1FBRA

Fourth and fifth fibronectin type i module pair
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
93
structure length
93
Chain Sequence
AEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of a pair of fibronectin type 1 modules with fibrin binding activity.
pubmed doi rcsb
molecule tags Cell adhesion protein
source organism Homo sapiens
molecule keywords FIBRONECTIN
total genus 7
structure length 93
sequence length 93
ec nomenclature
pdb deposition date 1995-08-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00039 fn1 Fibronectin type I domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1fbrA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1fbrA02
1QGBA 1U5MA 2IZ4A 1OK9A 4J38B 4FXGG 1OJWA 3SW0X 3EJHA 2MCYA 1UOTP 2XRBA 2V8EA 2JGXA 2BZMA 2W80A 4A5WB 2EC3A 3ZRZA 4AYIA 1OK2A 2XRDA 2KMSA 1VVDA 2QY0A 1E8BA 2CG6A 1O9AA 4LOTA 2RKZA 3ZD1A 2KRIA 5JPMG 1GKNA 2XQWC 2A55A 4LOSA 2UWNA 4B2RA 1MD8A 1OK1A 1GHQB 1MD7A 4F4OC 1ELVA 2RL0A 2MCZA 3M7PA 3KZJA 2B5ID 2LOJA 2RLPA 3ZD2A 4IGDA 1H03P 3OXUD 2W81A 2YRAA 4WJG2 2O39C 3NFPI 4AYDA 2XWBF 2JGWA 1HFIA 1LY2A 1ZJKA 3GXEA 3IU3I 5FO8C 4MUCA 3OEDC 5HYUB 2CKUA 1NWVA 4CSYA 2IZ3A 1C1ZA 4PZ5A 1FBRA 1H2PP 1G4GA 1OK3A 1CKLA 3TVJA 2ERJA 3ERBA 4DJZA 1TPMA 2CG7A 1SS2A 2XWJI 3O8EB 5HYPA 1SRZA 1GPZA 4YNXA 1QO6A 1VVCA 1E88A 2G7IA 3INBC 4ZH1D 1TPGA 1GKGA 1H2QP 3GOVA 3MQLA 2RLQA 1HCCA 2YBYA 2JRAA 1PPQA 1G4FA 3L89M 5HYTB 4ONTD 1OJYA 1OJVA 4KKDA 1E5GA 3T5OA 4C16A 1TPNA 3CALA 2WIIC 1QUBA 3R62A 1H04P 5I0QB 3OP8A 4AYEA 1Z92B 5HZPB 4AYMA 3RJ3D 4JHSA 4K12A 1HFHA 1Q3XA 2RKYA 2EHFA 3IX0A 4B2SA 3KXVA
chains in the Genus database with same CATH superfamily
1QGBA 1U5MA 2IZ4A 1OK9A 4J38B 4FXGG 1OJWA 3SW0X 4PO7A 3EJHA 2MCYA 1UOTP 4APLA 2XRBA 2V8EA 2JGXA 2BZMA 2W80A 4A5WB 2EC3A 3ZRZA 3WSYA 4AYIA 2X2ZA 1OK2A 2XRDA 2KMSA 3WSXA 1VVDA 2QY0A 1E8BA 2CG6A 1O9AA 4LOTA 2RKZA 3ZD1A 2KRIA 5JPMG 1GKNA 2XQWC 2A55A 2ZYCA 4LOSA 2UWNA 1RLHA 3NJAA 4B2RA 1MD8A 1OK1A 1GHQB 1MD7A 3F6KA 4F4OC 1ELVA 2RL0A 2MCZA 3M7PA 2Y8SA 3KZJA 3ZLDA 2B5ID 2LOJA 2RLPA 3ZD2A 