3EWPA

Complex of substrate adp-ribose with ibv nsp3 adrp domain
Total Genus 56
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
56
sequence length
177
structure length
177
Chain Sequence
LGSVKPATCEKPKFLEYKTCVGDLAVVIAKALDEFKEFCIVNAANEHMSHGGGVAKAIADFCGPDFVEYCADYVKKHGPQQKLVTPSFVKGIQCVNNVVGPRHGDSNLREKLVAAYKSVLVGGVVNYVVPVLSSGIFGVDFKISIDAMREAFKGCAIRVLLFSLSQEHIDYFDATCK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Avian infectious bronchitis virus
publication title Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
pubmed doi rcsb
molecule keywords Non-structural protein 3
total genus 56
structure length 177
sequence length 177
chains with identical sequence B
ec nomenclature ec 3.4.22.-:
pdb deposition date 2008-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3ewpA00
3H8EA 4GUAA 3GQEA 2AFCA 1SPVA 3ETIA 5D8NA 4R76A 1BPMA 4JGKA 1VHUA 4ABKA 3H8GA 2L8RA 1LCPA 3Q71A 3EWRA 4GVVA 3EJGA 5DUSA 2FXKA 1LAMA 3GPOA 2ACFA 1YD9A 1NJRA 4ZX8A 4X2TA 1BLLE 1HJZA 5CBMA 4J5QA 3KZWA 3SIHA 5CMSA 2EEEA 3SIIA 2FAVA 2FG1A 5FSZA 5HIHA 3SIJA 3EKEA 1GYTA 2LGRA 3GQOA 3EW5A 2EWBA 4JVVA 1ZR3A 3KQZA 2BFQA 3KQXA 4J5SA 4GVWA 5HOLA 4ZY2A 3EJFA 3KR5A 2XD7A 4ZY1A 4TU0A 3V45A 1ZR5A 5CB3A 5FSXA 5CB5A 4R7MA 4ZYQA 3EWQA 4ZI6A 4ETJA 2BFRA 5FSUA 5AILA 4ZY0A 4KSIA 3JZTA 4IQYA 3V2BA 5FSYA 3JRUA 4J4ZA 3IJ3A 1LAPA 1BPNA 3VFQA 1TXZA 3H8FA 4ZX9A 4ABLA 1LANA 3EWOA 3IIDA 3SIGA 2J9AA 3EWPA 3PEIA 2X47A 3Q6ZA 5FSVA 3T8WA 4D86A 4ESSA 2DX6A 3GPGA 4J5RA 4JCAA 4ETKA 3KR4A 5E3BA 4K3NA 4R6TA 3IIFA 4UMLA 4JLLA 3GPQA 2VRIA 1TY8A 4K0CA 4KYBA
chains in the Genus database with same CATH superfamily
3H8EA 4GUAA 3GQEA 2AFCA 1SPVA 2KQVA 3ETIA 5D8NA 4R76A 1BPMA 4JGKA 1VHUA 4ABKA 3H8GA 2L8RA 1LCPA 3Q71A 3EWRA 4GVVA 3EJGA 5DUSA 2FXKA 1LAMA 3GPOA 2ACFA 2JZFA 1YD9A 1NJRA 4ZX8A 4X2TA 1BLLE 1HJZA 5CBMA 4J5QA 3KZWA 3SIHA 5CMSA 2EEEA 3SIIA 2FAVA 2FG1A 5FSZA 5HIHA 3SIJA 3EKEA 1GYTA 2LGRA 3GQOA 3EW5A 2EWBA 4JVVA 1ZR3A 3KQZA 2BFQA 3KQXA 4J5SA 4GVWA 5HOLA 4ZY2A 3EJFA 3KR5A 2XD7A 4ZY1A 4TU0A 3V45A 1ZR5A 2W2GA 5CB3A 5FSXA 2WCTA 5CB5A 4R7MA 4ZYQA 3EWQA 4ZI6A 4ETJA 2JZEA 2BFRA 5FSUA 5AILA 4ZY0A 4KSIA 3JZTA 4IQYA 3V2BA 5FSYA 3JRUA 4J4ZA 3IJ3A 1LAPA 1BPNA 3VFQA 1TXZA 3H8FA 4ZX9A 4ABLA 1LANA 3EWOA 3IIDA 3SIGA 2J9AA 3EWPA 3PEIA 2RNKA 2X47A 3Q6ZA 5FSVA 3T8WA 4D86A 4ESSA 2DX6A 3GPGA 4J5RA 2JZDA 4JCAA 4ETKA 3KR4A 5E3BA 4K3NA 4R6TA 3IIFA 4UMLA 4JLLA 3GPQA 2VRIA 1TY8A 4K0CA 4KYBA
