3UNVA

Pantoea agglomerans phenylalanine aminomutase
Total Genus 203
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
203
sequence length
514
structure length
513
Chain Sequence
SFHISSGKDISLEEIARAARDHQPVTLHDEVVNRVTRSRSILESMVSDERVIYGVNTSMGGFVNYIVPIAKASELQNNLINAVATNVGKYFDDTTVRATMLARIVSLSRGNSAISIVNFKKLIEIYNQGIVPCIPEKGSLGDLGPLAAIALVCTGQWKARYQGEQMSGAMALEKAGISPMELSFKEGLALINGTSAMVGLGVLLYDEVKRLFDTYLTVTSLSIEGLHGKTKPFEPAVHRMKPHQGQLEVATTIWETLADSSLAVNEHEVEKLIAEEMDGLVKASNHQIEDAYSIRCTPQILGPVADTLKNIKQTLTNELNSSNDNPLIDQTTEEVFHNGHFHGQYVSMAMDHLNIALVTMMNLANRRIDRFMDKSNSNGLPPFLCAENAGLRLGLMGGQFMTASITAESRASCMPMSIQSLSTTGDFQDIVSFGLVAARRVREQLKNLKYVFSFELLCACQAVDIRGTAGLSKRTRALYDKTRTLVPYLEEDKTISDYIESIAQTVLTKNSDI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords AdmH
publication title Insights into the mechanistic pathway of the Pantoea agglomerans phenylalanine aminomutase.
pubmed doi rcsb
source organism Pantoea agglomerans
total genus 203
structure length 513
sequence length 514
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-11-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00221 Lyase_aromatic Aromatic amino acid lyase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.275.10 Mainly Alpha Orthogonal Bundle Fumarase C; Chain B, domain 1 Fumarase/aspartase (N-terminal domain) 3unvA01
1.20.200.10 Mainly Alpha Up-down Bundle Fumarase C; Chain A, domain 2 Fumarase/aspartase (Central domain) 3unvA02
4C5SA 1K62A 1HY0A 4ADLA 2O7BA 4V2RA 2O6YA 2PTQA 1YISA 3GTDA 1FURA 1YFMA 1KQ7A 3C8TA 2YIIA 3UNVA 2OHYA 3RRPA 1JSWA 2O7EA 2FUSA 2PTSA 2O7FA 1FUPA 1U15A 3RD8A 1TJUA 2VD6A 3TV2A 1FUQA 4C5RA 1T6PA 3CZOA 3OCFA 4NSLA 1YFEA 2J91A 1TJVA 1B8FA 1EB4A 1HY1A 4EFCA 1C3CA 1RE5A 2O78A 1J3UA 4FLCA 1I0AA 4MX2A 1VDKA 1C3UA 3NZ4A 1DOFA 1U16A 2PTRA 3OCEA 4NLEA 1GKMA 2QGAB 2RJSA 1GK2A 2O7DA 4C6GA 5EYTA 4ADMA 4APAA 4APBA 2X75A 4FFXA 1FUOA 1Y2MA 2NYFA 1DCNA 4BABA 1TJWA 4C5UA 5F92A 1W27A 1TJ7A 3GZHA 1K7WA 2HVGA 1Q5NA 3BHGA 1GKJA 2RJRA 2NYNA 3NO9A 4V2QA 1XWOA 4HGVA 5F91A 3E04A 3R6YA 4EEIA 5EYVA 3R6QA 5HW2A 2PFMA 3R6VA 1AUWA 5D6BA 1T6JA 3QBPA 2E9FA 3KDYA 3KDZA 1GK3A 4BAAA 4CQ5A 2QVEA
chains in the Genus database with same CATH superfamily
