3V2BA

Human poly(adp-ribose) polymerase 15 (artd7, bal3), macro domain 2 in complex with adenosine-5-diphosphoribose
Total Genus 58
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
58
sequence length
176
structure length
176
Chain Sequence
YFQSMTAYEMKIGAITFQVATGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKCKIIIHVPGGKDVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transferase
molecule keywords Poly [ADP-ribose] polymerase 15
total genus 58
structure length 176
sequence length 176
ec nomenclature ec 2.4.2.30: NAD(+) ADP-ribosyltransferase.
pdb deposition date 2011-12-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3v2bA00
4ZYQA 4D86A 1ZR5A 5CBMA 1LANA 4R76A 4JLLA 4ZY1A 3Q71A 4J5QA 4ZY2A 5CB5A 3GPQA 3GPOA 4J4ZA 5FSZA 2BFQA 3H8FA 1HJZA 3EKEA 4R7MA 1LCPA 3H8GA 3EWRA 4GUAA 3Q6ZA 4GVWA 4KYBA 3EJGA 5FSYA 3SIIA 3KQZA 1SPVA 1LAMA 3GPGA 4JCAA 3EWOA 1ZR3A 4K0CA 3IJ3A 4ETJA 2EWBA 3SIJA 2FXKA 2FAVA 3IIDA 4ABKA 5FSXA 1BLLE 5CB3A 3GQOA 3V2BA 2FG1A 3JRUA 4R6TA 3JZTA 3KR5A 1BPMA 2LGRA 2X47A 2XD7A 1VHUA 3SIHA 4ZX8A 3EW5A 2L8RA 3EWQA 4X2TA 1NJRA 1TXZA 1TY8A 4KSIA 5FSUA 4JVVA 2BFRA 1BPNA 1YD9A 4IQYA 3KR4A 2ACFA 4J5RA 4GVVA 3EJFA 4J5SA 4ZY0A 3T8WA 5D8NA 3VFQA 2EEEA 5CMSA 3PEIA 3ETIA 1GYTA 4UMLA 3KZWA 3SIGA 5FSVA 4JGKA 3IIFA 4K3NA 4ESSA 4ETKA 5DUSA 1LAPA 4ABLA 4ZX9A 5E3BA 2DX6A 5HIHA 3H8EA 3V45A 3KQXA 2J9AA 2AFCA 2VRIA 3EWPA 5AILA 4ZI6A 5HOLA 3GQEA 4TU0A
chains in the Genus database with same CATH superfamily
4ZYQA 2JZEA 4D86A 1ZR5A 5CBMA 2W2GA 1LANA 4R76A 2JZDA 4JLLA 4ZY1A 3Q71A 2JZFA 4J5QA 4ZY2A 5CB5A 3GPQA 3GPOA 4J4ZA 5FSZA 2BFQA 3H8FA 1HJZA 3EKEA 4R7MA 1LCPA 3H8GA 3EWRA 4GUAA 3Q6ZA 4GVWA 4KYBA 3EJGA 2WCTA 5FSYA 3SIIA 3KQZA 1SPVA 1LAMA 3GPGA 4JCAA 3EWOA 1ZR3A 4K0CA 3IJ3A 4ETJA 2EWBA 3SIJA 2FXKA 2FAVA 3IIDA 4ABKA 5FSXA 1BLLE 5CB3A 3GQOA 3V2BA 2FG1A 3JRUA 4R6TA 3JZTA 3KR5A 1BPMA 2LGRA 2X47A 2XD7A 1VHUA 3SIHA 4ZX8A 3EW5A 2L8RA 3EWQA 4X2TA 1NJRA 1TXZA 1TY8A 4KSIA 5FSUA 4JVVA 2BFRA 1BPNA 1YD9A 4IQYA 3KR4A 2ACFA 4J5RA 4GVVA 3EJFA 4J5SA 4ZY0A 3T8WA 5D8NA 3VFQA 2EEEA 5CMSA 2RNKA 3PEIA 2KQVA 3ETIA 1GYTA 4UMLA 3KZWA 3SIGA 5FSVA 4JGKA 3IIFA 4K3NA 4ESSA 4ETKA 5DUSA 1LAPA 4ABLA 4ZX9A 5E3BA 2DX6A 5HIHA 3H8EA 3V45A 3KQXA 2J9AA 2AFCA 2VRIA 3EWPA 5AILA 4ZI6A 5HOLA 3GQEA 4TU0A
