4Q3RA

Crystal structure of schistosoma mansoni arginase in complex with inhibitor abhdp
Total Genus 125

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
125
sequence length
345
structure length
335
Chain Sequence
KLLYTSANFLGIPTNRGQPKIGTYQGPELIRKSNFFQLVAEDGIQLTDCGDIIPVELNEAEDPQRFGMKWSRSFSLTTLRIAERVEELMKQSNKSTPLVIVGGDHSMATGTILGHAEAKPDLCVLWIDAHGDINTPLNSASGNMHGMPLSFLVKELQDQIPWLDDFEGIKPCLNASNIAYIGLRDLDAHETHDIRKHGIAYFTMLDVDRMGIEAVIKEALLAVNPRLEKAIHLSFDIDALDPLVAPSTGTAVPGGLTLREGLRICEEVSATGKLSVVELAELNPLLGSQEDVLKTQSSAVHILRACLGHRSGHLPFKVRNLTDQGIMSRAAHMQT
5010015020025030030025020015010050
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV11 (271-274)TI1 (145-148)AH7 (238-250)TVIII1 (19-22)S1 (23-28)AH3 (88-110)AH8 (284-297)O1 (29-31)TIV1 (31-34)AH1 (43-49)AH2 (51-59)TIV2 (32-35)3H1 (40-42)TIV3 (33-36)TI13 (309-312)TIV4 (81-84)3H2 (76-78)S2 (62-68)TI2 (165-168)TI'1 (82-85)AH6 (230-236)S3 (124-127)TI4 (174-177)3H5 (180-182)3H6 (190-192)AH4 (132-144)TIV13 (278-281)S4 (149-153)TI3 (173-176)TVIII2 (154-157)3H3 (162-164)3H4 (170-172)TI7 (182-185)S5 (204-209)TIV7 (193-196)TI8 (192-195)TI9 (200-203)S6 (226-229)S7 (257-262)TIV10 (269-272)TIV9 (267-270)S8 (300-306)TI12 (268-271)TIV5 (85-88)TIV12 (274-277)TI6 (176-179)TI11 (250-253)TIV8 (209-212)AH5 (214-223)3H7 (263-265)AH9 (315-333)Updating...
connected with : NaN
molecule tags Hydrolase/hydrolase inhibitor
source organism Schistosoma mansoni
publication title Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis.
pubmed doi rcsb
molecule keywords Arginase
total genus 125
structure length 335
sequence length 345
chains with identical sequence B
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2014-04-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4q3rA00
