3ETIA

Structure of a cubic crystal form of x (adrp) domain from fcov
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
168
structure length
168
Chain Sequence
DLILPFYKAGKVSFYQGDLDVLINFLEPDVLVNAANGDLRHVGGVARAIDVFTGGKLTKRSKEYLKSSKAIAPGNAVLFENVLEHLSVMNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRDLNVFVYTDQERVTIENFFNG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of the X (ADRP) domain of nsp3 from feline coronavirus
pubmed doi rcsb
molecule keywords macro domain of Non-structural protein 3
source organism Feline infectious peritonitis virus
molecule tags Rna binding protein
total genus 52
structure length 168
sequence length 168
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 2.7.7.48: RNA-directed RNA polymerase.
pdb deposition date 2008-10-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3etiA00
1ZR3A 4GVVA 4ABLA 4R6TA 2XD7A 1TY8A 5FSVA 3GPOA 2DX6A 3EJGA 3EWPA 3KZWA 4ZX9A 4ZX8A 1ZR5A 5AILA 4ABKA 1VHUA 4ZYQA 4D86A 4J5SA 5FSYA 5CBMA 5CMSA 1HJZA 3H8EA 3GPQA 1SPVA 3GPGA 5DUSA 1TXZA 3IIDA 3V2BA 4R76A 3V45A 4ETKA 2FAVA 1GYTA 4ZI6A 2EWBA 4GUAA 4K0CA 4J5QA 4ZY2A 3EWRA 3JRUA 3JZTA 3EKEA 5E3BA 3ETIA 2LGRA 4JVVA 2FXKA 4KSIA 4J4ZA 1LAMA 1BPNA 2L8RA 5HIHA 3SIJA 4K3NA 2J9AA 1LAPA 4ZY1A 3KQXA 4TU0A 5HOLA 3KR4A 2FG1A 4JCAA 4KYBA 2BFQA 3IJ3A 1BLLE 1BPMA 4ESSA 2BFRA 3EW5A 4JGKA 4R7MA 4JLLA 1YD9A 5CB5A 3KR5A 1NJRA 1LANA 5FSZA 2VRIA 3GQEA 3EWOA 3SIHA 4IQYA 5D8NA 2ACFA 2EEEA 4GVWA 1LCPA 3H8GA 3KQZA 3SIIA 3PEIA 3Q71A 4X2TA 3H8FA 3EWQA 3IIFA 2X47A 3EJFA 4ZY0A 2AFCA 5FSXA 3SIGA 3GQOA 4UMLA 3T8WA 5FSUA 4ETJA 3Q6ZA 3VFQA 5CB3A 4J5RA
chains in the Genus database with same CATH superfamily
1ZR3A 4GVVA 4ABLA 4R6TA 2XD7A 1TY8A 5FSVA 3GPOA 2DX6A 3EJGA 3EWPA 3KZWA 4ZX9A 4ZX8A 1ZR5A 5AILA 4ABKA 1VHUA 4ZYQA 4D86A 4J5SA 5FSYA 5CBMA 2RNKA 5CMSA 1HJZA 3H8EA 3GPQA 1SPVA 3GPGA 5DUSA 1TXZA 3IIDA 3V2BA 4R76A 3V45A 4ETKA 2FAVA 1GYTA 4ZI6A 2JZDA 2EWBA 4GUAA 4K0CA 4J5QA 4ZY2A 3EWRA 3JRUA 3JZTA 3EKEA 5E3BA 3ETIA 2LGRA 4JVVA 2KQVA 2FXKA 2WCTA 4KSIA 2JZEA 4J4ZA 1LAMA 1BPNA 2L8RA 5HIHA 3SIJA 2J9AA 1LAPA 4K3NA 4ZY1A 3KQXA 4TU0A 5HOLA 3KR4A 2FG1A 4JCAA 4KYBA 2BFQA 3IJ3A 1BLLE 1BPMA 4ESSA 2BFRA 3EW5A 4JGKA 4R7MA 4JLLA 1YD9A 5CB5A 3KR5A 1NJRA 1LANA 5FSZA 2VRIA 3GQEA 3EWOA 3SIHA 4IQYA 5D8NA 2ACFA 2EEEA 2JZFA 4GVWA 1LCPA 3H8GA 3KQZA 3SIIA 3PEIA 3Q71A 4X2TA 3H8FA 3EWQA 3IIFA 2X47A 3EJFA 4ZY0A 2AFCA 5FSXA 2W2GA 3SIGA 3GQOA 4UMLA 3T8WA 5FSUA 4ETJA 3Q6ZA 3VFQA 5CB3A 4J5RA
