3UNVA

Pantoea agglomerans phenylalanine aminomutase
Total Genus 203

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
203
sequence length
514
structure length
513
Chain Sequence
SFHISSGKDISLEEIARAARDHQPVTLHDEVVNRVTRSRSILESMVSDERVIYGVNTSMGGFVNYIVPIAKASELQNNLINAVATNVGKYFDDTTVRATMLARIVSLSRGNSAISIVNFKKLIEIYNQGIVPCIPEKGSLGDLGPLAAIALVCTGQWKARYQGEQMSGAMALEKAGISPMELSFKEGLALINGTSAMVGLGVLLYDEVKRLFDTYLTVTSLSIEGLHGKTKPFEPAVHRMKPHQGQLEVATTIWETLADSSLAVNEHEVEKLIAEEMDGLVKASNHQIEDAYSIRCTPQILGPVADTLKNIKQTLTNELNSSNDNPLIDQTTEEVFHNGHFHGQYVSMAMDHLNIALVTMMNLANRRIDRFMDKSNSNGLPPFLCAENAGLRLGLMGGQFMTASITAESRASCMPMSIQSLSTTGDFQDIVSFGLVAARRVREQLKNLKYVFSFELLCACQAVDIRGTAGLSKRTRALYDKTRTLVPYLEEDKTISDYIESIAQTVLTKNSDI

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS1 (27-29)AH1 (37-46)TII1 (30-33)O1 (108-110)AH13 (320-348)S3 (112-115)S2 (50-52)AH2 (54-73)TII2 (77-80)AH6 (171-182)TIV1 (78-81)S4 (155-157)TIV2 (79-82)3H1 (85-87)TI1 (87-90)TI2 (135-138)3H2 (94-96)AH17 (501-512)AH3 (97-108)S6 (186-189)TIV4 (188-191)S7 (192-195)AH4 (118-134)S5 (160-162)AH5 (141-153)AH15 (424-440)AH7 (196-203)TIV3 (164-170)AH8 (214-219)TIV12 (454-457)TI5 (367-370)AH9 (222-254)3H3 (259-261)TI3 (285-288)TIV5 (288-291)AH10 (263-267)AH11 (272-285)AH12 (294-304)TIV6 (289-292)TIV9 (414-417)TIV7 (352-355)S8 (355-357)TIV8 (357-360)TI4 (358-361)S9 (362-364)3H4 (410-412)TI6 (401-404)AH14 (371-400)TI7 (402-405)TIV11 (417-420)TI8 (443-446)TI9 (444-447)3H5 (452-454)TI10 (496-499)TVIII3 (456-459)AH16 (462-494)TIV10 (416-419)TII3 (211-214)TVIII1 (267-270)TI'2 (405-408)TII'1 (421-424)Updating...
connected with : NaN
molecule tags Lyase
source organism Pantoea agglomerans
publication title Insights into the mechanistic pathway of the Pantoea agglomerans phenylalanine aminomutase.
pubmed doi rcsb
molecule keywords AdmH
total genus 203
structure length 513
sequence length 514
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-11-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00221 Lyase_aromatic Aromatic amino acid lyase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.275.10 Mainly Alpha Orthogonal Bundle Fumarase C; Chain B, domain 1 Fumarase/aspartase (N-terminal domain) 3unvA01
1.20.200.10 Mainly Alpha Up-down Bundle Fumarase C; Chain A, domain 2 Fumarase/aspartase (Central domain) 3unvA02
