5CEVA

Arginase from bacillus caldevelox, l-lysine complex
Total Genus 118

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
118
sequence length
298
structure length
298
Chain Sequence
KPISIIGVPMDLGQTRRGVDMGPSAMRYAGVIERLERLHYDIEDLGDIPIGKAERLHEQGDSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHSIAIGTLAGVAKHYERLGVIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQIGGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERTDGVHLSLDLDGLDPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQIITSAEFVEVNPILDERNKTASVAVALMGSLFGEKLM

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS2 (43-48)O1 (9-11)S1 (4-8)TI1 (12-15)TIV1 (63-66)3H3 (138-140)TVIII3 (238-241)AH1 (23-30)TIV3 (277-280)AH2 (32-39)AH3 (68-88)TII1 (65-68)TII2 (156-159)S7 (220-226)AH4 (100-111)S8 (264-270)AH9 (203-216)TVIII1 (113-116)3H4 (166-168)S4 (116-121)AH10 (248-261)TI5 (133-136)AH5 (141-147)AH6 (152-156)TI'1 (157-160)S5 (169-174)S6 (191-194)AH8 (195-201)TI6 (231-234)O2 (236-238)TI7 (232-235)TVIII2 (233-236)AH11 (281-294)3H6 (274-276)3H2 (57-59)TI2 (62-65)3H5 (227-229)TI3 (129-132)3H1 (20-22)S3 (91-95)AH7 (179-188)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Bacillus caldovelox
publication title Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily.
pubmed doi rcsb
molecule keywords PROTEIN (ARGINASE)
total genus 118
structure length 298
sequence length 298
chains with identical sequence B, C, D, E, F
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 1999-03-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 5cevA00
4RHLA 4ITYA 4Q3VA 3RLAA 3MFWA 3E9BA 3NIQA 4Q42A 3LP7A 1P8SA 4RHIA 3LHLA 4HWWA 3E6VA 4RHKA 1P8NA 4IE2A 1T4RA 1CEVA 3LP4A 1XFKA 1T5FA 3GN0A 3PZLA 4MXRA 3SL0A 3MMRA 1T5GA 3MJLA 4Q3UA 1PQ3A 1HQGA 4IU4A 3SKKA 1RLAA 1WOHA 2AEBA 2EF5A 4Q40A 4Q3RC 4HXQA 3F80A 1P8RA 4Q3SA 3TF3A 2EIVA 2PHAA 1HQFA 1TBHA 3GMZA 4Q3QA 2RLAA 3SL1A 3M1RA 1ZPEA 4GWDA 4RHQA 1TBLA 4GWCA 1T4TA 1HQXA 5HJ9A 3TH7A 4MYLA 4IE1A 