chains in the Genus database with same CATH topology
1ZR3A 4GVVA 4ABLA 4R6TA 2XD7A 1TY8A 5FSVA 3GPOA 2DX6A 3EJGA 3EWPA 3KZWA 4ZX9A 4ZX8A 1ZR5A 5AILA 4ABKA 1VHUA 4ZYQA 4D86A 4J5SA 5FSYA 5CBMA 5CMSA 1HJZA 3H8EA 3GPQA 1SPVA 3GPGA 5DUSA 1TXZA 3IIDA 3V2BA 4R76A 3V45A 4ETKA 2FAVA 1GYTA 4ZI6A 2EWBA 4GUAA 4K0CA 4J5QA 4ZY2A 3EWRA 3JRUA 3JZTA 3EKEA 5E3BA 3ETIA 2LGRA 4JVVA 2FXKA 4KSIA 4J4ZA 1LAMA 1BPNA 2L8RA 5HIHA 3SIJA 4K3NA 2J9AA 1LAPA 4ZY1A 3KQXA 4TU0A 5HOLA 3KR4A 2FG1A 4JCAA 4KYBA 2BFQA 3IJ3A 1BLLE 1BPMA 4ESSA 2BFRA 3EW5A 4JGKA 4R7MA 4JLLA 1YD9A 5CB5A 3KR5A 1NJRA 1LANA 5FSZA 2VRIA 3GQEA 3EWOA 3SIHA 4IQYA 5D8NA 2ACFA 2EEEA 4GVWA 1LCPA 3H8GA 3KQZA 3SIIA 3PEIA 3Q71A 4X2TA 3H8FA 3EWQA 3IIFA 2X47A 3EJFA 4ZY0A 2AFCA 5FSXA 3SIGA 3GQOA 4UMLA 3T8WA 5FSUA 4ETJA 3Q6ZA 3VFQA 5CB3A 4J5RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZR3 A;  4GVV A;  4ABL A;  4R6T A;  2XD7 A;  1TY8 A;  5FSV A;  3GPO A;  2DX6 A;  3EJG A;  3EWP A;  3KZW A;  4ZX9 A;  4ZX8 A;  1ZR5 A;  5AIL A;  4ABK A;  1VHU A;  4ZYQ A;  4D86 A;  4J5S A;  5FSY A;  5CBM A;  5CMS A;  1HJZ A;  3H8E A;  3GPQ A;  1SPV A;  3GPG A;  5DUS A;  1TXZ A;  3IID A;  3V2B A;  4R76 A;  3V45 A;  4ETK A;  2FAV A;  1GYT A;  4ZI6 A;  2EWB A;  4GUA A;  4K0C A;  4J5Q A;  4ZY2 A;  3EWR A;  3JRU A;  3JZT A;  3EKE A;  5E3B A;  3ETI A;  2LGR A;  4JVV A;  2FXK A;  4KSI A;  4J4Z A;  1LAM A;  1BPN A;  2L8R A;  5HIH A;  3SIJ A;  4K3N A;  2J9A A;  1LAP A;  4ZY1 A;  3KQX A;  4TU0 A;  5HOL A;  3KR4 A;  2FG1 A;  4JCA A;  4KYB A;  2BFQ A;  3IJ3 A;  1BLL E;  1BPM A;  4ESS A;  2BFR A;  3EW5 A;  4JGK A;  4R7M A;  4JLL A;  1YD9 A;  5CB5 A;  3KR5 A;  1NJR A;  1LAN A;  5FSZ A;  2VRI A;  3GQE A;  3EWO A;  3SIH A;  4IQY A;  5D8N A;  2ACF A;  2EEE A;  4GVW A;  1LCP A;  3H8G A;  3KQZ A;  3SII A;  3PEI A;  3Q71 A;  4X2T A;  3H8F A;  3EWQ A;  3IIF A;  2X47 A;  3EJF A;  4ZY0 A;  2AFC A;  5FSX A;  3SIG A;  3GQO A;  4UML A;  3T8W A;  5FSU A;  4ETJ A;  3Q6Z A;  3VFQ A;  5CB3 A;  4J5R A; 
#chains in the Genus database with same CATH topology
