4Q3TA

Crystal structure of schistosoma mansoni arginase in complex with inhibitor noha
Total Genus 127

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
127
sequence length
345
structure length
336
Chain Sequence
PKLLYTSANFLGIPTNRGQPKIGTYQGPELIRKSNFFQLVAEDGIQLTDCGDIIPVELNEAEDPQRFGMKWSRSFSLTTLRIAERVEELMKQSNKSTPLVIVGGDHSMATGTILGHAEAKPDLCVLWIDAHGDINTPLNSASGNMHGMPLSFLVKELQDQIPWLDDFEGIKPCLNASNIAYIGLRDLDAHETHDIRKHGIAYFTMLDVDRMGIEAVIKEALLAVNPRLEKAIHLSFDIDALDPLVAPSTGTAVPGGLTLREGLRICEEVSATGKLSVVELAELNPLLGSQEDVLKTQSSAVHILRACLGHCRSGHLPFKVRNLTDQGIMSRAAHMQ
5010015020025030030025020015010050
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTVIII1 (19-22)S1 (23-28)AH7 (238-250)AH8 (284-297)AH3 (88-109)TIV1 (31-34)AH1 (43-49)TIV3 (33-36)TIV2 (32-35)3H1 (40-42)TI17 (309-312)AH2 (51-59)TI'1 (82-85)TIV4 (81-84)3H2 (76-78)S2 (62-68)TI4 (165-168)TIV9 (274-277)AH6 (230-236)TIV10 (278-281)S3 (124-127)TI7 (175-178)3H4 (180-182)TI10 (183-186)AH4 (132-144)3H5 (190-192)TI1 (145-148)S4 (149-153)TVIII2 (154-157)TI5 (173-176)3H3 (170-172)TI2 (161-164)TI3 (162-165)TI9 (182-185)TI12 (200-203)S5 (204-209)TI14 (250-253)TIV6 (193-196)TI11 (192-195)AH5 (214-223)TIV7 (209-212)3H6 (263-265)S6 (226-229)S7 (257-262)TI15 (267-270)TI16 (268-271)TIV8 (269-272)O1 (272-274)AH9 (315-333)TIV5 (85-88)S8 (300-306)TI18 (336-339)Updating...
connected with : NaN
molecule tags Hydrolase/hydrolase inhibitor
source organism Schistosoma mansoni
publication title Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis.
pubmed doi rcsb
molecule keywords Arginase
total genus 127
structure length 336
sequence length 345
chains with identical sequence B, C, D
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2014-04-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4q3tA00
