1R3BA

Solution structure of xenopus laevis mob1
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
202
structure length
202
Chain Sequence
MGSSHHHHHHSSGLVPRGSATLGSGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTESTCSVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDAVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title NMR solution structure of Mob1, a mitotic exit network protein and its interaction with an NDR kinase peptide
pubmed doi rcsb
molecule tags Cell cycle
source organism Xenopus laevis
molecule keywords MOB1
total genus 39
structure length 202
sequence length 202
ec nomenclature
pdb deposition date 2003-10-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03637 Mob1_phocein Mob1/phocein family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.30 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 MOB kinase activator 1r3bA01
2HJNA 4JIZA 4LQQB 5BRMA 1PI1A 5B5VA 1R3BA 5B6BA 5BRKA 4J1VA 5B5WA 4LQSB
chains in the Genus database with same CATH superfamily
2YYJA 3BNGA 1FS9A 1GU6A 2CJ4A 2OEXA 3X0XA 1PI1A 3OWAA 1SK6A 3MMOA 4DZYA 3TZ2A 3BNHA 2R03A 3CRLA 3SXQA 2BU7A 1QDBA 4Q0TA 4HKRA 2ZO5A 3S7WA 2XS1A 2IX6A 3MDEA 3NF4A 1X8ZA 2BTZA 2EC5A 2ZKJA 3SF6A 2LFWA 3EOMA 1EGDA 1FS8A 3L1TA 3UBRA 4N5FA 4L3ZA 4Q17A 4L38A 1XFXA 2YGWA 1GKZA 4E02A 3KMLA 5GJWE 2C12A 4FZ4A 4IRNA 4Q5BA 3BNFA 3MPJA 3D2RA 4RM7A 4FF1A 3VKGA 3UU9A 3N0RA 3Q0AA 3R7KA 4G97A 2E81A 1LVCA 1XFUA 1RJ4A 3EONA 3P4TA 3MKHA 4KSFA 4AKHA 3D9DA 1R3BA 4H81A 4X28A 4MPEA 1X90A 2OJQA 2JBRA 4G5EA 4MP7A 1PK0A 1GKXA 2PO4A 3OIBA 3TZ4A 3D9FA 3Q23A 2EBHX 2CX9A 3D9EA 3OWMA 1WS9A 3VADA 5B5WA 1U8VA 2OEVA 2GBBA 1UKWA 5J6AA 1R2JA 5M4KA 4OO2A 3X29A 1OAHA 1T9GA 2XS8A 3D1IA 4IV6A 4MPCA 1FS7A 1K90A 1Y8OA 4ZYJA 2BU5A 1Y8NA 1XFYA 2ZAFA 4JIZA 4P13A 4F0XA 5B6BA 4AI6A 3Q24A 1EGEA 2OR0A 1SC5A 3C2PA 4FF2A 2RDZA 2EBAA 5K3GA 4X28C 2RF7A 2YYMA 4LQQB 5M4NA 3SWOA 2D29A 2EBFX 5B5VA 3GQTA 4HKSA 2BU2A 3SCEA 4MP2A 2DVLA 2RFQA 3CE2A 2OT4A 3TORA 2FP1A 4H85A 4QICA 4KCFA 3AFEA 4KTOA 2Q8FA 2XQRB 4NXLA 4V26A 3LGQA 2FP2A 2BU8A 2WBIA 1SIRA 3GNCA 4KSAA 4U83A 1SIQA 4W9UA 