4K0CA

Crystal structure of the computationally designed serine hydrolase. northeast structural genomics consortium (nesg) target or317
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
160
structure length
160
Chain Sequence
ARIRDVQGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIGKIRVGEAAVTGAGNLPVRYVIHAAVLGDEPASLETVRKATKSALEKAVELGLKTVAFTVPGAWVGGLPAEAVRRVMVEEIKKAPDTLEVTGVHGTEKSAEACRRARLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords designed serine hydrolase
publication title Northeast Structural Genomics Consortium Target OR317
rcsb
source organism Synthetic construct
total genus 50
structure length 160
sequence length 160
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-04-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 4k0cA00
4D86A 5DUSA 2XD7A 3H8EA 1TXZA 1ZR5A 4J5QA 1BPMA 4JLLA 1BLLE 1YD9A 3EJFA 3KR5A 3GPGA 3JZTA 4KSIA 4R76A 4ZX9A 3EWRA 4JCAA 4IQYA 3IJ3A 4J5RA 3IIDA 4ZY0A 4GUAA 4UMLA 4X2TA 3KZWA 3EWOA 1VHUA 3V45A 3KQZA 3GPQA 3EWQA 2FG1A 1LCPA 2DX6A 5FSVA 3SIHA 1TY8A 2AFCA 3GQEA 3JRUA 1LAMA 2X47A 3VFQA 5CB3A 2L8RA 2VRIA 3Q6ZA 3H8GA 3EKEA 3T8WA 3H8FA 2J9AA 2ACFA 2BFQA 3GPOA 4J5SA 4ESSA 2EEEA 4TU0A 5FSZA 1LANA 3EWPA 2LGRA 3SIJA 4ZX8A 4K0CA 4ZY2A 2EWBA 3Q71A 5D8NA 5FSYA 4J4ZA 3PEIA 4JGKA 1GYTA 4ZYQA 4K3NA 5CB5A 1SPVA 3EJGA 5CBMA 3ETIA 5CMSA 4R6TA 4JVVA 1LAPA 1ZR3A 4ABKA 4ZY1A 3SIGA 2BFRA 4GVVA 1BPNA 4ETKA 3IIFA 3V2BA 5FSXA 1NJRA 4KYBA 5AILA 1HJZA 2FAVA 3SIIA 4ZI6A 4ABLA 5E3BA 2FXKA 5FSUA 3GQOA 5HOLA 5HIHA 4ETJA 3KQXA 3KR4A 4GVWA 4R7MA 3EW5A
chains in the Genus database with same CATH superfamily
4D86A 5DUSA 2XD7A 3H8EA 1TXZA 1ZR5A 4J5QA 1BPMA 4JLLA 1BLLE 1YD9A 3EJFA 3KR5A 3GPGA 3JZTA 4KSIA 4R76A 4ZX9A 3EWRA 4JCAA 4IQYA 3IJ3A 4J5RA 3IIDA 4ZY0A 4GUAA 4UMLA 4X2TA 3KZWA 3EWOA 1VHUA 3V45A 3KQZA 3GPQA 3EWQA 2FG1A 1LCPA 2DX6A 5FSVA 3SIHA 1TY8A 2AFCA 3GQEA 3JRUA 1LAMA 2X47A 3VFQA 5CB3A 2L8RA 2VRIA 3Q6ZA 3H8GA 3EKEA 2KQVA 3T8WA 3H8FA 2J9AA 2ACFA 2BFQA 4J5SA 2RNKA 3GPOA 2EEEA 4ESSA 4TU0A 5FSZA 1LANA 3EWPA 2LGRA 3SIJA 4ZX8A 4K0CA 4ZY2A 2WCTA 2EWBA 3Q71A 5D8NA 5FSYA 4J4ZA 3PEIA 2W2GA 4JGKA 1GYTA 4ZYQA 4K3NA 5CB5A 1SPVA 3EJGA 5CBMA 3ETIA 2JZEA 5CMSA 4R6TA 4JVVA 1LAPA 1ZR3A 2JZFA 4ABKA 4ZY1A 3SIGA 2BFRA 4GVVA 1BPNA 4ETKA 3IIFA 3V2BA 5FSXA 1NJRA 4KYBA 5AILA 1HJZA 2FAVA 3SIIA 4ZI6A 4ABLA 5E3BA 2FXKA 5FSUA 3GQOA 5HOLA 2JZDA 5HIHA 4ETJA 3KQXA 3KR4A 4GVWA 4R7MA 3EW5A
