4FXGG

Complement c4 in complex with masp-2
Total Genus 21

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
145
structure length
145
Chain Sequence
TAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEPVCGLSART

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
O2 (68-97)EMPTYUpdating...
connected with : NaN
molecule tags Immune system
source organism Homo sapiens
publication title Structural basis for activation of the complement system by component C4 cleavage.
pubmed doi rcsb
molecule keywords Complement C4 beta chain
total genus 21
structure length 145
sequence length 145
chains with identical sequence I
ec nomenclature ec 3.4.21.104: Mannan-binding lectin-associated serine protease-2.
pdb deposition date 2012-07-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
G PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4fxgG02
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4fxgG01
3GXEA 1Z92B 3ZD1A 5FO8C 5JPMG 4PZ5A 3SW0X 1E88A 2A55A 4IGDA 2WIIC 1ELVA 1E8BA 2MCZA 2IZ4A 3EJHA 1HFHA 2V8EA 3M7PA 2CG6A 4AYEA 4FXGG 4WJG2 1QO6A 3T5OA 3L89M 2CG7A 3ERBA 4MUCA 2JRAA 3IU3I 2IZ3A 4AYDA 5HYTB 2RL0A 4ZH1D 1GKGA 3ZD2A 1OK2A 2JGWA 2YBYA 3NFPI 1O9AA 1GHQB 3RJ3D 3GOVA 2XWJI 4KKDA 1SRZA 1HFIA 2EC3A 1TPGA 4YNXA 4B2SA 4CSYA 5I0QB 2XWBF 3KZJA 1GPZA 4J38B 4AYIA 2XRBA 1H04P 2B5ID 1G4FA 1TPMA 4DJZA 1OJVA 1PPQA 1U5MA 4K12A 1MD8A 2W80A 4JHSA 2BZMA 1H2QP 1C1ZA 1FBRA 1SS2A 2LOJA 2ERJA 2RLPA 4LOSA 5HYUB 1CKLA 2RKZA 1H03P 2O39C 1NWVA 1OJYA 3INBC 4B2RA 1E5GA 1H2PP 3TVJA 3ZRZA 2G7IA 4F4OC 1VVCA 4ONTD 2KMSA 1UOTP 3IX0A 1QGBA 2EHFA 2KRIA 1OK9A 3OEDC 1GKNA 1Q3XA 2RKYA 5HZPB 1OJWA 2CKUA 1LY2A 2XRDA 3MQLA 2JGXA 2YRAA 2XQWC 2UWNA 5HYPA 3O8EB 3KXVA 1OK3A 4LOTA 2W81A 4AYMA 1VVDA 1ZJKA 1OK1A 3R62A 1HCCA 4A5WB 2QY0A 1MD7A 1G4GA 3CALA 4C16A 1QUBA 1TPNA 2RLQA 3OXUD 3OP8A 2MCYA
chains in the Genus database with same CATH superfamily
