2MCZA

Cr1 sushi domains 1 and 2
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
122
structure length
122
Chain Sequence
QCNAPEWLPFARPTQLTDEFEFPIGTYLNYECRPGYSGRPFSIICLKNSVWTGAKDRCRRKSCRNPPDPVNGMVHVIKGIQFGSQIKYSCTKGYRLIGSSSATCIISGDTVIWDQETPICDR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Using Mutagenesis and Structural Biology to Map the Binding Site for the Plasmodium falciparum Merozoite Protein PfRh4 on the Human Immune Adherence Receptor.
pubmed doi rcsb
molecule tags Immune system
source organism Homo sapiens
molecule keywords Complement receptor type 1
total genus 12
structure length 122
sequence length 122
ec nomenclature
pdb deposition date 2013-08-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2mczA02
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2mczA01
2BZMA 1HFHA 1Z92B 2UWNA 1ZJKA 2XWBF 4LOTA 2XRDA 2EC3A 3GXEA 2YRAA 3TVJA 1TPGA 1GPZA 3M7PA 3MQLA 3INBC 2G7IA 5HYTB 1C1ZA 2JRAA 2W81A 1VVDA 1E8BA 1OK3A 1G4GA 3OEDC 4ONTD 1PPQA 1Q3XA 1QO6A 4AYMA 3IX0A 1OK1A 3ZD1A 2IZ4A 3O8EB 1ELVA 3RJ3D 4C16A 4A5WB 2RL0A 4K12A 1H2QP 3EJHA 5FO8C 2EHFA 3L89M 2MCZA 1HCCA 2RKZA 3CALA 2ERJA 4DJZA 2YBYA 1MD8A 1GKGA 1GKNA 2RKYA 4KKDA 3GOVA 2KRIA 4LOSA 1E5GA 1UOTP 3IU3I 2A55A 5HZPB 4JHSA 4B2SA 1SS2A 1TPNA 2RLQA 2WIIC 2RLPA 2CG6A 2B5ID 1H03P 4WJG2 3ZRZA 1TPMA 4AYIA 2KMSA 3ZD2A 1OK9A 1QUBA 1OJWA 2XRBA 3NFPI 3T5OA 1OK2A 4J38B 1QGBA 2W80A 5HYPA 4AYEA 1H2PP 2JGXA 1FBRA 4MUCA 2JGWA 4B2RA 4IGDA 4CSYA 3ERBA 2IZ3A 2V8EA 2CKUA 1H04P 5I0QB 2LOJA 3SW0X 2O39C 4PZ5A 3OP8A 3R62A 5JPMG 1VVCA 1HFIA 5HYUB 4FXGG 1E88A 1SRZA 2CG7A 4F4OC 2MCYA 3KXVA 4ZH1D 1CKLA 1G4FA 3KZJA 2XWJI 2XQWC 1GHQB 3OXUD 1MD7A 1O9AA 4AYDA 1LY2A 1U5MA 4YNXA 2QY0A 1OJYA 1OJVA 1NWVA
chains in the Genus database with same CATH superfamily