chains in the Genus database with same CATH topology
4D86A 5DUSA 2XD7A 3H8EA 1TXZA 1ZR5A 4J5QA 1BPMA 4JLLA 1BLLE 1YD9A 3EJFA 3KR5A 3GPGA 3JZTA 4KSIA 4R76A 4ZX9A 3EWRA 4JCAA 4IQYA 3IJ3A 4J5RA 3IIDA 4ZY0A 4GUAA 4UMLA 4X2TA 3KZWA 3EWOA 1VHUA 3V45A 3KQZA 3GPQA 3EWQA 2FG1A 1LCPA 2DX6A 5FSVA 3SIHA 1TY8A 2AFCA 3GQEA 3JRUA 1LAMA 2X47A 3VFQA 5CB3A 2L8RA 2VRIA 3Q6ZA 3H8GA 3EKEA 3T8WA 3H8FA 2J9AA 2ACFA 2BFQA 3GPOA 4J5SA 4ESSA 2EEEA 4TU0A 5FSZA 1LANA 3EWPA 2LGRA 3SIJA 4ZX8A 4K0CA 4ZY2A 2EWBA 3Q71A 5D8NA 5FSYA 4J4ZA 3PEIA 4JGKA 1GYTA 4ZYQA 4K3NA 5CB5A 1SPVA 3EJGA 5CBMA 3ETIA 5CMSA 4R6TA 4JVVA 1LAPA 1ZR3A 4ABKA 4ZY1A 3SIGA 2BFRA 4GVVA 1BPNA 4ETKA 3IIFA 3V2BA 5FSXA 1NJRA 4KYBA 5AILA 1HJZA 2FAVA 3SIIA 4ZI6A 4ABLA 5E3BA 2FXKA 5FSUA 3GQOA 5HOLA 5HIHA 4ETJA 3KQXA 3KR4A 4GVWA 4R7MA 3EW5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4D86 A;  5DUS A;  2XD7 A;  3H8E A;  1TXZ A;  1ZR5 A;  4J5Q A;  1BPM A;  4JLL A;  1BLL E;  1YD9 A;  3EJF A;  3KR5 A;  3GPG A;  3JZT A;  4KSI A;  4R76 A;  4ZX9 A;  3EWR A;  4JCA A;  4IQY A;  3IJ3 A;  4J5R A;  3IID A;  4ZY0 A;  4GUA A;  4UML A;  4X2T A;  3KZW A;  3EWO A;  1VHU A;  3V45 A;  3KQZ A;  3GPQ A;  3EWQ A;  2FG1 A;  1LCP A;  2DX6 A;  5FSV A;  3SIH A;  1TY8 A;  2AFC A;  3GQE A;  3JRU A;  1LAM A;  2X47 A;  3VFQ A;  5CB3 A;  2L8R A;  2VRI A;  3Q6Z A;  3H8G A;  3EKE A;  3T8W A;  3H8F A;  2J9A A;  2ACF A;  2BFQ A;  3GPO A;  4J5S A;  4ESS A;  2EEE A;  4TU0 A;  5FSZ A;  1LAN A;  3EWP A;  2LGR A;  3SIJ A;  4ZX8 A;  4K0C A;  4ZY2 A;  2EWB A;  3Q71 A;  5D8N A;  5FSY A;  4J4Z A;  3PEI A;  4JGK A;  1GYT A;  4ZYQ A;  4K3N A;  5CB5 A;  1SPV A;  3EJG A;  5CBM A;  3ETI A;  5CMS A;  4R6T A;  4JVV A;  1LAP A;  1ZR3 A;  4ABK A;  4ZY1 A;  3SIG A;  2BFR A;  4GVV A;  1BPN A;  4ETK A;  3IIF A;  3V2B A;  5FSX A;  1NJR A;  4KYB A;  5AIL A;  1HJZ A;  2FAV A;  3SII A;  4ZI6 A;  4ABL A;  5E3B A;  2FXK A;  5FSU A;  3GQO A;  5HOL A;  5HIH A;  4ETJ A;  3KQX A;  3KR4 A;  4GVW A;  4R7M A;  3EW5 A; 
#chains in the Genus database with same CATH topology
