5T0KA

Structure of g9a set-domain with h3k9m mutant peptide and sam
Total Genus 72
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
72
sequence length
268
structure length
264
Chain Sequence
KIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRNCKNRVVQSGIKVRLQLYRTAKMGWGVRALQTIPQGTFICEYVGELISDAEADVREDDSYLFDLDEVYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQCGSEKCKHSAEAIALEQS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Histone-lysine N-methyltransferase EHMT2
publication title A histone H3K9M mutation traps histone methyltransferase Clr4 to prevent heterochromatin spreading.
pubmed doi rcsb
source organism Homo sapiens
total genus 72
structure length 264
sequence length 268
chains with identical sequence B
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2016-08-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00856 SET SET domain
A PF05033 Pre-SET Pre-SET motif
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 5t0kA00
3HNAA 3K5KA 4J7FA 4RZ0A 5EX3A 5F5EA 4YNPA 3RJWA 3VUZA 3KMTA 1N6CA 5LSZA 3CBOA 2W5YA 5KJKA 5CCMA 3OXLA 3QWWA 4BUPA 3M58A 4MI0A 5JINA 5F6KC 5F59A 3F9WA 3OXFA 4IJ8A 1XQHA 5KJNA 5JIYA 3MEKA 3PDNA 4O6FA 1MT6A 3RIBA 1MVHA 3S7DA 3OPEA 4FMUA 4YPEA 5T0MA 5KJMA 5JHNA 4JDSA 3SW9A 3S7FA 3SWCA 5EG2A 5TEGA 2RFIA 3RU0A 3MO0A 2G46A 4YNDA 5ARFA 4I51A 3RQ4A 1ZKKA 4YPAA 1H3IA 1PEGA 3KMJA 2BQZA 3QWVA 4QENA 4O30A 3MO5A 4QEOA 3OOIA 3OXGA 3RAYA 3F9YA 3TG5A 3KMAA 5HQ8A 4WUYA 4QEPA 3F9XA 4YPUA 5CCLA 3FPDA 4H12A 3EP0A 3M53A 3OS5A 4YNMA 3S7JA 5KJLA 3DB5A 4MI5A 5JJ0A 3M54A 1N6AA 4J8OA 3DALA 2W5ZA 3TG4A 5EX0A 3S8PA 3CBMA 4NJ5A 2F69A 2IGQA 1N3JA 3MO2A 5T0KA 1O9SA 4IJDA 4J83A 3IHXA 5F6LA 4NVQA 3CBPA 4LDGA 5AYFA 3QWPA 3VV0A 1MVXA 4AU7A 4JLGA 3N71A 3S7BA 1MUFA 5HI7A 3M57A 5TH7A 4E47A 3M56A 4Z4PA 2JV0A 4C1QA 5T5GA 5TTFA 3F9ZA 2R3AA 3M59A 5CPRB 2QPWA 1ML9A 4J7IA 3BO5A 5LSXA 3M55A 2O8JA 5ARGA 3M5AA
chains in the Genus database with same CATH superfamily