 1ZR3 A;  4GVV A;  4ABL A;  4R6T A;  2XD7 A;  1TY8 A;  5FSV A;  3GPO A;  2DX6 A;  3EJG A;  3EWP A;  3KZW A;  4ZX9 A;  4ZX8 A;  1ZR5 A;  5AIL A;  4ABK A;  1VHU A;  4ZYQ A;  4D86 A;  4J5S A;  5FSY A;  5CBM A;  2RNK A;  5CMS A;  1HJZ A;  3H8E A;  3GPQ A;  1SPV A;  3GPG A;  5DUS A;  1TXZ A;  3IID A;  3V2B A;  4R76 A;  3V45 A;  4ETK A;  2FAV A;  1GYT A;  4ZI6 A;  2JZD A;  2EWB A;  4GUA A;  4K0C A;  4J5Q A;  4ZY2 A;  3EWR A;  3JRU A;  3JZT A;  3EKE A;  5E3B A;  3ETI A;  2LGR A;  4JVV A;  2KQV A;  2FXK A;  2WCT A;  4KSI A;  2JZE A;  4J4Z A;  1LAM A;  1BPN A;  2L8R A;  5HIH A;  3SIJ A;  2J9A A;  1LAP A;  4K3N A;  4ZY1 A;  3KQX A;  4TU0 A;  5HOL A;  3KR4 A;  2FG1 A;  4JCA A;  4KYB A;  2BFQ A;  3IJ3 A;  1BLL E;  1BPM A;  4ESS A;  2BFR A;  3EW5 A;  4JGK A;  4R7M A;  4JLL A;  1YD9 A;  5CB5 A;  3KR5 A;  1NJR A;  1LAN A;  5FSZ A;  2VRI A;  3GQE A;  3EWO A;  3SIH A;  4IQY A;  5D8N A;  2ACF A;  2EEE A;  2JZF A;  4GVW A;  1LCP A;  3H8G A;  3KQZ A;  3SII A;  3PEI A;  3Q71 A;  4X2T A;  3H8F A;  3EWQ A;  3IIF A;  2X47 A;  3EJF A;  4ZY0 A;  2AFC A;  5FSX A;  2W2G A;  3SIG A;  3GQO A;  4UML A;  3T8W A;  5FSU A;  4ETJ A;  3Q6Z A;  3VFQ A;  5CB3 A;  4J5R A; 
#chains in the Genus database with same CATH homology
 1ZR3 A;  4GVV A;  4ABL A;  4R6T A;  2XD7 A;  1TY8 A;  5FSV A;  3GPO A;  2DX6 A;  3EJG A;  3EWP A;  3KZW A;  4ZX9 A;  4ZX8 A;  1ZR5 A;  5AIL A;  4ABK A;  1VHU A;  4ZYQ A;  4D86 A;  4J5S A;  5FSY A;  5CBM A;  5CMS A;  1HJZ A;  3H8E A;  3GPQ A;  1SPV A;  3GPG A;  5DUS A;  1TXZ A;  3IID A;  3V2B A;  4R76 A;  3V45 A;  4ETK A;  2FAV A;  1GYT A;  4ZI6 A;  2EWB A;  4GUA A;  4K0C A;  4J5Q A;  4ZY2 A;  3EWR A;  3JRU A;  3JZT A;  3EKE A;  5E3B A;  3ETI A;  2LGR A;  4JVV A;  2FXK A;  4KSI A;  4J4Z A;  1LAM A;  1BPN A;  2L8R A;  5HIH A;  3SIJ A;  4K3N A;  2J9A A;  1LAP A;  4ZY1 A;  3KQX A;  4TU0 A;  5HOL A;  3KR4 A;  2FG1 A;  4JCA A;  4KYB A;  2BFQ A;  3IJ3 A;  1BLL E;  1BPM A;  4ESS A;  2BFR A;  3EW5 A;  4JGK A;  4R7M A;  4JLL A;  1YD9 A;  5CB5 A;  3KR5 A;  1NJR A;  1LAN A;  5FSZ A;  2VRI A;  3GQE A;  3EWO A;  3SIH A;  4IQY A;  5D8N A;  2ACF A;  2EEE A;  4GVW A;  1LCP A;  3H8G A;  3KQZ A;  3SII A;  3PEI A;  3Q71 A;  4X2T A;  3H8F A;  3EWQ A;  3IIF A;  2X47 A;  3EJF A;  4ZY0 A;  2AFC A;  5FSX A;  3SIG A;  3GQO A;  4UML A;  3T8W A;  5FSU A;  4ETJ A;  3Q6Z A;  3VFQ A;  5CB3 A;  4J5R A; 
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similar chains in the Genus database (?% sequence similarity)
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