4IE1A 5RLAA 3THEA 3PZLA 4RLAA 1XFKA 1GQ6A 3MMRA 4G3HA 1WOIA 2EIVA 4MYFA 4RHJA 1RLAA 1ZPGA 3NIPA 2AEBA 4RHIA 2CEVA 4ITYA 1T4TA 4FCKA 3CEVA 1ZPEA 4GWDA 1T5FA 1TBLA 4IXUA 1P8RA 1WVAA 4MYKA 4Q41A 3E6KA 4Q3TA 1T5GA 3KV2A 4IE2A 2PLLA 3MFVA 3LHLA 3SL1A 3GMZA 1P8NA 4RHLA 3TF3A 3LP4A 4Q3QA 3DJ8A 3NIOA 4RHMA 3NIQA 4Q3SA 1P8PA 4IE3A 5HJ9A 3SL0A 1P8SA 1T4SA 3F80A 3MJLA 3E8ZA 1D3VA 2RLAA 1P8MA 3SKKA 3E8QA 4MYLA 1TBJA 1TBHA 3TH7A 4GSZA 4Q3VA 2A0MA 2PHAA 5HJAA 5CEVA 1HQGA 4I06A 1CEVA 4IU0A 3E9BA 4Q3UA 1HQFA 4HWWA 4Q3RA 1HQHA 3E6VA 1TA1A 4IXVA 2PHOA 4GSMA 1HQ5A 1HQXA 1PQ3A 1T4RA 4RHQA 1GQ7A 4Q42A 1R1OA 1WOHA 4RHKA 1P8OA 4IU5A 2EF5A 4Q3RC 3RLAA 4CEVA 3THJA 1T4PA 4DZ4A 3GN0A 2EF4A 4Q40A 1WVBA 4MXRA 2ZAVA 4IU1A 4HXQA 4GSVA 3LP7A 4HZEA 4IU4A 3THHA 1WOGA 3MFWA 3M1RA 4GWCA 1P8QA 4MYNA 3SJTA 4Q3PA 4FCIA
chains in the Genus database with same CATH superfamily
4IE1A 5RLAA 3MZ4A 5G1CA 3THEA 3PZLA 5IX0A 4RLAA 1XFKA 5EFJD 3EZPA 1GQ6A 4ZUQA 3MMRA 5EF8A 4G3HA 1WOIA 2EIVA 4QA6A 4MYFA 3EW8A 4RHJA 5G1BA 1RLAA 1ZPGA 3NIPA 2AEBA 4RHIA 2CEVA 5EFNA 4ITYA 1T4TA 4FCKA 3CEVA 1ZPEA 4GWDA 1T5FA 1TBLA 1W22A 4BZ5A 4IXUA 1P8RA 3Q9BA 3MENA 1WVAA 4MYKA 4Q41A 3E6KA 4Q3TA 4QA2A 5LI3A 1T5GA 5G0XA 3KV2A 3MZ7A 4IE2A 4QA3A 2PLLA 5EEIA 5G10A 1C3RA 3MFVA 3LHLA 3SL1A 4LXZA 3GMZA 1P8NA 4RHLA 1VKGA 5G0HA 5G13A 3Q9CA 3TF3A 4QA1A 5G3WA 3LP4A 5FCWA 4CBYA 5JI5A 2V5WA 4Q3QA 3DJ8A 5EF7A 2VQJA 1C3SA 2V5XA 3NIOA 3ZNRA 3F07A 5A2SA 4QA7A 4RHMA 5EFKB 3NIQA 3MAXA 3ZNSA 4Q3SA 1P8PA 4BZ8A 4IE3A 4QA5A 4CBTA 5HJ9A 3SL0A 1P8SA 1T4SA 3F80A 5THTA 3EWFA 3MJLA 5G0GA 3E8ZA 4RN0A 2RLAA 1P8MA 3SKKA 3MZ6A 3C10A 4ZUPA 3E8QA 3SFHA 4MYLA 1TBJA 4A69A 5FUEA 1TBHA 4ZUNA 3TH7A 1T67A 5G12A 5D1BA 5THSA 4BZ9A 5ICNB 3EZTA 4GSZA 5DC5A 5G0IA 4Q3VA 2A0MA 2GH6A 2PHAA 5EFBD 5HJAA 5CEVA 1HQGA 2VQOA 5IWGA 3C0YA 4I06A 4BZ7A 1CEVA 4IU0A 2VQVA 5EEKA 3E9BA 4Q3UA 3SFFA 1HQFA 1ZZ0A 4HWWA 1HQHA 4Q3RA 5EENA 5D1CA 5G0YA 5D1DA 3E6VA 4QA4A 1TA1A 1ZZ1A 3F0RA 4BZ6A 2VQQA 2VCGA 4IXVA 1C3PA 2PHOA 4ZURA 2VQWG 5G0JA 4GSMA 1HQ5A 4RN2A 1HQXA 1PQ3A 5EFGA 1T4RA 4RHQA 1GQ7A 4Q42A 1R1OA 5G1AA 1WOHA 4RHKA 1P8OA 4IU5A 2EF5A 4Q3RC 3F06A 3RLAA 1T69A 4CEVA 3MZ3A 2VQMA 3THJA 3C0ZA 3RQDA 1T4PA 5DC7A 5DC6A 4ZUOA 4BKXB 3Q9EA 1T64A 5G17A 5THUA 4FCIA 4CQFA 3GN0A 4DZ4A 2EF4A 4LY1A 5THVA 4Q40A 1WVBA 4MXRA 5EEMA 5BWZA 4ZUMA 3Q9FA 2ZAVA 4IU1A 4HXQA 5EFHA 4GSVA 3LP7A 5DC8A 1ZZ3A 4HZEA 4IU4A 3THHA 1WOGA 3MFWA 3M1RA 5G11A 4GWCA 1P8QA 4MYNA 4QA0A 4RN1A 5EEFA 3SJTA 4Q3PA 1D3VA