3HNAA 3K5KA 4J7FA 4RZ0A 5EX3A 5F5EA 4YNPA 3RJWA 3VUZA 3KMTA 1N6CA 5LSZA 3CBOA 2W5YA 5KJKA 5CCMA 3OXLA 3QWWA 4BUPA 3M58A 4MI0A 5JINA 5F6KC 5F59A 3F9WA 3OXFA 4IJ8A 1XQHA 5KJNA 5JIYA 3MEKA 3PDNA 4O6FA 1MT6A 3RIBA 1MVHA 3S7DA 3OPEA 4FMUA 4YPEA 5T0MA 5KJMA 5JHNA 4JDSA 3SW9A 3S7FA 3SWCA 5EG2A 5TEGA 2RFIA 3RU0A 3MO0A 2G46A 4YNDA 5ARFA 4I51A 3RQ4A 1ZKKA 4YPAA 1H3IA 1PEGA 3KMJA 2BQZA 3QWVA 4QENA 4O30A 3MO5A 4QEOA 3OOIA 3OXGA 3RAYA 3F9YA 3TG5A 3KMAA 5HQ8A 4WUYA 4QEPA 3F9XA 4YPUA 5CCLA 3FPDA 4H12A 3EP0A 3M53A 3OS5A 4YNMA 3S7JA 5KJLA 3DB5A 4MI5A 5JJ0A 3M54A 1N6AA 4J8OA 3DALA 2W5ZA 3TG4A 5EX0A 3S8PA 3CBMA 4NJ5A 2F69A 2IGQA 1N3JA 3MO2A 5T0KA 1O9SA 4IJDA 4J83A 3IHXA 5F6LA 4NVQA 3CBPA 4LDGA 5AYFA 3QWPA 3VV0A 1MVXA 4AU7A 4JLGA 3N71A 3S7BA 1MUFA 5HI7A 3M57A 5TH7A 4E47A 3M56A 4Z4PA 2JV0A 4C1QA 5T5GA 5TTFA 3F9ZA 2R3AA 3M59A 5CPRB 2QPWA 1ML9A 4J7IA 3BO5A 5LSXA 3M55A 2O8JA 5ARGA 3M5AA
chains in the Genus database with same CATH topology
3HNAA 3K5KA 4J7FA 4RZ0A 5EX3A 5F5EA 4YNPA 3RJWA 3VUZA 3KMTA 1N6CA 5LSZA 3CBOA 2W5YA 5KJKA 5CCMA 3OXLA 3QWWA 4BUPA 3M58A 4MI0A 5JINA 5F6KC 5F59A 3F9WA 3OXFA 4IJ8A 1XQHA 5KJNA 5JIYA 3MEKA 3PDNA 4O6FA 1MT6A 3RIBA 1MVHA 3S7DA 3OPEA 4FMUA 4YPEA 5T0MA 5KJMA 5JHNA 4JDSA 3SW9A 3S7FA 3SWCA 5EG2A 5TEGA 2RFIA 3RU0A 3MO0A 2G46A 4YNDA 5ARFA 4I51A 3RQ4A 1ZKKA 4YPAA 1H3IA 1PEGA 3KMJA 2BQZA 3QWVA 4QENA 4O30A 3MO5A 4QEOA 3OOIA 3OXGA 3RAYA 3F9YA 3TG5A 3KMAA 5HQ8A 4WUYA 4QEPA 3F9XA 4YPUA 5CCLA 3FPDA 4H12A 3EP0A 3M53A 3OS5A 4YNMA 3S7JA 5KJLA 3DB5A 4MI5A 5JJ0A 3M54A 1N6AA 4J8OA 3DALA 2W5ZA 3TG4A 5EX0A 3S8PA 3CBMA 4NJ5A 2F69A 2IGQA 1N3JA 3MO2A 5T0KA 1O9SA 4IJDA 4J83A 3IHXA 5F6LA 4NVQA 3CBPA 4LDGA 5AYFA 3QWPA 3VV0A 1MVXA 4AU7A 4JLGA 3N71A 3S7BA 1MUFA 5HI7A 3M57A 5TH7A 4E47A 3M56A 4Z4PA 2JV0A 4C1QA 5T5GA 5TTFA 3F9ZA 2R3AA 3M59A 5CPRB 2QPWA 1ML9A 4J7IA 3BO5A 5LSXA 3M55A 2O8JA 5ARGA 3M5AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HNA A;  3K5K A;  4J7F A;  4RZ0 A;  5EX3 A;  5F5E A;  4YNP A;  3RJW A;  3VUZ A;  3KMT A;  1N6C A;  5LSZ A;  3CBO A;  2W5Y A;  5KJK A;  5CCM A;  3OXL A;  3QWW A;  4BUP A;  3M58 A;  4MI0 A;  5JIN A;  