4IGDA 1H03P 3OXUD 2W81A 2YRAA 4WJG2 2O39C 3NFPI 4AYDA 2XWBF 2JGWA 1HFIA 1LY2A 1ZJKA 3K3TA 3GXEA 3IU3I 5FO8C 4MUCA 3OEDC 5HYUB 2CKUA 1NWVA 4CSYA 2IZ3A 1C1ZA 4PZ5A 4BWCA 1FBRA 1H2PP 2Y8TA 1G4GA 1OK3A 1CKLA 3TVJA 2ERJA 3ERBA 3VWOA 3ZLEA 4DJZA 1TPMA 2CG7A 1SS2A 2XWJI 5DN4A 3O8EB 5HYPA 1SRZA 1GPZA 4YNXA 1QO6A 4MSLA 5DN5A 1VVCA 3FGTA 2G7IA 3INBC 1E88A 4ZH1D 1TPGA 1GKGA 1H2QP 4YIZA 3GOVA 2Y8RA 3FGRA 2RLQA 3MQLA 1HCCA 2YBYA 2JRAA 1PPQA 1G4FA 3L89M 5HYTB 4ONTD 1OJYA 1OJVA 4KKDA 1E5GA 3T5OA 4C16A 1TPNA 3CALA 2WIIC 1QUBA 3R62A 1H04P 5I0QB 3OP8A 3CI0J 4AYEA 1Z92B 5HZPB 4AYMA 3RJ3D 4JHSA 4K12A 1HFHA 2I2LA 1Q3XA 2RKYA 2EHFA 3IX0A 4B2SA 4N7EA 3KXVA
chains in the Genus database with same CATH topology
1QGBA 1U5MA 2IZ4A 1OK9A 4J38B 4FXGG 1OJWA 3SW0X 3EJHA 2MCYA 1UOTP 2XRBA 2V8EA 2JGXA 2BZMA 2W80A 4A5WB 2EC3A 3ZRZA 4AYIA 1OK2A 2XRDA 2KMSA 1VVDA 2QY0A 1E8BA 2CG6A 1O9AA 4LOTA 2RKZA 3ZD1A 2KRIA 5JPMG 1GKNA 2XQWC 2A55A 4LOSA 2UWNA 4B2RA 1MD8A 1OK1A 1GHQB 1MD7A 4F4OC 1ELVA 2RL0A 2MCZA 3M7PA 3KZJA 2B5ID 2LOJA 2RLPA 3ZD2A 4IGDA 1H03P 3OXUD 2W81A 2YRAA 4WJG2 2O39C 3NFPI 4AYDA 2XWBF 2JGWA 1HFIA 1LY2A 1ZJKA 3GXEA 3IU3I 5FO8C 4MUCA 3OEDC 5HYUB 2CKUA 1NWVA 4CSYA 2IZ3A 1C1ZA 4PZ5A 1FBRA 1H2PP 1G4GA 1OK3A 1CKLA 3TVJA 2ERJA 3ERBA 4DJZA 1TPMA 2CG7A 1SS2A 2XWJI 3O8EB 5HYPA 1SRZA 1GPZA 4YNXA 1QO6A 1VVCA 1E88A 2G7IA 3INBC 4ZH1D 1TPGA 1GKGA 1H2QP 3GOVA 3MQLA 2RLQA 1HCCA 2YBYA 2JRAA 1PPQA 1G4FA 3L89M 5HYTB 4ONTD 1OJYA 1OJVA 4KKDA 1E5GA 3T5OA 4C16A 1TPNA 3CALA 2WIIC 1QUBA 3R62A 1H04P 5I0QB 3OP8A 4AYEA 1Z92B 5HZPB 4AYMA 3RJ3D 4JHSA 4K12A 1HFHA 1Q3XA 2RKYA 2EHFA 3IX0A 4B2SA 3KXVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QGB A;  1U5M A;  2IZ4 A;  1OK9 A;  4J38 B;  4FXG G;  1OJW A;  3SW0 X;  3EJH A;  2MCY A;  1UOT P;  2XRB A;  2V8E A;  2JGX A;  2BZM A;  2W80 A;  4A5W B;  2EC3 A;  3ZRZ A;  4AYI A;  1OK2 A;  2XRD A;  2KMS A;  1VVD A;  2QY0 A;  1E8B A;  2CG6 A;  1O9A A;  4LOT A;  2RKZ A;  3ZD1 A;  2KRI A;  5JPM G;  1GKN A;  2XQW C;  2A55 A;  4LOS A;  2UWN A;  4B2R A;  1MD8 A;  1OK1 A;  1GHQ B;  1MD7 A;  4F4O C;  1ELV A;  2RL0 A;  2MCZ A;  3M7P A;  3KZJ A;  2B5I D;  2LOJ A;  2RLP A;  3ZD2 A;  4IGD A;  1H03 P;  3OXU D;  2W81 A;  2YRA A;  4WJG 2;  2O39 C;  3NFP I;  4AYD A;  2XWB F;  2JGW A;  1HFI A;  1LY2 A;  1ZJK A;  3GXE A;  3IU3 I;  5FO8 C;  4MUC A;  3OED C;  5HYU B;  2CKU A;  1NWV A;  4CSY A;  2IZ3 A;  1C1Z A;  4PZ5 A;  1FBR A;  1H2P P;  1G4G A;  1OK3 A;  1CKL A;  3TVJ A;  2ERJ A;  3ERB A;  4DJZ A;  1TPM A;  2CG7 A;  1SS2 A;  2XWJ I;  3O8E B;  5HYP A;  1SRZ A;  1GPZ A;  4YNX A;  1QO6 A;  1VVC A;  1E88 A;  2G7I A;  3INB C;  4ZH1 D;  1TPG A;  1GKG A;  1H2Q P;  3GOV A;  3MQL A;  2RLQ A;  1HCC A;  2YBY A;  2JRA A;  1PPQ A;  1G4F A;  3L89 M;  5HYT B;  4ONT D;  1OJY A;  1OJV A;  4KKD A;  1E5G A;  3T5O A;  4C16 A;  1TPN A;  3CAL A;  2WII C;  1QUB A;  3R62 A;  1H04 P;  5I0Q B;  3OP8 A;  4AYE A;  1Z92 B;  5HZP B;  4AYM A;  3RJ3 D;  4JHS A;  4K12 A;  1HFH A;  1Q3X A;  2RKY A;  2EHF A;  3IX0 A;  4B2S A;  3KXV A; 
#chains in the Genus database with same CATH topology
 1QGB A;  1U5M A;  2IZ4 A;  1OK9 A;  4J38 B;  4FXG G;  1OJW A;  3SW0 X;  4PO7 A;  3EJH A;  2MCY A;  1UOT P;  4APL A;  2XRB A;  2V8E A;  2JGX A;  2BZM A;  2W80 A;  4A5W B;  2EC3 A;  3ZRZ A;  3WSY A;  4AYI A;  2X2Z A;  1OK2 A;  2XRD A;  2KMS A;  3WSX A;  1VVD A;  2QY0 A;  1E8B A;  2CG6 A;  1O9A A;  4LOT A;  2RKZ A;  3ZD1 A;  2KRI A;  5JPM G;  1GKN A;  2XQW C;  2A55 A;  2ZYC A;  4LOS A;  2UWN A;  1RLH A;  3NJA A;  4B2R A;  1MD8 A;  1OK1 A;  1GHQ B;  1MD7 A;  3F6K A;  4F4O C;  1ELV A;  2RL0 A;  2MCZ A;  3M7P A;  2Y8S A;  3KZJ A;  3ZLD A;  2B5I D;  2LOJ A;  2RLP A;  3ZD2 A;  4IGD A;  1H03 P;  3OXU D;  2W81 A;  2YRA A;  4WJG 2;  2O39 C;  3NFP I;  4AYD A;  2XWB F;  2JGW A;  1HFI A;  1LY2 A;  1ZJK A;  3K3T A;  3GXE A;  3IU3 I;  5FO8 C;  4MUC A;  3OED C;  5HYU B;  2CKU A;  1NWV A;  4CSY A;  2IZ3 A;  1C1Z A;  4PZ5 A;  4BWC A;  1FBR A;  1H2P P;  2Y8T A;  1G4G A;  1OK3 A;  1CKL A;  3TVJ A;  2ERJ A;  3ERB A;  3VWO A;  3ZLE A;  4DJZ A;  1TPM A;  2CG7 A;  1SS2 A;  2XWJ I;  5DN4 A;  3O8E B;  5HYP A;  1SRZ A;  