4CEVA

Arginase from bacillus caldevelox, l-ornithine complex
Total Genus 112

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
112
sequence length
298
structure length
298
Chain Sequence
KPISIIGVPMDLGQTRRGVDMGPSAMRYAGVIERLERLHYDIEDLGDIPIGKAERLHEQGDSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHSIAIGTLAGVAKHYERLGVIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQIGGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERTDGVHLSLDLDGLDPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQIITSAEFVEVNPILDERNKTASVAVALMGSLFGEKLMAAAAAA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS2 (43-48)O1 (9-11)S1 (4-8)TI1 (12-15)TIV2 (63-66)3H4 (138-140)TIV1 (13-16)TIV5 (235-238)AH1 (23-30)AH2 (32-39)AH3 (68-88)3H2 (57-59)TI2 (62-65)TI3 (129-132)TII1 (65-68)TII2 (156-159)S7 (220-226)3H3 (99-103)AH4 (104-111)S8 (264-270)AH9 (203-216)TVIII1 (113-116)3H5 (166-168)S4 (116-121)AH10 (248-261)TI5 (133-136)AH5 (141-147)AH6 (152-156)TIV3 (157-160)S5 (169-174)3H6 (227-229)TIV6 (238-241)S6 (191-194)AH8 (195-201)TI6 (231-234)TIV7 (277-280)TI7 (232-235)TVIII2 (233-236)AH11 (281-294)3H7 (274-276)3H1 (20-22)S3 (91-95)AH7 (179-188)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Bacillus caldovelox
publication title Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily.
pubmed doi rcsb
molecule keywords PROTEIN (ARGINASE)
total genus 112
structure length 298
sequence length 298
chains with identical sequence B, C, D, E, F
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 1999-03-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4cevA00
4IU0A 1HQGA 5HJ9A 1TBJA 4MXRA 4MYKA 3THJA 4Q3TA 4IE3A 1WOHA 5CEVA 2EF4A 4IE2A 1HQFA 2PHAA 3LP4A 4IE1A 4I06A 1CEVA 3TH7A 4Q41A 3THHA 1T4PA 2PLLA 3SL1A 3GN0A 4RHLA 4Q40A 4G3HA 4GSZA 3E6VA 4MYFA 1ZPGA 1P8NA 4RHKA 1T4SA 1R1OA 1GQ6A 4RHIA 3CEVA 1WVBA 3MJLA 4IU5A 3LHLA 3DJ8A 4RLAA 5HJAA 1T4RA 4Q3RC 4IU4A 1HQ5A 4IXVA 3LP7A 3SL0A 1P8PA 2A0MA 3MMRA 1ZPEA 3MFWA 1P8QA 3THEA 