2HVGA 1FUQA 1K62A 1I0AA 4APAA 4EEIA 1DCNA 1GKJA 4FLCA 1YISA 1Q5NA 4BAAA 1GK3A 4C6GA 2O7DA 4HGVA 3R6YA 4CQ5A 1T6JA 1TJUA 3UNVA 3E04A 2RJRA 3OCEA 2FUSA 2PTQA 2X75A 3RRPA 2PFMA 1DOFA 3QBPA 3CZOA 1TJVA 5F91A 1HY1A 1FUPA 4C5SA 3TV2A 4ADMA 4BABA 2VD6A 4V2RA 5F92A 3R6QA 4MX2A 1B8FA 4V2QA 2QGAB 1Y2MA 1W27A 1RE5A 3KDYA 3GTDA 1JSWA 2O6YA 2NYFA 3OCFA 3C8TA 2E9FA 3NO9A 5D6BA 2O78A 1J3UA 1VDKA 5EYTA 3R6VA 3RD8A 2PTRA 1TJWA 4APBA 2O7EA 2QVEA 5HW2A 2RJSA 1TJ7A 2PTSA 3GZHA 4C5UA 1C3CA 4NSLA 1C3UA 2NYNA 1XWOA 4NLEA 1AUWA 4C5RA 2YIIA 1FUOA 1HY0A 2J91A 1EB4A 1YFEA 3BHGA 2O7BA 1KQ7A 3NZ4A 1U16A 1YFMA 1U15A 4FFXA 1FURA 1K7WA 1GKMA 2OHYA 1T6PA 1GK2A 4EFCA 3KDZA 2O7FA 4ADLA 5EYVA
chains in the Genus database with same CATH superfamily
2HVGA 1FUQA 1XL7A 1K62A 1I0AA 4APAA 1XMDA 1DCNA 1GKJA 1XMCA 4EEIA 4FLCA 1YISA 1Q5NA 5H8WA 4BAAA 1GK3A 4C6GA 2O7DA 4HGVA 3R6YA 4CQ5A 2VSFA 1T6JA 1TJUA 3UNVA 3E04A 2RJRA 3OCEA 2FUSA 2PTQA 2X75A 3RRPA 2PFMA 1DOFA 3QBPA 3CZOA 1TJVA 5F91A 1HY1A 1FUPA 2VL7A 1XLYA 4C5SA 3TV2A 4ADMA 4BABA 2VD6A 2FELA 4V2RA 5F92A 3R6QA 4MX2A 1B8FA 1XL8A 2QGAB 4V2QA 1Y2MA 1W27A 1RE5A 3KDYA 3GTDA 1JSWA 2O6YA 2NYFA 3OCFA 3C8TA 2E9FA 3NO9A 5D6BA 2O78A 1J3UA 1VDKA 5EYTA 3R6VA 3RD8A 2PTRA 5M0IA 1TJWA 4APBA 2O7EA 2QVEA 5HW2A 2RJSA 3CRW1 1TJ7A 2PTSA 3GZHA 4C5UA 1C3CA 4NSLA 1C3UA 3CRVA 2NYNA 1XWOA 4NLEA 1AUWA 4C5RA 2YIIA 1FUOA 1HY0A 2J91A 1EB4A 1YFEA 4A15A 3BHGA 2O7BA 1KQ7A 3NZ4A 1U16A 5M0JA 2FENA 1YFMA 4WNLA 1U15A 4FFXA 1FURA 1K7WA 1GKMA 2OHYA 1T6PA 1GK2A 4EFCA 3KDZA 2O7FA 4ADLA 5EYVA
chains in the Genus database with same CATH topology
2HVGA 1FUQA 1K62A 1I0AA 4APAA 4EEIA 1DCNA 1GKJA 4FLCA 1YISA 1Q5NA 4BAAA 1GK3A 4C6GA 2O7DA 4HGVA 3R6YA 4CQ5A 1T6JA 1TJUA 3UNVA 3E04A 2RJRA 3OCEA 2FUSA 2PTQA 2X75A 3RRPA 2PFMA 1DOFA 3QBPA 3CZOA 1TJVA 5F91A 1HY1A 1FUPA 4C5SA 3TV2A 4ADMA 4BABA 2VD6A 4V2RA 5F92A 3R6QA 4MX2A 1B8FA 4V2QA 2QGAB 1Y2MA 1W27A 1RE5A 3KDYA 3GTDA 1JSWA 2O6YA 2NYFA 3OCFA 3C8TA 2E9FA 3NO9A 5D6BA 2O78A 1J3UA 1VDKA 5EYTA 3R6VA 3RD8A 2PTRA 1TJWA 4APBA 2O7EA 2QVEA 5HW2A 2RJSA 1TJ7A 2PTSA 3GZHA 4C5UA 1C3CA 4NSLA 1C3UA 2NYNA 1XWOA 4NLEA 1AUWA 4C5RA 2YIIA 1FUOA 1HY0A 2J91A 1EB4A 1YFEA 3BHGA 2O7BA 1KQ7A 3NZ4A 1U16A 1YFMA 1U15A 4FFXA 1FURA 1K7WA 1GKMA 2OHYA 1T6PA 1GK2A 4EFCA 3KDZA 2O7FA 4ADLA 5EYVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HVG A;  1FUQ A;  1K62 A;  1I0A A;  4APA A;  4EEI A;  1DCN A;  1GKJ A;  4FLC A;  1YIS A;  1Q5N A;  4BAA A;  1GK3 A;  4C6G A;  2O7D A;  4HGV A;  3R6Y A;  4CQ5 A;  1T6J A;  1TJU A;  3UNV A;  3E04 A;  2RJR A;  3OCE A;  2FUS A;  2PTQ A;  2X75 A;  3RRP A;  2PFM A;  1DOF A;  3QBP A;  3CZO A;  1TJV A;  5F91 A;  1HY1 A;  1FUP A;  4C5S A;  3TV2 A;  4ADM A;  4BAB A;  2VD6 A;  4V2R A;  5F92 A;  3R6Q A;  4MX2 A;  1B8F A;  4V2Q A;  2QGA B;  1Y2M A;  1W27 A;  1RE5 A;  3KDY A;  3GTD A;  1JSW A;  2O6Y A;  2NYF A;  3OCF A;  3C8T A;  2E9F A;  3NO9 A;  5D6B A;  2O78 A;  1J3U A;  1VDK A;  5EYT A;  3R6V A;  3RD8 A;  2PTR A;  1TJW A;  4APB A;  2O7E A;  2QVE A;  5HW2 A;  2RJS A;  1TJ7 A;  2PTS A;  3GZH A;  4C5U A;  1C3C A;  4NSL A;  1C3U A;  2NYN A;  1XWO A;  4NLE A;  1AUW A;  4C5R A;  2YII A;  1FUO A;  1HY0 A;  2J91 A;  1EB4 A;  1YFE A;  3BHG A;  2O7B A;  1KQ7 A;  3NZ4 A;  1U16 A;  1YFM A;  1U15 A;  4FFX A;  1FUR A;  1K7W A;  1GKM A;  2OHY A;  1T6P A;  1GK2 A;  4EFC A;  3KDZ A;  2O7F A;  4ADL A;  5EYV A; 