1ZPGA 4G3HA 4RHMA 3E6KA 3MFVA 5RLAA 4DZ4A 4Q41A 1P8OA 1P8PA 5CEVA 3CEVA 4Q3TA 4GSMA 4IU1A 1P8QA 1P8MA 4HZEA 4GSVA 4Q3PA 4FCKA 4MYNA 2EF4A 1D3VA 1WVBA 2A0MA 1TA1A 4GSZA 1GQ6A 4I06A 4MYKA 1WOGA 3E8QA 4RHJA 3NIPA 3KV2A 4Q3RA 3THEA 4IU5A 4IXUA 4IXVA 3THJA 3THHA 1GQ7A 1T4PA 4CEVA 2CEVA 4IU0A 4FCIA 1HQ5A 1WVAA 1WOIA 2PLLA 5HJAA 1HQHA 4MYFA 1TBJA 3NIOA 4RLAA 2ZAVA 4IE3A 1T4SA 1R1OA 3E8ZA 3DJ8A 3SJTA 2PHOA
chains in the Genus database with same CATH superfamily
5THTA 4RHLA 3F06A 4ITYA 4Q3VA 5DC5A 3Q9EA 3RLAA 3MFWA 3E9BA 3NIQA 4Q42A 4CBTA 4ZUQA 1W22A 3C0YA 5BWZA 4QA0A 3LP7A 5EEKA 1P8SA 5EFBD 4RHIA 3LHLA 5DC8A 4HWWA 5G10A 3E6VA 4RHKA 1P8NA 3EW8A 4IE2A 5D1CA 4ZUPA 1T4RA 1CEVA 3C10A 1C3RA 3LP4A 5EFKB 1XFKA 1T5FA 3GN0A 3PZLA 4MXRA 3RQDA 5ICNB 4LXZA 5EEFA 3SL0A 5DC6A 3MMRA 1T5GA 5G0YA 2VQVA 4RN1A 3MENA 3MJLA 4Q3UA 1PQ3A 1HQGA 5IWGA 4IU4A 3SKKA 4BZ5A 1RLAA 1WOHA 5G12A 1ZZ3A 2AEBA 2EF5A 4Q40A 4Q3RC 3SFFA 1ZZ0A 4ZURA 5DC7A 4CBYA 4HXQA 1C3SA 3MZ3A 2V5WA 3F80A 1P8RA 5A2SA 4QA3A 3EWFA 5EENA 4Q3SA 5EFGA 5G0HA 3TF3A 2EIVA 2PHAA 1HQFA 1TBHA 2VQQA 2V5XA 4RN2A 4QA7A 3F07A 5IX0A 5G0XA 4ZUNA 4QA5A 3C0ZA 3GMZA 4Q3QA 3MAXA 2RLAA 3SL1A 5THSA 3M1RA 1ZPEA 4GWDA 4RHQA 1TBLA 4QA4A 4ZUMA 4GWCA 1T4TA 1HQXA 3MZ4A 5HJ9A 3TH7A 4MYLA 1ZZ1A 4BZ9A 4IE1A 1ZPGA 4G3HA 4RHMA 3E6KA 5G17A 3MFVA 5G0IA 2VQWG 5RLAA 4DZ4A 4Q41A 1P8OA 2GH6A 1T69A 3MZ6A 5EF8A 4ZUOA 1P8PA 5FUEA 5CEVA 3CEVA 4RN0A 4Q3TA 5EFHA 4GSMA 5JI5A 5G1CA 5D1BA 4IU1A 1C3PA 1P8QA 5FCWA 1P8MA 2VQMA 3EZTA 4HZEA 4GSVA 4Q3PA 4FCKA 4MYNA 2EF4A 1D3VA 1WVBA 2A0MA 4BZ7A 1TA1A 5G3WA 4GSZA 3MZ7A 4QA2A 1GQ6A 3F0RA 4LY1A 4I06A 4MYKA 3ZNRA 3Q9CA 1WOGA 2VCGA 5THUA 5EF7A 3E8QA 4BZ8A 5G1BA 5THVA 5G0GA 4RHJA 3NIPA 3KV2A 5G11A 4Q3RA 3THEA 4IU5A 4IXUA 4IXVA 3THJA 3ZNSA 4BKXB 2VQJA 5EEIA 4CQFA 2VQOA 3THHA 1GQ7A 3Q9BA 1T4PA 5G13A 5D1DA 3EZPA 4CEVA 2CEVA 4IU0A 1VKGA 4FCIA 1HQ5A 5LI3A 1WVAA 3SFHA 1WOIA 4BZ6A 2PLLA 5HJAA 1HQHA 4MYFA 1T64A 1TBJA 4QA6A 4QA1A 5EFNA 3Q9FA 5EFJD 3NIOA 5G1AA 5G0JA 4RLAA 4A69A 2ZAVA 4IE3A 1T4SA 1R1OA 3E8ZA 1T67A 3DJ8A 3SJTA 2PHOA 5EEMA
chains in the Genus database with same CATH topology
4RHLA 4ITYA 4Q3VA 3RLAA 3MFWA 3E9BA 3NIQA 4Q42A 3LP7A 1P8SA 4RHIA 3LHLA 4HWWA 3E6VA 4RHKA 1P8NA 4IE2A 1T4RA 1CEVA 3LP4A 1XFKA 1T5FA 3GN0A 3PZLA 4MXRA 3SL0A 3MMRA 1T5GA 3MJLA 4Q3UA 1PQ3A 1HQGA 4IU4A 3SKKA 1RLAA 1WOHA 2AEBA 2EF5A 4Q40A 4Q3RC 4HXQA 3F80A 1P8RA 4Q3SA 3TF3A 2EIVA 2PHAA 1HQFA 1TBHA 3GMZA 4Q3QA 2RLAA 3SL1A 3M1RA 1ZPEA 4GWDA 4RHQA 1TBLA 4GWCA 1T4TA 1HQXA 5HJ9A 3TH7A 4MYLA 4IE1A 1ZPGA 4G3HA 4RHMA 3E6KA 3MFVA 5RLAA 4DZ4A 4Q41A 1P8OA 1P8PA 5CEVA 3CEVA 4Q3TA 4GSMA 4IU1A 1P8QA 1P8MA 4HZEA 4GSVA 4Q3PA 4FCKA 4MYNA 2EF4A 1D3VA 1WVBA 2A0MA 1TA1A 4GSZA 1GQ6A 4I06A 4MYKA 1WOGA 3E8QA 4RHJA 3NIPA 3KV2A 4Q3RA 3THEA 4IU5A 4IXUA 4IXVA 3THJA 3THHA 1GQ7A 1T4PA 4CEVA 2CEVA 4IU0A 4FCIA 1HQ5A 1WVAA 1WOIA 2PLLA 5HJAA 1HQHA 4MYFA 1TBJA 3NIOA 4RLAA 2ZAVA 4IE3A 1T4SA 1R1OA 3E8ZA 3DJ8A 3SJTA 2PHOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RHL A;  4ITY A;  4Q3V A;  3RLA A;  3MFW A;  3E9B A;  3NIQ A;  4Q42 A;  3LP7 A;  1P8S A;  4RHI A;  3LHL A;  4HWW A;  3E6V A;  4RHK A;  1P8N A;  4IE2 A;  1T4R A;  1CEV A;  3LP4 A;  1XFK A;  1T5F A;  3GN0 A;  3PZL A;  4MXR A;  3SL0 A;  3MMR A;  1T5G A;  3MJL A;  4Q3U A;  1PQ3 A;  1HQG A;  4IU4 A;  3SKK A;  1RLA A;  1WOH A;  2AEB A;  2EF5 A;  4Q40 A;  4Q3R C;  4HXQ A;  3F80 A;  1P8R A;  4Q3S A;  3TF3 A;  2EIV A;  2PHA A;  1HQF A;  1TBH A;  3GMZ A;  4Q3Q A;  2RLA A;  3SL1 A;  3M1R A;  1ZPE A;  4GWD A;  4RHQ A;  1TBL A;  4GWC A;  1T4T A;  1HQX A;  5HJ9 A;  3TH7 A;  4MYL A;  4IE1 A;  1ZPG A;  4G3H A;  4RHM A;  3E6K A;  3MFV A;  5RLA A;  4DZ4 A;  4Q41 A;  1P8O A;  1P8P A;  5CEV A;  3CEV A;  4Q3T A;  4GSM A;  4IU1 A;  1P8Q A;  1P8M A;  4HZE A;  4GSV A;  4Q3P A;  4FCK A;  4MYN A;  2EF4 A;  1D3V A;  1WVB A;  2A0M A;  1TA1 A;  4GSZ A;  1GQ6 A;  4I06 A;  4MYK A;  1WOG A;  3E8Q A;  4RHJ A;  3NIP A;  3KV2 A;  4Q3R A;  3THE A;  4IU5 A;  4IXU A;  4IXV A;  3THJ A;  3THH A;  1GQ7 A;  1T4P A;  4CEV A;  2CEV A;  4IU0 A;  4FCI A;  1HQ5 A;  1WVA A;  1WOI A;  2PLL A;  5HJA A;  1HQH A;  4MYF A;  1TBJ A;  3NIO A;  4RLA A;  2ZAV A;  4IE3 A;  1T4S A;  1R1O A;  3E8Z A;  3DJ8 A;  3SJT A;  2PHO A; 