4C5SA 1K62A 1HY0A 4ADLA 2O7BA 4V2RA 2O6YA 2PTQA 3CRVA 1YISA 3GTDA 1FURA 1YFMA 1KQ7A 3C8TA 5M0IA 1XLYA 2VSFA 2YIIA 3UNVA 2OHYA 3RRPA 1JSWA 2O7EA 2FUSA 2PTSA 1XMDA 1XL8A 1XMCA 2O7FA 1FUPA 1U15A 3RD8A 1TJUA 5H8WA 2VD6A 3TV2A 1FUQA 4C5RA 1T6PA 3CZOA 3OCFA 4NSLA 1YFEA 2J91A 1TJVA 1B8FA 1EB4A 1HY1A 2FENA 4EFCA 1C3CA 1RE5A 2O78A 1J3UA 4FLCA 1I0AA 4MX2A 1VDKA 1C3UA 1DOFA 3NZ4A 1U16A 2PTRA 3OCEA 4NLEA 1GKMA 2QGAB 2RJSA 1GK2A 2O7DA 4C6GA 5EYTA 4ADMA 4APAA 4APBA 2X75A 4FFXA 1FUOA 1Y2MA 2NYFA 1DCNA 4BABA 1TJWA 4C5UA 5F92A 1W27A 5M0JA 3CRW1 1TJ7A 1K7WA 2HVGA 3GZHA 1Q5NA 3BHGA 1GKJA 2RJRA 2NYNA 3NO9A 4V2QA 1XWOA 4HGVA 1XL7A 5F91A 3E04A 3R6YA 4EEIA 5EYVA 4A15A 3R6QA 5HW2A 2PFMA 3R6VA 1AUWA 2VL7A 5D6BA 2FELA 1T6JA 3QBPA 2E9FA 4WNLA 3KDYA 3KDZA 1GK3A 4BAAA 4CQ5A 2QVEA
chains in the Genus database with same CATH topology
4C5SA 1K62A 1HY0A 4ADLA 2O7BA 4V2RA 2O6YA 2PTQA 1YISA 3GTDA 1FURA 1YFMA 1KQ7A 3C8TA 2YIIA 3UNVA 2OHYA 3RRPA 1JSWA 2O7EA 2FUSA 2PTSA 2O7FA 1FUPA 1U15A 3RD8A 1TJUA 2VD6A 3TV2A 1FUQA 4C5RA 1T6PA 3CZOA 3OCFA 4NSLA 1YFEA 2J91A 1TJVA 1B8FA 1EB4A 1HY1A 4EFCA 1C3CA 1RE5A 2O78A 1J3UA 4FLCA 1I0AA 4MX2A 1VDKA 1C3UA 3NZ4A 1DOFA 1U16A 2PTRA 3OCEA 4NLEA 1GKMA 2QGAB 2RJSA 1GK2A 2O7DA 4C6GA 5EYTA 4ADMA 4APAA 4APBA 2X75A 4FFXA 1FUOA 1Y2MA 2NYFA 1DCNA 4BABA 1TJWA 4C5UA 5F92A 1W27A 1TJ7A 3GZHA 1K7WA 2HVGA 1Q5NA 3BHGA 1GKJA 2RJRA 2NYNA 3NO9A 4V2QA 1XWOA 4HGVA 5F91A 3E04A 3R6YA 4EEIA 5EYVA 3R6QA 5HW2A 2PFMA 3R6VA 1AUWA 5D6BA 1T6JA 3QBPA 2E9FA 3KDYA 3KDZA 1GK3A 4BAAA 4CQ5A 2QVEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4C5S A;  1K62 A;  1HY0 A;  4ADL A;  2O7B A;  4V2R A;  2O6Y A;  2PTQ A;  1YIS A;  3GTD A;  1FUR A;  1YFM A;  1KQ7 A;  3C8T A;  2YII A;  3UNV A;  2OHY A;  3RRP A;  1JSW A;  2O7E A;  2FUS A;  2PTS A;  2O7F A;  1FUP A;  1U15 A;  3RD8 A;  1TJU A;  2VD6 A;  3TV2 A;  1FUQ A;  4C5R A;  1T6P A;  3CZO A;  3OCF A;  4NSL A;  1YFE A;  2J91 A;  1TJV A;  1B8F A;  1EB4 A;  1HY1 A;  4EFC A;  1C3C A;  1RE5 A;  2O78 A;  1J3U A;  4FLC A;  1I0A A;  4MX2 A;  1VDK A;  1C3U A;  3NZ4 A;  1DOF A;  1U16 A;  2PTR A;  3OCE A;  4NLE A;  1GKM A;  2QGA B;  2RJS A;  1GK2 A;  2O7D A;  4C6G A;  5EYT A;  4ADM A;  4APA A;  4APB A;  2X75 A;  4FFX A;  1FUO A;  1Y2M A;  2NYF A;  1DCN A;  4BAB A;  1TJW A;  4C5U A;  5F92 A;  1W27 A;  1TJ7 A;  3GZH A;  1K7W A;  2HVG A;  1Q5N A;  3BHG A;  1GKJ A;  2RJR A;  2NYN A;  3NO9 A;  4V2Q A;  1XWO A;  4HGV A;  5F91 A;  3E04 A;  3R6Y A;  4EEI A;  5EYV A;  3R6Q A;  5HW2 A;  2PFM A;  3R6V A;  1AUW A;  5D6B A;  1T6J A;  3QBP A;  2E9F A;  3KDY A;  3KDZ A;  1GK3 A;  4BAA A;  4CQ5 A;  2QVE A; 
#chains in the Genus database with same CATH topology