1P8SA 2EF5A 1GQ7A 3NIOA 4GSMA 2EIVA 4CEVA 3M1RA 4Q3UA 4RHQA 1WOGA 2AEBA 1D3VA 5RLAA 3RLAA 3E8QA 4Q3RA 1T5FA 3SJTA 3SKKA 3KV2A 4GWCA 4IU1A 2CEVA 2RLAA 4Q3VA 1WOIA 1RLAA 4MYLA 4RHMA 3PZLA 4GSVA 2ZAVA 4HZEA 4IXUA 4Q3SA 3E9BA 4FCKA 4GWDA 4ITYA 4DZ4A 4HWWA 2PHOA 1T4TA 3GMZA 3E6KA 1T5GA 1XFKA 1P8RA 1HQHA 4Q3PA 1TBHA 1WVAA 3TF3A 1P8OA 1HQXA 1TA1A 1P8MA 3NIPA 4RHJA 1PQ3A 3NIQA 4Q42A 4HXQA 3E8ZA 1TBLA 4FCIA 3MFVA 3F80A 4MYNA 4Q3QA
chains in the Genus database with same CATH superfamily
4ZUNA 4IU0A 1HQGA 5HJ9A 1TBJA 4MXRA 4MYKA 5DC5A 4Q3TA 3THJA 3MZ7A 3Q9FA 4IE3A 5EF8A 4ZUPA 1WOHA 4CQFA 2EF4A 5CEVA 5DC6A 5G11A 4IE2A 3SFFA 1HQFA 5IX0A 2PHAA 4RN2A 3LP4A 4IE1A 5G13A 4I06A 1CEVA 3TH7A 4BZ9A 4CBTA 5EEMA 3THHA 4QA0A 1T4PA 3EZTA 4Q41A 2PLLA 1W22A 3C0ZA 5EF7A 5EENA 3SL1A 3GN0A 5A2SA 4CBYA 4RHLA 3MZ3A 4Q40A 4G3HA 3E6VA 4GSZA 4MYFA 5G0JA 1ZPGA 5D1CA 1P8NA 5JI5A 5G0XA 4RHKA 3Q9EA 1T4SA 1R1OA 1GQ6A 4RHIA 2V5WA 3CEVA 4BZ8A 1WVBA 1ZZ0A 3MJLA 4IU5A 2V5XA 3Q9CA 4LY1A 4ZUMA 3LHLA 3DJ8A 4RLAA 2VQWG 5G17A 5HJAA 1T4RA 5EEIA 4Q3RC 4IU4A 1HQ5A 3ZNSA 3C10A 4IXVA 5FUEA 3LP7A 3SL0A 5EFBD 1P8PA 4LXZA 2A0MA 3MMRA 1ZPEA 3F0RA 3MFWA 1P8QA 3THEA 4A69A 1P8SA 3F07A 2EF5A 1C3RA 5THUA 5FCWA 4ZUOA 1GQ7A 1ZZ3A 3NIOA 4GSMA 4RN1A 2EIVA 5G1CA 5G3WA 4CEVA 2VQJA 5EFNA 5IWGA 3F06A 5G10A 5THSA 3M1RA 4Q3UA 4QA4A 4RHQA 1WOGA 2AEBA 1D3VA 2VQVA 5EEKA 5RLAA 4ZURA 3RLAA 5BWZA 5G12A 3E8QA 4Q3RA 1T5FA 3EW8A 3SKKA 5DC8A 3SJTA 3KV2A 2GH6A 3EZPA 1C3PA 4GWCA 4IU1A 5EFJD 2CEVA 5G0YA 4BZ6A 2RLAA 4Q3VA 4QA5A 1WOIA 1RLAA 5EFHA 4MYLA 4BKXB 4QA7A 3ZNRA 4RHMA 3PZLA 4GSVA 2ZAVA 4HZEA 4IXUA 4Q3SA 5G1AA 1C3SA 3E9BA 4ZUQA 1T67A 5ICNB 4FCKA 3RQDA 4GWDA 3MENA 4ITYA 2VQOA 3MZ4A 4DZ4A 5THTA 4HWWA 2PHOA 1T4TA 3GMZA 5G1BA 2VQQA 5EFKB 5EEFA 5G0IA 3E6KA 1T69A 4RN0A 1T5GA 1XFKA 5DC7A 4BZ5A 3Q9BA 1P8RA 3MAXA 1T64A 1HQHA 4Q3PA 1TBHA 1WVAA 4QA3A 3TF3A 4QA6A 1P8OA 5THVA 4BZ7A 1HQXA 2VCGA 1VKGA 1TA1A 1P8MA 5D1BA 3NIPA 4RHJA 3C0YA 3MZ6A 1PQ3A 2VQMA 5LI3A 5EFGA 3NIQA 4QA1A 5G0GA 4Q42A 3EWFA 3E8ZA 4HXQA 1ZZ1A 1TBLA 5G0HA 4FCIA 5D1DA 3SFHA 3MFVA 4QA2A 3F80A 4MYNA 4Q3QA