3K3TA 2BZMA 1HFHA 3CI0J 3FGTA 1Z92B 2UWNA 1ZJKA 3F6KA 2XWBF 4LOTA 4APLA 2XRDA 2EC3A 3GXEA 2YRAA 3TVJA 1TPGA 1GPZA 3M7PA 3MQLA 3INBC 2G7IA 5HYTB 1C1ZA 2JRAA 2W81A 1RLHA 1E8BA 1VVDA 3VWOA 1OK3A 1G4GA 3OEDC 4ONTD 2Y8SA 1PPQA 1Q3XA 1QO6A 4AYMA 2ZYCA 3IX0A 3WSYA 1OK1A 3FGRA 2Y8TA 3ZD1A 2IZ4A 3O8EB 4MSLA 1ELVA 3RJ3D 4C16A 4A5WB 2RL0A 4K12A 1H2QP 3EJHA 5FO8C 2EHFA 3L89M 2MCZA 1HCCA 2RKZA 3CALA 2ERJA 4DJZA 2YBYA 1MD8A 1GKGA 1GKNA 2RKYA 4KKDA 5DN5A 3GOVA 2KRIA 4LOSA 4YIZA 1E5GA 1UOTP 3IU3I 2A55A 4PO7A 5HZPB 4JHSA 4B2SA 1SS2A 1TPNA 2RLQA 2WIIC 2RLPA 2CG6A 2B5ID 1H03P 4WJG2 3ZRZA 2Y8RA 1TPMA 4AYIA 2KMSA 3ZD2A 1OK9A 1QUBA 1OJWA 2XRBA 3NFPI 3T5OA 1OK2A 4J38B 1QGBA 2W80A 3ZLEA 4AYEA 5HYPA 1H2PP 2JGXA 4N7EA 1FBRA 4MUCA 3NJAA 2JGWA 3ZLDA 4IGDA 4B2RA 4CSYA 3ERBA 2IZ3A 2V8EA 2CKUA 1H04P 5I0QB 2LOJA 2I2LA 3SW0X 2O39C 4PZ5A 3OP8A 3R62A 5JPMG 2X2ZA 1VVCA 1HFIA 5HYUB 4FXGG 1E88A 1SRZA 2CG7A 5DN4A 4F4OC 2MCYA 3KXVA 4ZH1D 1CKLA 1G4FA 3KZJA 2XWJI 2XQWC 1GHQB 4BWCA 3OXUD 1MD7A 1O9AA 3WSXA 4AYDA 1LY2A 1U5MA 4YNXA 2QY0A 1OJYA 1OJVA 1NWVA
chains in the Genus database with same CATH topology
2BZMA 1HFHA 1Z92B 2UWNA 1ZJKA 2XWBF 4LOTA 2XRDA 2EC3A 3GXEA 2YRAA 3TVJA 1TPGA 1GPZA 3M7PA 3MQLA 3INBC 2G7IA 5HYTB 1C1ZA 2JRAA 2W81A 1VVDA 1E8BA 1OK3A 1G4GA 3OEDC 4ONTD 1PPQA 1Q3XA 1QO6A 4AYMA 3IX0A 1OK1A 3ZD1A 2IZ4A 3O8EB 1ELVA 3RJ3D 4C16A 4A5WB 2RL0A 4K12A 1H2QP 3EJHA 5FO8C 2EHFA 3L89M 2MCZA 1HCCA 2RKZA 3CALA 2ERJA 4DJZA 2YBYA 1MD8A 1GKGA 1GKNA 2RKYA 4KKDA 3GOVA 2KRIA 4LOSA 1E5GA 1UOTP 3IU3I 2A55A 5HZPB 4JHSA 4B2SA 1SS2A 1TPNA 2RLQA 2WIIC 2RLPA 2CG6A 2B5ID 1H03P 4WJG2 3ZRZA 1TPMA 4AYIA 2KMSA 3ZD2A 1OK9A 1QUBA 1OJWA 2XRBA 3NFPI 3T5OA 1OK2A 4J38B 1QGBA 2W80A 5HYPA 4AYEA 1H2PP 2JGXA 1FBRA 4MUCA 2JGWA 4B2RA 4IGDA 4CSYA 3ERBA 2IZ3A 2V8EA 2CKUA 1H04P 5I0QB 2LOJA 3SW0X 2O39C 4PZ5A 3OP8A 3R62A 5JPMG 1VVCA 1HFIA 5HYUB 4FXGG 1E88A 1SRZA 2CG7A 4F4OC 2MCYA 3KXVA 4ZH1D 1CKLA 1G4FA 3KZJA 2XWJI 2XQWC 1GHQB 3OXUD 1MD7A 1O9AA 4AYDA 1LY2A 1U5MA 4YNXA 2QY0A 1OJYA 1OJVA 1NWVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BZM A;  1HFH A;  1Z92 B;  2UWN A;  1ZJK A;  2XWB F;  4LOT A;  2XRD A;  2EC3 A;  3GXE A;  2YRA A;  3TVJ A;  1TPG A;  1GPZ A;  3M7P A;  3MQL A;  3INB C;  2G7I A;  5HYT B;  1C1Z A;  2JRA A;  2W81 A;  1VVD A;  1E8B A;  1OK3 A;  1G4G A;  3OED C;  4ONT D;  1PPQ A;  1Q3X A;  1QO6 A;  4AYM A;  3IX0 A;  1OK1 A;  3ZD1 A;  