1VIQ | Genus

Total Genus 51

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	51
sequence length	208
structure length	204
Chain Sequence	SLKPDNLPVTFGKNDVEIIARETLYRGFSSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGNEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEW

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__6006389920637001__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__6006389920637001__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/1VIQ/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__6006389920637001__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"6006389920637001","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/1VIQ/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__6006389920637001__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

publication title	Structural analysis of a set of proteins resulting from a bacterial genomics project pubmed doi rcsb
molecule keywords	ADP-ribose pyrophosphatase
molecule tags	Hydrolase
source organism	Escherichia coli
total genus	51
structure length	204
sequence length	208
chains with identical sequence	B, C
ec nomenclature	ec 3.6.1.13: ADP-ribose diphosphatase.
pdb deposition date	2003-12-01

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00293	NUDIX	NUDIX domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.90.79.10	Alpha Beta	Alpha-Beta Complex	Nucleoside Triphosphate Pyrophosphohydrolase	Nucleoside Triphosphate Pyrophosphohydrolase	1viqA00

2QJTA 4NFWA 1PPXA 2I6KA 1NQZA 2PNYA 3DKUA 4K6EA 1PPVA 3X0LA 2J8QA 5DEQA 1PVFA 3BHOA 3SMDA 3HHJA 2GB5A 3ACAA 3O69A 3Q91A 3X0KA 3RH7A 3GRNA 3MGMA 1V8NA 1PUQA 1SU2A 3GWYA 1V8WA 1MQWA 3I7VA 3N77A 3Q2SA 1V8YA 3GZ5A 2FKBA 3N9UA 5GHNA 3ZR1A 2A8RA 5ANTA 1VRLA 3MCFA 3FCMA 2FVVA 1QVJA 2YVPA 2DSCA 5BONA 1KT9A 5FSNA 3U53A 3ZR0A 3WHWA 2AZWA 1XSAA 2G74A 1MUTA 1HZTA 1X51A 3Q2TA 3E57A 4JZVA 4JZTA 5BS6A 2B0VA 5FSOA 2KDVA 3O6ZA 5ISYA 1PUNA 2B06A 1V8SA 2A8PA 3GG6A 4N1TA 5GHMA 4YOQA 1V8MA 3SHDA 3FK9A 3I7UA 1PPWA 5DD4A 5ANWA 3P5TA 2ICJA 1V8RA 2W4EA 5FSMA 2CL3A 3A6VA 4KG4A 