chains in the Genus database with same CATH topology
4IU0A 1HQGA 5HJ9A 1TBJA 4MXRA 4MYKA 3THJA 4Q3TA 4IE3A 1WOHA 5CEVA 2EF4A 4IE2A 1HQFA 2PHAA 3LP4A 4IE1A 4I06A 1CEVA 3TH7A 4Q41A 3THHA 1T4PA 2PLLA 3SL1A 3GN0A 4RHLA 4Q40A 4G3HA 4GSZA 3E6VA 4MYFA 1ZPGA 1P8NA 4RHKA 1T4SA 1R1OA 1GQ6A 4RHIA 3CEVA 1WVBA 3MJLA 4IU5A 3LHLA 3DJ8A 4RLAA 5HJAA 1T4RA 4Q3RC 4IU4A 1HQ5A 4IXVA 3LP7A 3SL0A 1P8PA 2A0MA 3MMRA 1ZPEA 3MFWA 1P8QA 3THEA 1P8SA 2EF5A 1GQ7A 3NIOA 4GSMA 2EIVA 4CEVA 3M1RA 4Q3UA 4RHQA 1WOGA 2AEBA 1D3VA 5RLAA 3RLAA 3E8QA 4Q3RA 1T5FA 3SJTA 3SKKA 3KV2A 4GWCA 4IU1A 2CEVA 2RLAA 4Q3VA 1WOIA 1RLAA 4MYLA 4RHMA 3PZLA 4GSVA 2ZAVA 4HZEA 4IXUA 4Q3SA 3E9BA 4FCKA 4GWDA 4ITYA 4DZ4A 4HWWA 2PHOA 1T4TA 3GMZA 3E6KA 1T5GA 1XFKA 1P8RA 1HQHA 4Q3PA 1TBHA 1WVAA 3TF3A 1P8OA 1HQXA 1TA1A 1P8MA 3NIPA 4RHJA 1PQ3A 3NIQA 4Q42A 4HXQA 3E8ZA 1TBLA 4FCIA 3MFVA 3F80A 4MYNA 4Q3QA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IU0 A;  1HQG A;  5HJ9 A;  1TBJ A;  4MXR A;  4MYK A;  3THJ A;  4Q3T A;  4IE3 A;  1WOH A;  5CEV A;  2EF4 A;  4IE2 A;  1HQF A;  2PHA A;  3LP4 A;  4IE1 A;  4I06 A;  1CEV A;  3TH7 A;  4Q41 A;  3THH A;  1T4P A;  2PLL A;  3SL1 A;  3GN0 A;  4RHL A;  4Q40 A;  4G3H A;  4GSZ A;  3E6V A;  4MYF A;  1ZPG A;  1P8N A;  4RHK A;  1T4S A;  1R1O A;  1GQ6 A;  4RHI A;  3CEV A;  1WVB A;  3MJL A;  4IU5 A;  3LHL A;  3DJ8 A;  4RLA A;  5HJA A;  1T4R A;  4Q3R C;  4IU4 A;  1HQ5 A;  4IXV A;  3LP7 A;  3SL0 A;  1P8P A;  2A0M A;  3MMR A;  1ZPE A;  3MFW A;  1P8Q A;  3THE A;  1P8S A;  2EF5 A;  1GQ7 A;  3NIO A;  4GSM A;  2EIV A;  4CEV A;  3M1R A;  4Q3U A;  4RHQ A;  1WOG A;  2AEB A;  1D3V A;  5RLA A;  3RLA A;  3E8Q A;  4Q3R A;  1T5F A;  3SJT A;  3SKK A;  3KV2 A;  4GWC A;  4IU1 A;  2CEV A;  2RLA A;  4Q3V A;  1WOI A;  1RLA A;  4MYL A;  4RHM A;  3PZL A;  4GSV A;  2ZAV A;  4HZE A;  4IXU A;  4Q3S A;  3E9B A;  4FCK A;  4GWD A;  4ITY A;  4DZ4 A;  4HWW A;  2PHO A;  1T4T A;  3GMZ A;  3E6K A;  1T5G A;  1XFK A;  1P8R A;  1HQH A;  4Q3P A;  1TBH A;  1WVA A;  3TF3 A;  1P8O A;  1HQX A;  1TA1 A;  1P8M A;  3NIP A;  4RHJ A;  1PQ3 A;  3NIQ A;  4Q42 A;  4HXQ A;  3E8Z A;  1TBL A;  4FCI A;  3MFV A;  3F80 A;  4MYN A;  4Q3Q A; 
