3V2BA

Human poly(adp-ribose) polymerase 15 (artd7, bal3), macro domain 2 in complex with adenosine-5-diphosphoribose
Total Genus 58
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
58
sequence length
176
structure length
176
Chain Sequence
YFQSMTAYEMKIGAITFQVATGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKCKIIIHVPGGKDVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Poly [ADP-ribose] polymerase 15
publication title Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transferase
total genus 58
structure length 176
sequence length 176
ec nomenclature ec 2.4.2.30: NAD(+) ADP-ribosyltransferase.
pdb deposition date 2011-12-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3v2bA00
3H8GA 3SIIA 3KZWA 4JCAA 3V45A 4J5RA 4R76A 4GVVA 3EWRA 5FSZA 1GYTA 2AFCA 1LCPA 3EJFA 3GQOA 3GPOA 5FSYA 5DUSA 3IIFA 4R6TA 2VRIA 3JRUA 4JVVA 4GUAA 5HIHA 5FSVA 4ABLA 4KSIA 4K0CA 3EWQA 4ZI6A 2EEEA 5CMSA 1LANA 3T8WA 3H8FA 4R7MA 4J4ZA 1BPMA 4ABKA 4J5QA 2L8RA 5E3BA 4ZX9A 4ZY2A 3VFQA 1ZR3A 3EKEA 5FSXA 2ACFA 5CB3A 4GVWA 5CBMA 2X47A 1YD9A 5CB5A 2BFRA 1ZR5A 3EW5A 3Q71A 2EWBA 1TXZA 4D86A 5HOLA 2FAVA 5AILA 3GPGA 3IIDA 1LAPA 4KYBA 2DX6A 3IJ3A 5D8NA 3KQXA 2J9AA 1LAMA 3ETIA 1HJZA 3EWPA 1SPVA 1VHUA 4UMLA 5FSUA 3Q6ZA 4ESSA 3SIGA 3JZTA 3PEIA 4ETJA 4ZYQA 4K3NA 2LGRA 4TU0A 1BLLE 4JLLA 3KQZA 4ETKA 4ZY1A 4IQYA 2FG1A 3EWOA 1NJRA 4X2TA 2BFQA 3SIHA 1BPNA 2FXKA 3SIJA 3KR4A 4JGKA 2XD7A 4ZY0A 3H8EA 3KR5A 3EJGA 3GPQA 4ZX8A 1TY8A 4J5SA 3V2BA 3GQEA
chains in the Genus database with same CATH superfamily
3H8GA 3SIIA 3KZWA 4JCAA 3V45A 4J5RA 4R76A 4GVVA 3EWRA 5FSZA 1GYTA 2JZEA 2AFCA 1LCPA 3EJFA 3GQOA 3GPOA 5FSYA 5DUSA 3IIFA 4R6TA 2VRIA 3JRUA 4JVVA 2WCTA 4GUAA 5HIHA 5FSVA 4ABLA 4KSIA 4K0CA 3EWQA 4ZI6A 2EEEA 5CMSA 1LANA 3T8WA 3H8FA 4R7MA 4J4ZA 1BPMA 4ABKA 4J5QA 2L8RA 5E3BA 2JZDA 4ZX9A 4ZY2A 3VFQA 1ZR3A 3EKEA 5FSXA 2ACFA 5CB3A 4GVWA 5CBMA 2X47A 1YD9A 5CB5A 2BFRA 1ZR5A 3EW5A 3Q71A 2EWBA 1TXZA 4D86A 5HOLA 2FAVA 5AILA 3GPGA 3IIDA 1LAPA 2JZFA 4KYBA 2DX6A 3IJ3A 5D8NA 3KQXA 2J9AA 1LAMA 3ETIA 1HJZA 3EWPA 1SPVA 1VHUA 4UMLA 5FSUA 3Q6ZA 4ESSA 3SIGA 3JZTA 3PEIA 4ETJA 4ZYQA 4K3NA 2LGRA 4TU0A 1BLLE 4JLLA 3KQZA 4ETKA 4ZY1A 4IQYA 2FG1A 3EWOA 1NJRA 4X2TA 2BFQA 3SIHA 1BPNA 2W2GA 2FXKA 2KQVA 3SIJA 3KR4A 4JGKA 2XD7A 4ZY0A 3H8EA 3KR5A 3EJGA 3GPQA 4ZX8A 2RNKA 1TY8A 4J5SA 3V2BA 3GQEA
