3EWOA

Ibv nsp3 adrp domain
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
177
structure length
177
Chain Sequence
LGSVKPATCEKPKFLEYKTCVGDLAVVIAKALDEFKEFCIVNAANEHMSHGGGVAKAIADFCGPDFVEYCADYVKKHGPQQKLVTPSFVKGIQCVNNVVGPRHGDSNLREKLVAAYKSVLVGGVVNYVVPVLSSGIFGVDFKISIDAMREAFKGCAIRVLLFSLSQEHIDYFDATCK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
pubmed doi rcsb
molecule tags Hydrolase
source organism Avian infectious bronchitis virus
molecule keywords Non-structural protein 3
total genus 51
structure length 177
sequence length 177
chains with identical sequence B
ec nomenclature ec 3.4.22.-:
pdb deposition date 2008-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3ewoA00
1LAMA 5FSXA 1BPMA 4J5QA 4ESSA 4ZX8A 2LGRA 3GQEA 2ACFA 3EJGA 3JRUA 3H8EA 3IIFA 4X2TA 2BFQA 3H8GA 4R7MA 3Q6ZA 3IJ3A 4ETKA 5AILA 1TXZA 1HJZA 4ZI6A 3SIIA 1SPVA 3PEIA 3SIJA 3EW5A 4GUAA 5E3BA 3SIHA 4J5SA 1GYTA 3KR4A 2BFRA 4JGKA 3EKEA 3KQXA 1BPNA 3SIGA 2EWBA 4ZX9A 1LANA 1LCPA 4D86A 5D8NA 2VRIA 4JVVA 5FSVA 3EWQA 5CB5A 4UMLA 5DUSA 2DX6A 3EWPA 5HIHA 4R76A 1VHUA 3GPQA 5CMSA 5FSUA 3V2BA 3T8WA 3EWRA 4KSIA 4ZY1A 3GPGA 3KZWA 1TY8A 2FG1A 2EEEA 3EWOA 2J9AA 3Q71A 2XD7A 4ZY2A 4K3NA 2X47A 1NJRA 5HOLA 3KR5A 4ZYQA 3ETIA 3JZTA 1YD9A 4K0CA 5FSZA 4R6TA 3H8FA 1BLLE 1LAPA 4GVWA 2FAVA 4GVVA 4ABKA 3GPOA 4JCAA 3IIDA 4IQYA 3V45A 4KYBA 5FSYA 4ABLA 5CBMA 5CB3A 4ETJA 4TU0A 3EJFA 4J4ZA 3VFQA 4JLLA 2FXKA 2L8RA 1ZR3A 2AFCA 4J5RA 3GQOA 3KQZA 4ZY0A 1ZR5A
chains in the Genus database with same CATH superfamily
1LAMA 5FSXA 1BPMA 4J5QA 4ESSA 4ZX8A 2LGRA 3GQEA 2ACFA 3EJGA 3JRUA 2KQVA 3H8EA 3IIFA 4X2TA 2BFQA 3H8GA 4R7MA 3Q6ZA 3IJ3A 4ETKA 2JZEA 1TXZA 5AILA 1HJZA 4ZI6A 3SIIA 1SPVA 3PEIA 3SIJA 3EW5A 4GUAA 5E3BA 3SIHA 4J5SA 1GYTA 3KR4A 2BFRA 3EKEA 4JGKA 3KQXA 2JZFA 2RNKA 1BPNA 3SIGA 2EWBA 4ZX9A 1LANA 1LCPA 4D86A 5D8NA 2VRIA 4JVVA 5FSVA 3EWQA 5CB5A 4UMLA 5DUSA 2DX6A 3EWPA 5HIHA 4R76A 1VHUA 3GPQA 5CMSA 5FSUA 3V2BA 3T8WA 2W2GA 3EWRA 4KSIA 4ZY1A 3GPGA 3KZWA 2WCTA 1TY8A 2FG1A 2EEEA 3EWOA 2J9AA 3Q71A 2XD7A 4ZY2A 4K3NA 2X47A 1NJRA 5HOLA 3KR5A 4ZYQA 3ETIA 3JZTA 1YD9A 4K0CA 5FSZA 4R6TA 3H8FA 2JZDA 1BLLE 1LAPA 4GVWA 2FAVA 4GVVA 4ABKA 3GPOA 4JCAA 3IIDA 4IQYA 3V45A 4KYBA 5FSYA 4ABLA 5CBMA 5CB3A 4ETJA 4TU0A 3EJFA 4J4ZA 3VFQA 4JLLA 2FXKA 2L8RA 1ZR3A 2AFCA 4J5RA 3GQOA 3KQZA 4ZY0A 1ZR5A
