4IQYA

Crystal structure of the human protein-proximal adp-ribosyl-hydrolase macrod2
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
232
structure length
221
Chain Sequence
VWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKNTQEKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFFS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords O-acetyl-ADP-ribose deacetylase MACROD2
publication title A family of macrodomain proteins reverses cellular mono-ADP-ribosylation.
pubmed doi rcsb
source organism Homo sapiens
total genus 74
structure length 221
sequence length 232
chains with identical sequence B
ec nomenclature ec 3.5.1.-:
pdb deposition date 2013-01-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 4iqyA00
5AILA 3EKEA 4KSIA 2AFCA 3Q6ZA 1TY8A 4ZX8A 5E3BA 3H8EA 4GVVA 4ZY2A 4ZY0A 5HOLA 3EWRA 3EWQA 4R76A 4ZYQA 1BLLE 3EWOA 5D8NA 2J9AA 3VFQA 4KYBA 1ZR3A 5DUSA 4ZI6A 3H8FA 2XD7A 2DX6A 5FSXA 3EJFA 4J5SA 4ETJA 1LAMA 3KR5A 3EJGA 3ETIA 4JCAA 2EWBA 2BFQA 4R6TA 2FG1A 3GPQA 3IJ3A 2ACFA 3JZTA 3KZWA 4GUAA 5CBMA 4JLLA 4D86A 4ABLA 1LAPA 3T8WA 4TU0A 5CB5A 3SIGA 3GPOA 5CB3A 3KQZA 2FXKA 1SPVA 3GQEA 3JRUA 1BPNA 1HJZA 4K3NA 2EEEA 3V45A 2VRIA 4X2TA 2L8RA 3KR4A 4GVWA 3V2BA 4JVVA 3IIDA 4UMLA 1LANA 3SIHA 1YD9A 3KQXA 4R7MA 3PEIA 5HIHA 4J4ZA 5FSYA 1ZR5A 1GYTA 4K0CA 4ESSA 3EWPA 4ETKA 1BPMA 4J5QA 5FSZA 2LGRA 5FSUA 4ZX9A 3SIIA 2BFRA 1VHUA 5FSVA 1TXZA 4J5RA 1NJRA 4ABKA 4IQYA 3IIFA 2FAVA 3EW5A 1LCPA 5CMSA 3H8GA 2X47A 3Q71A 4ZY1A 3SIJA 4JGKA 3GQOA 3GPGA
chains in the Genus database with same CATH superfamily
5AILA 3EKEA 4KSIA 2AFCA 3Q6ZA 1TY8A 4ZX8A 5E3BA 3H8EA 4GVVA 4ZY2A 4ZY0A 5HOLA 3EWRA 3EWQA 4R76A 4ZYQA 1BLLE 3EWOA 5D8NA 2J9AA 3VFQA 4KYBA 2KQVA 1ZR3A 5DUSA 4ZI6A 3H8FA 2XD7A 2DX6A 5FSXA 3EJFA 2RNKA 4J5SA 4ETJA 1LAMA 3KR5A 3EJGA 3ETIA 4JCAA 2EWBA 2BFQA 4R6TA 2FG1A 3GPQA 3IJ3A 2ACFA 2W2GA 2JZEA 3JZTA 3KZWA 4GUAA 5CBMA 4JLLA 4D86A 4ABLA 1LAPA 3T8WA 4TU0A 5CB5A 3SIGA 3GPOA 2WCTA 3KQZA 5CB3A 2FXKA 1SPVA 3GQEA 3JRUA 1BPNA 1HJZA 4K3NA 2EEEA 3V45A 2VRIA 4X2TA 2L8RA 3KR4A 4GVWA 3V2BA 4JVVA 3IIDA 4UMLA 1LANA 3SIHA 1YD9A 3KQXA 4R7MA 3PEIA 5HIHA 4J4ZA 5FSYA 1ZR5A 1GYTA 4K0CA 4ESSA 3EWPA 4ETKA 1BPMA 4J5QA 2JZFA 5FSZA 2LGRA 5FSUA 4ZX9A 3SIIA 2JZDA 2BFRA 1VHUA 5FSVA 1TXZA 4J5RA 1NJRA 4ABKA 4IQYA 3IIFA 2FAVA 3EW5A 1LCPA 5CMSA 3H8GA 2X47A 3Q71A 4ZY1A 3SIJA 4JGKA 3GQOA 3GPGA