chains in the Genus database with same CATH topology
3H8EA 4GUAA 3GQEA 2AFCA 1SPVA 3ETIA 5D8NA 4R76A 1BPMA 4JGKA 1VHUA 4ABKA 3H8GA 2L8RA 1LCPA 3Q71A 3EWRA 4GVVA 3EJGA 5DUSA 2FXKA 1LAMA 3GPOA 2ACFA 1YD9A 1NJRA 4ZX8A 4X2TA 1BLLE 1HJZA 5CBMA 4J5QA 3KZWA 3SIHA 5CMSA 2EEEA 3SIIA 2FAVA 2FG1A 5FSZA 5HIHA 3SIJA 3EKEA 1GYTA 2LGRA 3GQOA 3EW5A 2EWBA 4JVVA 1ZR3A 3KQZA 2BFQA 3KQXA 4J5SA 4GVWA 5HOLA 4ZY2A 3EJFA 3KR5A 2XD7A 4ZY1A 4TU0A 3V45A 1ZR5A 5CB3A 5FSXA 5CB5A 4R7MA 4ZYQA 3EWQA 4ZI6A 4ETJA 2BFRA 5FSUA 5AILA 4ZY0A 4KSIA 3JZTA 4IQYA 3V2BA 5FSYA 3JRUA 4J4ZA 3IJ3A 1LAPA 1BPNA 3VFQA 1TXZA 3H8FA 4ZX9A 4ABLA 1LANA 3EWOA 3IIDA 3SIGA 2J9AA 3EWPA 3PEIA 2X47A 3Q6ZA 5FSVA 3T8WA 4D86A 4ESSA 2DX6A 3GPGA 4J5RA 4JCAA 4ETKA 3KR4A 5E3BA 4K3NA 4R6TA 3IIFA 4UMLA 4JLLA 3GPQA 2VRIA 1TY8A 4K0CA 4KYBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3H8E A;  4GUA A;  3GQE A;  2AFC A;  1SPV A;  3ETI A;  5D8N A;  4R76 A;  1BPM A;  4JGK A;  1VHU A;  4ABK A;  3H8G A;  2L8R A;  1LCP A;  3Q71 A;  3EWR A;  4GVV A;  3EJG A;  5DUS A;  2FXK A;  1LAM A;  3GPO A;  2ACF A;  1YD9 A;  1NJR A;  4ZX8 A;  4X2T A;  1BLL E;  1HJZ A;  5CBM A;  4J5Q A;  3KZW A;  3SIH A;  5CMS A;  2EEE A;  3SII A;  2FAV A;  2FG1 A;  5FSZ A;  5HIH A;  3SIJ A;  3EKE A;  1GYT A;  2LGR A;  3GQO A;  3EW5 A;  2EWB A;  4JVV A;  1ZR3 A;  3KQZ A;  2BFQ A;  3KQX A;  4J5S A;  4GVW A;  5HOL A;  4ZY2 A;  3EJF A;  3KR5 A;  2XD7 A;  4ZY1 A;  4TU0 A;  3V45 A;  1ZR5 A;  5CB3 A;  5FSX A;  5CB5 A;  4R7M A;  4ZYQ A;  3EWQ A;  4ZI6 A;  4ETJ A;  2BFR A;  5FSU A;  5AIL A;  4ZY0 A;  4KSI A;  3JZT A;  4IQY A;  3V2B A;  5FSY A;  3JRU A;  4J4Z A;  3IJ3 A;  1LAP A;  1BPN A;  3VFQ A;  1TXZ A;  3H8F A;  4ZX9 A;  4ABL A;  1LAN A;  3EWO A;  3IID A;  3SIG A;  2J9A A;  3EWP A;  3PEI A;  2X47 A;  3Q6Z A;  5FSV A;  3T8W A;  4D86 A;  4ESS A;  2DX6 A;  3GPG A;  4J5R A;  4JCA A;  4ETK A;  3KR4 A;  5E3B A;  4K3N A;  4R6T A;  3IIF A;  4UML A;  4JLL A;  3GPQ A;  2VRI A;  1TY8 A;  4K0C A;  4KYB A; 
#chains in the Genus database with same CATH topology
