1HCCA

Three-dimensional structure of a complement control protein module in solution
Total Genus 4

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
59
structure length
59
Chain Sequence
EGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLGEKWSHPPSCI

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
O2 (5-47)TIV4 (48-51)S6 (51-53)S1 (14-16)TIV1 (11-14)S7 (57-58)TIV3 (34-37)S3 (31-33)S5 (45-48)S4 (39-40)O1 (30-32)TIV2 (16-19)S2 (27-29)Updating...
connected with : NaN
molecule tags Glycoprotein
source organism Homo sapiens
publication title Three-dimensional structure of a complement control protein module in solution.
pubmed doi rcsb
molecule keywords 16TH COMPLEMENT CONTROL PROTEIN
total genus 4
structure length 59
sequence length 59
ec nomenclature
pdb deposition date 1990-11-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 1hccA00
2CG7A 1OK9A 3IU3I 2MCYA 1OK2A 1TPMA 2UWNA 3GXEA 3ZD1A 5I0QB 4LOTA 4F4OC 1G4GA 5FO8C 4JHSA 3NFPI 4IGDA 1E88A 1G4FA 1GHQB 4DJZA 1MD7A 1UOTP 3R62A 5HYUB 1OJVA 2ERJA 2KRIA 5HYPA 3KXVA 2EC3A 2RKYA 4B2SA 3ERBA 2WIIC 4YNXA 2YBYA 2RLQA 2IZ4A 1NWVA 2XWBF 2V8EA 1HFHA 1QGBA 3GOVA 2B5ID 2G7IA 3MQLA 1PPQA 1TPGA 2YRAA 2RL0A 2XRBA 1E5GA 1GPZA 3OXUD 4MUCA 2XRDA 3M7PA 4K12A 4PZ5A 2BZMA 1VVDA 1CKLA 4LOSA 2JGWA 2CKUA 4J38B 2RLPA 5JPMG 3OP8A 2QY0A 4AYIA 4B2RA 3ZRZA 3EJHA 3TVJA 2O39C 1OK1A 1ZJKA 1H2PP 2EHFA 2XQWC 3ZD2A 5HYTB 1OJYA 2W81A 2JRAA 3IX0A 3L89M 4CSYA 1E8BA 1H04P 1ELVA 3CALA 3KZJA 4C16A 2JGXA 2IZ3A 1GKGA 3O8EB 1Z92B 2LOJA 1U5MA 1LY2A 3INBC 1GKNA 2MCZA 1OK3A 1Q3XA 4AYMA 1QUBA 1OJWA 1H03P 1C1ZA 1HCCA 2RKZA 4WJG2 3OEDC 4AYDA 1TPNA 4ZH1D 1SS2A 2XWJI 1O9AA 4AYEA 5HZPB 2W80A 3T5OA 1HFIA 2CG6A 2A55A 1QO6A 2KMSA 1FBRA 1SRZA 4FXGG 4ONTD 1MD8A 1VVCA 3SW0X 4A5WB 3RJ3D 4KKDA 1H2QP
chains in the Genus database with same CATH superfamily