2AEBA 1WOGA 3SJTA 1ZPGA 4MYFA 3TH7A 2EIVA 4GSVA 5HJ9A 4RLAA 4Q3RA 1T4SA 3F80A 3SKKA 4FCIA 1T5GA 1HQFA 1T4RA 4Q3SA 1CEVA 3NIPA 4IXVA 1D3VA 4Q42A 1HQHA 1HQXA 1WOIA 3E9BA 3GN0A 1T4TA 1HQ5A 1TA1A 3LHLA 1R1OA 4Q40A 4CEVA 1P8RA 1TBLA 1GQ7A 4IE3A 5CEVA 1WVBA 3E6KA 1TBHA 4G3HA 1WOHA 5HJAA 3M1RA 3CEVA 4IU0A 1T4PA 1WVAA 3MMRA 3E8ZA 3E6VA 1HQGA 3NIQA 1P8PA 1P8SA 3LP7A 4IE2A 4RHIA 4IE1A 4MYLA 1P8MA 4I06A 4RHMA 2CEVA 2ZAVA 3KV2A 4IU1A 2PHOA 4Q3UA 3SL1A 2EF5A 4IU4A 4MYNA 3SL0A 4Q41A 3TF3A 1XFKA 1TBJA 2RLAA 4IXUA 2EF4A 2A0MA 4RHLA 1P8QA 3RLAA 4DZ4A 4GSMA 1T5FA 4Q3RC 4MYKA 3PZLA 3LP4A 2PHAA 4RHJA 5RLAA 4FCKA 4GWDA 4HWWA 3DJ8A 1ZPEA 4Q3QA 2PLLA 3MFVA 1PQ3A 3MFWA 1P8NA 4IU5A 4ITYA 4Q3PA 4Q3TA 3GMZA 4Q3VA 1P8OA 4MXRA 4RHQA 1GQ6A 4GSZA 4GWCA 1RLAA 3E8QA 3MJLA 3NIOA 3THJA 4HXQA 4HZEA 4RHKA 3THHA 3THEA
chains in the Genus database with same CATH superfamily
2VCGA 5G1CA 4RN0A 2AEBA 1WOGA 5THSA 3SJTA 1ZPGA 4MYFA 1C3RA 3TH7A 2EIVA 5G0HA 4GSVA 5HJ9A 4RLAA 4Q3RA 3F07A 1T4SA 3F80A 3SKKA 1W22A 4FCIA 4CBTA 5EF7A 1T5GA 5G10A 2VQVA 1HQFA 1T4RA 4Q3SA 1CEVA 1ZZ1A 3NIPA 4IXVA 4QA4A 5G0XA 1D3VA 4Q42A 1HQHA 1HQXA 3SFFA 1C3SA 1WOIA 3E9BA 3GN0A 5G3WA 4ZUPA 1T4TA 1HQ5A 1TA1A 3LHLA 5EFBD 1R1OA 4ZURA 4Q40A 4QA5A 4CEVA 5G0IA 1P8RA 1TBLA 1GQ7A 4IE3A 1T67A 4CQFA 5CEVA 1WVBA 3E6KA 1TBHA 1WOHA 4G3HA 5HJAA 3MZ4A 3Q9FA 3EZPA 5EEMA 4RN2A 5G12A 4BZ8A 3M1RA 3CEVA 4IU0A 4QA6A 1T4PA 1WVAA 5EEFA 4LXZA 3MMRA 1ZZ0A 1ZZ3A 2VQOA 5D1BA 3E8ZA 3E6VA 3MAXA 1HQGA 3NIQA 4ZUNA 5FUEA 1P8PA 3Q9BA 5EEIA 1P8SA 3LP7A 4IE2A 4RHIA 4IE1A 3ZNSA 3Q9EA 5DC6A 4MYLA 5G13A 5A2SA 3EW8A 1P8MA 5EFNA 3MZ7A 5D1CA 4I06A 4LY1A 4QA7A 4ZUMA 4QA3A 3RQDA 3F0RA 4RHMA 2CEVA 2ZAVA 5EFHA 3KV2A 4IU1A 5THTA 2PHOA 4Q3UA 2V5XA 4RN1A 2VQMA 4ZUQA 2V5WA 3SL1A 4BZ6A 2EF5A 4IU4A 4BZ9A 3MZ3A 4MYNA 3SL0A 4Q41A 3TF3A 1XFKA 1VKGA 1T69A 1TBJA 1C3PA 2RLAA 4IXUA 2EF4A 3Q9CA 5D1DA 5DC7A 5EFKB 5G1AA 2VQQA 5JI5A 2A0MA 5G11A 4RHLA 1P8QA 3EWFA 3RLAA 5EENA 3C0ZA 4A69A 5IX0A 3MENA 4GSMA 4DZ4A 1T64A 1T5FA 3F06A 4Q3RC 5FCWA 4MYKA 5G0JA 3C10A 4QA2A 5EF8A 3PZLA 3LP4A 5G17A 2PHAA 5ICNB 4RHJA 4BZ7A 2VQJA 3MZ6A 5DC5A 3ZNRA 3SFHA 5RLAA 4FCKA 3C0YA 5IWGA 4GWDA 5G0GA 4HWWA 5THVA 3DJ8A 1ZPEA 5THUA 4Q3QA 2PLLA 3MFVA 1PQ3A 3MFWA 1P8NA 5EEKA 4IU5A 4ITYA 2GH6A 5DC8A 5EFGA 4Q3PA 4Q3TA 3GMZA 4Q3VA 5EFJD 1P8OA 4MXRA 3EZTA 4RHQA 5G0YA 1GQ6A 4GSZA 4CBYA 4GWCA 1RLAA 3E8QA 4BKXB 4BZ5A 5BWZA 4QA1A 3MJLA 3NIOA 5G1BA 4HXQA 3THJA 4ZUOA 2VQWG 4HZEA 4RHKA 5LI3A 4QA0A 3THHA 3THEA