chains in the Genus database with same CATH topology
5AILA 3EKEA 4KSIA 2AFCA 3Q6ZA 1TY8A 4ZX8A 5E3BA 3H8EA 4GVVA 4ZY2A 4ZY0A 5HOLA 3EWRA 3EWQA 4R76A 4ZYQA 1BLLE 3EWOA 5D8NA 2J9AA 3VFQA 4KYBA 1ZR3A 5DUSA 4ZI6A 3H8FA 2XD7A 2DX6A 5FSXA 3EJFA 4J5SA 4ETJA 1LAMA 3KR5A 3EJGA 3ETIA 4JCAA 2EWBA 2BFQA 4R6TA 2FG1A 3GPQA 3IJ3A 2ACFA 3JZTA 3KZWA 4GUAA 5CBMA 4JLLA 4D86A 4ABLA 1LAPA 3T8WA 4TU0A 5CB5A 3SIGA 3GPOA 5CB3A 3KQZA 2FXKA 1SPVA 3GQEA 3JRUA 1BPNA 1HJZA 4K3NA 2EEEA 3V45A 2VRIA 4X2TA 2L8RA 3KR4A 4GVWA 3V2BA 4JVVA 3IIDA 4UMLA 1LANA 3SIHA 1YD9A 3KQXA 4R7MA 3PEIA 5HIHA 4J4ZA 5FSYA 1ZR5A 1GYTA 4K0CA 4ESSA 3EWPA 4ETKA 1BPMA 4J5QA 5FSZA 2LGRA 5FSUA 4ZX9A 3SIIA 2BFRA 1VHUA 5FSVA 1TXZA 4J5RA 1NJRA 4ABKA 4IQYA 3IIFA 2FAVA 3EW5A 1LCPA 5CMSA 3H8GA 2X47A 3Q71A 4ZY1A 3SIJA 4JGKA 3GQOA 3GPGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5AIL A;  3EKE A;  4KSI A;  2AFC A;  3Q6Z A;  1TY8 A;  4ZX8 A;  5E3B A;  3H8E A;  4GVV A;  4ZY2 A;  4ZY0 A;  5HOL A;  3EWR A;  3EWQ A;  4R76 A;  4ZYQ A;  1BLL E;  3EWO A;  5D8N A;  2J9A A;  3VFQ A;  4KYB A;  1ZR3 A;  5DUS A;  4ZI6 A;  3H8F A;  2XD7 A;  2DX6 A;  5FSX A;  3EJF A;  4J5S A;  4ETJ A;  1LAM A;  3KR5 A;  3EJG A;  3ETI A;  4JCA A;  2EWB A;  2BFQ A;  4R6T A;  2FG1 A;  3GPQ A;  3IJ3 A;  2ACF A;  3JZT A;  3KZW A;  4GUA A;  5CBM A;  4JLL A;  4D86 A;  4ABL A;  1LAP A;  3T8W A;  4TU0 A;  5CB5 A;  3SIG A;  3GPO A;  5CB3 A;  3KQZ A;  2FXK A;  1SPV A;  3GQE A;  3JRU A;  1BPN A;  1HJZ A;  4K3N A;  2EEE A;  3V45 A;  2VRI A;  4X2T A;  2L8R A;  3KR4 A;  4GVW A;  3V2B A;  4JVV A;  3IID A;  4UML A;  1LAN A;  3SIH A;  1YD9 A;  3KQX A;  4R7M A;  3PEI A;  5HIH A;  4J4Z A;  5FSY A;  1ZR5 A;  1GYT A;  4K0C A;  4ESS A;  3EWP A;  4ETK A;  1BPM A;  4J5Q A;  5FSZ A;  2LGR A;  5FSU A;  4ZX9 A;  3SII A;  2BFR A;  1VHU A;  5FSV A;  1TXZ A;  4J5R A;  1NJR A;  4ABK A;  4IQY A;  3IIF A;  2FAV A;  3EW5 A;  1LCP A;  5CMS A;  3H8G A;  2X47 A;  3Q71 A;  4ZY1 A;  3SIJ A;  4JGK A;  3GQO A;  3GPG A; 
#chains in the Genus database with same CATH topology