3GXEA 1Z92B 3ZD1A 3F6KA 5FO8C 5JPMG 4PZ5A 3SW0X 1E88A 3CI0J 2A55A 4IGDA 2WIIC 1ELVA 1E8BA 2MCZA 2IZ4A 3EJHA 1HFHA 2V8EA 3M7PA 2CG6A 4APLA 4AYEA 4FXGG 4WJG2 1QO6A 3T5OA 3L89M 2CG7A 3ERBA 4MUCA 2JRAA 5DN4A 3IU3I 3ZLDA 2IZ3A 2I2LA 4AYDA 5HYTB 2RL0A 4ZH1D 1GKGA 3ZD2A 1OK2A 2JGWA 2YBYA 3NFPI 1O9AA 1GHQB 3RJ3D 3GOVA 2XWJI 4KKDA 1SRZA 1HFIA 3WSYA 2EC3A 1TPGA 4YNXA 4B2SA 4CSYA 5I0QB 2XWBF 3KZJA 1GPZA 4J38B 4AYIA 2XRBA 3ZLEA 4MSLA 3FGTA 2Y8SA 1H04P 2B5ID 1G4FA 1TPMA 4DJZA 1OJVA 1PPQA 1U5MA 4K12A 1MD8A 2X2ZA 2W80A 2Y8TA 4JHSA 3FGRA 2BZMA 1H2QP 2ZYCA 1C1ZA 1FBRA 1SS2A 2LOJA 2ERJA 2RLPA 4LOSA 3VWOA 5HYUB 1CKLA 2RKZA 1H03P 2O39C 1NWVA 1OJYA 3INBC 4B2RA 1E5GA 1H2PP 3TVJA 3ZRZA 2G7IA 4F4OC 1VVCA 4ONTD 2KMSA 1UOTP 3IX0A 3WSXA 1QGBA 2EHFA 2KRIA 1OK9A 3K3TA 3OEDC 1GKNA 1Q3XA 2RKYA 5HZPB 1OJWA 2CKUA 1LY2A 4YIZA 2XRDA 2Y8RA 3MQLA 4BWCA 2JGXA 2YRAA 2XQWC 2UWNA 5HYPA 5DN5A 3O8EB 3KXVA 1OK3A 3NJAA 4LOTA 2W81A 4AYMA 4PO7A 1VVDA 1ZJKA 1OK1A 3R62A 1HCCA 4A5WB 1RLHA 2QY0A 1MD7A 1G4GA 3CALA 4C16A 1QUBA 1TPNA 2RLQA 3OXUD 4N7EA 3OP8A 2MCYA
chains in the Genus database with same CATH topology
3GXEA 1Z92B 3ZD1A 5FO8C 5JPMG 4PZ5A 3SW0X 1E88A 2A55A 4IGDA 2WIIC 1ELVA 1E8BA 2MCZA 2IZ4A 3EJHA 1HFHA 2V8EA 3M7PA 2CG6A 4AYEA 4FXGG 4WJG2 1QO6A 3T5OA 3L89M 2CG7A 3ERBA 4MUCA 2JRAA 3IU3I 2IZ3A 4AYDA 5HYTB 2RL0A 4ZH1D 1GKGA 3ZD2A 1OK2A 2JGWA 2YBYA 3NFPI 1O9AA 1GHQB 3RJ3D 3GOVA 2XWJI 4KKDA 1SRZA 1HFIA 2EC3A 1TPGA 4YNXA 4B2SA 4CSYA 5I0QB 2XWBF 3KZJA 1GPZA 4J38B 4AYIA 2XRBA 1H04P 2B5ID 1G4FA 1TPMA 4DJZA 1OJVA 1PPQA 1U5MA 4K12A 1MD8A 2W80A 4JHSA 2BZMA 1H2QP 1C1ZA 1FBRA 1SS2A 2LOJA 2ERJA 2RLPA 4LOSA 5HYUB 1CKLA 2RKZA 1H03P 2O39C 1NWVA 1OJYA 3INBC 4B2RA 1E5GA 1H2PP 3TVJA 3ZRZA 2G7IA 4F4OC 1VVCA 4ONTD 2KMSA 1UOTP 3IX0A 1QGBA 2EHFA 2KRIA 1OK9A 3OEDC 1GKNA 1Q3XA 2RKYA 5HZPB 1OJWA 2CKUA 1LY2A 2XRDA 3MQLA 2JGXA 2YRAA 2XQWC 2UWNA 5HYPA 3O8EB 3KXVA 1OK3A 4LOTA 2W81A 4AYMA 1VVDA 1ZJKA 1OK1A 3R62A 1HCCA 4A5WB 2QY0A 1MD7A 1G4GA 3CALA 4C16A 1QUBA 1TPNA 2RLQA 3OXUD 3OP8A 2MCYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GXE A;  1Z92 B;  3ZD1 A;  5FO8 C;  5JPM G;  4PZ5 A;  3SW0 X;  1E88 A;  2A55 A;  4IGD A;  2WII C;  1ELV A;  1E8B A;  2MCZ A;  2IZ4 A;  3EJH A;  1HFH A;  2V8E A;  3M7P A;  2CG6 A;  4AYE A;  4FXG G;  4WJG 2;  1QO6 A;  3T5O A;  3L89 M;  2CG7 A;  3ERB A;  4MUC