chains in the Genus database with same CATH topology
2AEBA 1WOGA 3SJTA 1ZPGA 4MYFA 3TH7A 2EIVA 4GSVA 5HJ9A 4RLAA 4Q3RA 1T4SA 3F80A 3SKKA 4FCIA 1T5GA 1HQFA 1T4RA 4Q3SA 1CEVA 3NIPA 4IXVA 1D3VA 4Q42A 1HQHA 1HQXA 1WOIA 3E9BA 3GN0A 1T4TA 1HQ5A 1TA1A 3LHLA 1R1OA 4Q40A 4CEVA 1P8RA 1TBLA 1GQ7A 4IE3A 5CEVA 1WVBA 3E6KA 1TBHA 4G3HA 1WOHA 5HJAA 3M1RA 3CEVA 4IU0A 1T4PA 1WVAA 3MMRA 3E8ZA 3E6VA 1HQGA 3NIQA 1P8PA 1P8SA 3LP7A 4IE2A 4RHIA 4IE1A 4MYLA 1P8MA 4I06A 4RHMA 2CEVA 2ZAVA 3KV2A 4IU1A 2PHOA 4Q3UA 3SL1A 2EF5A 4IU4A 4MYNA 3SL0A 4Q41A 3TF3A 1XFKA 1TBJA 2RLAA 4IXUA 2EF4A 2A0MA 4RHLA 1P8QA 3RLAA 4DZ4A 4GSMA 1T5FA 4Q3RC 4MYKA 3PZLA 3LP4A 2PHAA 4RHJA 5RLAA 4FCKA 4GWDA 4HWWA 3DJ8A 1ZPEA 4Q3QA 2PLLA 3MFVA 1PQ3A 3MFWA 1P8NA 4IU5A 4ITYA 4Q3PA 4Q3TA 3GMZA 4Q3VA 1P8OA 4MXRA 4RHQA 1GQ6A 4GSZA 4GWCA 1RLAA 3E8QA 3MJLA 3NIOA 3THJA 4HXQA 4HZEA 4RHKA 3THHA 3THEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AEB A;  1WOG A;  3SJT A;  1ZPG A;  4MYF A;  3TH7 A;  2EIV A;  4GSV A;  5HJ9 A;  4RLA A;  4Q3R A;  1T4S A;  3F80 A;  3SKK A;  4FCI A;  1T5G A;  1HQF A;  1T4R A;  4Q3S A;  1CEV A;  3NIP A;  4IXV A;  1D3V A;  4Q42 A;  1HQH A;  1HQX A;  1WOI A;  3E9B A;  3GN0 A;  1T4T A;  1HQ5 A;  1TA1 A;  3LHL A;  1R1O A;  4Q40 A;  4CEV A;  1P8R A;  1TBL A;  1GQ7 A;  4IE3 A;  5CEV A;  1WVB A;  3E6K A;  1TBH A;  4G3H A;  1WOH A;  5HJA A;  3M1R A;  3CEV A;  4IU0 A;  1T4P A;  1WVA A;  3MMR A;  3E8Z A;  3E6V A;  1HQG A;  3NIQ A;  1P8P A;  1P8S A;  3LP7 A;  4IE2 A;  4RHI A;  4IE1 A;  4MYL A;  1P8M A;  4I06 A;  4RHM A;  2CEV A;  2ZAV A;  3KV2 A;  4IU1 A;  2PHO A;  4Q3U A;  3SL1 A;  2EF5 A;  4IU4 A;  4MYN A;  3SL0 A;  4Q41 A;  3TF3 A;  1XFK A;  1TBJ A;  2RLA A;  4IXU A;  2EF4 A;  2A0M A;  4RHL A;  1P8Q A;  3RLA A;  4DZ4 A;  4GSM A;  1T5F A;  4Q3R C;  4MYK A;  3PZL A;  3LP4 A;  2PHA A;  4RHJ A;  5RLA