3V2BA

Human poly(adp-ribose) polymerase 15 (artd7, bal3), macro domain 2 in complex with adenosine-5-diphosphoribose
Total Genus 58
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
58
sequence length
176
structure length
176
Chain Sequence
YFQSMTAYEMKIGAITFQVATGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKCKIIIHVPGGKDVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transferase
molecule keywords Poly [ADP-ribose] polymerase 15
total genus 58
structure length 176
sequence length 176
ec nomenclature ec 2.4.2.30: NAD(+) ADP-ribosyltransferase.
pdb deposition date 2011-12-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3v2bA00
2FXKA 3GPOA 4TU0A 3H8GA 5FSYA 1NJRA 5AILA 4R6TA 3KZWA 5FSVA 4ABKA 4ZX8A 2EEEA 3GQEA 3H8FA 3GQOA 3EWRA 3KR5A 3JRUA 5HOLA 2VRIA 4X2TA 4JVVA 3EJFA 4JGKA 3H8EA 3IIDA 2L8RA 3KQXA 1LANA 4UMLA 4ZX9A 3EWOA 4ZY1A 5CBMA 5FSZA 4ETJA 4ABLA 1BPMA 3SIIA 5FSUA 1ZR5A 3IIFA 3V2BA 2J9AA 4GUAA 5E3BA 3SIHA 3ETIA 1LAMA 1LAPA 4J5QA 3EKEA 4KYBA 5D8NA 2LGRA 4ZYQA 1ZR3A 3T8WA 4R7MA 1HJZA 1YD9A 3EW5A 4JCAA 2BFQA 4R76A 3V45A 2EWBA 1BLLE 1SPVA 3GPGA 3EJGA 4J4ZA 2FAVA 3IJ3A 5CB5A 4KSIA 2FG1A 3VFQA 4J5SA 1TXZA 4K3NA 3SIGA 3KR4A 4ZY0A 2X47A 2DX6A 3Q71A 1VHUA 3JZTA 2BFRA 4ZY2A 5CB3A 4ZI6A 3SIJA 2AFCA 4GVWA 5HIHA 5DUSA 5CMSA 1BPNA 3PEIA 3EWPA 1LCPA 4JLLA 4ETKA 4K0CA 2XD7A 1TY8A 5FSXA 4D86A 4J5RA 3Q6ZA 4GVVA 4ESSA 2ACFA 3KQZA 1GYTA 3GPQA 4IQYA 3EWQA
chains in the Genus database with same CATH superfamily
2FXKA 3GPOA 4TU0A 3H8GA 5FSYA 1NJRA 5AILA 4R6TA 3KZWA 2JZFA 5FSVA 4ABKA 4ZX8A 2EEEA 3GQEA 3H8FA 3GQOA 2W2GA 3EWRA 3KR5A 2WCTA 3JRUA 5HOLA 2VRIA 4X2TA 4JVVA 3EJFA 4JGKA 3H8EA 3IIDA 2L8RA 3KQXA 1LANA 4UMLA 4ZX9A 3EWOA 4ZY1A 5CBMA 5FSZA 4ETJA 4ABLA 2JZDA 1BPMA 3SIIA 5FSUA 1ZR5A 3IIFA 3V2BA 2J9AA 4GUAA 2JZEA 5E3BA 3SIHA 3ETIA 1LAMA 1LAPA 4J5QA 3EKEA 4KYBA 5D8NA 2LGRA 4ZYQA 1ZR3A 3T8WA 4R7MA 1HJZA 1YD9A 3EW5A 4JCAA 2BFQA 4R76A 3V45A 2EWBA 1BLLE 1SPVA 3GPGA 3EJGA 4J4ZA 2FAVA 3IJ3A 5CB5A 4KSIA 2FG1A 2KQVA 3VFQA 4J5SA 1TXZA 4K3NA 3SIGA 3KR4A 4ZY0A 2X47A 2DX6A 3Q71A 1VHUA 3JZTA 2BFRA 4ZY2A 5CB3A 4ZI6A 3SIJA 2RNKA 2AFCA 4GVWA 5HIHA 5DUSA 5CMSA 1BPNA 3PEIA 3EWPA 1LCPA 4JLLA 4ETKA 4K0CA 2XD7A 1TY8A 5FSXA 4D86A 4J5RA 3Q6ZA 4GVVA 4ESSA 2ACFA 3KQZA 1GYTA 3GPQA 4IQYA 3EWQA