chains in the Genus database with same CATH topology
1LAMA 5FSXA 1BPMA 4J5QA 4ESSA 4ZX8A 2LGRA 3GQEA 2ACFA 3EJGA 3JRUA 3H8EA 3IIFA 4X2TA 2BFQA 3H8GA 4R7MA 3Q6ZA 3IJ3A 4ETKA 5AILA 1TXZA 1HJZA 4ZI6A 3SIIA 1SPVA 3PEIA 3SIJA 3EW5A 4GUAA 5E3BA 3SIHA 4J5SA 1GYTA 3KR4A 2BFRA 4JGKA 3EKEA 3KQXA 1BPNA 3SIGA 2EWBA 4ZX9A 1LANA 1LCPA 4D86A 5D8NA 2VRIA 4JVVA 5FSVA 3EWQA 5CB5A 4UMLA 5DUSA 2DX6A 3EWPA 5HIHA 4R76A 1VHUA 3GPQA 5CMSA 5FSUA 3V2BA 3T8WA 3EWRA 4KSIA 4ZY1A 3GPGA 3KZWA 1TY8A 2FG1A 2EEEA 3EWOA 2J9AA 3Q71A 2XD7A 4ZY2A 4K3NA 2X47A 1NJRA 5HOLA 3KR5A 4ZYQA 3ETIA 3JZTA 1YD9A 4K0CA 5FSZA 4R6TA 3H8FA 1BLLE 1LAPA 4GVWA 2FAVA 4GVVA 4ABKA 3GPOA 4JCAA 3IIDA 4IQYA 3V45A 4KYBA 5FSYA 4ABLA 5CBMA 5CB3A 4ETJA 4TU0A 3EJFA 4J4ZA 3VFQA 4JLLA 2FXKA 2L8RA 1ZR3A 2AFCA 4J5RA 3GQOA 3KQZA 4ZY0A 1ZR5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LAM A;  5FSX A;  1BPM A;  4J5Q A;  4ESS A;  4ZX8 A;  2LGR A;  3GQE A;  2ACF A;  3EJG A;  3JRU A;  3H8E A;  3IIF A;  4X2T A;  2BFQ A;  3H8G A;  4R7M A;  3Q6Z A;  3IJ3 A;  4ETK A;  5AIL A;  1TXZ A;  1HJZ A;  4ZI6 A;  3SII A;  1SPV A;  3PEI A;  3SIJ A;  3EW5 A;  4GUA A;  5E3B A;  3SIH A;  4J5S A;  1GYT A;  3KR4 A;  2BFR A;  4JGK A;  3EKE A;  3KQX A;  1BPN A;  3SIG A;  2EWB A;  4ZX9 A;  1LAN A;  1LCP A;  4D86 A;  5D8N A;  2VRI A;  4JVV A;  5FSV A;  3EWQ A;  5CB5 A;  4UML A;  5DUS A;  2DX6 A;  3EWP A;  5HIH A;  4R76 A;  1VHU A;  3GPQ A;  5CMS A;  5FSU A;  3V2B A;  3T8W A;  3EWR A;  4KSI A;  4ZY1 A;  3GPG A;  3KZW A;  1TY8 A;  2FG1 A;  2EEE A;  3EWO A;  2J9A A;  3Q71 A;  2XD7 A;  4ZY2 A;  4K3N A;  2X47 A;  1NJR A;  5HOL A;  3KR5 A;  4ZYQ A;  3ETI A;  3JZT A;  1YD9 A;  4K0C A;  5FSZ A;  4R6T A;  3H8F A;  1BLL E;  1LAP A;  4GVW A;  2FAV A;  4GVV A;  4ABK A;  3GPO A;  4JCA A;  3IID A;  4IQY A;  3V45 A;  4KYB A;  5FSY A;  4ABL A;  5CBM A;  5CB3 A;  4ETJ A;  4TU0 A;  3EJF A;  4J4Z A;  3VFQ A;  4JLL A;  2FXK A;  2L8R A;  1ZR3 A;  2AFC A;  4J5R A;  3GQO A;  3KQZ A;  4ZY0 A;  1ZR5 A; 
#chains in the Genus database with same CATH topology