chains in the Genus database with same CATH topology
4IE1A 5RLAA 3THEA 3PZLA 4RLAA 1XFKA 1GQ6A 3MMRA 4G3HA 1WOIA 2EIVA 4MYFA 4RHJA 1RLAA 1ZPGA 3NIPA 2AEBA 4RHIA 2CEVA 4ITYA 1T4TA 4FCKA 3CEVA 1ZPEA 4GWDA 1T5FA 1TBLA 4IXUA 1P8RA 1WVAA 4MYKA 4Q41A 3E6KA 4Q3TA 1T5GA 3KV2A 4IE2A 2PLLA 3MFVA 3LHLA 3SL1A 3GMZA 1P8NA 4RHLA 3TF3A 3LP4A 4Q3QA 3DJ8A 3NIOA 4RHMA 3NIQA 4Q3SA 1P8PA 4IE3A 5HJ9A 3SL0A 1P8SA 1T4SA 3F80A 3MJLA 3E8ZA 1D3VA 2RLAA 1P8MA 3SKKA 3E8QA 4MYLA 1TBJA 1TBHA 3TH7A 4GSZA 4Q3VA 2A0MA 2PHAA 5HJAA 5CEVA 1HQGA 4I06A 1CEVA 4IU0A 3E9BA 4Q3UA 1HQFA 4HWWA 4Q3RA 1HQHA 3E6VA 1TA1A 4IXVA 2PHOA 4GSMA 1HQ5A 1HQXA 1PQ3A 1T4RA 4RHQA 1GQ7A 4Q42A 1R1OA 1WOHA 4RHKA 1P8OA 4IU5A 2EF5A 4Q3RC 3RLAA 4CEVA 3THJA 1T4PA 4DZ4A 3GN0A 2EF4A 4Q40A 1WVBA 4MXRA 2ZAVA 4IU1A 4HXQA 4GSVA 3LP7A 4HZEA 4IU4A 3THHA 1WOGA 3MFWA 3M1RA 4GWCA 1P8QA 4MYNA 3SJTA 4Q3PA 4FCIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IE1 A;  5RLA A;  3THE A;  3PZL A;  4RLA A;  1XFK A;  1GQ6 A;  3MMR A;  4G3H A;  1WOI A;  2EIV A;  4MYF A;  4RHJ A;  1RLA A;  1ZPG A;  3NIP A;  2AEB A;  4RHI A;  2CEV A;  4ITY A;  1T4T A;  4FCK A;  3CEV A;  1ZPE A;  4GWD A;  1T5F A;  1TBL A;  4IXU A;  1P8R A;  1WVA A;  4MYK A;  4Q41 A;  3E6K A;  4Q3T A;  1T5G A;  3KV2 A;  4IE2 A;  2PLL A;  3MFV A;  3LHL A;  3SL1 A;  3GMZ A;  1P8N A;  4RHL A;  3TF3 A;  3LP4 A;  4Q3Q A;  3DJ8 A;  3NIO A;  4RHM A;  3NIQ A;  4Q3S A;  1P8P A;  4IE3 A;  5HJ9 A;  3SL0 A;  1P8S A;  1T4S A;  3F80 A;  3MJL A;  3E8Z A;  1D3V A;  2RLA A;  1P8M A;  3SKK A;  3E8Q A;  4MYL A;  1TBJ A;  1TBH A;  3TH7 A;  4GSZ A;  4Q3V A;  2A0M A;  2PHA A;  5HJA A;  5CEV A;  1HQG A;  4I06 A;  1CEV A;  4IU0 A;  3E9B A;  4Q3U A;  1HQF A;  4HWW A;  4Q3R A;  1HQH A;  3E6V A;  1TA1 A;  4IXV A;  2PHO A;  4GSM A;  1HQ5 A;  1HQX A;  1PQ3 A;  1T4R A;  4RHQ A;  1GQ7 A;  4Q42 A;  1R1O A;  1WOH A;  4RHK A;  1P8O A;  4IU5 A;  2EF5 A;  4Q3R C;  3RLA A;  4CEV A;  3THJ A;  1T4P A;  4DZ4 A;  3GN0 A;  2EF4 A;  4Q40 A;  1WVB A;  4MXR A;  2ZAV A;  4IU1 A;  4HXQ A;  4GSV A;  3LP7 A;  4HZE A;  4IU4 A;  3THH A;  1WOG A;  3MFW A;  3M1R A;  4GWC A;  1P8Q A;  4MYN A;  3SJT A;  4Q3P A;  4FCI A; 