3MDIA 4KTBA 4S2YA 3I9XA 3X0IA 2O1CA 2A8TA 2YYHA 3HYQA 2VNPA 3CNGA 3GZ8A 4C9WA 2QKMB 1Q54A 2O5FA 1V8LA 2A8QA 2QJOA 2RRKA 3Q1PA 5ANUA 1R67A 3L85A 3FSPA 4C9XA 1X83A 3X0RA 1KHZA 2R5WA 1G0SA 2YVNA 1KTGA 1G9QA 3ID9A 1VHGA 4ILQA 4ZG0A 1JKNA 4S2VA 5CFIA 4KYXA 2FMLA 1RYAA 4IJXA 3X0MA 3F13A 1Q33A 5GHPA 1IRYA 4MPOA 1NFSA 2ICKA 2VNQA 3A6UA 3BM4A 3O8SA 4NFXA 5ANSA 2Q9PA 2A6TA 3QSJA 3X0JA 5FSLA 1XSBA 3BAPA 3R03A 5C7TA 1VC9A 1MR2A 2YVOA 5FSIA 3COUA 4DYWA 5IW5A 3GZ6A 1RRSA 5C8LA 2DHOA 5ANVA 2JVBA 5IW4A 1MP2A 1Q27A 4JZUA 3X0PA 1V8IA 1VK6A 3X0NA 1V8VA 1VHZA 3G0QA 3A6TA 3O52A 3X0QA 3AC9A 4ICKA 5I8UA 2DSDA 3EEUA 1SOIA 3MDGA 3Q4IA 1K26A 4KG3A 5LPGA 1I9AA 1VIQA 3KVHA 2I8TA 1NQYA 1SJYA 1PUSA 2XSQA 4JZSA 2DUKA 3H95A 1XSCA 4S2XA 1F3YA 1VIUA 3F6AA 4HVYA 3O61A 3DUPA 1K2EA 2O5WA 5GHIA 3X0OA 1GA7A 5C7QA 1OW2A 1TUMA 3J7Ye 3P6YA 2PQVA 5HZXA 1NFZA 2GT4A 1HX3A 1VC8A 1X84A 2G73A 4S2WA 4N1UA 5CFJA 2DSBA 4YPHA 3EESA 3A6SA 1U20A 3Q93A 5GHJA 3X0SA 2A8SA 4HFQA 4V14A 3FFUA 1RRQA 1SZ3A 3SONA 5GHQA 5DPKA 1JRKA 1MK1A 3OGAA 5DDGA 4YPRA 5FSKA 3EXQA 1MQEA 2GT2A 2I8UA 2KDWA 2B2KA 3EF5A 1VCDA 3FJYA 2YVMA 1V8TA 1V8UA 5GHOA
chains in the Genus database with same CATH superfamily

2QJTA 4NFWA 1PPXA 2I6KA 1NQZA 2PNYA 3DKUA 4K6EA 1PPVA 3X0LA 2J8QA 5DEQA 1PVFA 3BHOA 3SMDA 3HHJA 2GB5A 3ACAA 3O69A 3Q91A 3X0KA 3RH7A 3GRNA 3MGMA 1V8NA 1PUQA 1SU2A 3GWYA 1V8WA 1MQWA 3I7VA 3N77A 3Q2SA 1V8YA 3GZ5A 2FKBA 3N9UA 5GHNA 3ZR1A 2A8RA 5ANTA 1VRLA 3MCFA 3FCMA 2FVVA 1QVJA 2YVPA 2DSCA 5BONA 1KT9A 5FSNA 3U53A 3ZR0A 3WHWA 2AZWA 1XSAA 2G74A 1MUTA 1HZTA 1X51A 3Q2TA 3E57A 4JZVA 4JZTA 5BS6A 2B0VA 5FSOA 2KDVA 3O6ZA 5ISYA 1PUNA 2B06A 1V8SA 2A8PA 3GG6A 4N1TA 5GHMA 4YOQA 1V8MA 3SHDA 3FK9A 3I7UA 1PPWA 5DD4A 5ANWA 3P5TA 2ICJA 1V8RA 2W4EA 5FSMA 2CL3A 3A6VA 4KG4A 3MDIA 4KTBA 4S2YA 3I9XA 3X0IA 2O1CA 2A8TA 2YYHA 3HYQA 2VNPA 3CNGA 3GZ8A 4C9WA 2QKMB 1Q54A 2O5FA 1V8LA 2A8QA 2QJOA 2RRKA 3Q1PA 5ANUA 1R67A 3L85A 3FSPA 4C9XA 1X83A 3X0RA 1KHZA 2R5WA 1G0SA 2YVNA 1KTGA 1G9QA 3ID9A 1VHGA 4ILQA 4ZG0A 1JKNA 4S2VA 5CFIA 4KYXA 2FMLA 1RYAA 4IJXA 3X0MA 3F13A 1Q33A 5GHPA 1IRYA 4MPOA 1NFSA 2ICKA 2VNQA 3A6UA 3BM4A 3O8SA 