chains in the Genus database with same CATH topology
4ZYQA 4D86A 1ZR5A 5CBMA 1LANA 4R76A 4JLLA 4ZY1A 3Q71A 4J5QA 4ZY2A 5CB5A 3GPQA 3GPOA 4J4ZA 5FSZA 2BFQA 3H8FA 1HJZA 3EKEA 4R7MA 1LCPA 3H8GA 3EWRA 4GUAA 3Q6ZA 4GVWA 4KYBA 3EJGA 5FSYA 3SIIA 3KQZA 1SPVA 1LAMA 3GPGA 4JCAA 3EWOA 1ZR3A 4K0CA 3IJ3A 4ETJA 2EWBA 3SIJA 2FXKA 2FAVA 3IIDA 4ABKA 5FSXA 1BLLE 5CB3A 3GQOA 3V2BA 2FG1A 3JRUA 4R6TA 3JZTA 3KR5A 1BPMA 2LGRA 2X47A 2XD7A 1VHUA 3SIHA 4ZX8A 3EW5A 2L8RA 3EWQA 4X2TA 1NJRA 1TXZA 1TY8A 4KSIA 5FSUA 4JVVA 2BFRA 1BPNA 1YD9A 4IQYA 3KR4A 2ACFA 4J5RA 4GVVA 3EJFA 4J5SA 4ZY0A 3T8WA 5D8NA 3VFQA 2EEEA 5CMSA 3PEIA 3ETIA 1GYTA 4UMLA 3KZWA 3SIGA 5FSVA 4JGKA 3IIFA 4K3NA 4ESSA 4ETKA 5DUSA 1LAPA 4ABLA 4ZX9A 5E3BA 2DX6A 5HIHA 3H8EA 3V45A 3KQXA 2J9AA 2AFCA 2VRIA 3EWPA 5AILA 4ZI6A 5HOLA 3GQEA 4TU0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZYQ A;  4D86 A;  1ZR5 A;  5CBM A;  1LAN A;  4R76 A;  4JLL A;  4ZY1 A;  3Q71 A;  4J5Q A;  4ZY2 A;  5CB5 A;  3GPQ A;  3GPO A;  4J4Z A;  5FSZ A;  2BFQ A;  3H8F A;  1HJZ A;  3EKE A;  4R7M A;  1LCP A;  3H8G A;  3EWR A;  4GUA A;  3Q6Z A;  4GVW A;  4KYB A;  3EJG A;  5FSY A;  3SII A;  3KQZ A;  1SPV A;  1LAM A;  3GPG A;  4JCA A;  3EWO A;  1ZR3 A;  4K0C A;  3IJ3 A;  4ETJ A;  2EWB A;  3SIJ A;  2FXK A;  2FAV A;  3IID A;  4ABK A;  5FSX A;  1BLL E;  5CB3 A;  3GQO A;  3V2B A;  2FG1 A;  3JRU A;  4R6T A;  3JZT A;  3KR5 A;  1BPM A;  2LGR A;  2X47 A;  2XD7 A;  1VHU A;  3SIH A;  4ZX8 A;  3EW5 A;  2L8R A;  3EWQ A;  4X2T A;  1NJR A;  1TXZ A;  1TY8 A;  4KSI A;  5FSU A;  4JVV A;  2BFR A;  1BPN A;  1YD9 A;  4IQY A;  3KR4 A;  2ACF A;  4J5R A;  4GVV A;  3EJF A;  4J5S A;  4ZY0 A;  3T8W A;  5D8N A;  3VFQ A;  2EEE A;  5CMS A;  3PEI A;  3ETI A;  1GYT A;  4UML A;  3KZW A;  3SIG A;  5FSV A;  4JGK A;  3IIF A;  4K3N A;  4ESS A;  4ETK A;  5DUS A;  1LAP A;  4ABL A;  4ZX9 A;  5E3B A;  2DX6 A;  5HIH A;  3H8E A;  3V45 A;  3KQX A;  2J9A A;  2AFC A;  2VRI A;  3EWP A;  5AIL A;  4ZI6 A;  5HOL A;  3GQE A;  4TU0 A; 
#chains in the Genus database with same CATH topology