2CG7A 3F6KA 1OK9A 3IU3I 2MCYA 1OK2A 1TPMA 3WSYA 2UWNA 3GXEA 3ZD1A 5I0QB 4LOTA 4F4OC 2Y8RA 1G4GA 5FO8C 4JHSA 3NFPI 3FGTA 4IGDA 1E88A 1G4FA 1GHQB 4PO7A 4DJZA 1MD7A 1UOTP 3R62A 5HYUB 1OJVA 2ERJA 2KRIA 5HYPA 3KXVA 2EC3A 2RKYA 3K3TA 4B2SA 3ERBA 2WIIC 4YNXA 2YBYA 2RLQA 2IZ4A 1NWVA 2XWBF 2V8EA 1HFHA 1QGBA 3GOVA 2B5ID 2G7IA 1RLHA 3MQLA 1PPQA 1TPGA 2YRAA 2RL0A 2XRBA 1E5GA 1GPZA 3OXUD 4MUCA 2XRDA 3M7PA 4K12A 4PZ5A 2BZMA 3CI0J 1VVDA 1CKLA 3ZLDA 4LOSA 2JGWA 2CKUA 4J38B 2RLPA 5JPMG 3OP8A 3ZLEA 2QY0A 4AYIA 4B2RA 3ZRZA 3EJHA 3TVJA 2O39C 1OK1A 1ZJKA 1H2PP 2EHFA 2XQWC 2Y8SA 4YIZA 3ZD2A 5HYTB 1OJYA 2W81A 2JRAA 3IX0A 3L89M 4CSYA 1E8BA 1H04P 3NJAA 1ELVA 3CALA 3KZJA 4C16A 2JGXA 2IZ3A 1GKGA 3O8EB 1Z92B 2LOJA 1U5MA 1LY2A 3INBC 1GKNA 2MCZA 4MSLA 5DN5A 1OK3A 1Q3XA 4AYMA 1QUBA 1OJWA 1H03P 1C1ZA 1HCCA 2RKZA 2X2ZA 4N7EA 3WSXA 4WJG2 4APLA 3OEDC 4AYDA 1TPNA 4ZH1D 2I2LA 1SS2A 5DN4A 2XWJI 1O9AA 4AYEA 3VWOA 5HZPB 2W80A 2ZYCA 3T5OA 1HFIA 4BWCA 2CG6A 2A55A 1QO6A 2KMSA 1FBRA 1SRZA 4FXGG 4ONTD 1MD8A 1VVCA 3FGRA 3SW0X 4A5WB 3RJ3D 4KKDA 2Y8TA 1H2QP
chains in the Genus database with same CATH topology
2CG7A 1OK9A 3IU3I 2MCYA 1OK2A 1TPMA 2UWNA 3GXEA 3ZD1A 5I0QB 4LOTA 4F4OC 1G4GA 5FO8C 4JHSA 3NFPI 4IGDA 1E88A 1G4FA 1GHQB 4DJZA 1MD7A 1UOTP 3R62A 5HYUB 1OJVA 2ERJA 2KRIA 5HYPA 3KXVA 2EC3A 2RKYA 4B2SA 3ERBA 2WIIC 4YNXA 2YBYA 2RLQA 2IZ4A 1NWVA 2XWBF 2V8EA 1HFHA 1QGBA 3GOVA 2B5ID 2G7IA 3MQLA 1PPQA 1TPGA 2YRAA 2RL0A 2XRBA 1E5GA 1GPZA 3OXUD 4MUCA 2XRDA 3M7PA 4K12A 4PZ5A 2BZMA 1VVDA 1CKLA 4LOSA 2JGWA 2CKUA 4J38B 2RLPA 5JPMG 3OP8A 2QY0A 4AYIA 4B2RA 3ZRZA 3EJHA 3TVJA 2O39C 1OK1A 1ZJKA 1H2PP 2EHFA 2XQWC 3ZD2A 5HYTB 1OJYA 2W81A 2JRAA 3IX0A 3L89M 4CSYA 1E8BA 1H04P 1ELVA 3CALA 3KZJA 4C16A 2JGXA 2IZ3A 1GKGA 3O8EB 1Z92B 2LOJA 1U5MA 1LY2A 3INBC 1GKNA 2MCZA 1OK3A 1Q3XA 4AYMA 1QUBA 1OJWA 1H03P 1C1ZA 1HCCA 2RKZA 4WJG2 3OEDC 4AYDA 1TPNA 4ZH1D 1SS2A 2XWJI 1O9AA 4AYEA 5HZPB 2W80A 3T5OA 1HFIA 2CG6A 2A55A 1QO6A 2KMSA 1FBRA 1SRZA 4FXGG 4ONTD 1MD8A 1VVCA 3SW0X 4A5WB 3RJ3D 4KKDA 1H2QP
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CG7 A;  1OK9 A;  3IU3 I;  2MCY A;  1OK2 A;  1TPM A;  2UWN A;  3GXE A;  3ZD1 A;  5I0Q B;  4LOT A;  4F4O C;  1G4G A;  5FO8 C;  4JHS A;  3NFP I;  4IGD A;  1E88 A;  1G4F A;  1GHQ B;  4DJZ A;  1MD7 A;  1UOT P;  3R62 A;  5HYU B;  1OJV A;  2ERJ A;  2KRI A;  5HYP A;  3KXV A;  2EC3 A;  2RKY