2X75A

Staphylococcus aureus adenylosuccinate lyase
Total Genus 165
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
165
sequence length
430
structure length
427
Chain Sequence
IERYSREEMSNIWTDQNRYEAWLEVEILACEAWSELGHIPKADVQKIRQNAKVNVERAQEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTALSFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMQRNLQRFKQVREEIEVGKMSGAVGTFANIPPEIESYVCKHLGIGTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIVDRLTVFEDNMRNNIDKTFGLIFSQRVLLALINKGMVREEAYDKVQPKAMISWETKTPFRELIEQDESITTKEELDECFDPKHHLNQVDTIFERAGLA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords ADENYLOSUCCINATE LYASE
publication title Structure of Staphylococcus Aureus Adenylosuccinate Lyase (Purb) and Assessment of its Potential as a Target for Structure-Based Inhibitor Discovery.
pubmed doi rcsb
source organism Staphylococcus aureus
total genus 165
structure length 427
sequence length 430
ec nomenclature ec 4.3.2.2: Adenylosuccinate lyase.
pdb deposition date 2010-02-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00206 Lyase_1 Lyase
A PF10397 ADSL_C Adenylosuccinate lyase C-terminus
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.40.30 Mainly Alpha Orthogonal Bundle Ribonucleotide Reductase Protein R1; domain 1 Fumarase/aspartase (C-terminal domain) 2x75A03
1.10.275.10 Mainly Alpha Orthogonal Bundle Fumarase C; Chain B, domain 1 Fumarase/aspartase (N-terminal domain) 2x75A01
1.20.200.10 Mainly Alpha Up-down Bundle Fumarase C; Chain A, domain 2 Fumarase/aspartase (Central domain) 2x75A02
4ADLA 1T6PA 2O7BA 3RD8A 2X75A 4EFCA 1GK3A 1Y2MA 4C5RA 3BHGA 1I0AA 1GK2A 1FUOA 2RJRA 1HY1A 2OHYA 2RJSA 1AUWA 3NZ4A 1FUQA 2PFMA 3R6VA 4MX2A 1T6JA 2PTQA 4ADMA 2QGAB 3R6QA 1U15A 2O7FA 1RE5A 1FUPA 4APBA 1K7WA 5D6BA 1FURA 3CZOA 1YFEA 2NYFA 5HW2A 1JSWA 4V2QA 1DOFA 3R6YA 1YFMA 3GTDA 1TJVA 1TJUA 2PTRA 2O7EA 3UNVA 5F91A 4HGVA 1GKJA 3GZHA 3E04A 1Q5NA 4EEIA 2FUSA 4FLCA 2QVEA 3C8TA 2HVGA 5EYTA 1TJ7A 2NYNA 1U16A 4C5UA 2YIIA 3QBPA 2PTSA 1B8FA 1J3UA 2O7DA 2J91A 1GKMA 1XWOA 1EB4A 2O6YA 4BABA 4APAA 3RRPA 4C6GA 3TV2A 2E9FA 3NO9A 4BAAA 4V2RA 3KDZA 3OCFA 1VDKA 1W27A 4NLEA 3KDYA 2O78A 2VD6A 4FFXA 1YISA 5EYVA 1C3CA 3OCEA 1TJWA 5F92A 1K62A 1KQ7A 4NSLA 4CQ5A 4C5SA 1DCNA 1HY0A 1C3UA
chains in the Genus database with same CATH superfamily