 4D86 A;  5DUS A;  2XD7 A;  3H8E A;  1TXZ A;  1ZR5 A;  4J5Q A;  1BPM A;  4JLL A;  1BLL E;  1YD9 A;  3EJF A;  3KR5 A;  3GPG A;  3JZT A;  4KSI A;  4R76 A;  4ZX9 A;  3EWR A;  4JCA A;  4IQY A;  3IJ3 A;  4J5R A;  3IID A;  4ZY0 A;  4GUA A;  4UML A;  4X2T A;  3KZW A;  3EWO A;  1VHU A;  3V45 A;  3KQZ A;  3GPQ A;  3EWQ A;  2FG1 A;  1LCP A;  2DX6 A;  5FSV A;  3SIH A;  1TY8 A;  2AFC A;  3GQE A;  3JRU A;  1LAM A;  2X47 A;  3VFQ A;  5CB3 A;  2L8R A;  2VRI A;  3Q6Z A;  3H8G A;  3EKE A;  2KQV A;  3T8W A;  3H8F A;  2J9A A;  2ACF A;  2BFQ A;  4J5S A;  2RNK A;  3GPO A;  2EEE A;  4ESS A;  4TU0 A;  5FSZ A;  1LAN A;  3EWP A;  2LGR A;  3SIJ A;  4ZX8 A;  4K0C A;  4ZY2 A;  2WCT A;  2EWB A;  3Q71 A;  5D8N A;  5FSY A;  4J4Z A;  3PEI A;  2W2G A;  4JGK A;  1GYT A;  4ZYQ A;  4K3N A;  5CB5 A;  1SPV A;  3EJG A;  5CBM A;  3ETI A;  2JZE A;  5CMS A;  4R6T A;  4JVV A;  1LAP A;  1ZR3 A;  2JZF A;  4ABK A;  4ZY1 A;  3SIG A;  2BFR A;  4GVV A;  1BPN A;  4ETK A;  3IIF A;  3V2B A;  5FSX A;  1NJR A;  4KYB A;  5AIL A;  1HJZ A;  2FAV A;  3SII A;  4ZI6 A;  4ABL A;  5E3B A;  2FXK A;  5FSU A;  3GQO A;  5HOL A;  2JZD A;  5HIH A;  4ETJ A;  3KQX A;  3KR4 A;  4GVW A;  4R7M A;  3EW5 A; 
#chains in the Genus database with same CATH homology
 4D86 A;  5DUS A;  2XD7 A;  3H8E A;  1TXZ A;  1ZR5 A;  4J5Q A;  1BPM A;  4JLL A;  1BLL E;  1YD9 A;  3EJF A;  3KR5 A;  3GPG A;  3JZT A;  4KSI A;  4R76 A;  4ZX9 A;  3EWR A;  4JCA A;  4IQY A;  3IJ3 A;  4J5R A;  3IID A;  4ZY0 A;  4GUA A;  4UML A;  4X2T A;  3KZW A;  3EWO A;  1VHU A;  3V45 A;  3KQZ A;  3GPQ A;  3EWQ A;  2FG1 A;  1LCP A;  2DX6 A;  5FSV A;  3SIH A;  1TY8 A;  2AFC A;  3GQE A;  3JRU A;  1LAM A;  2X47 A;  3VFQ A;  5CB3 A;  2L8R A;  2VRI A;  3Q6Z A;  3H8G A;  3EKE A;  3T8W A;  3H8F A;  2J9A A;  2ACF A;  2BFQ A;  3GPO A;  4J5S A;  4ESS A;  2EEE A;  4TU0 A;  5FSZ A;  1LAN A;  3EWP A;  2LGR A;  3SIJ A;  4ZX8 A;  4K0C A;  4ZY2 A;  2EWB A;  3Q71 A;  5D8N A;  5FSY A;  4J4Z A;  3PEI A;  4JGK A;  1GYT A;  4ZYQ A;  4K3N A;  5CB5 A;  1SPV A;  3EJG A;  5CBM A;  3ETI A;  5CMS A;  4R6T A;  4JVV A;  1LAP A;  1ZR3 A;  4ABK A;  4ZY1 A;  3SIG A;  2BFR A;  4GVV A;  1BPN A;  4ETK A;  3IIF A;  3V2B A;  5FSX A;  1NJR A;  4KYB A;  5AIL A;  1HJZ A;  2FAV A;  3SII A;  4ZI6 A;  4ABL A;  5E3B A;  2FXK A;  5FSU A;  3GQO A;  5HOL A;  5HIH A;  4ETJ A;  3KQX A;  3KR4 A;  4GVW A;  4R7M A;  3EW5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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