1FBRA

Fourth and fifth fibronectin type i module pair
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
93
structure length
93
Chain Sequence
AEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of a pair of fibronectin type 1 modules with fibrin binding activity.
pubmed doi rcsb
molecule tags Cell adhesion protein
source organism Homo sapiens
molecule keywords FIBRONECTIN
total genus 7
structure length 93
sequence length 93
ec nomenclature
pdb deposition date 1995-08-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00039 fn1 Fibronectin type I domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1fbrA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1fbrA02
1QUBA 1OJWA 3GOVA 2JRAA 5JPMG 2QY0A 4JHSA 1E5GA 2RKZA 1GKGA 4ZH1D 1OK3A 2XWJI 2XRDA 2G7IA 3O8EB 1E88A 1H04P 1MD8A 3ZRZA 2ERJA 3TVJA 2XQWC 4AYMA 1C1ZA 4DJZA 3IX0A 1GPZA 1Q3XA 3GXEA 2YRAA 4AYEA 3INBC 5FO8C 3ZD1A 3EJHA 1G4FA 2MCYA 3R62A 1HFHA 5HYPA 4B2SA 4ONTD 2O39C 2RLQA 1SRZA 1OK9A 2JGWA 1QO6A 2KMSA 3OEDC 3L89M 1G4GA 1ELVA 3OP8A 4FXGG 2EHFA 2MCZA 2RKYA 2RL0A 3KXVA 2IZ3A 1PPQA 4A5WB 2B5ID 2RLPA 4MUCA 4AYDA 4C16A 1GKNA 1OK2A 1HFIA 4KKDA 1ZJKA 2BZMA 4K12A 1O9AA 1UOTP 2JGXA 3CALA 1TPNA 2UWNA 3SW0X 3KZJA 1FBRA 2KRIA 1TPGA 2EC3A 2WIIC 4IGDA 2V8EA 2CG7A 4YNXA 1CKLA 5HYTB 2LOJA 4LOTA 1E8BA 1NWVA 1QGBA 2XRBA 3IU3I 2YBYA 5HZPB 1LY2A 1H03P 1OJYA 4AYIA 1GHQB 2XWBF 3OXUD 3ERBA 3M7PA 3T5OA 1VVCA 2CG6A 1Z92B 5HYUB 4PZ5A 1OK1A 4F4OC 4B2RA 5I0QB 3MQLA 1HCCA 1U5MA 1OJVA 1H2PP 2CKUA 2W81A 4J38B 1SS2A 4WJG2 4CSYA 2IZ4A 3ZD2A 2W80A 1MD7A 4LOSA 1H2QP 3RJ3D 1TPMA 1VVDA 3NFPI 2A55A
chains in the Genus database with same CATH superfamily
1QUBA 1OJWA 3GOVA 4MSLA 2JRAA 5JPMG 2QY0A 4JHSA 1E5GA 2RKZA 2X2ZA 3ZLDA 1GKGA 4ZH1D 4BWCA 1OK3A 2XWJI 2XRDA 3K3TA 2G7IA 3O8EB 1E88A 1H04P 4N7EA 1MD8A 3ZRZA 2ERJA 3TVJA 2XQWC 3F6KA 4AYMA 1C1ZA 4DJZA 3IX0A 1GPZA 1Q3XA 3GXEA 2YRAA 4AYEA 3INBC 5FO8C 3ZD1A 3EJHA 3VWOA 1G4FA 2MCYA 2Y8SA 3R62A 5DN4A 3NJAA 1HFHA 5HYPA 2Y8RA 4B2SA 4ONTD 2O39C 2RLQA 1SRZA 1OK9A 2JGWA 1QO6A 2KMSA 3OEDC 3L89M 