chains in the Genus database with same CATH topology
3H8GA 3SIIA 3KZWA 4JCAA 3V45A 4J5RA 4R76A 4GVVA 3EWRA 5FSZA 1GYTA 2AFCA 1LCPA 3EJFA 3GQOA 3GPOA 5FSYA 5DUSA 3IIFA 4R6TA 2VRIA 3JRUA 4JVVA 4GUAA 5HIHA 5FSVA 4ABLA 4KSIA 4K0CA 3EWQA 4ZI6A 2EEEA 5CMSA 1LANA 3T8WA 3H8FA 4R7MA 4J4ZA 1BPMA 4ABKA 4J5QA 2L8RA 5E3BA 4ZX9A 4ZY2A 3VFQA 1ZR3A 3EKEA 5FSXA 2ACFA 5CB3A 4GVWA 5CBMA 2X47A 1YD9A 5CB5A 2BFRA 1ZR5A 3EW5A 3Q71A 2EWBA 1TXZA 4D86A 5HOLA 2FAVA 5AILA 3GPGA 3IIDA 1LAPA 4KYBA 2DX6A 3IJ3A 5D8NA 3KQXA 2J9AA 1LAMA 3ETIA 1HJZA 3EWPA 1SPVA 1VHUA 4UMLA 5FSUA 3Q6ZA 4ESSA 3SIGA 3JZTA 3PEIA 4ETJA 4ZYQA 4K3NA 2LGRA 4TU0A 1BLLE 4JLLA 3KQZA 4ETKA 4ZY1A 4IQYA 2FG1A 3EWOA 1NJRA 4X2TA 2BFQA 3SIHA 1BPNA 2FXKA 3SIJA 3KR4A 4JGKA 2XD7A 4ZY0A 3H8EA 3KR5A 3EJGA 3GPQA 4ZX8A 1TY8A 4J5SA 3V2BA 3GQEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3H8G A;  3SII A;  3KZW A;  4JCA A;  3V45 A;  4J5R A;  4R76 A;  4GVV A;  3EWR A;  5FSZ A;  1GYT A;  2AFC A;  1LCP A;  3EJF A;  3GQO A;  3GPO A;  5FSY A;  5DUS A;  3IIF A;  4R6T A;  2VRI A;  3JRU A;  4JVV A;  4GUA A;  5HIH A;  5FSV A;  4ABL A;  4KSI A;  4K0C A;  3EWQ A;  4ZI6 A;  2EEE A;  5CMS A;  1LAN A;  3T8W A;  3H8F A;  4R7M A;  4J4Z A;  1BPM A;  4ABK A;  4J5Q A;  2L8R A;  5E3B A;  4ZX9 A;  4ZY2 A;  3VFQ A;  1ZR3 A;  3EKE A;  5FSX A;  2ACF A;  5CB3 A;  4GVW A;  5CBM A;  2X47 A;  1YD9 A;  5CB5 A;  2BFR A;  1ZR5 A;  3EW5 A;  3Q71 A;  2EWB A;  1TXZ A;  4D86 A;  5HOL A;  2FAV A;  5AIL A;  3GPG A;  3IID A;  1LAP A;  4KYB A;  2DX6 A;  3IJ3 A;  5D8N A;  3KQX A;  2J9A A;  1LAM A;  3ETI A;  1HJZ A;  3EWP A;  1SPV A;  1VHU A;  4UML A;  5FSU A;  3Q6Z A;  4ESS A;  3SIG A;  3JZT A;  3PEI A;  4ETJ A;  4ZYQ A;  4K3N A;  2LGR A;  4TU0 A;  1BLL E;  4JLL A;  3KQZ A;  4ETK A;  4ZY1 A;  4IQY A;  2FG1 A;  3EWO A;  1NJR A;  4X2T A;  2BFQ A;  3SIH A;  1BPN A;  2FXK A;  3SIJ A;  3KR4 A;  4JGK A;  2XD7 A;  4ZY0 A;  3H8E A;  3KR5 A;  3EJG A;  3GPQ A;  4ZX8 A;  1TY8 A;  4J5S A;  3V2B A;  3GQE A; 
#chains in the Genus database with same CATH topology