3F4TA 3CRW1 4ADLA 1T6PA 2YV5A 2O7BA 3RD8A 2X75A 4EFCA 1GK3A 1Y2MA 4C5RA 3BHGA 1I0AA 1GK2A 1FUOA 2RJRA 1HY1A 3U19A 2OHYA 2RJSA 4L6CA 1AUWA 2VL7A 2VSFA 3NZ4A 1FUQA 2PFMA 3R6VA 4MX2A 1T9HA 1T6JA 2PTQA 4ADMA 2QGAB 3R6QA 1U15A 2JARA 2O7FA 1XL7A 1RE5A 1FUPA 4WNLA 5M0JA 4APBA 1K7WA 5D6BA 4L6AA 1FURA 1Q91A 3CZOA 1YFEA 1Z4LA 4MUMA 2NYFA 5HW2A 4E88A 1JSWA 3F4RA 4V2QA 1DOFA 2D27A 3R6YA 3F4SA 1YFMA 3GTDA 1TJVA 2D28C 1TJUA 2PTRA 1Z4JA 2JAOA 2O7EA 3UNVA 5F91A 4HGVA 1GKJA 3GZHA 3E04A 1Z4PX 1Q5NA 4YIHA 3CI0K 4EEIA 1Z4MA 2FUSA 4MWOA 4L57A 1XMCA 1U0LA 2RCNA 4FLCA 2QVEA 3C8TA 2HVGA 2JAWA 5EYTA 1TJ7A 2NYNA 1XL8A 1U16A 4IQJM 4C5UA 2YIIA 3QBPA 3BWVA 1IW7D 5M0IA 1Z4QA 1XMDA 1Z4IA 2PTSA 1B8FA 1J3UA 2O7DA 2FENA 2J91A 1GKMA 1XWOA 1Z4KA 1EB4A 2I7DA 3U13A 2O6YA 4BABA 4APAA 3RRPA 4C6GA 4NFLA 3TV2A 2E9FA 3NO9A 4BAAA 4V2RA 3KDZA 3CRVA 2FELA 3OCFA 1VDKA 1W27A 1XLYA 4NLEA 3KDYA 2O78A 2VD6A 4FFXA 1YISA 5EYVA 1C3CA 5H8WA 1MH9A 3OCEA 1TJWA 1Q92A 4A15A 5F92A 1K62A 1KQ7A 4NSLA 4CQ5A 4C5SA 1DCNA 4YIKA 1HY0A 2JAUA 1C3UA
chains in the Genus database with same CATH topology
4ADLA 1T6PA 2O7BA 3RD8A 2X75A 4EFCA 1GK3A 1Y2MA 4C5RA 3BHGA 1I0AA 1GK2A 1FUOA 2RJRA 1HY1A 2OHYA 2RJSA 1AUWA 3NZ4A 1FUQA 2PFMA 3R6VA 4MX2A 1T6JA 2PTQA 4ADMA 2QGAB 3R6QA 1U15A 2O7FA 1RE5A 1FUPA 4APBA 1K7WA 5D6BA 1FURA 3CZOA 1YFEA 2NYFA 5HW2A 1JSWA 4V2QA 1DOFA 3R6YA 1YFMA 3GTDA 1TJVA 1TJUA 2PTRA 2O7EA 3UNVA 5F91A 4HGVA 1GKJA 3GZHA 3E04A 1Q5NA 4EEIA 2FUSA 4FLCA 2QVEA 3C8TA 2HVGA 5EYTA 1TJ7A 2NYNA 1U16A 4C5UA 2YIIA 3QBPA 2PTSA 1B8FA 1J3UA 2O7DA 2J91A 1GKMA 1XWOA 1EB4A 2O6YA 4BABA 4APAA 3RRPA 4C6GA 3TV2A 2E9FA 3NO9A 4BAAA 4V2RA 3KDZA 3OCFA 1VDKA 1W27A 4NLEA 3KDYA 2O78A 2VD6A 4FFXA 1YISA 5EYVA 1C3CA 3OCEA 1TJWA 5F92A 1K62A 1KQ7A 4NSLA 4CQ5A 4C5SA 1DCNA 1HY0A 1C3UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ADL A;  1T6P A;  2O7B A;  3RD8 A;  2X75 A;  4EFC A;  1GK3 A;  1Y2M A;  4C5R A;  3BHG A;  1I0A A;  1GK2 A;  1FUO A;  2RJR A;  1HY1 A;  2OHY A;  2RJS A;  1AUW A;  3NZ4 A;  1FUQ A;  2PFM A;  3R6V A;  4MX2 A;  1T6J A;  2PTQ A;  4ADM A;  2QGA B;  3R6Q A;  1U15 A;  2O7F A;  1RE5 A;  1FUP A;  4APB A;  1K7W A;  5D6B A;  1FUR A;  3CZO A;  1YFE A;  2NYF A;  5HW2 A;  1JSW A;  4V2Q A;  1DOF A;  3R6Y A;  1YFM A;  3GTD A;  1TJV A;  1TJU A;  2PTR A;  2O7E A;  3UNV A;  5F91 A;  4HGV A;  1GKJ A;  3GZH A;  3E04 A;  1Q5N A;  4EEI A;  2FUS A;  4FLC A;  2QVE A;  3C8T A;  2HVG A;  5EYT A;  1TJ7 A;  2NYN A;  1U16 A;  4C5U A;  2YII A;  3QBP A;  2PTS A;  1B8F A;  1J3U A;  2O7D A;  2J91 A;  1GKM A;  1XWO A;  1EB4 A;  2O6Y A;  4BAB A;  4APA A;  3RRP A;  4C6G A;  3TV2 A;  2E9F A;  3NO9 A;  4BAA A;  4V2R A;  3KDZ A;  3OCF A;  1VDK A;  1W27 A;  4NLE A;  3KDY A;  2O78 A;  2VD6 A;  4FFX A;  1YIS A;  5EYV A;  1C3C A;  3OCE A;  1TJW A;  5F92 A;  1K62 A;  1KQ7 A;  4NSL A;  4CQ5 A;  4C5S A;  1DCN A;  1HY0 A;  1C3U A; 
#chains in the Genus database with same CATH topology