 5AIL A;  3EKE A;  4KSI A;  2AFC A;  3Q6Z A;  1TY8 A;  4ZX8 A;  5E3B A;  3H8E A;  4GVV A;  4ZY2 A;  4ZY0 A;  5HOL A;  3EWR A;  3EWQ A;  4R76 A;  4ZYQ A;  1BLL E;  3EWO A;  5D8N A;  2J9A A;  3VFQ A;  4KYB A;  2KQV A;  1ZR3 A;  5DUS A;  4ZI6 A;  3H8F A;  2XD7 A;  2DX6 A;  5FSX A;  3EJF A;  2RNK A;  4J5S A;  4ETJ A;  1LAM A;  3KR5 A;  3EJG A;  3ETI A;  4JCA A;  2EWB A;  2BFQ A;  4R6T A;  2FG1 A;  3GPQ A;  3IJ3 A;  2ACF A;  2W2G A;  2JZE A;  3JZT A;  3KZW A;  4GUA A;  5CBM A;  4JLL A;  4D86 A;  4ABL A;  1LAP A;  3T8W A;  4TU0 A;  5CB5 A;  3SIG A;  3GPO A;  2WCT A;  3KQZ A;  5CB3 A;  2FXK A;  1SPV A;  3GQE A;  3JRU A;  1BPN A;  1HJZ A;  4K3N A;  2EEE A;  3V45 A;  2VRI A;  4X2T A;  2L8R A;  3KR4 A;  4GVW A;  3V2B A;  4JVV A;  3IID A;  4UML A;  1LAN A;  3SIH A;  1YD9 A;  3KQX A;  4R7M A;  3PEI A;  5HIH A;  4J4Z A;  5FSY A;  1ZR5 A;  1GYT A;  4K0C A;  4ESS A;  3EWP A;  4ETK A;  1BPM A;  4J5Q A;  2JZF A;  5FSZ A;  2LGR A;  5FSU A;  4ZX9 A;  3SII A;  2JZD A;  2BFR A;  1VHU A;  5FSV A;  1TXZ A;  4J5R A;  1NJR A;  4ABK A;  4IQY A;  3IIF A;  2FAV A;  3EW5 A;  1LCP A;  5CMS A;  3H8G A;  2X47 A;  3Q71 A;  4ZY1 A;  3SIJ A;  4JGK A;  3GQO A;  3GPG A; 
#chains in the Genus database with same CATH homology
 5AIL A;  3EKE A;  4KSI A;  2AFC A;  3Q6Z A;  1TY8 A;  4ZX8 A;  5E3B A;  3H8E A;  4GVV A;  4ZY2 A;  4ZY0 A;  5HOL A;  3EWR A;  3EWQ A;  4R76 A;  4ZYQ A;  1BLL E;  3EWO A;  5D8N A;  2J9A A;  3VFQ A;  4KYB A;  1ZR3 A;  5DUS A;  4ZI6 A;  3H8F A;  2XD7 A;  2DX6 A;  5FSX A;  3EJF A;  4J5S A;  4ETJ A;  1LAM A;  3KR5 A;  3EJG A;  3ETI A;  4JCA A;  2EWB A;  2BFQ A;  4R6T A;  2FG1 A;  3GPQ A;  3IJ3 A;  2ACF A;  3JZT A;  3KZW A;  4GUA A;  5CBM A;  4JLL A;  4D86 A;  4ABL A;  1LAP A;  3T8W A;  4TU0 A;  5CB5 A;  3SIG A;  3GPO A;  5CB3 A;  3KQZ A;  2FXK A;  1SPV A;  3GQE A;  3JRU A;  1BPN A;  1HJZ A;  4K3N A;  2EEE A;  3V45 A;  2VRI A;  4X2T A;  2L8R A;  3KR4 A;  4GVW A;  3V2B A;  4JVV A;  3IID A;  4UML A;  1LAN A;  3SIH A;  1YD9 A;  3KQX A;  4R7M A;  3PEI A;  5HIH A;  4J4Z A;  5FSY A;  1ZR5 A;  1GYT A;  4K0C A;  4ESS A;  3EWP A;  4ETK A;  1BPM A;  4J5Q A;  5FSZ A;  2LGR A;  5FSU A;  4ZX9 A;  3SII A;  2BFR A;  1VHU A;  5FSV A;  1TXZ A;  4J5R A;  1NJR A;  4ABK A;  4IQY A;  3IIF A;  2FAV A;  3EW5 A;  1LCP A;  5CMS A;  3H8G A;  2X47 A;  3Q71 A;  4ZY1 A;  3SIJ A;  4JGK A;  3GQO A;  3GPG A; 
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similar chains in the Genus database (?% sequence similarity)
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