A;  4B2S A;  3ERB A;  2WII C;  4YNX A;  2YBY A;  2RLQ A;  2IZ4 A;  1NWV A;  2XWB F;  2V8E A;  1HFH A;  1QGB A;  3GOV A;  2B5I D;  2G7I A;  3MQL A;  1PPQ A;  1TPG A;  2YRA A;  2RL0 A;  2XRB A;  1E5G A;  1GPZ A;  3OXU D;  4MUC A;  2XRD A;  3M7P A;  4K12 A;  4PZ5 A;  2BZM A;  1VVD A;  1CKL A;  4LOS A;  2JGW A;  2CKU A;  4J38 B;  2RLP A;  5JPM G;  3OP8 A;  2QY0 A;  4AYI A;  4B2R A;  3ZRZ A;  3EJH A;  3TVJ A;  2O39 C;  1OK1 A;  1ZJK A;  1H2P P;  2EHF A;  2XQW C;  3ZD2 A;  5HYT B;  1OJY A;  2W81 A;  2JRA A;  3IX0 A;  3L89 M;  4CSY A;  1E8B A;  1H04 P;  1ELV A;  3CAL A;  3KZJ A;  4C16 A;  2JGX A;  2IZ3 A;  1GKG A;  3O8E B;  1Z92 B;  2LOJ A;  1U5M A;  1LY2 A;  3INB C;  1GKN A;  2MCZ A;  1OK3 A;  1Q3X A;  4AYM A;  1QUB A;  1OJW A;  1H03 P;  1C1Z A;  1HCC A;  2RKZ A;  4WJG 2;  3OED C;  4AYD A;  1TPN A;  4ZH1 D;  1SS2 A;  2XWJ I;  1O9A A;  4AYE A;  5HZP B;  2W80 A;  3T5O A;  1HFI A;  2CG6 A;  2A55 A;  1QO6 A;  2KMS A;  1FBR A;  1SRZ A;  4FXG G;  4ONT D;  1MD8 A;  1VVC A;  3SW0 X;  4A5W B;  3RJ3 D;  4KKD A;  1H2Q P; 
#chains in the Genus database with same CATH topology
 2CG7 A;  3F6K A;  1OK9 A;  3IU3 I;  2MCY A;  1OK2 A;  1TPM A;  3WSY A;  2UWN A;  3GXE A;  3ZD1 A;  5I0Q B;  4LOT A;  4F4O C;  2Y8R A;  1G4G A;  5FO8 C;  4JHS A;  3NFP I;  3FGT A;  4IGD A;  1E88 A;  1G4F A;  1GHQ B;  4PO7 A;  4DJZ A;  1MD7 A;  1UOT P;  3R62 A;  5HYU B;  1OJV A;  2ERJ A;  2KRI A;  5HYP A;  3KXV A;  2EC3 A;  2RKY A;  3K3T A;  4B2S A;  3ERB A;  2WII C;  4YNX A;  2YBY A;  2RLQ A;  2IZ4 A;  1NWV A;  2XWB F;  2V8E A;  1HFH A;  1QGB A;  3GOV A;  2B5I D;  2G7I A;  1RLH A;  3MQL A;  1PPQ A;  1TPG A;  2YRA A;  2RL0 A;  2XRB A;  1E5G A;  1GPZ A;  3OXU D;  4MUC A;  2XRD A;  3M7P A;  4K12 A;  4PZ5 A;  2BZM A;  3CI0 J;  1VVD A;  1CKL A;  3ZLD A;  4LOS A;  2JGW A;  2CKU A;  4J38 B;  2RLP A;  5JPM G;  3OP8 A;  3ZLE A;  2QY0 A;  4AYI A;  4B2R A;  3ZRZ A;  3EJH A;  3TVJ A;  2O39 C;  1OK1 A;  1ZJK A;  1H2P P;  2EHF A;  2XQW C;  2Y8S A;  4YIZ A;  3ZD2 A;  5HYT B;  1OJY A;  2W81 A;  2JRA A;  3IX0 A;  3L89 M;  4CSY A;  1E8B A;  1H04 P;  3NJA A;  1ELV A;  