1G4GA 2ZYCA 1ELVA 3OP8A 4FXGG 2EHFA 2MCZA 2RKYA 2Y8TA 2RL0A 3KXVA 2IZ3A 1PPQA 4A5WB 5DN5A 2B5ID 2RLPA 4MUCA 4YIZA 4AYDA 4C16A 1GKNA 1OK2A 1HFIA 4KKDA 1ZJKA 2BZMA 4K12A 1O9AA 1UOTP 2JGXA 3CALA 1TPNA 2UWNA 3SW0X 3KZJA 1FBRA 2KRIA 1TPGA 2EC3A 2WIIC 4IGDA 2V8EA 2CG7A 4YNXA 1CKLA 5HYTB 2LOJA 4LOTA 1E8BA 1NWVA 1QGBA 2XRBA 3IU3I 2YBYA 5HZPB 1LY2A 3FGTA 1H03P 1OJYA 4AYIA 3ZLEA 1GHQB 2XWBF 3OXUD 3ERBA 3M7PA 3T5OA 3WSXA 1VVCA 2CG6A 1Z92B 5HYUB 4PO7A 4PZ5A 1OK1A 4F4OC 4B2RA 3FGRA 5I0QB 3MQLA 1HCCA 1U5MA 1OJVA 1H2PP 2CKUA 2W81A 4J38B 4APLA 1RLHA 1SS2A 4WJG2 4CSYA 2IZ4A 3ZD2A 2W80A 1MD7A 4LOSA 1H2QP 3RJ3D 1TPMA 1VVDA 3NFPI 2A55A 3WSYA 2I2LA 3CI0J
chains in the Genus database with same CATH topology
1QUBA 1OJWA 3GOVA 2JRAA 5JPMG 2QY0A 4JHSA 1E5GA 2RKZA 1GKGA 4ZH1D 1OK3A 2XWJI 2XRDA 2G7IA 3O8EB 1E88A 1H04P 1MD8A 3ZRZA 2ERJA 3TVJA 2XQWC 4AYMA 1C1ZA 4DJZA 3IX0A 1GPZA 1Q3XA 3GXEA 2YRAA 4AYEA 3INBC 5FO8C 3ZD1A 3EJHA 1G4FA 2MCYA 3R62A 1HFHA 5HYPA 4B2SA 4ONTD 2O39C 2RLQA 1SRZA 1OK9A 2JGWA 1QO6A 2KMSA 3OEDC 3L89M 1G4GA 1ELVA 3OP8A 4FXGG 2EHFA 2MCZA 2RKYA 2RL0A 3KXVA 2IZ3A 1PPQA 4A5WB 2B5ID 2RLPA 4MUCA 4AYDA 4C16A 1GKNA 1OK2A 1HFIA 4KKDA 1ZJKA 2BZMA 4K12A 1O9AA 1UOTP 2JGXA 3CALA 1TPNA 2UWNA 3SW0X 3KZJA 1FBRA 2KRIA 1TPGA 2EC3A 2WIIC 4IGDA 2V8EA 2CG7A 4YNXA 1CKLA 5HYTB 2LOJA 4LOTA 1E8BA 1NWVA 1QGBA 2XRBA 3IU3I 2YBYA 5HZPB 1LY2A 1H03P 1OJYA 4AYIA 1GHQB 2XWBF 3OXUD 3ERBA 3M7PA 3T5OA 1VVCA 2CG6A 1Z92B 5HYUB 4PZ5A 1OK1A 4F4OC 4B2RA 5I0QB 3MQLA 1HCCA 1U5MA 1OJVA 1H2PP 2CKUA 2W81A 4J38B 1SS2A 4WJG2 4CSYA 2IZ4A 3ZD2A 2W80A 1MD7A 4LOSA 1H2QP 3RJ3D 1TPMA 1VVDA 3NFPI 2A55A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QUB A;  1OJW A;  3GOV A;  2JRA A;  5JPM G;  2QY0 A;  4JHS A;  1E5G A;  2RKZ A;  1GKG A;  4ZH1 D;  1OK3 A;  2XWJ I;  2XRD A;  2G7I A;  3O8E B;  1E88 A;  1H04 P;  1MD8 A;  3ZRZ A;  2ERJ A;  3TVJ A;  2XQW C;  4AYM A;  1C1Z A;  4DJZ A;  3IX0 A;  1GPZ A;  1Q3X A;  3GXE A;  2YRA A;  4AYE A;  3INB C;  5FO8 C;  3ZD1 A;  3EJH A;  1G4F A;  2MCY A;  3R62 A;  1HFH A;  5HYP A;  4B2S