#chains in the Genus database with same CATH topology
 4ZUN A;  4IU0 A;  1HQG A;  5HJ9 A;  1TBJ A;  4MXR A;  4MYK A;  5DC5 A;  4Q3T A;  3THJ A;  3MZ7 A;  3Q9F A;  4IE3 A;  5EF8 A;  4ZUP A;  1WOH A;  4CQF A;  2EF4 A;  5CEV A;  5DC6 A;  5G11 A;  4IE2 A;  3SFF A;  1HQF A;  5IX0 A;  2PHA A;  4RN2 A;  3LP4 A;  4IE1 A;  5G13 A;  4I06 A;  1CEV A;  3TH7 A;  4BZ9 A;  4CBT A;  5EEM A;  3THH A;  4QA0 A;  1T4P A;  3EZT A;  4Q41 A;  2PLL A;  1W22 A;  3C0Z A;  5EF7 A;  5EEN A;  3SL1 A;  3GN0 A;  5A2S A;  4CBY A;  4RHL A;  3MZ3 A;  4Q40 A;  4G3H A;  3E6V A;  4GSZ A;  4MYF A;  5G0J A;  1ZPG A;  5D1C A;  1P8N A;  5JI5 A;  5G0X A;  4RHK A;  3Q9E A;  1T4S A;  1R1O A;  1GQ6 A;  4RHI A;  2V5W A;  3CEV A;  4BZ8 A;  1WVB A;  1ZZ0 A;  3MJL A;  4IU5 A;  2V5X A;  3Q9C A;  4LY1 A;  4ZUM A;  3LHL A;  3DJ8 A;  4RLA A;  2VQW G;  5G17 A;  5HJA A;  1T4R A;  5EEI A;  4Q3R C;  4IU4 A;  1HQ5 A;  3ZNS A;  3C10 A;  4IXV A;  5FUE A;  3LP7 A;  3SL0 A;  5EFB D;  1P8P A;  4LXZ A;  2A0M A;  3MMR A;  1ZPE A;  3F0R A;  3MFW A;  1P8Q A;  3THE A;  4A69 A;  1P8S A;  3F07 A;  2EF5 A;  1C3R A;  5THU A;  5FCW A;  4ZUO A;  1GQ7 A;  1ZZ3 A;  3NIO A;  4GSM A;  4RN1 A;  2EIV A;  5G1C A;  5G3W A;  4CEV A;  2VQJ A;  5EFN A;  5IWG A;  3F06 A;  5G10 A;  5THS A;  3M1R A;  4Q3U A;  4QA4 A;  4RHQ A;  1WOG A;  2AEB A;  1D3V A;  2VQV A;  5EEK A;  5RLA A;  4ZUR A;  3RLA A;  5BWZ A;  5G12 A;  3E8Q A;  4Q3R A;  1T5F A;  3EW8 A;  3SKK A;  5DC8 A;  3SJT A;  3KV2 A;  2GH6 A;  3EZP A;  1C3P A;  4GWC A;  4IU1 A;  5EFJ D;  2CEV A;  5G0Y A;  4BZ6 A;  2RLA A;  4Q3V A;  4QA5 A;  1WOI A;  1RLA A;  5EFH A;  4MYL A;  4BKX B;  4QA7 A;  3ZNR A;  4RHM A;  3PZL A;  4GSV A;  2ZAV A;  4HZE A;  4IXU A;  4Q3S A;  5G1A A;  1C3S A;  3E9B A;  4ZUQ A;  1T67 A;  5ICN B;  