4NFXA 5ANSA 2Q9PA 2A6TA 3QSJA 3X0JA 5FSLA 1XSBA 3BAPA 3R03A 5C7TA 1VC9A 1MR2A 2YVOA 5FSIA 3COUA 4DYWA 5IW5A 3GZ6A 1RRSA 5C8LA 2DHOA 5ANVA 2JVBA 5IW4A 1MP2A 1Q27A 4JZUA 3X0PA 1V8IA 1VK6A 3X0NA 1V8VA 1VHZA 4J7HA 3G0QA 3A6TA 3O52A 3X0QA 3AC9A 4ICKA 5I8UA 2DSDA 3EEUA 1SOIA 3MDGA 3Q4IA 1K26A 4KG3A 5LPGA 1I9AA 1VIQA 3KVHA 2I8TA 1NQYA 1SJYA 1PUSA 2XSQA 4J7GA 2DUKA 3H95A 1XSCA 4JZSA 4S2XA 1F3YA 1VIUA 3F6AA 2CZRA 4HVYA 3O61A 3DUPA 1K2EA 2O5WA 5GHIA 3X0OA 1GA7A 5C7QA 1OW2A 1TUMA 3J7Ye 3P6YA 2PQVA 5HZXA 1NFZA 2GT4A 1HX3A 1VC8A 1X84A 2G73A 4S2WA 4N1UA 5CFJA 2DSBA 4YPHA 3EESA 3A6SA 1U20A 3Q93A 5GHJA 3X0SA 2A8SA 4HFQA 4V14A 3FFUA 1RRQA 1SZ3A 3SONA 5GHQA 5DPKA 1JRKA 1MK1A 3OGAA 5DDGA 4YPRA 5FSKA 3EXQA 1MQEA 2GT2A 2I8UA 2KDWA 2B2KA 3EF5A 1VCDA 3FJYA 2YVMA 1V8TA 1V8UA 5GHOA
chains in the Genus database with same CATH topology

2QJTA 4NFWA 1PPXA 2I6KA 1NQZA 2PNYA 3DKUA 4K6EA 1PPVA 3X0LA 2J8QA 5DEQA 1PVFA 3BHOA 3SMDA 3HHJA 2GB5A 3ACAA 3O69A 3Q91A 3X0KA 3RH7A 3GRNA 3MGMA 1V8NA 1PUQA 1SU2A 3GWYA 1V8WA 1MQWA 3I7VA 3N77A 3Q2SA 1V8YA 3GZ5A 2FKBA 3N9UA 5GHNA 3ZR1A 2A8RA 5ANTA 1VRLA 3MCFA 3FCMA 2FVVA 1QVJA 2YVPA 2DSCA 5BONA 1KT9A 5FSNA 3U53A 3ZR0A 3WHWA 2AZWA 1XSAA 2G74A 1MUTA 1HZTA 1X51A 3Q2TA 3E57A 4JZVA 4JZTA 5BS6A 2B0VA 5FSOA 2KDVA 3O6ZA 5ISYA 1PUNA 2B06A 1V8SA 2A8PA 3GG6A 4N1TA 5GHMA 4YOQA 1V8MA 3SHDA 3FK9A 3I7UA 1PPWA 5DD4A 5ANWA 3P5TA 2ICJA 1V8RA 2W4EA 5FSMA 2CL3A 3A6VA 4KG4A 3MDIA 4KTBA 4S2YA 3I9XA 3X0IA 2O1CA 2A8TA 2YYHA 3HYQA 2VNPA 3CNGA 3GZ8A 4C9WA 2QKMB 1Q54A 2O5FA 1V8LA 2A8QA 2QJOA 2RRKA 3Q1PA 5ANUA 1R67A 3L85A 3FSPA 4C9XA 1X83A 3X0RA 1KHZA 2R5WA 1G0SA 2YVNA 1KTGA 1G9QA 3ID9A 1VHGA 4ILQA 4ZG0A 1JKNA 4S2VA 5CFIA 4KYXA 2FMLA 1RYAA 4IJXA 3X0MA 3F13A 1Q33A 5GHPA 1IRYA 4MPOA 1NFSA 2ICKA 2VNQA 3A6UA 3BM4A 3O8SA 4NFXA 5ANSA 2Q9PA 2A6TA 3QSJA 3X0JA 5FSLA 1XSBA 3BAPA 3R03A 5C7TA 1VC9A 1MR2A 2YVOA 5FSIA 3COUA 4DYWA 5IW5A 3GZ6A 1RRSA 5C8LA 2DHOA 5ANVA 2JVBA 5IW4A 1MP2A 1Q27A 4JZUA 3X0PA 1V8IA 1VK6A 3X0NA 1V8VA 1VHZA 4J7HA 3G0QA 3A6TA 3O52A 3X0QA 3AC9A 4ICKA 5I8UA 2DSDA 3EEUA 1SOIA 3MDGA 3Q4IA 1K26A 4KG3A 5LPGA 1I9AA 1VIQA 3KVHA 2I8TA 1NQYA 