 A;  2QPW A;  3QWV A;  3MO0 A;  4YND A;  2G46 A;  5AYF A;  4JLG A;  3VUZ A;  3KMT A;  1MT6 A;  3K5K A;  5EX0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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