A;  4ONT D;  2O39 C;  2RLQ A;  1SRZ A;  1OK9 A;  2JGW A;  1QO6 A;  2KMS A;  3OED C;  3L89 M;  1G4G A;  1ELV A;  3OP8 A;  4FXG G;  2EHF A;  2MCZ A;  2RKY A;  2RL0 A;  3KXV A;  2IZ3 A;  1PPQ A;  4A5W B;  2B5I D;  2RLP A;  4MUC A;  4AYD A;  4C16 A;  1GKN A;  1OK2 A;  1HFI A;  4KKD A;  1ZJK A;  2BZM A;  4K12 A;  1O9A A;  1UOT P;  2JGX A;  3CAL A;  1TPN A;  2UWN A;  3SW0 X;  3KZJ A;  1FBR A;  2KRI A;  1TPG A;  2EC3 A;  2WII C;  4IGD A;  2V8E A;  2CG7 A;  4YNX A;  1CKL A;  5HYT B;  2LOJ A;  4LOT A;  1E8B A;  1NWV A;  1QGB A;  2XRB A;  3IU3 I;  2YBY A;  5HZP B;  1LY2 A;  1H03 P;  1OJY A;  4AYI A;  1GHQ B;  2XWB F;  3OXU D;  3ERB A;  3M7P A;  3T5O A;  1VVC A;  2CG6 A;  1Z92 B;  5HYU B;  4PZ5 A;  1OK1 A;  4F4O C;  4B2R A;  5I0Q B;  3MQL A;  1HCC A;  1U5M A;  1OJV A;  1H2P P;  2CKU A;  2W81 A;  4J38 B;  1SS2 A;  4WJG 2;  4CSY A;  2IZ4 A;  3ZD2 A;  2W80 A;  1MD7 A;  4LOS A;  1H2Q P;  3RJ3 D;  1TPM A;  1VVD A;  3NFP I;  2A55 A; 
#chains in the Genus database with same CATH topology
 1QUB A;  1OJW A;  3GOV A;  4MSL A;  2JRA A;  5JPM G;  2QY0 A;  4JHS A;  1E5G A;  2RKZ A;  2X2Z A;  3ZLD A;  1GKG A;  4ZH1 D;  4BWC A;  1OK3 A;  2XWJ I;  2XRD A;  3K3T A;  2G7I A;  3O8E B;  1E88 A;  1H04 P;  4N7E A;  1MD8 A;  3ZRZ A;  2ERJ A;  3TVJ A;  2XQW C;  3F6K A;  4AYM A;  1C1Z A;  4DJZ A;  3IX0 A;  1GPZ A;  1Q3X A;  3GXE A;  2YRA A;  4AYE A;  3INB C;  5FO8 C;  3ZD1 A;  3EJH A;  3VWO A;  1G4F A;  2MCY A;  2Y8S A;  3R62 A;  5DN4 A;  3NJA A;  1HFH A;  5HYP A;  2Y8R A;  4B2S A;  4ONT D;  2O39 C;  2RLQ A;  1SRZ A;  1OK9 A;  2JGW A;  1QO6 A;  2KMS A;  3OED C;  3L89 M;  1G4G A;  2ZYC A;  1ELV A;  3OP8 A;  4FXG G;  2EHF A;  2MCZ A;  2RKY A;  2Y8T A;  2RL0 A;  3KXV A;  2IZ3 A;  1PPQ A;  4A5W B;  5DN5 A;  2B5I D;  2RLP A;  4MUC A;  4YIZ A;  4AYD A;  4C16 A;  1GKN A;  1OK2 A;  1HFI A;  4KKD A;  1ZJK A;  2BZM A;  4K12 A;  1O9A A;  1UOT P;  2JGX A;  3CAL A;  1TPN A;  2UWN A;  3SW0 X;  3KZJ A;  1FBR A;  2KRI A;  1TPG A;  2EC3 A;  2WII C;  4IGD A;  2V8E A;  2CG7 A;  4YNX A;  1CKL A;  5HYT B;  2LOJ A;  