3CAL A;  3KZJ A;  4C16 A;  2JGX A;  2IZ3 A;  1GKG A;  3O8E B;  1Z92 B;  2LOJ A;  1U5M A;  1LY2 A;  3INB C;  1GKN A;  2MCZ A;  4MSL A;  5DN5 A;  1OK3 A;  1Q3X A;  4AYM A;  1QUB A;  1OJW A;  1H03 P;  1C1Z A;  1HCC A;  2RKZ A;  2X2Z A;  4N7E A;  3WSX A;  4WJG 2;  4APL A;  3OED C;  4AYD A;  1TPN A;  4ZH1 D;  2I2L A;  1SS2 A;  5DN4 A;  2XWJ I;  1O9A A;  4AYE A;  3VWO A;  5HZP B;  2W80 A;  2ZYC A;  3T5O A;  1HFI A;  4BWC A;  2CG6 A;  2A55 A;  1QO6 A;  2KMS A;  1FBR A;  1SRZ A;  4FXG G;  4ONT D;  1MD8 A;  1VVC A;  3FGR A;  3SW0 X;  4A5W B;  3RJ3 D;  4KKD A;  2Y8T A;  1H2Q P; 
#chains in the Genus database with same CATH homology
 2CG7 A;  1OK9 A;  3IU3 I;  2MCY A;  1OK2 A;  1TPM A;  2UWN A;  3GXE A;  3ZD1 A;  5I0Q B;  4LOT A;  4F4O C;  1G4G A;  5FO8 C;  4JHS A;  3NFP I;  4IGD A;  1E88 A;  1G4F A;  1GHQ B;  4DJZ A;  1MD7 A;  1UOT P;  3R62 A;  5HYU B;  1OJV A;  2ERJ A;  2KRI A;  5HYP A;  3KXV A;  2EC3 A;  2RKY A;  4B2S A;  3ERB A;  2WII C;  4YNX A;  2YBY A;  2RLQ A;  2IZ4 A;  1NWV A;  2XWB F;  2V8E A;  1HFH A;  1QGB A;  3GOV A;  2B5I D;  2G7I A;  3MQL A;  1PPQ A;  1TPG A;  2YRA A;  2RL0 A;  2XRB A;  1E5G A;  1GPZ A;  3OXU D;  4MUC A;  2XRD A;  3M7P A;  4K12 A;  4PZ5 A;  2BZM A;  1VVD A;  1CKL A;  4LOS A;  2JGW A;  2CKU A;  4J38 B;  2RLP A;  5JPM G;  3OP8 A;  2QY0 A;  4AYI A;  4B2R A;  3ZRZ A;  3EJH A;  3TVJ A;  2O39 C;  1OK1 A;  1ZJK A;  1H2P P;  2EHF A;  2XQW C;  3ZD2 A;  5HYT B;  1OJY A;  2W81 A;  2JRA A;  3IX0 A;  3L89 M;  4CSY A;  1E8B A;  1H04 P;  1ELV A;  3CAL A;  3KZJ A;  4C16 A;  2JGX A;  2IZ3 A;  1GKG A;  3O8E B;  1Z92 B;  2LOJ A;  1U5M A;  1LY2 A;  3INB C;  1GKN A;  2MCZ A;  1OK3 A;  1Q3X A;  4AYM A;  1QUB A;  1OJW A;  1H03 P;  1C1Z A;  1HCC A;  2RKZ A;  4WJG 2;  3OED C;  4AYD A;  1TPN A;  4ZH1 D;  1SS2 A;  2XWJ I;  1O9A A;  4AYE A;  5HZP B;  2W80 A;  3T5O A;  1HFI A;  2CG6 A;  2A55 A;  1QO6 A;  2KMS A;  1FBR A;  1SRZ A;  4FXG G;  4ONT D;  1MD8 A;  1VVC A;  3SW0 X;  4A5W B;  3RJ3 D;  4KKD A;  1H2Q P; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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