 4ZYQ A;  2JZE A;  4D86 A;  1ZR5 A;  5CBM A;  2W2G A;  1LAN A;  4R76 A;  2JZD A;  4JLL A;  4ZY1 A;  3Q71 A;  2JZF A;  4J5Q A;  4ZY2 A;  5CB5 A;  3GPQ A;  3GPO A;  4J4Z A;  5FSZ A;  2BFQ A;  3H8F A;  1HJZ A;  3EKE A;  4R7M A;  1LCP A;  3H8G A;  3EWR A;  4GUA A;  3Q6Z A;  4GVW A;  4KYB A;  3EJG A;  2WCT A;  5FSY A;  3SII A;  3KQZ A;  1SPV A;  1LAM A;  3GPG A;  4JCA A;  3EWO A;  1ZR3 A;  4K0C A;  3IJ3 A;  4ETJ A;  2EWB A;  3SIJ A;  2FXK A;  2FAV A;  3IID A;  4ABK A;  5FSX A;  1BLL E;  5CB3 A;  3GQO A;  3V2B A;  2FG1 A;  3JRU A;  4R6T A;  3JZT A;  3KR5 A;  1BPM A;  2LGR A;  2X47 A;  2XD7 A;  1VHU A;  3SIH A;  4ZX8 A;  3EW5 A;  2L8R A;  3EWQ A;  4X2T A;  1NJR A;  1TXZ A;  1TY8 A;  4KSI A;  5FSU A;  4JVV A;  2BFR A;  1BPN A;  1YD9 A;  4IQY A;  3KR4 A;  2ACF A;  4J5R A;  4GVV A;  3EJF A;  4J5S A;  4ZY0 A;  3T8W A;  5D8N A;  3VFQ A;  2EEE A;  5CMS A;  2RNK A;  3PEI A;  2KQV A;  3ETI A;  1GYT A;  4UML A;  3KZW A;  3SIG A;  5FSV A;  4JGK A;  3IIF A;  4K3N A;  4ESS A;  4ETK A;  5DUS A;  1LAP A;  4ABL A;  4ZX9 A;  5E3B A;  2DX6 A;  5HIH A;  3H8E A;  3V45 A;  3KQX A;  2J9A A;  2AFC A;  2VRI A;  3EWP A;  5AIL A;  4ZI6 A;  5HOL A;  3GQE A;  4TU0 A; 
#chains in the Genus database with same CATH homology
 4ZYQ A;  4D86 A;  1ZR5 A;  5CBM A;  1LAN A;  4R76 A;  4JLL A;  4ZY1 A;  3Q71 A;  4J5Q A;  4ZY2 A;  5CB5 A;  3GPQ A;  3GPO A;  4J4Z A;  5FSZ A;  2BFQ A;  3H8F A;  1HJZ A;  3EKE A;  4R7M A;  1LCP A;  3H8G A;  3EWR A;  4GUA A;  3Q6Z A;  4GVW A;  4KYB A;  3EJG A;  5FSY A;  3SII A;  3KQZ A;  1SPV A;  1LAM A;  3GPG A;  4JCA A;  3EWO A;  1ZR3 A;  4K0C A;  3IJ3 A;  4ETJ A;  2EWB A;  3SIJ A;  2FXK A;  2FAV A;  3IID A;  4ABK A;  5FSX A;  1BLL E;  5CB3 A;  3GQO A;  3V2B A;  2FG1 A;  3JRU A;  4R6T A;  3JZT A;  3KR5 A;  1BPM A;  2LGR A;  2X47 A;  2XD7 A;  1VHU A;  3SIH A;  4ZX8 A;  3EW5 A;  2L8R A;  3EWQ A;  4X2T A;  1NJR A;  1TXZ A;  1TY8 A;  4KSI A;  5FSU A;  4JVV A;  2BFR A;  1BPN A;  1YD9 A;  4IQY A;  3KR4 A;  2ACF A;  4J5R A;  4GVV A;  3EJF A;  4J5S A;  4ZY0 A;  3T8W A;  5D8N A;  3VFQ A;  2EEE A;  5CMS A;  3PEI A;  3ETI A;  1GYT A;  4UML A;  3KZW A;  3SIG A;  5FSV A;  4JGK A;  3IIF A;  4K3N A;  4ESS A;  4ETK A;  5DUS A;  1LAP A;  4ABL A;  4ZX9 A;  5E3B A;  2DX6 A;  5HIH A;  3H8E A;  3V45 A;  3KQX A;  2J9A A;  2AFC A;  2VRI A;  3EWP A;  5AIL A;  4ZI6 A;  5HOL A;  3GQE A;  4TU0 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...