 3H8G A;  3SII A;  3KZW A;  4JCA A;  3V45 A;  4J5R A;  4R76 A;  4GVV A;  3EWR A;  5FSZ A;  1GYT A;  2JZE A;  2AFC A;  1LCP A;  3EJF A;  3GQO A;  3GPO A;  5FSY A;  5DUS A;  3IIF A;  4R6T A;  2VRI A;  3JRU A;  4JVV A;  2WCT A;  4GUA A;  5HIH A;  5FSV A;  4ABL A;  4KSI A;  4K0C A;  3EWQ A;  4ZI6 A;  2EEE A;  5CMS A;  1LAN A;  3T8W A;  3H8F A;  4R7M A;  4J4Z A;  1BPM A;  4ABK A;  4J5Q A;  2L8R A;  5E3B A;  2JZD A;  4ZX9 A;  4ZY2 A;  3VFQ A;  1ZR3 A;  3EKE A;  5FSX A;  2ACF A;  5CB3 A;  4GVW A;  5CBM A;  2X47 A;  1YD9 A;  5CB5 A;  2BFR A;  1ZR5 A;  3EW5 A;  3Q71 A;  2EWB A;  1TXZ A;  4D86 A;  5HOL A;  2FAV A;  5AIL A;  3GPG A;  3IID A;  1LAP A;  2JZF A;  4KYB A;  2DX6 A;  3IJ3 A;  5D8N A;  3KQX A;  2J9A A;  1LAM A;  3ETI A;  1HJZ A;  3EWP A;  1SPV A;  1VHU A;  4UML A;  5FSU A;  3Q6Z A;  4ESS A;  3SIG A;  3JZT A;  3PEI A;  4ETJ A;  4ZYQ A;  4K3N A;  2LGR A;  4TU0 A;  1BLL E;  4JLL A;  3KQZ A;  4ETK A;  4ZY1 A;  4IQY A;  2FG1 A;  3EWO A;  1NJR A;  4X2T A;  2BFQ A;  3SIH A;  1BPN A;  2W2G A;  2FXK A;  2KQV A;  3SIJ A;  3KR4 A;  4JGK A;  2XD7 A;  4ZY0 A;  3H8E A;  3KR5 A;  3EJG A;  3GPQ A;  4ZX8 A;  2RNK A;  1TY8 A;  4J5S A;  3V2B A;  3GQE A; 
#chains in the Genus database with same CATH homology
 3H8G A;  3SII A;  3KZW A;  4JCA A;  3V45 A;  4J5R A;  4R76 A;  4GVV A;  3EWR A;  5FSZ A;  1GYT A;  2AFC A;  1LCP A;  3EJF A;  3GQO A;  3GPO A;  5FSY A;  5DUS A;  3IIF A;  4R6T A;  2VRI A;  3JRU A;  4JVV A;  4GUA A;  5HIH A;  5FSV A;  4ABL A;  4KSI A;  4K0C A;  3EWQ A;  4ZI6 A;  2EEE A;  5CMS A;  1LAN A;  3T8W A;  3H8F A;  4R7M A;  4J4Z A;  1BPM A;  4ABK A;  4J5Q A;  2L8R A;  5E3B A;  4ZX9 A;  4ZY2 A;  3VFQ A;  1ZR3 A;  3EKE A;  5FSX A;  2ACF A;  5CB3 A;  4GVW A;  5CBM A;  2X47 A;  1YD9 A;  5CB5 A;  2BFR A;  1ZR5 A;  3EW5 A;  3Q71 A;  2EWB A;  1TXZ A;  4D86 A;  5HOL A;  2FAV A;  5AIL A;  3GPG A;  3IID A;  1LAP A;  4KYB A;  2DX6 A;  3IJ3 A;  5D8N A;  3KQX A;  2J9A A;  1LAM A;  3ETI A;  1HJZ A;  3EWP A;  1SPV A;  1VHU A;  4UML A;  5FSU A;  3Q6Z A;  4ESS A;  3SIG A;  3JZT A;  3PEI A;  4ETJ A;  4ZYQ A;  4K3N A;  2LGR A;  4TU0 A;  1BLL E;  4JLL A;  3KQZ A;  4ETK A;  4ZY1 A;  4IQY A;  2FG1 A;  3EWO A;  1NJR A;  4X2T A;  2BFQ A;  3SIH A;  1BPN A;  2FXK A;  3SIJ A;  3KR4 A;  4JGK A;  2XD7 A;  4ZY0 A;  3H8E A;  3KR5 A;  3EJG A;  3GPQ A;  4ZX8 A;  1TY8 A;  4J5S A;  3V2B A;  3GQE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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