chains in the Genus database with same CATH topology
2FXKA 3GPOA 4TU0A 3H8GA 5FSYA 1NJRA 5AILA 4R6TA 3KZWA 5FSVA 4ABKA 4ZX8A 2EEEA 3GQEA 3H8FA 3GQOA 3EWRA 3KR5A 3JRUA 5HOLA 2VRIA 4X2TA 4JVVA 3EJFA 4JGKA 3H8EA 3IIDA 2L8RA 3KQXA 1LANA 4UMLA 4ZX9A 3EWOA 4ZY1A 5CBMA 5FSZA 4ETJA 4ABLA 1BPMA 3SIIA 5FSUA 1ZR5A 3IIFA 3V2BA 2J9AA 4GUAA 5E3BA 3SIHA 3ETIA 1LAMA 1LAPA 4J5QA 3EKEA 4KYBA 5D8NA 2LGRA 4ZYQA 1ZR3A 3T8WA 4R7MA 1HJZA 1YD9A 3EW5A 4JCAA 2BFQA 4R76A 3V45A 2EWBA 1BLLE 1SPVA 3GPGA 3EJGA 4J4ZA 2FAVA 3IJ3A 5CB5A 4KSIA 2FG1A 3VFQA 4J5SA 1TXZA 4K3NA 3SIGA 3KR4A 4ZY0A 2X47A 2DX6A 3Q71A 1VHUA 3JZTA 2BFRA 4ZY2A 5CB3A 4ZI6A 3SIJA 2AFCA 4GVWA 5HIHA 5DUSA 5CMSA 1BPNA 3PEIA 3EWPA 1LCPA 4JLLA 4ETKA 4K0CA 2XD7A 1TY8A 5FSXA 4D86A 4J5RA 3Q6ZA 4GVVA 4ESSA 2ACFA 3KQZA 1GYTA 3GPQA 4IQYA 3EWQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FXK A;  3GPO A;  4TU0 A;  3H8G A;  5FSY A;  1NJR A;  5AIL A;  4R6T A;  3KZW A;  5FSV A;  4ABK A;  4ZX8 A;  2EEE A;  3GQE A;  3H8F A;  3GQO A;  3EWR A;  3KR5 A;  3JRU A;  5HOL A;  2VRI A;  4X2T A;  4JVV A;  3EJF A;  4JGK A;  3H8E A;  3IID A;  2L8R A;  3KQX A;  1LAN A;  4UML A;  4ZX9 A;  3EWO A;  4ZY1 A;  5CBM A;  5FSZ A;  4ETJ A;  4ABL A;  1BPM A;  3SII A;  5FSU A;  1ZR5 A;  3IIF A;  3V2B A;  2J9A A;  4GUA A;  5E3B A;  3SIH A;  3ETI A;  1LAM A;  1LAP A;  4J5Q A;  3EKE A;  4KYB A;  5D8N A;  2LGR A;  4ZYQ A;  1ZR3 A;  3T8W A;  4R7M A;  1HJZ A;  1YD9 A;  3EW5 A;  4JCA A;  2BFQ A;  4R76 A;  3V45 A;  2EWB A;  1BLL E;  1SPV A;  3GPG A;  3EJG A;  4J4Z A;  2FAV A;  3IJ3 A;  5CB5 A;  4KSI A;  2FG1 A;  3VFQ A;  4J5S A;  1TXZ A;  4K3N A;  3SIG A;  3KR4 A;  4ZY0 A;  2X47 A;  2DX6 A;  3Q71 A;  1VHU A;  3JZT A;  2BFR A;  4ZY2 A;  5CB3 A;  4ZI6 A;  3SIJ A;  2AFC A;  4GVW A;  5HIH A;  5DUS A;  5CMS A;  1BPN A;  3PEI A;  3EWP A;  1LCP A;  4JLL A;  4ETK A;  4K0C A;  2XD7 A;  1TY8 A;  5FSX A;  4D86 A;  4J5R A;  3Q6Z A;  4GVV A;  4ESS A;  2ACF A;  3KQZ A;  1GYT A;  3GPQ A;  4IQY A;  3EWQ A; 
#chains in the Genus database with same CATH topology