2IZ4 A;  3O8E B;  1ELV A;  3RJ3 D;  4C16 A;  4A5W B;  2RL0 A;  4K12 A;  1H2Q P;  3EJH A;  5FO8 C;  2EHF A;  3L89 M;  2MCZ A;  1HCC A;  2RKZ A;  3CAL A;  2ERJ A;  4DJZ A;  2YBY A;  1MD8 A;  1GKG A;  1GKN A;  2RKY A;  4KKD A;  3GOV A;  2KRI A;  4LOS A;  1E5G A;  1UOT P;  3IU3 I;  2A55 A;  5HZP B;  4JHS A;  4B2S A;  1SS2 A;  1TPN A;  2RLQ A;  2WII C;  2RLP A;  2CG6 A;  2B5I D;  1H03 P;  4WJG 2;  3ZRZ A;  1TPM A;  4AYI A;  2KMS A;  3ZD2 A;  1OK9 A;  1QUB A;  1OJW A;  2XRB A;  3NFP I;  3T5O A;  1OK2 A;  4J38 B;  1QGB A;  2W80 A;  5HYP A;  4AYE A;  1H2P P;  2JGX A;  1FBR A;  4MUC A;  2JGW A;  4B2R A;  4IGD A;  4CSY A;  3ERB A;  2IZ3 A;  2V8E A;  2CKU A;  1H04 P;  5I0Q B;  2LOJ A;  3SW0 X;  2O39 C;  4PZ5 A;  3OP8 A;  3R62 A;  5JPM G;  1VVC A;  1HFI A;  5HYU B;  4FXG G;  1E88 A;  1SRZ A;  2CG7 A;  4F4O C;  2MCY A;  3KXV A;  4ZH1 D;  1CKL A;  1G4F A;  3KZJ A;  2XWJ I;  2XQW C;  1GHQ B;  3OXU D;  1MD7 A;  1O9A A;  4AYD A;  1LY2 A;  1U5M A;  4YNX A;  2QY0 A;  1OJY A;  1OJV A;  1NWV A; 
#chains in the Genus database with same CATH topology
 3K3T A;  2BZM A;  1HFH A;  3CI0 J;  3FGT A;  1Z92 B;  2UWN A;  1ZJK A;  3F6K A;  2XWB F;  4LOT A;  4APL A;  2XRD A;  2EC3 A;  3GXE A;  2YRA A;  3TVJ A;  1TPG A;  1GPZ A;  3M7P A;  3MQL A;  3INB C;  2G7I A;  5HYT B;  1C1Z A;  2JRA A;  2W81 A;  1RLH A;  1E8B A;  1VVD A;  3VWO A;  1OK3 A;  1G4G A;  3OED C;  4ONT D;  2Y8S A;  1PPQ A;  1Q3X A;  1QO6 A;  4AYM A;  2ZYC A;  3IX0 A;  3WSY A;  1OK1 A;  3FGR A;  2Y8T A;  3ZD1 A;  2IZ4 A;  3O8E B;  4MSL A;  1ELV A;  3RJ3 D;  4C16 A;  4A5W B;  2RL0 A;  4K12 A;  1H2Q P;  3EJH A;  5FO8 C;  2EHF A;  3L89 M;  2MCZ A;  1HCC A;  2RKZ A;  3CAL A;  2ERJ A;  4DJZ A;  2YBY A;  1MD8 A;  1GKG A;  1GKN A;  2RKY A;  4KKD A;  5DN5 A;  3GOV A;  2KRI A;  4LOS A;  4YIZ A;  1E5G A;  1UOT P;  3IU3 I;  2A55 A;  4PO7 A;  5HZP B;  4JHS A;  4B2S A;  1SS2 A;  1TPN A;  2RLQ A;  2WII C;  2RLP A;  2CG6 A;  2B5I D;  1H03 P;  4WJG 2;  3ZRZ A;  2Y8R A;  1TPM A;  4AYI A;  2KMS A;  3ZD2 A;  1OK9 A;  1QUB A;  1OJW A;  2XRB A;  3NFP I;  3T5O A;  1OK2 A;  4J38 