1SJYA 1PUSA 2XSQA 4J7GA 2DUKA 3H95A 1XSCA 4JZSA 4S2XA 1F3YA 1VIUA 3F6AA 2CZRA 4HVYA 3O61A 3DUPA 1K2EA 2O5WA 5GHIA 3X0OA 1GA7A 5C7QA 1OW2A 1TUMA 3J7Ye 3P6YA 2PQVA 5HZXA 1NFZA 2GT4A 1HX3A 1VC8A 1X84A 2G73A 4S2WA 4N1UA 5CFJA 2DSBA 4YPHA 3EESA 3A6SA 1U20A 3Q93A 5GHJA 3X0SA 2A8SA 4HFQA 4V14A 3FFUA 1RRQA 1SZ3A 3SONA 5GHQA 5DPKA 1JRKA 1MK1A 3OGAA 5DDGA 4YPRA 5FSKA 3EXQA 1MQEA 2GT2A 2I8UA 2KDWA 2B2KA 3EF5A 1VCDA 3FJYA 2YVMA 1V8TA 1V8UA 5GHOA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2QJT A;  4NFW A;  1PPX A;  2I6K A;  1NQZ A;  2PNY A;  3DKU A;  4K6E A;  1PPV A;  3X0L A;  2J8Q A;  5DEQ A;  1PVF A;  3BHO A;  3SMD A;  3HHJ A;  2GB5 A;  3ACA A;  3O69 A;  3Q91 A;  3X0K A;  3RH7 A;  3GRN A;  3MGM A;  1V8N A;  1PUQ A;  1SU2 A;  3GWY A;  1V8W A;  1MQW A;  3I7V A;  3N77 A;  3Q2S A;  1V8Y A;  3GZ5 A;  2FKB A;  3N9U A;  5GHN A;  3ZR1 A;  2A8R A;  5ANT A;  1VRL A;  3MCF A;  3FCM A;  2FVV A;  1QVJ A;  2YVP A;  2DSC A;  5BON A;  1KT9 A;  5FSN A;  3U53 A;  3ZR0 A;  3WHW A;  2AZW A;  1XSA A;  2G74 A;  1MUT A;  1HZT A;  1X51 A;  3Q2T A;  3E57 A;  4JZV A;  4JZT A;  5BS6 A;  2B0V A;  5FSO A;  2KDV A;  3O6Z A;  5ISY A;  1PUN A;  2B06 A;  1V8S A;  2A8P A;  3GG6 A;  4N1T A;  5GHM A;  4YOQ A;  1V8M A;  3SHD A;  3FK9 A;  3I7U A;  1PPW A;  5DD4 A;  5ANW A;  3P5T A;  2ICJ A;  1V8R A;  2W4E A;  5FSM A;  2CL3 A;  3A6V A;  4KG4 A;  3MDI A;  4KTB A;  4S2Y A;  3I9X A;  3X0I A;  2O1C A;  2A8T A;  2YYH A;  3HYQ A;  2VNP A;  3CNG A;  3GZ8 A;  4C9W A;  2QKM B;  1Q54 A;  2O5F A;  1V8L A;  2A8Q A;  2QJO A;  2RRK A;  3Q1P A;  5ANU A;  1R67 A;  3L85 A;  3FSP A;  4C9X A;  1X83 A;  3X0R A;  1KHZ A;  2R5W A;  1G0S A;  2YVN A;  1KTG A;  1G9Q A;  3ID9 A;  1VHG A;  4ILQ A;  4ZG0 A;  1JKN A;  4S2V A;  5CFI A;  4KYX A;  2FML A;  1RYA A;  4IJX A;  3X0M A;  3F13 A;  1Q33 A;  5GHP A;  1IRY A;  4MPO A;  1NFS A;  2ICK A;  2VNQ A;  3A6U A;  3BM4 A;  3O8S A;  4NFX A;  5ANS A;  2Q9P A;  2A6T A;  3QSJ A;  3X0J A;  5FSL A;  1XSB A;  3BAP A;  3R03 A;  5C7T A;  1VC9 A;  1MR2 A;  2YVO A;  5FSI A;  3COU A;  4DYW A;  5IW5 A;  3GZ6 A;  1RRS A;  5C8L A;  2DHO A;  5ANV A;  