#chains in the Genus database with same CATH topology
 5THT A;  4RHL A;  3F06 A;  4ITY A;  4Q3V A;  5DC5 A;  3Q9E A;  3RLA A;  3MFW A;  3E9B A;  3NIQ A;  4Q42 A;  4CBT A;  4ZUQ A;  1W22 A;  3C0Y A;  5BWZ A;  4QA0 A;  3LP7 A;  5EEK A;  1P8S A;  5EFB D;  4RHI A;  3LHL A;  5DC8 A;  4HWW A;  5G10 A;  3E6V A;  4RHK A;  1P8N A;  3EW8 A;  4IE2 A;  5D1C A;  4ZUP A;  1T4R A;  1CEV A;  3C10 A;  1C3R A;  3LP4 A;  5EFK B;  1XFK A;  1T5F A;  3GN0 A;  3PZL A;  4MXR A;  3RQD A;  5ICN B;  4LXZ A;  5EEF A;  3SL0 A;  5DC6 A;  3MMR A;  1T5G A;  5G0Y A;  2VQV A;  4RN1 A;  3MEN A;  3MJL A;  4Q3U A;  1PQ3 A;  1HQG A;  5IWG A;  4IU4 A;  3SKK A;  4BZ5 A;  1RLA A;  1WOH A;  5G12 A;  1ZZ3 A;  2AEB A;  2EF5 A;  4Q40 A;  4Q3R C;  3SFF A;  1ZZ0 A;  4ZUR A;  5DC7 A;  4CBY A;  4HXQ A;  1C3S A;  3MZ3 A;  2V5W A;  3F80 A;  1P8R A;  5A2S A;  4QA3 A;  3EWF A;  5EEN A;  4Q3S A;  5EFG A;  5G0H A;  3TF3 A;  2EIV A;  2PHA A;  1HQF A;  1TBH A;  2VQQ A;  2V5X A;  4RN2 A;  4QA7 A;  3F07 A;  5IX0 A;  5G0X A;  4ZUN A;  4QA5 A;  3C0Z A;  3GMZ A;  4Q3Q A;  3MAX A;  2RLA A;  3SL1 A;  5THS A;  3M1R A;  1ZPE A;  4GWD A;  4RHQ A;  1TBL A;  4QA4 A;  4ZUM A;  4GWC A;  1T4T A;  1HQX A;  3MZ4 A;  5HJ9 A;  3TH7 A;  4MYL A;  1ZZ1 A;  4BZ9 A;  4IE1 A;  1ZPG A;  4G3H A;  4RHM A;  3E6K A;  5G17 A;  3MFV A;  5G0I A;  2VQW G;  5RLA A;  4DZ4 A;  4Q41 A;  1P8O A;  2GH6 A;  1T69 A;  3MZ6 A;  5EF8 A;  4ZUO A;  1P8P A;  5FUE A;  5CEV A;  3CEV A;  4RN0 A;  4Q3T A;  5EFH A;  4GSM A;  5JI5 A;  5G1C A;  5D1B A;  4IU1 A;  1C3P A;  1P8Q A;  5FCW A;  1P8M A;  2VQM A;  3EZT A;  4HZE A;  4GSV A;  4Q3P A;  4FCK A;  4MYN A;  2EF4 A;  1D3V A;  1WVB A;  2A0M A;  4BZ7 A;  1TA1 A;  5G3W A;  4GSZ A;  3MZ7 A;  4QA2 A;  1GQ6 A;  3F0R A;  4LY1 A;  4I06 A;  4MYK A;  3ZNR