1GPZ A;  4YNX A;  1QO6 A;  4MSL A;  5DN5 A;  1VVC A;  3FGT A;  2G7I A;  3INB C;  1E88 A;  4ZH1 D;  1TPG A;  1GKG A;  1H2Q P;  4YIZ A;  3GOV A;  2Y8R A;  3FGR A;  2RLQ A;  3MQL A;  1HCC A;  2YBY A;  2JRA A;  1PPQ A;  1G4F A;  3L89 M;  5HYT B;  4ONT D;  1OJY A;  1OJV A;  4KKD A;  1E5G A;  3T5O A;  4C16 A;  1TPN A;  3CAL A;  2WII C;  1QUB A;  3R62 A;  1H04 P;  5I0Q B;  3OP8 A;  3CI0 J;  4AYE A;  1Z92 B;  5HZP B;  4AYM A;  3RJ3 D;  4JHS A;  4K12 A;  1HFH A;  2I2L A;  1Q3X A;  2RKY A;  2EHF A;  3IX0 A;  4B2S A;  4N7E A;  3KXV A; 
#chains in the Genus database with same CATH homology
 1QGB A;  1U5M A;  2IZ4 A;  1OK9 A;  4J38 B;  4FXG G;  1OJW A;  3SW0 X;  3EJH A;  2MCY A;  1UOT P;  2XRB A;  2V8E A;  2JGX A;  2BZM A;  2W80 A;  4A5W B;  2EC3 A;  3ZRZ A;  4AYI A;  1OK2 A;  2XRD A;  2KMS A;  1VVD A;  2QY0 A;  1E8B A;  2CG6 A;  1O9A A;  4LOT A;  2RKZ A;  3ZD1 A;  2KRI A;  5JPM G;  1GKN A;  2XQW C;  2A55 A;  4LOS A;  2UWN A;  4B2R A;  1MD8 A;  1OK1 A;  1GHQ B;  1MD7 A;  4F4O C;  1ELV A;  2RL0 A;  2MCZ A;  3M7P A;  3KZJ A;  2B5I D;  2LOJ A;  2RLP A;  3ZD2 A;  4IGD A;  1H03 P;  3OXU D;  2W81 A;  2YRA A;  4WJG 2;  2O39 C;  3NFP I;  4AYD A;  2XWB F;  2JGW A;  1HFI A;  1LY2 A;  1ZJK A;  3GXE A;  3IU3 I;  5FO8 C;  4MUC A;  3OED C;  5HYU B;  2CKU A;  1NWV A;  4CSY A;  2IZ3 A;  1C1Z A;  4PZ5 A;  1FBR A;  1H2P P;  1G4G A;  1OK3 A;  1CKL A;  3TVJ A;  2ERJ A;  3ERB A;  4DJZ A;  1TPM A;  2CG7 A;  1SS2 A;  2XWJ I;  3O8E B;  5HYP A;  1SRZ A;  1GPZ A;  4YNX A;  1QO6 A;  1VVC A;  1E88 A;  2G7I A;  3INB C;  4ZH1 D;  1TPG A;  1GKG A;  1H2Q P;  3GOV A;  3MQL A;  2RLQ A;  1HCC A;  2YBY A;  2JRA A;  1PPQ A;  1G4F A;  3L89 M;  5HYT B;  4ONT D;  1OJY A;  1OJV A;  4KKD A;  1E5G A;  3T5O A;  4C16 A;  1TPN A;  3CAL A;  2WII C;  1QUB A;  3R62 A;  1H04 P;  5I0Q B;  3OP8 A;  4AYE A;  1Z92 B;  5HZP B;  4AYM A;  3RJ3 D;  4JHS A;  4K12 A;  1HFH A;  1Q3X A;  2RKY A;  2EHF A;  3IX0 A;  4B2S A;  3KXV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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