4LOT A;  1E8B A;  1NWV A;  1QGB A;  2XRB A;  3IU3 I;  2YBY A;  5HZP B;  1LY2 A;  3FGT A;  1H03 P;  1OJY A;  4AYI A;  3ZLE A;  1GHQ B;  2XWB F;  3OXU D;  3ERB A;  3M7P A;  3T5O A;  3WSX A;  1VVC A;  2CG6 A;  1Z92 B;  5HYU B;  4PO7 A;  4PZ5 A;  1OK1 A;  4F4O C;  4B2R A;  3FGR A;  5I0Q B;  3MQL A;  1HCC A;  1U5M A;  1OJV A;  1H2P P;  2CKU A;  2W81 A;  4J38 B;  4APL A;  1RLH A;  1SS2 A;  4WJG 2;  4CSY A;  2IZ4 A;  3ZD2 A;  2W80 A;  1MD7 A;  4LOS A;  1H2Q P;  3RJ3 D;  1TPM A;  1VVD A;  3NFP I;  2A55 A;  3WSY A;  2I2L A;  3CI0 J; 
#chains in the Genus database with same CATH homology
 1QUB A;  1OJW A;  3GOV A;  2JRA A;  5JPM G;  2QY0 A;  4JHS A;  1E5G A;  2RKZ A;  1GKG A;  4ZH1 D;  1OK3 A;  2XWJ I;  2XRD A;  2G7I A;  3O8E B;  1E88 A;  1H04 P;  1MD8 A;  3ZRZ A;  2ERJ A;  3TVJ A;  2XQW C;  4AYM A;  1C1Z A;  4DJZ A;  3IX0 A;  1GPZ A;  1Q3X A;  3GXE A;  2YRA A;  4AYE A;  3INB C;  5FO8 C;  3ZD1 A;  3EJH A;  1G4F A;  2MCY A;  3R62 A;  1HFH A;  5HYP A;  4B2S A;  4ONT D;  2O39 C;  2RLQ A;  1SRZ A;  1OK9 A;  2JGW A;  1QO6 A;  2KMS A;  3OED C;  3L89 M;  1G4G A;  1ELV A;  3OP8 A;  4FXG G;  2EHF A;  2MCZ A;  2RKY A;  2RL0 A;  3KXV A;  2IZ3 A;  1PPQ A;  4A5W B;  2B5I D;  2RLP A;  4MUC A;  4AYD A;  4C16 A;  1GKN A;  1OK2 A;  1HFI A;  4KKD A;  1ZJK A;  2BZM A;  4K12 A;  1O9A A;  1UOT P;  2JGX A;  3CAL A;  1TPN A;  2UWN A;  3SW0 X;  3KZJ A;  1FBR A;  2KRI A;  1TPG A;  2EC3 A;  2WII C;  4IGD A;  2V8E A;  2CG7 A;  4YNX A;  1CKL A;  5HYT B;  2LOJ A;  4LOT A;  1E8B A;  1NWV A;  1QGB A;  2XRB A;  3IU3 I;  2YBY A;  5HZP B;  1LY2 A;  1H03 P;  1OJY A;  4AYI A;  1GHQ B;  2XWB F;  3OXU D;  3ERB A;  3M7P A;  3T5O A;  1VVC A;  2CG6 A;  1Z92 B;  5HYU B;  4PZ5 A;  1OK1 A;  4F4O C;  4B2R A;  5I0Q B;  3MQL A;  1HCC A;  1U5M A;  1OJV A;  1H2P P;  2CKU A;  2W81 A;  4J38 B;  1SS2 A;  4WJG 2;  4CSY A;  2IZ4 A;  3ZD2 A;  2W80 A;  1MD7 A;  4LOS A;  1H2Q P;  3RJ3 D;  1TPM A;  1VVD A;  3NFP I;  2A55 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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