4FF4A 4E00A 5J71A 1IS2A 1XFWA 2R05A 3D6BA 2Q8HA 1RP3A 4H7QA 2REHA 2JBTA 4P79A 3GM6A 3LG1A 5GJVE 3HWCA 3MXLA 1GJVA 2YYKA 3F29A 3VKHA 1S26A 3AFFA 4V25A 5M4MA 1BUCA 2CJ5A 2PG0A 3M9VA 4KS9A 2C0UA 5M4PA 3Q22A 4FF3A 5K3HA 1XFVA 2VR0A 3FCJA 2JIFA 4HR3A 2A1TA 3C46A 5BRKA 3PFDA 4M9AA 1XFZA 4J1VA 3C3LA 2JBSA 1IVHA 2E80A 2AO2A 4MPNA 2HJNA 2F6LA 2ZDXA 5BRMA 4DOYA 1JQIA 2CJ6A 2BU6A 2YYLA 3MPIA 4AKGA 1K8TA 4Q5CA 2CJ7A 2E0AA 3TZ0A 2DDHA 1RJ1A 1XG2B 2FONA 3FO3A 4JEKA 4ZXVA 1X91A 3TZ5A 3X0YA 1Y8PA 4Q1OA 4L3YA 2Q8IA 2CJ8A 2VIGA 4XVXA 2R02A 3RKHA 3TTBA 2ZDYA 4WJYA 3B96A 3II9A 1RX0A 2UXWA 4O5MA 3CRKA 1Y0VA 3D9GA 2AZEA 2QR4A 2Z1QA 2R0MA 2IX5A 4JIOA 2VF1A 4L3XA 4L1FA 4LQSB 5K3JA 2YYIA 5K3IA 3MDDA 4Q4UA 1W07A 2R0NA 1EGCA 3BNJA 2Q8GA 2J7AA 1JM6A 1UDYA 2YYGA 1K93A 4AKIA 4E01A 2PNRA
chains in the Genus database with same CATH topology
2HJNA 4JIZA 4LQQB 5BRMA 1PI1A 5B5VA 1R3BA 5B6BA 5BRKA 4J1VA 5B5WA 4LQSB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HJN A;  4JIZ A;  4LQQ B;  5BRM A;  1PI1 A;  5B5V A;  1R3B A;  5B6B A;  5BRK A;  4J1V A;  5B5W A;  4LQS B; 
#chains in the Genus database with same CATH topology
 2YYJ A;  3BNG A;  1FS9 A;  1GU6 A;  2CJ4 A;  2OEX A;  3X0X A;  1PI1 A;  3OWA A;  1SK6 A;  3MMO A;  4DZY A;  3TZ2 A;  3BNH A;  2R03 A;  3CRL A;  3SXQ A;  2BU7 A;  1QDB A;  4Q0T A;  4HKR A;  2ZO5 A;  3S7W A;  2XS1 A;  2IX6 A;  3MDE A;  3NF4 A;  1X8Z A;  2BTZ A;  2EC5 A;  2ZKJ A;  3SF6 A;  2LFW A;  3EOM A;  1EGD A;  1FS8 A;  3L1T A;  3UBR A;  4N5F A;  4L3Z A;  4Q17 A;  4L38 A;  1XFX A;  2YGW A;  1GKZ A;  4E02 A;  3KML A;  5GJW E;  2C12 A;  4FZ4 A;  4IRN A;  4Q5B A;  3BNF A;  3MPJ A;  3D2R A;  4RM7 A;  4FF1 A;  3VKG A;  3UU9 A;  3N0R A;  3Q0A A;  3R7K A;  4G97 A;  2E81 A;  1LVC A;  1XFU A;  1RJ4 A;  3EON A;  3P4T A;  3MKH A;  4KSF A;  4AKH A;  3D9D A;  1R3B A;  4H81 A;  4X28 A;  4MPE A;  1X90 A;  2OJQ A;  2JBR A;  4G5E A;  4MP7 A;  1PK0 A;  1GKX A;  2PO4 A;  3OIB A;  3TZ4 A;  3D9F A;  3Q23 A;  2EBH X;  2CX9 A;  3D9E A;  3OWM A;  1WS9 A;  3VAD A;  5B5W A;  1U8V A;  2OEV A;  2GBB A;  1UKW A;  5J6A A;  1R2J A;  5M4K A;  