2JVB A;  5IW4 A;  1MP2 A;  1Q27 A;  4JZU A;  3X0P A;  1V8I A;  1VK6 A;  3X0N A;  1V8V A;  1VHZ A;  3G0Q A;  3A6T A;  3O52 A;  3X0Q A;  3AC9 A;  4ICK A;  5I8U A;  2DSD A;  3EEU A;  1SOI A;  3MDG A;  3Q4I A;  1K26 A;  4KG3 A;  5LPG A;  1I9A A;  1VIQ A;  3KVH A;  2I8T A;  1NQY A;  1SJY A;  1PUS A;  2XSQ A;  4JZS A;  2DUK A;  3H95 A;  1XSC A;  4S2X A;  1F3Y A;  1VIU A;  3F6A A;  4HVY A;  3O61 A;  3DUP A;  1K2E A;  2O5W A;  5GHI A;  3X0O A;  1GA7 A;  5C7Q A;  1OW2 A;  1TUM A;  3J7Y e;  3P6Y A;  2PQV A;  5HZX A;  1NFZ A;  2GT4 A;  1HX3 A;  1VC8 A;  1X84 A;  2G73 A;  4S2W A;  4N1U A;  5CFJ A;  2DSB A;  4YPH A;  3EES A;  3A6S A;  1U20 A;  3Q93 A;  5GHJ A;  3X0S A;  2A8S A;  4HFQ A;  4V14 A;  3FFU A;  1RRQ A;  1SZ3 A;  3SON A;  5GHQ A;  5DPK A;  1JRK A;  1MK1 A;  3OGA A;  5DDG A;  4YPR A;  5FSK A;  3EXQ A;  1MQE A;  2GT2 A;  2I8U A;  2KDW A;  2B2K A;  3EF5 A;  1VCD A;  3FJY A;  2YVM A;  1V8T A;  1V8U A;  5GHO A; 
#chains in the Genus database with same CATH topology
 2QJT A;  4NFW A;  1PPX A;  2I6K A;  1NQZ A;  2PNY A;  3DKU A;  4K6E A;  1PPV A;  3X0L A;  2J8Q A;  5DEQ A;  1PVF A;  3BHO A;  3SMD A;  3HHJ A;  2GB5 A;  3ACA A;  3O69 A;  3Q91 A;  3X0K A;  3RH7 A;  3GRN A;  3MGM A;  1V8N A;  1PUQ A;  1SU2 A;  3GWY A;  1V8W A;  1MQW A;  3I7V A;  3N77 A;  3Q2S A;  1V8Y A;  3GZ5 A;  2FKB A;  3N9U A;  5GHN A;  3ZR1 A;  2A8R A;  5ANT A;  1VRL A;  3MCF A;  3FCM A;  2FVV A;  1QVJ A;  2YVP A;  2DSC A;  5BON A;  1KT9 A;  5FSN A;  3U53 A;  3ZR0 A;  3WHW A;  2AZW A;  1XSA A;  2G74 A;  1MUT A;  1HZT A;  1X51 A;  3Q2T A;  3E57 A;  4JZV A;  4JZT A;  5BS6 A;  2B0V A;  5FSO A;  2KDV A;  3O6Z A;  5ISY A;  1PUN A;  2B06 A;  1V8S A;  2A8P A;  3GG6 A;  4N1T A;  5GHM A;  4YOQ A;  1V8M A;  3SHD A;  3FK9 A;  3I7U A;  1PPW A;  5DD4 A;  5ANW A;  3P5T A;  2ICJ A;  1V8R A;  2W4E A;  5FSM A;  2CL3 A;  3A6V A;  4KG4 A;  3MDI A;  4KTB A;  4S2Y A;  3I9X A;  3X0I A;  2O1C A;  2A8T A;  2YYH A;  3HYQ A;  2VNP A;  3CNG A;  3GZ8 A;  4C9W A;  2QKM B;  1Q54 A;  2O5F A;  1V8L A;  2A8Q A;  2QJO A;  2RRK A;  3Q1P A;  5ANU A;  1R67 A;  3L85 A;  3FSP A;  4C9X A;  1X83 