B;  1QGB A;  2W80 A;  3ZLE A;  4AYE A;  5HYP A;  1H2P P;  2JGX A;  4N7E A;  1FBR A;  4MUC A;  3NJA A;  2JGW A;  3ZLD A;  4IGD A;  4B2R A;  4CSY A;  3ERB A;  2IZ3 A;  2V8E A;  2CKU A;  1H04 P;  5I0Q B;  2LOJ A;  2I2L A;  3SW0 X;  2O39 C;  4PZ5 A;  3OP8 A;  3R62 A;  5JPM G;  2X2Z A;  1VVC A;  1HFI A;  5HYU B;  4FXG G;  1E88 A;  1SRZ A;  2CG7 A;  5DN4 A;  4F4O C;  2MCY A;  3KXV A;  4ZH1 D;  1CKL A;  1G4F A;  3KZJ A;  2XWJ I;  2XQW C;  1GHQ B;  4BWC A;  3OXU D;  1MD7 A;  1O9A A;  3WSX A;  4AYD A;  1LY2 A;  1U5M A;  4YNX A;  2QY0 A;  1OJY A;  1OJV A;  1NWV A; 
#chains in the Genus database with same CATH homology
 2BZM A;  1HFH A;  1Z92 B;  2UWN A;  1ZJK A;  2XWB F;  4LOT A;  2XRD A;  2EC3 A;  3GXE A;  2YRA A;  3TVJ A;  1TPG A;  1GPZ A;  3M7P A;  3MQL A;  3INB C;  2G7I A;  5HYT B;  1C1Z A;  2JRA A;  2W81 A;  1VVD A;  1E8B A;  1OK3 A;  1G4G A;  3OED C;  4ONT D;  1PPQ A;  1Q3X A;  1QO6 A;  4AYM A;  3IX0 A;  1OK1 A;  3ZD1 A;  2IZ4 A;  3O8E B;  1ELV A;  3RJ3 D;  4C16 A;  4A5W B;  2RL0 A;  4K12 A;  1H2Q P;  3EJH A;  5FO8 C;  2EHF A;  3L89 M;  2MCZ A;  1HCC A;  2RKZ A;  3CAL A;  2ERJ A;  4DJZ A;  2YBY A;  1MD8 A;  1GKG A;  1GKN A;  2RKY A;  4KKD A;  3GOV A;  2KRI A;  4LOS A;  1E5G A;  1UOT P;  3IU3 I;  2A55 A;  5HZP B;  4JHS A;  4B2S A;  1SS2 A;  1TPN A;  2RLQ A;  2WII C;  2RLP A;  2CG6 A;  2B5I D;  1H03 P;  4WJG 2;  3ZRZ A;  1TPM A;  4AYI A;  2KMS A;  3ZD2 A;  1OK9 A;  1QUB A;  1OJW A;  2XRB A;  3NFP I;  3T5O A;  1OK2 A;  4J38 B;  1QGB A;  2W80 A;  5HYP A;  4AYE A;  1H2P P;  2JGX A;  1FBR A;  4MUC A;  2JGW A;  4B2R A;  4IGD A;  4CSY A;  3ERB A;  2IZ3 A;  2V8E A;  2CKU A;  1H04 P;  5I0Q B;  2LOJ A;  3SW0 X;  2O39 C;  4PZ5 A;  3OP8 A;  3R62 A;  5JPM G;  1VVC A;  1HFI A;  5HYU B;  4FXG G;  1E88 A;  1SRZ A;  2CG7 A;  4F4O C;  2MCY A;  3KXV A;  4ZH1 D;  1CKL A;  1G4F A;  3KZJ A;  2XWJ I;  2XQW C;  1GHQ B;  3OXU D;  1MD7 A;  1O9A A;  4AYD A;  1LY2 A;  1U5M A;  4YNX A;  2QY0 A;  1OJY A;  1OJV A;  1NWV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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