5F6K C;  5F59 A;  3F9W A;  3OXF A;  4IJ8 A;  1XQH A;  5KJN A;  5JIY A;  3MEK A;  3PDN A;  4O6F A;  1MT6 A;  3RIB A;  1MVH A;  3S7D A;  3OPE A;  4FMU A;  4YPE A;  5T0M A;  5KJM A;  5JHN A;  4JDS A;  3SW9 A;  3S7F A;  3SWC A;  5EG2 A;  5TEG A;  2RFI A;  3RU0 A;  3MO0 A;  2G46 A;  4YND A;  5ARF A;  4I51 A;  3RQ4 A;  1ZKK A;  4YPA A;  1H3I A;  1PEG A;  3KMJ A;  2BQZ A;  3QWV A;  4QEN A;  4O30 A;  3MO5 A;  4QEO A;  3OOI A;  3OXG A;  3RAY A;  3F9Y A;  3TG5 A;  3KMA A;  5HQ8 A;  4WUY A;  4QEP A;  3F9X A;  4YPU A;  5CCL A;  3FPD A;  4H12 A;  3EP0 A;  3M53 A;  3OS5 A;  4YNM A;  3S7J A;  5KJL A;  3DB5 A;  4MI5 A;  5JJ0 A;  3M54 A;  1N6A A;  4J8O A;  3DAL A;  2W5Z A;  3TG4 A;  5EX0 A;  3S8P A;  3CBM A;  4NJ5 A;  2F69 A;  2IGQ A;  1N3J A;  3MO2 A;  5T0K A;  1O9S A;  4IJD A;  4J83 A;  3IHX A;  5F6L A;  4NVQ A;  3CBP A;  4LDG A;  5AYF A;  3QWP A;  3VV0 A;  1MVX A;  4AU7 A;  4JLG A;  3N71 A;  3S7B A;  1MUF A;  5HI7 A;  3M57 A;  5TH7 A;  4E47 A;  3M56 A;  4Z4P A;  2JV0 A;  4C1Q A;  5T5G A;  5TTF A;  3F9Z A;  2R3A A;  3M59 A;  5CPR B;  2QPW A;  1ML9 A;  4J7I A;  3BO5 A;  5LSX A;  3M55 A;  2O8J A;  5ARG A;  3M5A A; 
#chains in the Genus database with same CATH topology
 3HNA A;  3K5K A;  4J7F A;  4RZ0 A;  5EX3 A;  5F5E A;  4YNP A;  3RJW A;  3VUZ A;  3KMT A;  1N6C A;  5LSZ A;  3CBO A;  2W5Y A;  5KJK A;  5CCM A;  3OXL A;  3QWW A;  4BUP A;  3M58 A;  4MI0 A;  5JIN A;  5F6K C;  5F59 A;  3F9W A;  3OXF A;  4IJ8 A;  1XQH A;  5KJN A;  5JIY A;  3MEK A;  3PDN A;  4O6F A;  1MT6 A;  3RIB A;  1MVH A;  3S7D A;  3OPE A;  4FMU A;  4YPE A;  5T0M A;  5KJM A;  5JHN A;  4JDS A;  3SW9 A;  3S7F A;  3SWC A;  5EG2 A;  5TEG A;  2RFI A;  3RU0 A;  3MO0 A;  2G46 A;  4YND A;  5ARF A;  4I51 A;  3RQ4 A;  1ZKK A;  4YPA A;  1H3I A;  1PEG A;  3KMJ A;  2BQZ A;  3QWV A;  4QEN A;  4O30 A;  3MO5 A;  4QEO A;  3OOI A;  3OXG A;  3RAY A;  3F9Y A;  3TG5 A;  3KMA A;  5HQ8 A;  4WUY A;  4QEP A;  3F9X A;  4YPU A;  5CCL A;  3FPD A;  4H12 A;  3EP0 A;  3M53 A;  3OS5 A;  4YNM A;  3S7J A;  5KJL A;  3DB5 A;  4MI5 