A;  2JRA A;  3IU3 I;  2IZ3 A;  4AYD A;  5HYT B;  2RL0 A;  4ZH1 D;  1GKG A;  3ZD2 A;  1OK2 A;  2JGW A;  2YBY A;  3NFP I;  1O9A A;  1GHQ B;  3RJ3 D;  3GOV A;  2XWJ I;  4KKD A;  1SRZ A;  1HFI A;  2EC3 A;  1TPG A;  4YNX A;  4B2S A;  4CSY A;  5I0Q B;  2XWB F;  3KZJ A;  1GPZ A;  4J38 B;  4AYI A;  2XRB A;  1H04 P;  2B5I D;  1G4F A;  1TPM A;  4DJZ A;  1OJV A;  1PPQ A;  1U5M A;  4K12 A;  1MD8 A;  2W80 A;  4JHS A;  2BZM A;  1H2Q P;  1C1Z A;  1FBR A;  1SS2 A;  2LOJ A;  2ERJ A;  2RLP A;  4LOS A;  5HYU B;  1CKL A;  2RKZ A;  1H03 P;  2O39 C;  1NWV A;  1OJY A;  3INB C;  4B2R A;  1E5G A;  1H2P P;  3TVJ A;  3ZRZ A;  2G7I A;  4F4O C;  1VVC A;  4ONT D;  2KMS A;  1UOT P;  3IX0 A;  1QGB A;  2EHF A;  2KRI A;  1OK9 A;  3OED C;  1GKN A;  1Q3X A;  2RKY A;  5HZP B;  1OJW A;  2CKU A;  1LY2 A;  2XRD A;  3MQL A;  2JGX A;  2YRA A;  2XQW C;  2UWN A;  5HYP A;  3O8E B;  3KXV A;  1OK3 A;  4LOT A;  2W81 A;  4AYM A;  1VVD A;  1ZJK A;  1OK1 A;  3R62 A;  1HCC A;  4A5W B;  2QY0 A;  1MD7 A;  1G4G A;  3CAL A;  4C16 A;  1QUB A;  1TPN A;  2RLQ A;  3OXU D;  3OP8 A;  2MCY A; 
#chains in the Genus database with same CATH topology
 3GXE A;  1Z92 B;  3ZD1 A;  3F6K A;  5FO8 C;  5JPM G;  4PZ5 A;  3SW0 X;  1E88 A;  3CI0 J;  2A55 A;  4IGD A;  2WII C;  1ELV A;  1E8B A;  2MCZ A;  2IZ4 A;  3EJH A;  1HFH A;  2V8E A;  3M7P A;  2CG6 A;  4APL A;  4AYE A;  4FXG G;  4WJG 2;  1QO6 A;  3T5O A;  3L89 M;  2CG7 A;  3ERB A;  4MUC A;  2JRA A;  5DN4 A;  3IU3 I;  3ZLD A;  2IZ3 A;  2I2L A;  4AYD A;  5HYT B;  2RL0 A;  4ZH1 D;  1GKG A;  3ZD2 A;  1OK2 A;  2JGW A;  2YBY A;  3NFP I;  1O9A A;  1GHQ B;  3RJ3 D;  3GOV A;  2XWJ I;  4KKD A;  1SRZ A;  1HFI A;  3WSY A;  2EC3 A;  1TPG A;  4YNX A;  4B2S A;  4CSY A;  5I0Q B;  2XWB F;  3KZJ A;  1GPZ A;  4J38 B;  4AYI A;  2XRB A;  3ZLE A;  4MSL A;  3FGT A;  2Y8S A;  1H04 P;  2B5I D;  1G4F A;  1TPM A;  4DJZ A;  1OJV A;  1PPQ A;  1U5M A;  4K12 A;  1MD8 A;  2X2Z A;  2W80 A;  2Y8T A;  4JHS A;  3FGR A;  2BZM A;  1H2Q P;  2ZYC A;  1C1Z A;  1FBR A;  1SS2 A;  2LOJ A;  2ERJ A;  2RLP A;  4LOS A;  3VWO A;  5HYU B;  1CKL A;  2RKZ A;  1H03 P;  2O39 C;  1NWV A;  1OJY