1E5GA

Solution structure of central cp module pair of a pox virus complement inhibitor
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
120
structure length
120
Chain Sequence
RRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution Structure and Dynamics of the Central Ccp Module Pair of a Poxvirus Complement Control Protein
pubmed doi rcsb
molecule tags Complement inhibitor
source organism Vaccinia virus
molecule keywords COMPLEMENT CONTROL PROTEIN C3
total genus 12
structure length 120
sequence length 120
ec nomenclature
pdb deposition date 2000-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1e5gA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1e5gA02
5FO8C 3M7PA 1H2PP 2G7IA 2EHFA 1OK2A 1C1ZA 4MUCA 1OK3A 2A55A 3ZD2A 5HZPB 3OEDC 2XWJI 5JPMG 2XRBA 4AYEA 1MD7A 2ERJA 2CKUA 4C16A 3TVJA 4LOSA 4AYIA 2W80A 1Q3XA 1NWVA 2V8EA 5HYTB 1HFIA 1VVDA 2YRAA 2XWBF 4J38B 1G4GA 4YNXA 2MCYA 4B2RA 3IX0A 1GKNA 1QUBA 1TPGA 2CG6A 2JGWA 4F4OC 1TPNA 1O9AA 1PPQA 5HYPA 1GPZA 4JHSA 1GHQB 3MQLA 2XQWC 2RKZA 1HCCA 1E8BA 4B2SA 2B5ID 4K12A 4FXGG 2YBYA 1OJWA 2KRIA 2UWNA 3ZRZA 1LY2A 1FBRA 2BZMA 4ONTD 4CSYA 1H2QP 4PZ5A 2CG7A 3O8EB 3KXVA 3OP8A 2JRAA 1SRZA 4DJZA 2XRDA 3ERBA 2W81A 3ZD1A 2RLQA 2RL0A 3GOVA 3R62A 1OK1A 3T5OA 4KKDA 1ZJKA 1SS2A 2IZ3A 2JGXA 1U5MA 3KZJA 3L89M 1CKLA 5HYUB 1H04P 3GXEA 4WJG2 1H03P 1MD8A 2LOJA 3OXUD 1G4FA 1GKGA 4ZH1D 1Z92B 2QY0A 3INBC 1ELVA 2O39C 1E88A 1E5GA 2MCZA 1VVCA 4A5WB 5I0QB 2RLPA 3IU3I 2EC3A 3SW0X 3CALA 4IGDA 2WIIC 1OK9A 2KMSA 1OJYA 1TPMA 4AYMA 3NFPI 1OJVA 2RKYA 1QO6A 2IZ4A 1HFHA 3EJHA 1UOTP 1QGBA 4AYDA 3RJ3D 4LOTA
chains in the Genus database with same CATH superfamily
3WSYA 5FO8C 3M7PA 1H2PP 2Y8SA 2G7IA 2Y8RA 2EHFA 5DN4A 1OK2A 4MSLA 1C1ZA 4MUCA 1OK3A 2A55A 3ZD2A 5HZPB 3OEDC 2I2LA 2XWJI 3FGTA 5JPMG 2XRBA 4AYEA 1MD7A 2ERJA 2CKUA 4C16A 3TVJA 4LOSA 4AYIA 2W80A 1Q3XA 1NWVA 2V8EA 5HYTB 1HFIA 1VVDA 2YRAA 2XWBF 4J38B 1G4GA 4YNXA 2MCYA 4B2RA 3IX0A 1GKNA 1QUBA 1TPGA 2CG6A 2JGWA 4F4OC 1TPNA 1O9AA 1PPQA 4PO7A 5HYPA 1GPZA 4JHSA 1GHQB 3K3TA 2XQWC 3MQLA 2RKZA 