4OO2 A;  3X29 A;  1OAH A;  1T9G A;  2XS8 A;  3D1I A;  4IV6 A;  4MPC A;  1FS7 A;  1K90 A;  1Y8O A;  4ZYJ A;  2BU5 A;  1Y8N A;  1XFY A;  2ZAF A;  4JIZ A;  4P13 A;  4F0X A;  5B6B A;  4AI6 A;  3Q24 A;  1EGE A;  2OR0 A;  1SC5 A;  3C2P A;  4FF2 A;  2RDZ A;  2EBA A;  5K3G A;  4X28 C;  2RF7 A;  2YYM A;  4LQQ B;  5M4N A;  3SWO A;  2D29 A;  2EBF X;  5B5V A;  3GQT A;  4HKS A;  2BU2 A;  3SCE A;  4MP2 A;  2DVL A;  2RFQ A;  3CE2 A;  2OT4 A;  3TOR A;  2FP1 A;  4H85 A;  4QIC A;  4KCF A;  3AFE A;  4KTO A;  2Q8F A;  2XQR B;  4NXL A;  4V26 A;  3LGQ A;  2FP2 A;  2BU8 A;  2WBI A;  1SIR A;  3GNC A;  4KSA A;  4U83 A;  1SIQ A;  4W9U A;  4FF4 A;  4E00 A;  5J71 A;  1IS2 A;  1XFW A;  2R05 A;  3D6B A;  2Q8H A;  1RP3 A;  4H7Q A;  2REH A;  2JBT A;  4P79 A;  3GM6 A;  3LG1 A;  5GJV E;  3HWC A;  3MXL A;  1GJV A;  2YYK A;  3F29 A;  3VKH A;  1S26 A;  3AFF A;  4V25 A;  5M4M A;  1BUC A;  2CJ5 A;  2PG0 A;  3M9V A;  4KS9 A;  2C0U A;  5M4P A;  3Q22 A;  4FF3 A;  5K3H A;  1XFV A;  2VR0 A;  3FCJ A;  2JIF A;  4HR3 A;  2A1T A;  3C46 A;  5BRK A;  3PFD A;  4M9A A;  1XFZ A;  4J1V A;  3C3L A;  2JBS A;  1IVH A;  2E80 A;  2AO2 A;  4MPN A;  2HJN A;  2F6L A;  2ZDX A;  5BRM A;  4DOY A;  1JQI A;  2CJ6 A;  2BU6 A;  2YYL A;  3MPI A;  4AKG A;  1K8T A;  4Q5C A;  2CJ7 A;  2E0A A;  3TZ0 A;  2DDH A;  1RJ1 A;  1XG2 B;  2FON A;  3FO3 A;  4JEK A;  4ZXV A;  1X91 A;  3TZ5 A;  3X0Y A;  1Y8P A;  4Q1O A;  4L3Y A;  2Q8I A;  2CJ8 A;  2VIG A;  4XVX A;  2R02 A;  3RKH A;  3TTB A;  2ZDY A;  4WJY A;  3B96 A;  3II9 A;  1RX0 A;  2UXW A;  4O5M A;  3CRK A;  1Y0V A;  3D9G A;  2AZE A;  2QR4 A;  2Z1Q A;  2R0M A;  2IX5 A;  4JIO A;  2VF1 A;  4L3X A;  4L1F A;  4LQS B;  5K3J A;  2YYI A;  5K3I A;  3MDD A;  4Q4U A;  1W07 A;  2R0N A;  1EGC A;  3BNJ A;  2Q8G A;  2J7A A;  1JM6 A;  1UDY A;  2YYG A;  1K93 A;  4AKI A;  4E01 A;  2PNR A; 
#chains in the Genus database with same CATH homology
 2HJN A;  4JIZ A;  4LQQ B;  5BRM A;  1PI1 A;  5B5V A;  1R3B A;  5B6B A;  5BRK A;  4J1V A;  5B5W A;  4LQS B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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