A;  3INB C;  4B2R A;  1E5G A;  1H2P P;  3TVJ A;  3ZRZ A;  2G7I A;  4F4O C;  1VVC A;  4ONT D;  2KMS A;  1UOT P;  3IX0 A;  3WSX A;  1QGB A;  2EHF A;  2KRI A;  1OK9 A;  3K3T A;  3OED C;  1GKN A;  1Q3X A;  2RKY A;  5HZP B;  1OJW A;  2CKU A;  1LY2 A;  4YIZ A;  2XRD A;  2Y8R A;  3MQL A;  4BWC A;  2JGX A;  2YRA A;  2XQW C;  2UWN A;  5HYP A;  5DN5 A;  3O8E B;  3KXV A;  1OK3 A;  3NJA A;  4LOT A;  2W81 A;  4AYM A;  4PO7 A;  1VVD A;  1ZJK A;  1OK1 A;  3R62 A;  1HCC A;  4A5W B;  1RLH A;  2QY0 A;  1MD7 A;  1G4G A;  3CAL A;  4C16 A;  1QUB A;  1TPN A;  2RLQ A;  3OXU D;  4N7E A;  3OP8 A;  2MCY A; 
#chains in the Genus database with same CATH homology
 3GXE A;  1Z92 B;  3ZD1 A;  5FO8 C;  5JPM G;  4PZ5 A;  3SW0 X;  1E88 A;  2A55 A;  4IGD A;  2WII C;  1ELV A;  1E8B A;  2MCZ A;  2IZ4 A;  3EJH A;  1HFH A;  2V8E A;  3M7P A;  2CG6 A;  4AYE A;  4FXG G;  4WJG 2;  1QO6 A;  3T5O A;  3L89 M;  2CG7 A;  3ERB A;  4MUC A;  2JRA A;  3IU3 I;  2IZ3 A;  4AYD A;  5HYT B;  2RL0 A;  4ZH1 D;  1GKG A;  3ZD2 A;  1OK2 A;  2JGW A;  2YBY A;  3NFP I;  1O9A A;  1GHQ B;  3RJ3 D;  3GOV A;  2XWJ I;  4KKD A;  1SRZ A;  1HFI A;  2EC3 A;  1TPG A;  4YNX A;  4B2S A;  4CSY A;  5I0Q B;  2XWB F;  3KZJ A;  1GPZ A;  4J38 B;  4AYI A;  2XRB A;  1H04 P;  2B5I D;  1G4F A;  1TPM A;  4DJZ A;  1OJV A;  1PPQ A;  1U5M A;  4K12 A;  1MD8 A;  2W80 A;  4JHS A;  2BZM A;  1H2Q P;  1C1Z A;  1FBR A;  1SS2 A;  2LOJ A;  2ERJ A;  2RLP A;  4LOS A;  5HYU B;  1CKL A;  2RKZ A;  1H03 P;  2O39 C;  1NWV A;  1OJY A;  3INB C;  4B2R A;  1E5G A;  1H2P P;  3TVJ A;  3ZRZ A;  2G7I A;  4F4O C;  1VVC A;  4ONT D;  2KMS A;  1UOT P;  3IX0 A;  1QGB A;  2EHF A;  2KRI A;  1OK9 A;  3OED C;  1GKN A;  1Q3X A;  2RKY A;  5HZP B;  1OJW A;  2CKU A;  1LY2 A;  2XRD A;  3MQL A;  2JGX A;  2YRA A;  2XQW C;  2UWN A;  5HYP A;  3O8E B;  3KXV A;  1OK3 A;  4LOT A;  2W81 A;  4AYM A;  1VVD A;  1ZJK A;  1OK1 A;  3R62 A;  1HCC A;  4A5W B;  2QY0 A;  1MD7 A;  1G4G A;  3CAL A;  4C16 A;  1QUB A;  1TPN A;  2RLQ A;  3OXU D;  3OP8 A;  2MCY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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