 4C5S A;  1K62 A;  1HY0 A;  4ADL A;  2O7B A;  4V2R A;  2O6Y A;  2PTQ A;  3CRV A;  1YIS A;  3GTD A;  1FUR A;  1YFM A;  1KQ7 A;  3C8T A;  5M0I A;  1XLY A;  2VSF A;  2YII A;  3UNV A;  2OHY A;  3RRP A;  1JSW A;  2O7E A;  2FUS A;  2PTS A;  1XMD A;  1XL8 A;  1XMC A;  2O7F A;  1FUP A;  1U15 A;  3RD8 A;  1TJU A;  5H8W A;  2VD6 A;  3TV2 A;  1FUQ A;  4C5R A;  1T6P A;  3CZO A;  3OCF A;  4NSL A;  1YFE A;  2J91 A;  1TJV A;  1B8F A;  1EB4 A;  1HY1 A;  2FEN A;  4EFC A;  1C3C A;  1RE5 A;  2O78 A;  1J3U A;  4FLC A;  1I0A A;  4MX2 A;  1VDK A;  1C3U A;  1DOF A;  3NZ4 A;  1U16 A;  2PTR A;  3OCE A;  4NLE A;  1GKM A;  2QGA B;  2RJS A;  1GK2 A;  2O7D A;  4C6G A;  5EYT A;  4ADM A;  4APA A;  4APB A;  2X75 A;  4FFX A;  1FUO A;  1Y2M A;  2NYF A;  1DCN A;  4BAB A;  1TJW A;  4C5U A;  5F92 A;  1W27 A;  5M0J A;  3CRW 1;  1TJ7 A;  1K7W A;  2HVG A;  3GZH A;  1Q5N A;  3BHG A;  1GKJ A;  2RJR A;  2NYN A;  3NO9 A;  4V2Q A;  1XWO A;  4HGV A;  1XL7 A;  5F91 A;  3E04 A;  3R6Y A;  4EEI A;  5EYV A;  4A15 A;  3R6Q A;  5HW2 A;  2PFM A;  3R6V A;  1AUW A;  2VL7 A;  5D6B A;  2FEL A;  1T6J A;  3QBP A;  2E9F A;  4WNL A;  3KDY A;  3KDZ A;  1GK3 A;  4BAA A;  4CQ5 A;  2QVE A; 
#chains in the Genus database with same CATH homology
 4C5S A;  1K62 A;  1HY0 A;  4ADL A;  2O7B A;  4V2R A;  2O6Y A;  2PTQ A;  1YIS A;  3GTD A;  1FUR A;  1YFM A;  1KQ7 A;  3C8T A;  2YII A;  3UNV A;  2OHY A;  3RRP A;  1JSW A;  2O7E A;  2FUS A;  2PTS A;  2O7F A;  1FUP A;  1U15 A;  3RD8 A;  1TJU A;  2VD6 A;  3TV2 A;  1FUQ A;  4C5R A;  1T6P A;  3CZO A;  3OCF A;  4NSL A;  1YFE A;  2J91 A;  1TJV A;  1B8F A;  1EB4 A;  1HY1 A;  4EFC A;  1C3C A;  1RE5 A;  2O78 A;  1J3U A;  4FLC A;  1I0A A;  4MX2 A;  1VDK A;  1C3U A;  3NZ4 A;  1DOF A;  1U16 A;  2PTR A;  3OCE A;  4NLE A;  1GKM A;  2QGA B;  2RJS A;  1GK2 A;  2O7D A;  4C6G A;  5EYT A;  4ADM A;  4APA A;  4APB A;  2X75 A;  4FFX A;  1FUO A;  1Y2M A;  2NYF A;  1DCN A;  4BAB A;  1TJW A;  4C5U A;  5F92 A;  1W27 A;  1TJ7 A;  3GZH A;  1K7W A;  2HVG A;  1Q5N A;  3BHG A;  1GKJ A;  2RJR A;  2NYN A;  3NO9 A;  4V2Q A;  1XWO A;  4HGV A;  5F91 A;  3E04 A;  3R6Y A;  4EEI A;  5EYV A;  3R6Q A;  5HW2 A;  2PFM A;  3R6V A;  1AUW A;  5D6B A;  1T6J A;  3QBP A;  2E9F A;  3KDY A;  3KDZ A;  1GK3 A;  4BAA A;  4CQ5 A;  2QVE A; 
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similar chains in the Genus database (?% sequence similarity)
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