4APLA 1HCCA 1E8BA 4B2SA 2B5ID 4K12A 2ZYCA 4FXGG 2YBYA 1OJWA 2KRIA 2UWNA 3WSXA 3ZRZA 1LY2A 1FBRA 2BZMA 4ONTD 4CSYA 1H2QP 4PZ5A 2CG7A 3O8EB 3ZLEA 3KXVA 3OP8A 2JRAA 1SRZA 5DN5A 2XRDA 3ERBA 4BWCA 4DJZA 2W81A 3ZD1A 2RLQA 2RL0A 3GOVA 3R62A 1OK1A 3T5OA 4KKDA 1ZJKA 1SS2A 2IZ3A 2JGXA 1U5MA 2X2ZA 3KZJA 3L89M 1CKLA 5HYUB 1H04P 3GXEA 4WJG2 1H03P 1MD8A 2LOJA 3OXUD 1G4FA 1GKGA 3ZLDA 4ZH1D 1Z92B 2QY0A 3INBC 1ELVA 2O39C 1E88A 1E5GA 2MCZA 1VVCA 4A5WB 5I0QB 2RLPA 3IU3I 3F6KA 2EC3A 3NJAA 3SW0X 3CALA 4IGDA 2WIIC 1OK9A 2KMSA 1OJYA 1TPMA 4YIZA 4N7EA 2Y8TA 4AYMA 3NFPI 1OJVA 2RKYA 1QO6A 2IZ4A 1HFHA 3EJHA 3FGRA 1UOTP 1QGBA 3VWOA 4AYDA 3CI0J 3RJ3D 1RLHA 4LOTA
chains in the Genus database with same CATH topology
5FO8C 3M7PA 1H2PP 2G7IA 2EHFA 1OK2A 1C1ZA 4MUCA 1OK3A 2A55A 3ZD2A 5HZPB 3OEDC 2XWJI 5JPMG 2XRBA 4AYEA 1MD7A 2ERJA 2CKUA 4C16A 3TVJA 4LOSA 4AYIA 2W80A 1Q3XA 1NWVA 2V8EA 5HYTB 1HFIA 1VVDA 2YRAA 2XWBF 4J38B 1G4GA 4YNXA 2MCYA 4B2RA 3IX0A 1GKNA 1QUBA 1TPGA 2CG6A 2JGWA 4F4OC 1TPNA 1O9AA 1PPQA 5HYPA 1GPZA 4JHSA 1GHQB 3MQLA 2XQWC 2RKZA 1HCCA 1E8BA 4B2SA 2B5ID 4K12A 4FXGG 2YBYA 1OJWA 2KRIA 2UWNA 3ZRZA 1LY2A 1FBRA 2BZMA 4ONTD 4CSYA 1H2QP 4PZ5A 2CG7A 3O8EB 3KXVA 3OP8A 2JRAA 1SRZA 4DJZA 2XRDA 3ERBA 2W81A 3ZD1A 2RLQA 2RL0A 3GOVA 3R62A 1OK1A 3T5OA 4KKDA 1ZJKA 1SS2A 2IZ3A 2JGXA 1U5MA 3KZJA 3L89M 1CKLA 5HYUB 1H04P 3GXEA 4WJG2 1H03P 1MD8A 2LOJA 3OXUD 1G4FA 1GKGA 4ZH1D 1Z92B 2QY0A 3INBC 1ELVA 2O39C 1E88A 1E5GA 2MCZA 1VVCA 4A5WB 5I0QB 2RLPA 3IU3I 2EC3A 3SW0X 3CALA 4IGDA 2WIIC 1OK9A 2KMSA 1OJYA 1TPMA 4AYMA 3NFPI 1OJVA 2RKYA 1QO6A 2IZ4A 1HFHA 3EJHA 1UOTP 1QGBA 4AYDA 3RJ3D 4LOTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FO8 C;  3M7P A;  1H2P P;  2G7I A;  2EHF A;  1OK2 A;  1C1Z A;  4MUC A;  1OK3 A;  2A55 A;  3ZD2 A;  5HZP B;  3OED C;  2XWJ I;  5JPM G;  2XRB A;  4AYE A;  1MD7 A;  2ERJ A;  2CKU A;  4C16 A;  3TVJ A;  4LOS A;  4AYI A;  2W80 A;  1Q3X A;  1NWV A;  2V8E A;  5HYT B;  1HFI A;  1VVD A;  2YRA A;  2XWB F;  4J38 B;  1G4G A;  4YNX A;  2MCY A;  4B2R A;  3IX0 A;  1GKN A;  1QUB A;  1TPG A;  2CG6 A;  2JGW A;  4F4O C;  1TPN A;  1O9A A;  1PPQ A;  5HYP A;  1GPZ A;  4JHS A;  1GHQ B;  3MQL A;  2XQW C;  2RKZ A;  1HCC A;  1E8B A;  4B2S A;  2B5I D;  4K12 A;  4FXG G;  2YBY A;  1OJW A;  2KRI A;  2UWN A;  3ZRZ A;  1LY2 A;  1FBR A;  2BZM A;  4ONT D;  4CSY A;  1H2Q P;  4PZ5 A;  2CG7 A;  3O8E B;  3KXV A;  3OP8 A;  2JRA A;  1SRZ A;  4DJZ A;  2XRD A;  3ERB A;  2W81 A;  3ZD1 A;  2RLQ A;  2RL0 A;  3GOV A;  3R62 A;  1OK1 A;  3T5O A;  4KKD A;  1ZJK A;  1SS2 A;  2IZ3 A;  2JGX A;  1U5M A;  3KZJ A;  3L89 M;  1CKL A;  5HYU B;  1H04 P;  3GXE A;  4WJG 2;  1H03 P;  1MD8 A;  2LOJ A;  3OXU D;  1G4F A;  1GKG A;  4ZH1 D;  1Z92 B;  2QY0 A;  3INB C;  1ELV A;  2O39 C;  1E88 A;  1E5G A;  2MCZ A;  1VVC A;  4A5W B;  5I0Q B;  2RLP A;  3IU3 I;  2EC3 A;  3SW0 X;  3CAL A;  4IGD A;  2WII C;  1OK9 A;  2KMS A;  1OJY A;  1TPM A;  4AYM A;  3NFP I;  1OJV A;  2RKY A;  1QO6 A;  2IZ4 A;  1HFH A;  3EJH A;  1UOT P;  1QGB A;  4AYD A;  3RJ3 D;  4LOT A; 
#chains in the Genus database with same CATH topology
 3WSY A;  5FO8 C;  3M7P A;  1H2P P;  2Y8S A;  2G7I A;  2Y8R A;  2EHF A;  5DN4 A;  1OK2 A;  4MSL A;  1C1Z A;  4MUC A;  1OK3 A;  2A55 A;  3ZD2 A;  5HZP B;  3OED C;  2I2L A;  2XWJ I;  3FGT A;  5JPM G;  2XRB A;  4AYE A;  1MD7 A;  2ERJ A;  2CKU A;  4C16 A;  3TVJ A;  4LOS A;  4AYI A;  2W80 A;  1Q3X A;  1NWV A;  2V8E A;  5HYT B;  1HFI A;  1VVD A;  2YRA A;  2XWB F;  4J38 B;  1G4G A;  4YNX A;  2MCY A;  4B2R A;  3IX0 A;  1GKN A;  1QUB A;  1TPG A;  2CG6 A;  2JGW A;  4F4O C;  1TPN A;  1O9A A;  1PPQ A;  4PO7 A;  5HYP A;  1GPZ A;  4JHS A;  1GHQ B;  3K3T A;  2XQW C;  3MQL A;  2RKZ A;  4APL A;  1HCC A;  1E8B A;  4B2S A;  2B5I D;  4K12 A;  2ZYC A;  4FXG G;  2YBY A;  1OJW A;  2KRI A;  2UWN A;  3WSX A;  3ZRZ A;  1LY2 A;  1FBR A;  2BZM A;  4ONT D;  4CSY A;  1H2Q P;  4PZ5 A;  2CG7 A;  3O8E B;  3ZLE A;  3KXV A;  3OP8 A;  2JRA A;  1SRZ A;  5DN5 A;  2XRD A;  3ERB A;  4BWC A;  4DJZ A;  2W81 A;  3ZD1 A;  2RLQ A;  2RL0 A;  3GOV A;  3R62 A;  1OK1 A;  3T5O A;  4KKD A;  1ZJK A;  1SS2 A;  2IZ3 A;  2JGX A;  1U5M A;  2X2Z A;  3KZJ A;  3L89 M;  1CKL A;  5HYU B;  1H04 P;  3GXE A;  4WJG 2;  1H03 P;  1MD8 A;  2LOJ A;  3OXU D;  1G4F A;  1GKG A;  3ZLD A;  4ZH1 D;  1Z92 B;  2QY0 A;  3INB C;  1ELV A;  2O39 C;  1E88 A;  1E5G A;  2MCZ A;  1VVC A;  4A5W B;  5I0Q B;  2RLP A;  3IU3 I;  3F6K A;  2EC3 A;  3NJA A;  3SW0 X;  3CAL A;  4IGD A;  2WII C;  1OK9 A;  2KMS A;  1OJY A;  1TPM A;  4YIZ A;  4N7E A;  2Y8T A;  4AYM A;  3NFP I;  1OJV A;  2RKY A;  1QO6 A;  2IZ4 A;  1HFH A;  3EJH A;  3FGR A;  1UOT P;  1QGB A;  3VWO A;  4AYD A;  3CI0 J;  3RJ3 D;  1RLH A;  4LOT A; 
#chains in the Genus database with same CATH homology
 5FO8 C;  3M7P A;  1H2P P;  2G7I A;  2EHF A;  1OK2 A;  1C1Z A;  4MUC A;  1OK3 A;  2A55 A;  3ZD2 A;  5HZP B;  3OED C;  2XWJ I;  5JPM G;  2XRB A;  4AYE A;  1MD7 A;  2ERJ A;  2CKU A;  4C16 A;  3TVJ A;  4LOS A;  4AYI A;  2W80 A;  1Q3X A;  1NWV A;  2V8E A;  5HYT B;  1HFI A;  1VVD A;  2YRA A;  2XWB F;  4J38 B;  1G4G A;  4YNX A;  2MCY A;  4B2R A;  3IX0 A;  1GKN A;  1QUB A;  1TPG A;  2CG6 A;  2JGW A;  4F4O C;  1TPN A;  1O9A A;  1PPQ A;  5HYP A;  1GPZ A;  4JHS A;  1GHQ B;  3MQL A;  2XQW C;  2RKZ A;  1HCC A;  1E8B A;  4B2S A;  2B5I D;  4K12 A;  4FXG G;  2YBY A;  1OJW A;  2KRI A;  2UWN A;  3ZRZ A;  1LY2 A;  1FBR A;  2BZM A;  4ONT D;  4CSY A;  1H2Q P;  4PZ5 A;  2CG7 A;  3O8E B;  3KXV A;  3OP8 A;  2JRA A;  1SRZ A;  4DJZ A;  2XRD A;  3ERB A;  2W81 A;  3ZD1 A;  2RLQ A;  2RL0 A;  3GOV A;  3R62 A;  1OK1 A;  3T5O A;  4KKD A;  1ZJK A;  1SS2 A;  2IZ3 A;  2JGX A;  1U5M A;  3KZJ A;  3L89 M;  1CKL A;  5HYU B;  1H04 P;  3GXE A;  4WJG 2;  1H03 P;  1MD8 A;  2LOJ A;  3OXU D;  1G4F A;  1GKG A;  4ZH1 D;  1Z92 B;  2QY0 A;  3INB C;  1ELV A;  2O39 C;  1E88 A;  1E5G A;  2MCZ A;  1VVC A;  4A5W B;  5I0Q B;  2RLP A;  3IU3 I;  2EC3 A;  3SW0 X;  3CAL A;  4IGD A;  2WII C;  1OK9 A;  2KMS A;  1OJY A;  1TPM A;  4AYM A;  3NFP I;  1OJV A;  2RKY A;  1QO6 A;  2IZ4 A;  1HFH A;  3EJH A;  1UOT P;  1QGB A;  4AYD A;  3RJ3 D;  4LOT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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