 1LAM A;  5FSX A;  1BPM A;  4J5Q A;  4ESS A;  4ZX8 A;  2LGR A;  3GQE A;  2ACF A;  3EJG A;  3JRU A;  2KQV A;  3H8E A;  3IIF A;  4X2T A;  2BFQ A;  3H8G A;  4R7M A;  3Q6Z A;  3IJ3 A;  4ETK A;  2JZE A;  1TXZ A;  5AIL A;  1HJZ A;  4ZI6 A;  3SII A;  1SPV A;  3PEI A;  3SIJ A;  3EW5 A;  4GUA A;  5E3B A;  3SIH A;  4J5S A;  1GYT A;  3KR4 A;  2BFR A;  3EKE A;  4JGK A;  3KQX A;  2JZF A;  2RNK A;  1BPN A;  3SIG A;  2EWB A;  4ZX9 A;  1LAN A;  1LCP A;  4D86 A;  5D8N A;  2VRI A;  4JVV A;  5FSV A;  3EWQ A;  5CB5 A;  4UML A;  5DUS A;  2DX6 A;  3EWP A;  5HIH A;  4R76 A;  1VHU A;  3GPQ A;  5CMS A;  5FSU A;  3V2B A;  3T8W A;  2W2G A;  3EWR A;  4KSI A;  4ZY1 A;  3GPG A;  3KZW A;  2WCT A;  1TY8 A;  2FG1 A;  2EEE A;  3EWO A;  2J9A A;  3Q71 A;  2XD7 A;  4ZY2 A;  4K3N A;  2X47 A;  1NJR A;  5HOL A;  3KR5 A;  4ZYQ A;  3ETI A;  3JZT A;  1YD9 A;  4K0C A;  5FSZ A;  4R6T A;  3H8F A;  2JZD A;  1BLL E;  1LAP A;  4GVW A;  2FAV A;  4GVV A;  4ABK A;  3GPO A;  4JCA A;  3IID A;  4IQY A;  3V45 A;  4KYB A;  5FSY A;  4ABL A;  5CBM A;  5CB3 A;  4ETJ A;  4TU0 A;  3EJF A;  4J4Z A;  3VFQ A;  4JLL A;  2FXK A;  2L8R A;  1ZR3 A;  2AFC A;  4J5R A;  3GQO A;  3KQZ A;  4ZY0 A;  1ZR5 A; 
#chains in the Genus database with same CATH homology
 1LAM A;  5FSX A;  1BPM A;  4J5Q A;  4ESS A;  4ZX8 A;  2LGR A;  3GQE A;  2ACF A;  3EJG A;  3JRU A;  3H8E A;  3IIF A;  4X2T A;  2BFQ A;  3H8G A;  4R7M A;  3Q6Z A;  3IJ3 A;  4ETK A;  5AIL A;  1TXZ A;  1HJZ A;  4ZI6 A;  3SII A;  1SPV A;  3PEI A;  3SIJ A;  3EW5 A;  4GUA A;  5E3B A;  3SIH A;  4J5S A;  1GYT A;  3KR4 A;  2BFR A;  4JGK A;  3EKE A;  3KQX A;  1BPN A;  3SIG A;  2EWB A;  4ZX9 A;  1LAN A;  1LCP A;  4D86 A;  5D8N A;  2VRI A;  4JVV A;  5FSV A;  3EWQ A;  5CB5 A;  4UML A;  5DUS A;  2DX6 A;  3EWP A;  5HIH A;  4R76 A;  1VHU A;  3GPQ A;  5CMS A;  5FSU A;  3V2B A;  3T8W A;  3EWR A;  4KSI A;  4ZY1 A;  3GPG A;  3KZW A;  1TY8 A;  2FG1 A;  2EEE A;  3EWO A;  2J9A A;  3Q71 A;  2XD7 A;  4ZY2 A;  4K3N A;  2X47 A;  1NJR A;  5HOL A;  3KR5 A;  4ZYQ A;  3ETI A;  3JZT A;  1YD9 A;  4K0C A;  5FSZ A;  4R6T A;  3H8F A;  1BLL E;  1LAP A;  4GVW A;  2FAV A;  4GVV A;  4ABK A;  3GPO A;  4JCA A;  3IID A;  4IQY A;  3V45 A;  4KYB A;  5FSY A;  4ABL A;  5CBM A;  5CB3 A;  4ETJ A;  4TU0 A;  3EJF A;  4J4Z A;  3VFQ A;  4JLL A;  2FXK A;  2L8R A;  1ZR3 A;  2AFC A;  4J5R A;  3GQO A;  3KQZ A;  4ZY0 A;  1ZR5 A; 
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similar chains in the Genus database (?% sequence similarity)
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