#chains in the Genus database with same CATH topology
 2HVG A;  1FUQ A;  1XL7 A;  1K62 A;  1I0A A;  4APA A;  1XMD A;  1DCN A;  1GKJ A;  1XMC A;  4EEI A;  4FLC A;  1YIS A;  1Q5N A;  5H8W A;  4BAA A;  1GK3 A;  4C6G A;  2O7D A;  4HGV A;  3R6Y A;  4CQ5 A;  2VSF A;  1T6J A;  1TJU A;  3UNV A;  3E04 A;  2RJR A;  3OCE A;  2FUS A;  2PTQ A;  2X75 A;  3RRP A;  2PFM A;  1DOF A;  3QBP A;  3CZO A;  1TJV A;  5F91 A;  1HY1 A;  1FUP A;  2VL7 A;  1XLY A;  4C5S A;  3TV2 A;  4ADM A;  4BAB A;  2VD6 A;  2FEL A;  4V2R A;  5F92 A;  3R6Q A;  4MX2 A;  1B8F A;  1XL8 A;  2QGA B;  4V2Q A;  1Y2M A;  1W27 A;  1RE5 A;  3KDY A;  3GTD A;  1JSW A;  2O6Y A;  2NYF A;  3OCF A;  3C8T A;  2E9F A;  3NO9 A;  5D6B A;  2O78 A;  1J3U A;  1VDK A;  5EYT A;  3R6V A;  3RD8 A;  2PTR A;  5M0I A;  1TJW A;  4APB A;  2O7E A;  2QVE A;  5HW2 A;  2RJS A;  3CRW 1;  1TJ7 A;  2PTS A;  3GZH A;  4C5U A;  1C3C A;  4NSL A;  1C3U A;  3CRV A;  2NYN A;  1XWO A;  4NLE A;  1AUW A;  4C5R A;  2YII A;  1FUO A;  1HY0 A;  2J91 A;  1EB4 A;  1YFE A;  4A15 A;  3BHG A;  2O7B A;  1KQ7 A;  3NZ4 A;  1U16 A;  5M0J A;  2FEN A;  1YFM A;  4WNL A;  1U15 A;  4FFX A;  1FUR A;  1K7W A;  1GKM A;  2OHY A;  1T6P A;  1GK2 A;  4EFC A;  3KDZ A;  2O7F A;  4ADL A;  5EYV A; 
#chains in the Genus database with same CATH homology
 2HVG A;  1FUQ A;  1K62 A;  1I0A A;  4APA A;  4EEI A;  1DCN A;  1GKJ A;  4FLC A;  1YIS A;  1Q5N A;  4BAA A;  1GK3 A;  4C6G A;  2O7D A;  4HGV A;  3R6Y A;  4CQ5 A;  1T6J A;  1TJU A;  3UNV A;  3E04 A;  2RJR A;  3OCE A;  2FUS A;  2PTQ A;  2X75 A;  3RRP A;  2PFM A;  1DOF A;  3QBP A;  3CZO A;  1TJV A;  5F91 A;  1HY1 A;  1FUP A;  4C5S A;  3TV2 A;  4ADM A;  4BAB A;  2VD6 A;  4V2R A;  5F92 A;  3R6Q A;  4MX2 A;  1B8F A;  4V2Q A;  2QGA B;  1Y2M A;  1W27 A;  1RE5 A;  3KDY A;  3GTD A;  1JSW A;  2O6Y A;  2NYF A;  3OCF A;  3C8T A;  2E9F A;  3NO9 A;  5D6B A;  2O78 A;  1J3U A;  1VDK A;  5EYT A;  3R6V A;  3RD8 A;  2PTR A;  1TJW A;  4APB A;  2O7E A;  2QVE A;  5HW2 A;  2RJS A;  1TJ7 A;  2PTS A;  3GZH A;  4C5U A;  1C3C A;  4NSL A;  1C3U A;  2NYN A;  1XWO A;  4NLE A;  1AUW A;  4C5R A;  2YII A;  1FUO A;  1HY0 A;  2J91 A;  1EB4 A;  1YFE A;  3BHG A;  2O7B A;  1KQ7 A;  3NZ4 A;  1U16 A;  1YFM A;  1U15 A;  4FFX A;  1FUR A;  1K7W A;  1GKM A;  2OHY A;  1T6P A;  1GK2 A;  4EFC A;  3KDZ A;  2O7F A;  4ADL A;  5EYV A; 
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