A;  3Q9C A;  1WOG A;  2VCG A;  5THU A;  5EF7 A;  3E8Q A;  4BZ8 A;  5G1B A;  5THV A;  5G0G A;  4RHJ A;  3NIP A;  3KV2 A;  5G11 A;  4Q3R A;  3THE A;  4IU5 A;  4IXU A;  4IXV A;  3THJ A;  3ZNS A;  4BKX B;  2VQJ A;  5EEI A;  4CQF A;  2VQO A;  3THH A;  1GQ7 A;  3Q9B A;  1T4P A;  5G13 A;  5D1D A;  3EZP A;  4CEV A;  2CEV A;  4IU0 A;  1VKG A;  4FCI A;  1HQ5 A;  5LI3 A;  1WVA A;  3SFH A;  1WOI A;  4BZ6 A;  2PLL A;  5HJA A;  1HQH A;  4MYF A;  1T64 A;  1TBJ A;  4QA6 A;  4QA1 A;  5EFN A;  3Q9F A;  5EFJ D;  3NIO A;  5G1A A;  5G0J A;  4RLA A;  4A69 A;  2ZAV A;  4IE3 A;  1T4S A;  1R1O A;  3E8Z A;  1T67 A;  3DJ8 A;  3SJT A;  2PHO A;  5EEM A; 
#chains in the Genus database with same CATH homology
 4RHL A;  4ITY A;  4Q3V A;  3RLA A;  3MFW A;  3E9B A;  3NIQ A;  4Q42 A;  3LP7 A;  1P8S A;  4RHI A;  3LHL A;  4HWW A;  3E6V A;  4RHK A;  1P8N A;  4IE2 A;  1T4R A;  1CEV A;  3LP4 A;  1XFK A;  1T5F A;  3GN0 A;  3PZL A;  4MXR A;  3SL0 A;  3MMR A;  1T5G A;  3MJL A;  4Q3U A;  1PQ3 A;  1HQG A;  4IU4 A;  3SKK A;  1RLA A;  1WOH A;  2AEB A;  2EF5 A;  4Q40 A;  4Q3R C;  4HXQ A;  3F80 A;  1P8R A;  4Q3S A;  3TF3 A;  2EIV A;  2PHA A;  1HQF A;  1TBH A;  3GMZ A;  4Q3Q A;  2RLA A;  3SL1 A;  3M1R A;  1ZPE A;  4GWD A;  4RHQ A;  1TBL A;  4GWC A;  1T4T A;  1HQX A;  5HJ9 A;  3TH7 A;  4MYL A;  4IE1 A;  1ZPG A;  4G3H A;  4RHM A;  3E6K A;  3MFV A;  5RLA A;  4DZ4 A;  4Q41 A;  1P8O A;  1P8P A;  5CEV A;  3CEV A;  4Q3T A;  4GSM A;  4IU1 A;  1P8Q A;  1P8M A;  4HZE A;  4GSV A;  4Q3P A;  4FCK A;  4MYN A;  2EF4 A;  1D3V A;  1WVB A;  2A0M A;  1TA1 A;  4GSZ A;  1GQ6 A;  4I06 A;  4MYK A;  1WOG A;  3E8Q A;  4RHJ A;  3NIP A;  3KV2 A;  4Q3R A;  3THE A;  4IU5 A;  4IXU A;  4IXV A;  3THJ A;  3THH A;  1GQ7 A;  1T4P A;  4CEV A;  2CEV A;  4IU0 A;  4FCI A;  1HQ5 A;  1WVA A;  1WOI A;  2PLL A;  5HJA A;  1HQH A;  4MYF A;  1TBJ A;  3NIO A;  4RLA A;  2ZAV A;  4IE3 A;  1T4S A;  1R1O A;  3E8Z A;  3DJ8 A;  3SJT A;  2PHO A; 
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