#chains in the Genus database with same CATH topology
 4IE1 A;  5RLA A;  3MZ4 A;  5G1C A;  3THE A;  3PZL A;  5IX0 A;  4RLA A;  1XFK A;  5EFJ D;  3EZP A;  1GQ6 A;  4ZUQ A;  3MMR A;  5EF8 A;  4G3H A;  1WOI A;  2EIV A;  4QA6 A;  4MYF A;  3EW8 A;  4RHJ A;  5G1B A;  1RLA A;  1ZPG A;  3NIP A;  2AEB A;  4RHI A;  2CEV A;  5EFN A;  4ITY A;  1T4T A;  4FCK A;  3CEV A;  1ZPE A;  4GWD A;  1T5F A;  1TBL A;  1W22 A;  4BZ5 A;  4IXU A;  1P8R A;  3Q9B A;  3MEN A;  1WVA A;  4MYK A;  4Q41 A;  3E6K A;  4Q3T A;  4QA2 A;  5LI3 A;  1T5G A;  5G0X A;  3KV2 A;  3MZ7 A;  4IE2 A;  4QA3 A;  2PLL A;  5EEI A;  5G10 A;  1C3R A;  3MFV A;  3LHL A;  3SL1 A;  4LXZ A;  3GMZ A;  1P8N A;  4RHL A;  1VKG A;  5G0H A;  5G13 A;  3Q9C A;  3TF3 A;  4QA1 A;  5G3W A;  3LP4 A;  5FCW A;  4CBY A;  5JI5 A;  2V5W A;  4Q3Q A;  3DJ8 A;  5EF7 A;  2VQJ A;  1C3S A;  2V5X A;  3NIO A;  3ZNR A;  3F07 A;  5A2S A;  4QA7 A;  4RHM A;  5EFK B;  3NIQ A;  3MAX A;  3ZNS A;  4Q3S A;  1P8P A;  4BZ8 A;  4IE3 A;  4QA5 A;  4CBT A;  5HJ9 A;  3SL0 A;  1P8S A;  1T4S A;  3F80 A;  5THT A;  3EWF A;  3MJL A;  5G0G A;  3E8Z A;  4RN0 A;  2RLA A;  1P8M A;  3SKK A;  3MZ6 A;  3C10 A;  4ZUP A;  3E8Q A;  3SFH A;  4MYL A;  1TBJ A;  4A69 A;  5FUE A;  1TBH A;  4ZUN A;  3TH7 A;  1T67 A;  5G12 A;  5D1B A;  5THS A;  4BZ9 A;  5ICN B;  3EZT A;  4GSZ A;  5DC5 A;  5G0I A;  4Q3V A;  2A0M A;  2GH6 A;  2PHA A;  5EFB D;  5HJA A;  5CEV A;  1HQG A;  2VQO A;  5IWG A;  3C0Y A;  4I06 A;  4BZ7 A;  1CEV A;  4IU0 A;  2VQV A;  5EEK A;  3E9B A;  4Q3U A;  3SFF A;  1HQF A;  1ZZ0 A;  4HWW A;  1HQH A;  4Q3R A;  5EEN A;  5D1C A;  5G0Y A;  5D1D A;  3E6V A;  4QA4 A;  1TA1 A;  1ZZ1 A;  3F0R A;  4BZ6 A;  2VQQ A;  2VCG A;  4IXV A;  1C3P A;  2PHO A;  4ZUR A;  2VQW G;  5G0J