A;  5JJ0 A;  3M54 A;  1N6A A;  4J8O A;  3DAL A;  2W5Z A;  3TG4 A;  5EX0 A;  3S8P A;  3CBM A;  4NJ5 A;  2F69 A;  2IGQ A;  1N3J A;  3MO2 A;  5T0K A;  1O9S A;  4IJD A;  4J83 A;  3IHX A;  5F6L A;  4NVQ A;  3CBP A;  4LDG A;  5AYF A;  3QWP A;  3VV0 A;  1MVX A;  4AU7 A;  4JLG A;  3N71 A;  3S7B A;  1MUF A;  5HI7 A;  3M57 A;  5TH7 A;  4E47 A;  3M56 A;  4Z4P A;  2JV0 A;  4C1Q A;  5T5G A;  5TTF A;  3F9Z A;  2R3A A;  3M59 A;  5CPR B;  2QPW A;  1ML9 A;  4J7I A;  3BO5 A;  5LSX A;  3M55 A;  2O8J A;  5ARG A;  3M5A A; 
#chains in the Genus database with same CATH homology
 3HNA A;  3K5K A;  4J7F A;  4RZ0 A;  5EX3 A;  5F5E A;  4YNP A;  3RJW A;  3VUZ A;  3KMT A;  1N6C A;  5LSZ A;  3CBO A;  2W5Y A;  5KJK A;  5CCM A;  3OXL A;  3QWW A;  4BUP A;  3M58 A;  4MI0 A;  5JIN A;  5F6K C;  5F59 A;  3F9W A;  3OXF A;  4IJ8 A;  1XQH A;  5KJN A;  5JIY A;  3MEK A;  3PDN A;  4O6F A;  1MT6 A;  3RIB A;  1MVH A;  3S7D A;  3OPE A;  4FMU A;  4YPE A;  5T0M A;  5KJM A;  5JHN A;  4JDS A;  3SW9 A;  3S7F A;  3SWC A;  5EG2 A;  5TEG A;  2RFI A;  3RU0 A;  3MO0 A;  2G46 A;  4YND A;  5ARF A;  4I51 A;  3RQ4 A;  1ZKK A;  4YPA A;  1H3I A;  1PEG A;  3KMJ A;  2BQZ A;  3QWV A;  4QEN A;  4O30 A;  3MO5 A;  4QEO A;  3OOI A;  3OXG A;  3RAY A;  3F9Y A;  3TG5 A;  3KMA A;  5HQ8 A;  4WUY A;  4QEP A;  3F9X A;  4YPU A;  5CCL A;  3FPD A;  4H12 A;  3EP0 A;  3M53 A;  3OS5 A;  4YNM A;  3S7J A;  5KJL A;  3DB5 A;  4MI5 A;  5JJ0 A;  3M54 A;  1N6A A;  4J8O A;  3DAL A;  2W5Z A;  3TG4 A;  5EX0 A;  3S8P A;  3CBM A;  4NJ5 A;  2F69 A;  2IGQ A;  1N3J A;  3MO2 A;  5T0K A;  1O9S A;  4IJD A;  4J83 A;  3IHX A;  5F6L A;  4NVQ A;  3CBP A;  4LDG A;  5AYF A;  3QWP A;  3VV0 A;  1MVX A;  4AU7 A;  4JLG A;  3N71 A;  3S7B A;  1MUF A;  5HI7 A;  3M57 A;  5TH7 A;  4E47 A;  3M56 A;  4Z4P A;  2JV0 A;  4C1Q A;  5T5G A;  5TTF A;  3F9Z A;  2R3A A;  3M59 A;  5CPR B;  2QPW A;  1ML9 A;  4J7I A;  3BO5 A;  5LSX A;  3M55 A;  2O8J A;  5ARG A;  3M5A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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