4FCK A;  3RQD A;  4GWD A;  3MEN A;  4ITY A;  2VQO A;  3MZ4 A;  4DZ4 A;  5THT A;  4HWW A;  2PHO A;  1T4T A;  3GMZ A;  5G1B A;  2VQQ A;  5EFK B;  5EEF A;  5G0I A;  3E6K A;  1T69 A;  4RN0 A;  1T5G A;  1XFK A;  5DC7 A;  4BZ5 A;  3Q9B A;  1P8R A;  3MAX A;  1T64 A;  1HQH A;  4Q3P A;  1TBH A;  1WVA A;  4QA3 A;  3TF3 A;  4QA6 A;  1P8O A;  5THV A;  4BZ7 A;  1HQX A;  2VCG A;  1VKG A;  1TA1 A;  1P8M A;  5D1B A;  3NIP A;  4RHJ A;  3C0Y A;  3MZ6 A;  1PQ3 A;  2VQM A;  5LI3 A;  5EFG A;  3NIQ A;  4QA1 A;  5G0G A;  4Q42 A;  3EWF A;  3E8Z A;  4HXQ A;  1ZZ1 A;  1TBL A;  5G0H A;  4FCI A;  5D1D A;  3SFH A;  3MFV A;  4QA2 A;  3F80 A;  4MYN A;  4Q3Q A; 
#chains in the Genus database with same CATH homology
 4IU0 A;  1HQG A;  5HJ9 A;  1TBJ A;  4MXR A;  4MYK A;  3THJ A;  4Q3T A;  4IE3 A;  1WOH A;  5CEV A;  2EF4 A;  4IE2 A;  1HQF A;  2PHA A;  3LP4 A;  4IE1 A;  4I06 A;  1CEV A;  3TH7 A;  4Q41 A;  3THH A;  1T4P A;  2PLL A;  3SL1 A;  3GN0 A;  4RHL A;  4Q40 A;  4G3H A;  4GSZ A;  3E6V A;  4MYF A;  1ZPG A;  1P8N A;  4RHK A;  1T4S A;  1R1O A;  1GQ6 A;  4RHI A;  3CEV A;  1WVB A;  3MJL A;  4IU5 A;  3LHL A;  3DJ8 A;  4RLA A;  5HJA A;  1T4R A;  4Q3R C;  4IU4 A;  1HQ5 A;  4IXV A;  3LP7 A;  3SL0 A;  1P8P A;  2A0M A;  3MMR A;  1ZPE A;  3MFW A;  1P8Q A;  3THE A;  1P8S A;  2EF5 A;  1GQ7 A;  3NIO A;  4GSM A;  2EIV A;  4CEV A;  3M1R A;  4Q3U A;  4RHQ A;  1WOG A;  2AEB A;  1D3V A;  5RLA A;  3RLA A;  3E8Q A;  4Q3R A;  1T5F A;  3SJT A;  3SKK A;  3KV2 A;  4GWC A;  4IU1 A;  2CEV A;  2RLA A;  4Q3V A;  1WOI A;  1RLA A;  4MYL A;  4RHM A;  3PZL A;  4GSV A;  2ZAV A;  4HZE A;  4IXU A;  4Q3S A;  3E9B A;  4FCK A;  4GWD A;  4ITY A;  4DZ4 A;  4HWW A;  2PHO A;  1T4T A;  3GMZ A;  3E6K A;  1T5G A;  1XFK A;  1P8R A;  1HQH A;  4Q3P A;  1TBH A;  1WVA A;  3TF3 A;  1P8O A;  1HQX A;  1TA1 A;  1P8M A;  3NIP A;  4RHJ A;  1PQ3 A;  3NIQ A;  4Q42 A;  4HXQ A;  3E8Z A;  1TBL A;  4FCI A;  3MFV A;  3F80 A;  4MYN A;  4Q3Q A; 
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