 3H8E A;  4GUA A;  3GQE A;  2AFC A;  1SPV A;  2KQV A;  3ETI A;  5D8N A;  4R76 A;  1BPM A;  4JGK A;  1VHU A;  4ABK A;  3H8G A;  2L8R A;  1LCP A;  3Q71 A;  3EWR A;  4GVV A;  3EJG A;  5DUS A;  2FXK A;  1LAM A;  3GPO A;  2ACF A;  2JZF A;  1YD9 A;  1NJR A;  4ZX8 A;  4X2T A;  1BLL E;  1HJZ A;  5CBM A;  4J5Q A;  3KZW A;  3SIH A;  5CMS A;  2EEE A;  3SII A;  2FAV A;  2FG1 A;  5FSZ A;  5HIH A;  3SIJ A;  3EKE A;  1GYT A;  2LGR A;  3GQO A;  3EW5 A;  2EWB A;  4JVV A;  1ZR3 A;  3KQZ A;  2BFQ A;  3KQX A;  4J5S A;  4GVW A;  5HOL A;  4ZY2 A;  3EJF A;  3KR5 A;  2XD7 A;  4ZY1 A;  4TU0 A;  3V45 A;  1ZR5 A;  2W2G A;  5CB3 A;  5FSX A;  2WCT A;  5CB5 A;  4R7M A;  4ZYQ A;  3EWQ A;  4ZI6 A;  4ETJ A;  2JZE A;  2BFR A;  5FSU A;  5AIL A;  4ZY0 A;  4KSI A;  3JZT A;  4IQY A;  3V2B A;  5FSY A;  3JRU A;  4J4Z A;  3IJ3 A;  1LAP A;  1BPN A;  3VFQ A;  1TXZ A;  3H8F A;  4ZX9 A;  4ABL A;  1LAN A;  3EWO A;  3IID A;  3SIG A;  2J9A A;  3EWP A;  3PEI A;  2RNK A;  2X47 A;  3Q6Z A;  5FSV A;  3T8W A;  4D86 A;  4ESS A;  2DX6 A;  3GPG A;  4J5R A;  2JZD A;  4JCA A;  4ETK A;  3KR4 A;  5E3B A;  4K3N A;  4R6T A;  3IIF A;  4UML A;  4JLL A;  3GPQ A;  2VRI A;  1TY8 A;  4K0C A;  4KYB A; 
#chains in the Genus database with same CATH homology
 3H8E A;  4GUA A;  3GQE A;  2AFC A;  1SPV A;  3ETI A;  5D8N A;  4R76 A;  1BPM A;  4JGK A;  1VHU A;  4ABK A;  3H8G A;  2L8R A;  1LCP A;  3Q71 A;  3EWR A;  4GVV A;  3EJG A;  5DUS A;  2FXK A;  1LAM A;  3GPO A;  2ACF A;  1YD9 A;  1NJR A;  4ZX8 A;  4X2T A;  1BLL E;  1HJZ A;  5CBM A;  4J5Q A;  3KZW A;  3SIH A;  5CMS A;  2EEE A;  3SII A;  2FAV A;  2FG1 A;  5FSZ A;  5HIH A;  3SIJ A;  3EKE A;  1GYT A;  2LGR A;  3GQO A;  3EW5 A;  2EWB A;  4JVV A;  1ZR3 A;  3KQZ A;  2BFQ A;  3KQX A;  4J5S A;  4GVW A;  5HOL A;  4ZY2 A;  3EJF A;  3KR5 A;  2XD7 A;  4ZY1 A;  4TU0 A;  3V45 A;  1ZR5 A;  5CB3 A;  5FSX A;  5CB5 A;  4R7M A;  4ZYQ A;  3EWQ A;  4ZI6 A;  4ETJ A;  2BFR A;  5FSU A;  5AIL A;  4ZY0 A;  4KSI A;  3JZT A;  4IQY A;  3V2B A;  5FSY A;  3JRU A;  4J4Z A;  3IJ3 A;  1LAP A;  1BPN A;  3VFQ A;  1TXZ A;  3H8F A;  4ZX9 A;  4ABL A;  1LAN A;  3EWO A;  3IID A;  3SIG A;  2J9A A;  3EWP A;  3PEI A;  2X47 A;  3Q6Z A;  5FSV A;  3T8W A;  4D86 A;  4ESS A;  2DX6 A;  3GPG A;  4J5R A;  4JCA A;  4ETK A;  3KR4 A;  5E3B A;  4K3N A;  4R6T A;  3IIF A;  4UML A;  4JLL A;  3GPQ A;  2VRI A;  1TY8 A;  4K0C A;  4KYB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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