A;  3X0R A;  1KHZ A;  2R5W A;  1G0S A;  2YVN A;  1KTG A;  1G9Q A;  3ID9 A;  1VHG A;  4ILQ A;  4ZG0 A;  1JKN A;  4S2V A;  5CFI A;  4KYX A;  2FML A;  1RYA A;  4IJX A;  3X0M A;  3F13 A;  1Q33 A;  5GHP A;  1IRY A;  4MPO A;  1NFS A;  2ICK A;  2VNQ A;  3A6U A;  3BM4 A;  3O8S A;  4NFX A;  5ANS A;  2Q9P A;  2A6T A;  3QSJ A;  3X0J A;  5FSL A;  1XSB A;  3BAP A;  3R03 A;  5C7T A;  1VC9 A;  1MR2 A;  2YVO A;  5FSI A;  3COU A;  4DYW A;  5IW5 A;  3GZ6 A;  1RRS A;  5C8L A;  2DHO A;  5ANV A;  2JVB A;  5IW4 A;  1MP2 A;  1Q27 A;  4JZU A;  3X0P A;  1V8I A;  1VK6 A;  3X0N A;  1V8V A;  1VHZ A;  4J7H A;  3G0Q A;  3A6T A;  3O52 A;  3X0Q A;  3AC9 A;  4ICK A;  5I8U A;  2DSD A;  3EEU A;  1SOI A;  3MDG A;  3Q4I A;  1K26 A;  4KG3 A;  5LPG A;  1I9A A;  1VIQ A;  3KVH A;  2I8T A;  1NQY A;  1SJY A;  1PUS A;  2XSQ A;  4J7G A;  2DUK A;  3H95 A;  1XSC A;  4JZS A;  4S2X A;  1F3Y A;  1VIU A;  3F6A A;  2CZR A;  4HVY A;  3O61 A;  3DUP A;  1K2E A;  2O5W A;  5GHI A;  3X0O A;  1GA7 A;  5C7Q A;  1OW2 A;  1TUM A;  3J7Y e;  3P6Y A;  2PQV A;  5HZX A;  1NFZ A;  2GT4 A;  1HX3 A;  1VC8 A;  1X84 A;  2G73 A;  4S2W A;  4N1U A;  5CFJ A;  2DSB A;  4YPH A;  3EES A;  3A6S A;  1U20 A;  3Q93 A;  5GHJ A;  3X0S A;  2A8S A;  4HFQ A;  4V14 A;  3FFU A;  1RRQ A;  1SZ3 A;  3SON A;  5GHQ A;  5DPK A;  1JRK A;  1MK1 A;  3OGA A;  5DDG A;  4YPR A;  5FSK A;  3EXQ A;  1MQE A;  2GT2 A;  2I8U A;  2KDW A;  2B2K A;  3EF5 A;  1VCD A;  3FJY A;  2YVM A;  1V8T A;  1V8U A;  5GHO A; 
#chains in the Genus database with same CATH homology
 2QJT A;  4NFW A;  1PPX A;  2I6K A;  1NQZ A;  2PNY A;  3DKU A;  4K6E A;  1PPV A;  3X0L A;  2J8Q A;  5DEQ A;  1PVF A;  3BHO A;  3SMD A;  3HHJ A;  2GB5 A;  3ACA A;  3O69 A;  3Q91 A;  3X0K A;  3RH7 A;  3GRN A;  3MGM A;  1V8N A;  1PUQ A;  1SU2 A;  3GWY A;  1V8W A;  1MQW A;  3I7V A;  3N77 A;  3Q2S A;  1V8Y A;  3GZ5 A;  2FKB A;  3N9U A;  5GHN A;  3ZR1 A;  2A8R A;  5ANT A;  1VRL A;  3MCF A;  3FCM A;  2FVV A;  1QVJ A;  2YVP A;  2DSC A;  5BON A;  1KT9 A;  5FSN A;  3U53 A;  3ZR0 A;  3WHW A;  2AZW A;  1XSA A;  2G74 A;  1MUT A;  1HZT A;  1X51 A;  3Q2T A;  3E57 A;  4JZV A;  