 3F4T A;  3CRW 1;  4ADL A;  1T6P A;  2YV5 A;  2O7B A;  3RD8 A;  2X75 A;  4EFC A;  1GK3 A;  1Y2M A;  4C5R A;  3BHG A;  1I0A A;  1GK2 A;  1FUO A;  2RJR A;  1HY1 A;  3U19 A;  2OHY A;  2RJS A;  4L6C A;  1AUW A;  2VL7 A;  2VSF A;  3NZ4 A;  1FUQ A;  2PFM A;  3R6V A;  4MX2 A;  1T9H A;  1T6J A;  2PTQ A;  4ADM A;  2QGA B;  3R6Q A;  1U15 A;  2JAR A;  2O7F A;  1XL7 A;  1RE5 A;  1FUP A;  4WNL A;  5M0J A;  4APB A;  1K7W A;  5D6B A;  4L6A A;  1FUR A;  1Q91 A;  3CZO A;  1YFE A;  1Z4L A;  4MUM A;  2NYF A;  5HW2 A;  4E88 A;  1JSW A;  3F4R A;  4V2Q A;  1DOF A;  2D27 A;  3R6Y A;  3F4S A;  1YFM A;  3GTD A;  1TJV A;  2D28 C;  1TJU A;  2PTR A;  1Z4J A;  2JAO A;  2O7E A;  3UNV A;  5F91 A;  4HGV A;  1GKJ A;  3GZH A;  3E04 A;  1Z4P X;  1Q5N A;  4YIH A;  3CI0 K;  4EEI A;  1Z4M A;  2FUS A;  4MWO A;  4L57 A;  1XMC A;  1U0L A;  2RCN A;  4FLC A;  2QVE A;  3C8T A;  2HVG A;  2JAW A;  5EYT A;  1TJ7 A;  2NYN A;  1XL8 A;  1U16 A;  4IQJ M;  4C5U A;  2YII A;  3QBP A;  3BWV A;  1IW7 D;  5M0I A;  1Z4Q A;  1XMD A;  1Z4I A;  2PTS A;  1B8F A;  1J3U A;  2O7D A;  2FEN A;  2J91 A;  1GKM A;  1XWO A;  1Z4K A;  1EB4 A;  2I7D A;  3U13 A;  2O6Y A;  4BAB A;  4APA A;  3RRP A;  4C6G A;  4NFL A;  3TV2 A;  2E9F A;  3NO9 A;  4BAA A;  4V2R A;  3KDZ A;  3CRV A;  2FEL A;  3OCF A;  1VDK A;  1W27 A;  1XLY A;  4NLE A;  3KDY A;  2O78 A;  2VD6 A;  4FFX A;  1YIS A;  5EYV A;  1C3C A;  5H8W A;  1MH9 A;  3OCE A;  1TJW A;  1Q92 A;  4A15 A;  5F92 A;  1K62 A;  1KQ7 A;  4NSL A;  4CQ5 A;  4C5S A;  1DCN A;  4YIK A;  1HY0 A;  2JAU A;  1C3U A; 
#chains in the Genus database with same CATH homology
 4ADL A;  1T6P A;  2O7B A;  3RD8 A;  2X75 A;  4EFC A;  1GK3 A;  1Y2M A;  4C5R A;  3BHG A;  1I0A A;  1GK2 A;  1FUO A;  2RJR A;  1HY1 A;  2OHY A;  2RJS A;  1AUW A;  3NZ4 A;  1FUQ A;  2PFM A;  3R6V A;  4MX2 A;  1T6J A;  2PTQ A;  4ADM A;  2QGA B;  3R6Q A;  1U15 A;  2O7F A;  1RE5 A;  1FUP A;  4APB A;  1K7W A;  5D6B A;  1FUR A;  3CZO A;  1YFE A;  2NYF A;  5HW2 A;  1JSW A;  4V2Q A;  1DOF A;  3R6Y A;  1YFM A;  3GTD A;  1TJV A;  1TJU A;  2PTR A;  2O7E A;  3UNV A;  5F91 A;  4HGV A;  1GKJ A;  3GZH A;  3E04 A;  1Q5N A;  4EEI A;  2FUS A;  4FLC A;  2QVE A;  3C8T A;  2HVG A;  5EYT A;  1TJ7 A;  2NYN A;  1U16 A;  4C5U A;  2YII A;  3QBP A;  2PTS A;  1B8F A;  1J3U A;  2O7D A;  2J91 A;  1GKM A;  1XWO A;  1EB4 A;  2O6Y A;  4BAB A;  4APA A;  3RRP A;  4C6G A;  3TV2 A;  2E9F A;  3NO9 A;  4BAA A;  4V2R A;  3KDZ A;  3OCF A;  1VDK A;  1W27 A;  4NLE A;  3KDY A;  2O78 A;  2VD6 A;  4FFX A;  1YIS A;  5EYV A;  1C3C A;  3OCE A;  1TJW A;  5F92 A;  1K62 A;  1KQ7 A;  4NSL A;  4CQ5 A;  4C5S A;  1DCN A;  1HY0 A;  1C3U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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