A;  4FCK A;  4GWD A;  4HWW A;  3DJ8 A;  1ZPE A;  4Q3Q A;  2PLL A;  3MFV A;  1PQ3 A;  3MFW A;  1P8N A;  4IU5 A;  4ITY A;  4Q3P A;  4Q3T A;  3GMZ A;  4Q3V A;  1P8O A;  4MXR A;  4RHQ A;  1GQ6 A;  4GSZ A;  4GWC A;  1RLA A;  3E8Q A;  3MJL A;  3NIO A;  3THJ A;  4HXQ A;  4HZE A;  4RHK A;  3THH A;  3THE A; 
#chains in the Genus database with same CATH topology
 2VCG A;  5G1C A;  4RN0 A;  2AEB A;  1WOG A;  5THS A;  3SJT A;  1ZPG A;  4MYF A;  1C3R A;  3TH7 A;  2EIV A;  5G0H A;  4GSV A;  5HJ9 A;  4RLA A;  4Q3R A;  3F07 A;  1T4S A;  3F80 A;  3SKK A;  1W22 A;  4FCI A;  4CBT A;  5EF7 A;  1T5G A;  5G10 A;  2VQV A;  1HQF A;  1T4R A;  4Q3S A;  1CEV A;  1ZZ1 A;  3NIP A;  4IXV A;  4QA4 A;  5G0X A;  1D3V A;  4Q42 A;  1HQH A;  1HQX A;  3SFF A;  1C3S A;  1WOI A;  3E9B A;  3GN0 A;  5G3W A;  4ZUP A;  1T4T A;  1HQ5 A;  1TA1 A;  3LHL A;  5EFB D;  1R1O A;  4ZUR A;  4Q40 A;  4QA5 A;  4CEV A;  5G0I A;  1P8R A;  1TBL A;  1GQ7 A;  4IE3 A;  1T67 A;  4CQF A;  5CEV A;  1WVB A;  3E6K A;  1TBH A;  1WOH A;  4G3H A;  5HJA A;  3MZ4 A;  3Q9F A;  3EZP A;  5EEM A;  4RN2 A;  5G12 A;  4BZ8 A;  3M1R A;  3CEV A;  4IU0 A;  4QA6 A;  1T4P A;  1WVA A;  5EEF A;  4LXZ A;  3MMR A;  1ZZ0 A;  1ZZ3 A;  2VQO A;  5D1B A;  3E8Z A;  3E6V A;  3MAX A;  1HQG A;  3NIQ A;  4ZUN A;  5FUE A;  1P8P A;  3Q9B A;  5EEI A;  1P8S A;  3LP7 A;  4IE2 A;  4RHI A;  4IE1 A;  3ZNS A;  3Q9E A;  5DC6 A;  4MYL A;  5G13 A;  5A2S A;  3EW8 A;  1P8M A;  5EFN A;  3MZ7 A;  5D1C A;  4I06 A;  4LY1 A;  4QA7 A;  4ZUM A;  4QA3 A;  3RQD A;  3F0R A;  4RHM A;  2CEV A;  2ZAV A;  5EFH A;  3KV2 A;  4IU1 A;  5THT A;  2PHO A;  4Q3U A;  2V5X A;  4RN1 A;  2VQM A;  4ZUQ A;  2V5W A;  3SL1 A;  4BZ6 A;  2EF5 A;  4IU4 A;  4BZ9 A;  3MZ3 A;  4MYN A;  3SL0 A;  4Q41 A;  3TF3 A;  1XFK A;  1VKG A;  1T69 A;  1TBJ A;  1C3P A;  2RLA A;  4IXU A;  2EF4 A;  3Q9C A;  5D1D A;  5DC7 A;  5EFK B;  5G1A A;  2VQQ A;  5JI5 A;  2A0M A;  5G11 A;  4RHL A;  1P8Q A;  3EWF A;  3RLA A;  5EEN A;  3C0Z A;  4A69 A;  5IX0 A;  3MEN A;  4GSM A;  4DZ4 A;  1T64 A;  1T5F A;  3F06 A;  4Q3R C;  5FCW A;  4MYK A;  5G0J A;  3C10 A;  4QA2 A;  5EF8 A;  3PZL A;  3LP4 A;  5G17 A;  2PHA A;  5ICN B;  4RHJ A;  4BZ7 A;  2VQJ A;  3MZ6 A;  5DC5 A;  3ZNR A;  3SFH A;  5RLA A;  4FCK A;  3C0Y A;  5IWG A;  4GWD A;  5G0G A;  4HWW A;  5THV A;  3DJ8 A;  1ZPE A;  5THU A;  4Q3Q A;  2PLL A;  3MFV A;  1PQ3 A;  3MFW A;  1P8N A;  5EEK A;  4IU5 A;  4ITY A;  2GH6 A;  5DC8 A;  5EFG A;  4Q3P A;  4Q3T A;  3GMZ A;  4Q3V A;  5EFJ D;  1P8O A;  4MXR A;  3EZT A;  4RHQ A;  5G0Y A;  1GQ6 A;  4GSZ A;  4CBY A;  4GWC A;  1RLA A;  3E8Q A;  4BKX B;  4BZ5 A;  5BWZ A;  4QA1 A;  3MJL A;  3NIO A;  5G1B A;  4HXQ A;  3THJ A;  4ZUO A;  2VQW G;  4HZE A;  4RHK A;  5LI3 A;  4QA0 A;  3THH A;  3THE A; 
#chains in the Genus database with same CATH homology
 2AEB A;  1WOG A;  3SJT A;  1ZPG A;  4MYF A;  3TH7 A;  2EIV A;  4GSV A;  5HJ9 A;  4RLA A;  4Q3R A;  1T4S A;  3F80 A;  3SKK A;  4FCI A;  1T5G A;  1HQF A;  1T4R A;  4Q3S A;  1CEV A;  3NIP A;  4IXV A;  1D3V A;  4Q42 A;  1HQH A;  1HQX A;  1WOI A;  3E9B A;  3GN0 A;  1T4T A;  1HQ5 A;  1TA1 A;  3LHL A;  1R1O A;  4Q40 A;  4CEV A;  1P8R A;  1TBL A;  1GQ7 A;  4IE3 A;  5CEV A;  1WVB A;  3E6K A;  1TBH A;  4G3H A;  1WOH A;  5HJA A;  3M1R A;  3CEV A;  4IU0 A;  1T4P A;  1WVA A;  3MMR A;  3E8Z A;  3E6V A;  1HQG A;  3NIQ A;  1P8P A;  1P8S A;  3LP7 A;  4IE2 A;  4RHI A;  4IE1 A;  4MYL A;  1P8M A;  4I06 A;  4RHM A;  2CEV A;  2ZAV A;  3KV2 A;  4IU1 A;  2PHO A;  4Q3U A;  3SL1 A;  2EF5 A;  4IU4 A;  4MYN A;  3SL0 A;  4Q41 A;  3TF3 A;  1XFK A;  1TBJ A;  2RLA A;  4IXU A;  2EF4 A;  2A0M A;  4RHL A;  1P8Q A;  3RLA A;  4DZ4 A;  4GSM A;  1T5F A;  4Q3R C;  4MYK A;  3PZL A;  3LP4 A;  2PHA A;  4RHJ A;  5RLA A;  4FCK A;  4GWD A;  4HWW A;  3DJ8 A;  1ZPE A;  4Q3Q A;  2PLL A;  3MFV A;  1PQ3 A;  3MFW A;  1P8N A;  4IU5 A;  4ITY A;  4Q3P A;  4Q3T A;  3GMZ A;  4Q3V A;  1P8O A;  4MXR A;  4RHQ A;  1GQ6 A;  4GSZ A;  4GWC A;  1RLA A;  3E8Q A;  3MJL A;  3NIO A;  3THJ A;  4HXQ A;  4HZE A;  4RHK A;  3THH A;  3THE A; 
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