4JZT A;  5BS6 A;  2B0V A;  5FSO A;  2KDV A;  3O6Z A;  5ISY A;  1PUN A;  2B06 A;  1V8S A;  2A8P A;  3GG6 A;  4N1T A;  5GHM A;  4YOQ A;  1V8M A;  3SHD A;  3FK9 A;  3I7U A;  1PPW A;  5DD4 A;  5ANW A;  3P5T A;  2ICJ A;  1V8R A;  2W4E A;  5FSM A;  2CL3 A;  3A6V A;  4KG4 A;  3MDI A;  4KTB A;  4S2Y A;  3I9X A;  3X0I A;  2O1C A;  2A8T A;  2YYH A;  3HYQ A;  2VNP A;  3CNG A;  3GZ8 A;  4C9W A;  2QKM B;  1Q54 A;  2O5F A;  1V8L A;  2A8Q A;  2QJO A;  2RRK A;  3Q1P A;  5ANU A;  1R67 A;  3L85 A;  3FSP A;  4C9X A;  1X83 A;  3X0R A;  1KHZ A;  2R5W A;  1G0S A;  2YVN A;  1KTG A;  1G9Q A;  3ID9 A;  1VHG A;  4ILQ A;  4ZG0 A;  1JKN A;  4S2V A;  5CFI A;  4KYX A;  2FML A;  1RYA A;  4IJX A;  3X0M A;  3F13 A;  1Q33 A;  5GHP A;  1IRY A;  4MPO A;  1NFS A;  2ICK A;  2VNQ A;  3A6U A;  3BM4 A;  3O8S A;  4NFX A;  5ANS A;  2Q9P A;  2A6T A;  3QSJ A;  3X0J A;  5FSL A;  1XSB A;  3BAP A;  3R03 A;  5C7T A;  1VC9 A;  1MR2 A;  2YVO A;  5FSI A;  3COU A;  4DYW A;  5IW5 A;  3GZ6 A;  1RRS A;  5C8L A;  2DHO A;  5ANV A;  2JVB A;  5IW4 A;  1MP2 A;  1Q27 A;  4JZU A;  3X0P A;  1V8I A;  1VK6 A;  3X0N A;  1V8V A;  1VHZ A;  4J7H A;  3G0Q A;  3A6T A;  3O52 A;  3X0Q A;  3AC9 A;  4ICK A;  5I8U A;  2DSD A;  3EEU A;  1SOI A;  3MDG A;  3Q4I A;  1K26 A;  4KG3 A;  5LPG A;  1I9A A;  1VIQ A;  3KVH A;  2I8T A;  1NQY A;  1SJY A;  1PUS A;  2XSQ A;  4J7G A;  2DUK A;  3H95 A;  1XSC A;  4JZS A;  4S2X A;  1F3Y A;  1VIU A;  3F6A A;  2CZR A;  4HVY A;  3O61 A;  3DUP A;  1K2E A;  2O5W A;  5GHI A;  3X0O A;  1GA7 A;  5C7Q A;  1OW2 A;  1TUM A;  3J7Y e;  3P6Y A;  2PQV A;  5HZX A;  1NFZ A;  2GT4 A;  1HX3 A;  1VC8 A;  1X84 A;  2G73 A;  4S2W A;  4N1U A;  5CFJ A;  2DSB A;  4YPH A;  3EES A;  3A6S A;  1U20 A;  3Q93 A;  5GHJ A;  3X0S A;  2A8S A;  4HFQ A;  4V14 A;  3FFU A;  1RRQ A;  1SZ3 A;  3SON A;  5GHQ A;  5DPK A;  1JRK A;  1MK1 A;  3OGA A;  5DDG A;  4YPR A;  5FSK A;  3EXQ A;  1MQE A;  2GT2 A;  2I8U A;  2KDW A;  2B2K A;  3EF5 A;  1VCD A;  3FJY A;  2YVM A;  1V8T A;  1V8U A;  5GHO A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

1VIQA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations