4MUCA

The 4th and 5th c-terminal domains of factor h related protein 1
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
123
structure length
123
Chain Sequence
TGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNGQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYLRTGESAEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Immune system
source organism Homo sapiens
publication title The Major Autoantibody Epitope on Factor H in Atypical Hemolytic Uremic Syndrome Is Structurally Different from Its Homologous Site in Factor H-related Protein 1, Supporting a Novel Model for Induction of Autoimmunity in This Disease.
pubmed doi rcsb
molecule keywords Complement factor H-related protein 1
total genus 21
structure length 123
sequence length 123
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4mucA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4mucA02
4FXGG 5HZPB 3CALA 2YBYA 3KZJA 1OJYA 3KXVA 2UWNA 2EC3A 1OJWA 3IU3I 3NFPI 2RKZA 2BZMA 4KKDA 3OEDC 1OK2A 1MD7A 1VVCA 4J38B 1H03P 2CKUA 1E88A 2W80A 5FO8C 4B2RA 3TVJA 1OJVA 4ZH1D 1HFIA 1QO6A 2JRAA 1MD8A 2B5ID 2IZ3A 2LOJA 3GOVA 2MCZA 4AYEA 1UOTP 3L89M 2XQWC 1G4FA 4DJZA 1TPMA 3M7PA 2XWBF 2V8EA 3RJ3D 1GPZA 2KMSA 4A5WB 2XWJI 3ZRZA 4LOSA 3ZD2A 2YRAA 4PZ5A 1Q3XA 1QUBA 4B2SA 2IZ4A 4AYMA 4WJG2 2EHFA 2RLQA 4AYIA 4MUCA 2W81A 1TPGA 1PPQA 1HFHA 3INBC 3GXEA 5HYUB 2QY0A 1QGBA 2JGXA 3ZD1A 1E5GA 2A55A 1OK3A 2CG6A 1GHQB 1FBRA 1U5MA 4IGDA 1SS2A 2O39C 5HYPA 2CG7A 2RL0A 1O9AA 3MQLA 5HYTB 1OK1A 4AYDA 3SW0X 1OK9A 4YNXA 1H2PP 1GKNA 1C1ZA 1HCCA 3O8EB 2G7IA 3OP8A 1GKGA 1NWVA 1Z92B 1TPNA 2MCYA 1G4GA 2KRIA 3T5OA 2ERJA 1CKLA 1ELVA 3OXUD 2RKYA 1SRZA 1VVDA 1E8BA 4F4OC 2XRBA 4LOTA 1ZJKA 3ERBA 4JHSA 4CSYA 1H04P 2RLPA 4C16A 3R62A 4K12A 5JPMG 1LY2A 5I0QB 2JGWA 3EJHA 4ONTD 1H2QP 2WIIC 2XRDA 3IX0A
chains in the Genus database with same CATH superfamily
4FXGG 5HZPB 4N7EA 3CALA 5DN4A 2YBYA 3KZJA 1OJYA 3KXVA 2UWNA 2EC3A 1OJWA 3IU3I 3NFPI 2RKZA 2BZMA 4KKDA 3OEDC 1OK2A 1MD7A 1VVCA 2I2LA 4J38B 3K3TA 1H03P 2CKUA 1E88A 2W80A 1RLHA 5FO8C 4B2RA 3TVJA 1OJVA 4ZH1D 1HFIA 1QO6A 2JRAA 1MD8A 5DN5A 2B5ID 3WSXA 2IZ3A 2LOJA 3GOVA 2MCZA 4AYEA 1UOTP 3L89M 2XQWC 1G4FA 4DJZA 1TPMA 3M7PA 4YIZA 2XWBF 2V8EA 3RJ3D 3WSYA 1GPZA 2KMSA 4A5WB 2XWJI 3ZRZA 4LOSA 3ZD2A 2YRAA 4PZ5A 1Q3XA 1QUBA 4B2SA 2IZ4A 4AYMA 4WJG2 2EHFA 2RLQA 4AYIA 4MUCA 2W81A 1TPGA 1PPQA 1HFHA 3INBC 2Y8SA 3GXEA 5HYUB 2QY0A 1QGBA 2JGXA 3ZD1A 1E5GA 2A55A 1OK3A 2Y8RA 2CG6A 1GHQB 1FBRA 1U5MA 4IGDA 1SS2A 3NJAA 2O39C 5HYPA 2CG7A 2RL0A 1O9AA 3MQLA 5HYTB 3ZLEA 3ZLDA 1OK1A 4PO7A 4AYDA 3SW0X 1OK9A 4YNXA 1H2PP 1GKNA 1C1ZA 1HCCA 3O8EB 2G7IA 3OP8A 3FGTA 1NWVA 1GKGA 1Z92B 1TPNA 2MCYA 3F6KA 4MSLA 1G4GA 2KRIA 3T5OA 2ZYCA 2ERJA 1CKLA 1ELVA 3OXUD 2RKYA 1SRZA 1VVDA 1E8BA 2Y8TA 4F4OC 2XRBA 4LOTA 1ZJKA 3ERBA 4JHSA 4CSYA 1H04P 2X2ZA 2RLPA 4C16A 3R62A 4K12A 5JPMG 3FGRA 1LY2A 5I0QB 2JGWA 4BWCA 3EJHA 4ONTD 1H2QP 3VWOA 4APLA 3CI0J 2WIIC 2XRDA 3IX0A
chains in the Genus database with same CATH topology
4FXGG 5HZPB 3CALA 2YBYA 3KZJA 1OJYA 3KXVA 2UWNA 2EC3A 1OJWA 3IU3I 3NFPI 2RKZA 2BZMA 4KKDA 3OEDC 1OK2A 1MD7A 1VVCA 4J38B 1H03P 2CKUA 1E88A 2W80A 5FO8C 4B2RA 3TVJA 1OJVA 4ZH1D 1HFIA 1QO6A 2JRAA 1MD8A 2B5ID 2IZ3A 2LOJA 3GOVA 2MCZA 4AYEA 1UOTP 3L89M 2XQWC 1G4FA 4DJZA 1TPMA 3M7PA 2XWBF 2V8EA 3RJ3D 1GPZA 2KMSA 4A5WB 2XWJI 3ZRZA 4LOSA 3ZD2A 2YRAA 4PZ5A 1Q3XA 1QUBA 4B2SA 2IZ4A 4AYMA 4WJG2 2EHFA 2RLQA 4AYIA 4MUCA 2W81A 1TPGA 1PPQA 1HFHA 3INBC 3GXEA 5HYUB 2QY0A 1QGBA 2JGXA 3ZD1A 1E5GA 2A55A 1OK3A 2CG6A 1GHQB 1FBRA 1U5MA 4IGDA 1SS2A 2O39C 5HYPA 2CG7A 2RL0A 1O9AA 3MQLA 5HYTB 1OK1A 4AYDA 3SW0X 1OK9A 4YNXA 1H2PP 1GKNA 1C1ZA 1HCCA 3O8EB 2G7IA 3OP8A 1GKGA 1NWVA 1Z92B 1TPNA 2MCYA 1G4GA 2KRIA 3T5OA 2ERJA 1CKLA 1ELVA 3OXUD 2RKYA 1SRZA 1VVDA 1E8BA 4F4OC 2XRBA 4LOTA 1ZJKA 3ERBA 4JHSA 4CSYA 1H04P 2RLPA 4C16A 3R62A 4K12A 5JPMG 1LY2A 5I0QB 2JGWA 3EJHA 4ONTD 1H2QP 2WIIC 2XRDA 3IX0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FXG G;  5HZP B;  3CAL A;  2YBY A;  3KZJ A;  1OJY A;  3KXV A;  2UWN A;  2EC3 A;  1OJW A;  3IU3 I;  3NFP I;  2RKZ A;  2BZM A;  4KKD A;  3OED C;  1OK2 A;  1MD7 A;  1VVC A;  4J38 B;  1H03 P;  2CKU A;  1E88 A;  2W80 A;  5FO8 C;  4B2R A;  3TVJ A;  1OJV A;  4ZH1 D;  1HFI A;  1QO6 A;  2JRA A;  1MD8 A;  2B5I D;  2IZ3 A;  2LOJ A;  3GOV A;  2MCZ A;  4AYE A;  1UOT P;  3L89 M;  2XQW C;  1G4F A;  4DJZ A;  1TPM A;  3M7P A;  2XWB F;  2V8E A;  3RJ3 D;  1GPZ A;  2KMS A;  4A5W B;  2XWJ I;  3ZRZ A;  4LOS A;  3ZD2 A;  2YRA A;  4PZ5 A;  1Q3X A;  1QUB A;  4B2S A;  2IZ4 A;  4AYM A;  4WJG 2;  2EHF A;  2RLQ A;  4AYI A;  4MUC A;  2W81 A;  1TPG A;  1PPQ A;  1HFH A;  3INB C;  3GXE A;  5HYU B;  2QY0 A;  1QGB A;  2JGX A;  3ZD1 A;  1E5G A;  2A55 A;  1OK3 A;  2CG6 A;  1GHQ B;  1FBR A;  1U5M A;  4IGD A;  1SS2 A;  2O39 C;  5HYP A;  2CG7 A;  2RL0 A;  1O9A A;  3MQL A;  5HYT B;  1OK1 A;  4AYD A;  3SW0 X;  1OK9 A;  4YNX A;  1H2P P;  1GKN A;  1C1Z A;  1HCC A;  3O8E B;  2G7I A;  3OP8 A;  1GKG A;  1NWV A;  1Z92 B;  1TPN A;  2MCY A;  1G4G A;  2KRI A;  3T5O A;  2ERJ A;  1CKL A;  1ELV A;  3OXU D;  2RKY A;  1SRZ A;  1VVD A;  1E8B A;  4F4O C;  2XRB A;  4LOT A;  1ZJK A;  3ERB A;  4JHS A;  4CSY A;  1H04 P;  2RLP A;  4C16 A;  3R62 A;  4K12 A;  5JPM G;  1LY2 A;  5I0Q B;  2JGW A;  3EJH A;  4ONT D;  1H2Q P;  2WII C;  2XRD A;  3IX0 A; 
#chains in the Genus database with same CATH topology
 4FXG G;  5HZP B;  4N7E A;  3CAL A;  5DN4 A;  2YBY A;  3KZJ A;  1OJY A;  3KXV A;  2UWN A;  2EC3 A;  1OJW A;  3IU3 I;  3NFP I;  2RKZ A;  2BZM A;  4KKD A;  3OED C;  1OK2 A;  1MD7 A;  1VVC A;  2I2L A;  4J38 B;  3K3T A;  1H03 P;  2CKU A;  1E88 A;  2W80 A;  1RLH A;  5FO8 C;  4B2R A;  3TVJ A;  1OJV A;  4ZH1 D;  1HFI A;  1QO6 A;  2JRA A;  1MD8 A;  5DN5 A;  2B5I D;  3WSX A;  2IZ3 A;  2LOJ A;  3GOV A;  2MCZ A;  4AYE A;  1UOT P;  3L89 M;  2XQW C;  1G4F A;  4DJZ A;  1TPM A;  3M7P A;  4YIZ A;  2XWB F;  2V8E A;  3RJ3 D;  3WSY A;  1GPZ A;  2KMS A;  4A5W B;  2XWJ I;  3ZRZ A;  4LOS A;  3ZD2 A;  2YRA A;  4PZ5 A;  1Q3X A;  1QUB A;  4B2S A;  2IZ4 A;  4AYM A;  4WJG 2;  2EHF A;  2RLQ A;  4AYI A;  4MUC A;  2W81 A;  1TPG A;  1PPQ A;  1HFH A;  3INB C;  2Y8S A;  3GXE A;  5HYU B;  2QY0 A;  1QGB A;  2JGX A;  3ZD1 A;  1E5G A;  2A55 A;  1OK3 A;  2Y8R A;  2CG6 A;  1GHQ B;  1FBR A;  1U5M A;  4IGD A;  1SS2 A;  3NJA A;  2O39 C;  5HYP A;  2CG7 A;  2RL0 A;  1O9A A;  3MQL A;  5HYT B;  3ZLE A;  3ZLD A;  1OK1 A;  4PO7 A;  4AYD A;  3SW0 X;  1OK9 A;  4YNX A;  1H2P P;  1GKN A;  1C1Z A;  1HCC A;  3O8E B;  2G7I A;  3OP8 A;  3FGT A;  1NWV A;  1GKG A;  1Z92 B;  1TPN A;  2MCY A;  3F6K A;  4MSL A;  1G4G A;  2KRI A;  3T5O A;  2ZYC A;  2ERJ A;  1CKL A;  1ELV A;  3OXU D;  2RKY A;  1SRZ A;  1VVD A;  1E8B A;  2Y8T A;  4F4O C;  2XRB A;  4LOT A;  1ZJK A;  3ERB A;  4JHS A;  4CSY A;  1H04 P;  2X2Z A;  2RLP A;  4C16 A;  3R62 A;  4K12 A;  5JPM G;  3FGR A;  1LY2 A;  5I0Q B;  2JGW A;  4BWC A;  3EJH A;  4ONT D;  1H2Q P;  3VWO A;  4APL A;  3CI0 J;  2WII C;  2XRD A;  3IX0 A; 
#chains in the Genus database with same CATH homology
 4FXG G;  5HZP B;  3CAL A;  2YBY A;  3KZJ A;  1OJY A;  3KXV A;  2UWN A;  2EC3 A;  1OJW A;  3IU3 I;  3NFP I;  2RKZ A;  2BZM A;  4KKD A;  3OED C;  1OK2 A;  1MD7 A;  1VVC A;  4J38 B;  1H03 P;  2CKU A;  1E88 A;  2W80 A;  5FO8 C;  4B2R A;  3TVJ A;  1OJV A;  4ZH1 D;  1HFI A;  1QO6 A;  2JRA A;  1MD8 A;  2B5I D;  2IZ3 A;  2LOJ A;  3GOV A;  2MCZ A;  4AYE A;  1UOT P;  3L89 M;  2XQW C;  1G4F A;  4DJZ A;  1TPM A;  3M7P A;  2XWB F;  2V8E A;  3RJ3 D;  1GPZ A;  2KMS A;  4A5W B;  2XWJ I;  3ZRZ A;  4LOS A;  3ZD2 A;  2YRA A;  4PZ5 A;  1Q3X A;  1QUB A;  4B2S A;  2IZ4 A;  4AYM A;  4WJG 2;  2EHF A;  2RLQ A;  4AYI A;  4MUC A;  2W81 A;  1TPG A;  1PPQ A;  1HFH A;  3INB C;  3GXE A;  5HYU B;  2QY0 A;  1QGB A;  2JGX A;  3ZD1 A;  1E5G A;  2A55 A;  1OK3 A;  2CG6 A;  1GHQ B;  1FBR A;  1U5M A;  4IGD A;  1SS2 A;  2O39 C;  5HYP A;  2CG7 A;  2RL0 A;  1O9A A;  3MQL A;  5HYT B;  1OK1 A;  4AYD A;  3SW0 X;  1OK9 A;  4YNX A;  1H2P P;  1GKN A;  1C1Z A;  1HCC A;  3O8E B;  2G7I A;  3OP8 A;  1GKG A;  1NWV A;  1Z92 B;  1TPN A;  2MCY A;  1G4G A;  2KRI A;  3T5O A;  2ERJ A;  1CKL A;  1ELV A;  3OXU D;  2RKY A;  1SRZ A;  1VVD A;  1E8B A;  4F4O C;  2XRB A;  4LOT A;  1ZJK A;  3ERB A;  4JHS A;  4CSY A;  1H04 P;  2RLP A;  4C16 A;  3R62 A;  4K12 A;  5JPM G;  1LY2 A;  5I0Q B;  2JGW A;  3EJH A;  4ONT D;  1H2Q P;  2WII C;  2XRD A;  3IX0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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