A;  4GSM A;  1HQ5 A;  4RN2 A;  1HQX A;  1PQ3 A;  5EFG A;  1T4R A;  4RHQ A;  1GQ7 A;  4Q42 A;  1R1O A;  5G1A A;  1WOH A;  4RHK A;  1P8O A;  4IU5 A;  2EF5 A;  4Q3R C;  3F06 A;  3RLA A;  1T69 A;  4CEV A;  3MZ3 A;  2VQM A;  3THJ A;  3C0Z A;  3RQD A;  1T4P A;  5DC7 A;  5DC6 A;  4ZUO A;  4BKX B;  3Q9E A;  1T64 A;  5G17 A;  5THU A;  4FCI A;  4CQF A;  3GN0 A;  4DZ4 A;  2EF4 A;  4LY1 A;  5THV A;  4Q40 A;  1WVB A;  4MXR A;  5EEM A;  5BWZ A;  4ZUM A;  3Q9F A;  2ZAV A;  4IU1 A;  4HXQ A;  5EFH A;  4GSV A;  3LP7 A;  5DC8 A;  1ZZ3 A;  4HZE A;  4IU4 A;  3THH A;  1WOG A;  3MFW A;  3M1R A;  5G11 A;  4GWC A;  1P8Q A;  4MYN A;  4QA0 A;  4RN1 A;  5EEF A;  3SJT A;  4Q3P A;  1D3V A; 
#chains in the Genus database with same CATH homology
 4IE1 A;  5RLA A;  3THE A;  3PZL A;  4RLA A;  1XFK A;  1GQ6 A;  3MMR A;  4G3H A;  1WOI A;  2EIV A;  4MYF A;  4RHJ A;  1RLA A;  1ZPG A;  3NIP A;  2AEB A;  4RHI A;  2CEV A;  4ITY A;  1T4T A;  4FCK A;  3CEV A;  1ZPE A;  4GWD A;  1T5F A;  1TBL A;  4IXU A;  1P8R A;  1WVA A;  4MYK A;  4Q41 A;  3E6K A;  4Q3T A;  1T5G A;  3KV2 A;  4IE2 A;  2PLL A;  3MFV A;  3LHL A;  3SL1 A;  3GMZ A;  1P8N A;  4RHL A;  3TF3 A;  3LP4 A;  4Q3Q A;  3DJ8 A;  3NIO A;  4RHM A;  3NIQ A;  4Q3S A;  1P8P A;  4IE3 A;  5HJ9 A;  3SL0 A;  1P8S A;  1T4S A;  3F80 A;  3MJL A;  3E8Z A;  1D3V A;  2RLA A;  1P8M A;  3SKK A;  3E8Q A;  4MYL A;  1TBJ A;  1TBH A;  3TH7 A;  4GSZ A;  4Q3V A;  2A0M A;  2PHA A;  5HJA A;  5CEV A;  1HQG A;  4I06 A;  1CEV A;  4IU0 A;  3E9B A;  4Q3U A;  1HQF A;  4HWW A;  4Q3R A;  1HQH A;  3E6V A;  1TA1 A;  4IXV A;  2PHO A;  4GSM A;  1HQ5 A;  1HQX A;  1PQ3 A;  1T4R A;  4RHQ A;  1GQ7 A;  4Q42 A;  1R1O A;  1WOH A;  4RHK A;  1P8O A;  4IU5 A;  2EF5 A;  4Q3R C;  3RLA A;  4CEV A;  3THJ A;  1T4P A;  4DZ4 A;  3GN0 A;  2EF4 A;  4Q40 A;  1WVB A;  4MXR A;  2ZAV A;  4IU1 A;  4HXQ A;  4GSV A;  3LP7 A;  4HZE A;  4IU4 A;  3THH A;  1WOG A;  3MFW A;  3M1R A;  4GWC A;  1P8Q A;  4MYN A;  3SJT A;  4Q3P A;  4FCI A; 
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