 2FXK A;  3GPO A;  4TU0 A;  3H8G A;  5FSY A;  1NJR A;  5AIL A;  4R6T A;  3KZW A;  2JZF A;  5FSV A;  4ABK A;  4ZX8 A;  2EEE A;  3GQE A;  3H8F A;  3GQO A;  2W2G A;  3EWR A;  3KR5 A;  2WCT A;  3JRU A;  5HOL A;  2VRI A;  4X2T A;  4JVV A;  3EJF A;  4JGK A;  3H8E A;  3IID A;  2L8R A;  3KQX A;  1LAN A;  4UML A;  4ZX9 A;  3EWO A;  4ZY1 A;  5CBM A;  5FSZ A;  4ETJ A;  4ABL A;  2JZD A;  1BPM A;  3SII A;  5FSU A;  1ZR5 A;  3IIF A;  3V2B A;  2J9A A;  4GUA A;  2JZE A;  5E3B A;  3SIH A;  3ETI A;  1LAM A;  1LAP A;  4J5Q A;  3EKE A;  4KYB A;  5D8N A;  2LGR A;  4ZYQ A;  1ZR3 A;  3T8W A;  4R7M A;  1HJZ A;  1YD9 A;  3EW5 A;  4JCA A;  2BFQ A;  4R76 A;  3V45 A;  2EWB A;  1BLL E;  1SPV A;  3GPG A;  3EJG A;  4J4Z A;  2FAV A;  3IJ3 A;  5CB5 A;  4KSI A;  2FG1 A;  2KQV A;  3VFQ A;  4J5S A;  1TXZ A;  4K3N A;  3SIG A;  3KR4 A;  4ZY0 A;  2X47 A;  2DX6 A;  3Q71 A;  1VHU A;  3JZT A;  2BFR A;  4ZY2 A;  5CB3 A;  4ZI6 A;  3SIJ A;  2RNK A;  2AFC A;  4GVW A;  5HIH A;  5DUS A;  5CMS A;  1BPN A;  3PEI A;  3EWP A;  1LCP A;  4JLL A;  4ETK A;  4K0C A;  2XD7 A;  1TY8 A;  5FSX A;  4D86 A;  4J5R A;  3Q6Z A;  4GVV A;  4ESS A;  2ACF A;  3KQZ A;  1GYT A;  3GPQ A;  4IQY A;  3EWQ A; 
#chains in the Genus database with same CATH homology
 2FXK A;  3GPO A;  4TU0 A;  3H8G A;  5FSY A;  1NJR A;  5AIL A;  4R6T A;  3KZW A;  5FSV A;  4ABK A;  4ZX8 A;  2EEE A;  3GQE A;  3H8F A;  3GQO A;  3EWR A;  3KR5 A;  3JRU A;  5HOL A;  2VRI A;  4X2T A;  4JVV A;  3EJF A;  4JGK A;  3H8E A;  3IID A;  2L8R A;  3KQX A;  1LAN A;  4UML A;  4ZX9 A;  3EWO A;  4ZY1 A;  5CBM A;  5FSZ A;  4ETJ A;  4ABL A;  1BPM A;  3SII A;  5FSU A;  1ZR5 A;  3IIF A;  3V2B A;  2J9A A;  4GUA A;  5E3B A;  3SIH A;  3ETI A;  1LAM A;  1LAP A;  4J5Q A;  3EKE A;  4KYB A;  5D8N A;  2LGR A;  4ZYQ A;  1ZR3 A;  3T8W A;  4R7M A;  1HJZ A;  1YD9 A;  3EW5 A;  4JCA A;  2BFQ A;  4R76 A;  3V45 A;  2EWB A;  1BLL E;  1SPV A;  3GPG A;  3EJG A;  4J4Z A;  2FAV A;  3IJ3 A;  5CB5 A;  4KSI A;  2FG1 A;  3VFQ A;  4J5S A;  1TXZ A;  4K3N A;  3SIG A;  3KR4 A;  4ZY0 A;  2X47 A;  2DX6 A;  3Q71 A;  1VHU A;  3JZT A;  2BFR A;  4ZY2 A;  5CB3 A;  4ZI6 A;  3SIJ A;  2AFC A;  4GVW A;  5HIH A;  5DUS A;  5CMS A;  1BPN A;  3PEI A;  3EWP A;  1LCP A;  4JLL A;  4ETK A;  4K0C A;  2XD7 A;  1TY8 A;  5FSX A;  4D86 A;  4J5R A;  3Q6Z A;  4GVV A;  4ESS A;  2ACF A;  3KQZ A;  1GYT A;  3GPQ A;  4IQY A;  3EWQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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