4U83A

Structure of brucella abortus butyryl-coa dehydrogenase
Total Genus 139
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
379
structure length
371
Chain Sequence
HHHHMLLTDTQEQIREAARDFAQERLAPGAAARDREHAFPRAELTEMGALGFLGMLAPEEWGGSDLDMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEWIGGFALTEPLKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRIETARQMVLHAAALREAGKPCLTEASMAKLVASEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Acyl-CoA dehydrogenase
publication title Structure of Butyryl-CoA dehydrogenase from Brucella Abortus.
rcsb
source organism Brucella abortus
total genus 139
structure length 371
sequence length 379
chains with identical sequence B, C, D
ec nomenclature ec 1.3.99.2: Transferred entry: 1.3.8.1.
pdb deposition date 2014-07-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 4u83A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 4u83A03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 4u83A02
4L3ZA 3BNJA 1RX0A 3NF4A 4DOYA 5K3GA 3LG1A 2WBIA 2YYLA 3MKHA 5K3HA 5K3IA 4X28C 1IVHA 2VIGA 2R0NA 3MDDA 3M9VA 2YYGA 3SWOA 1W07A 4IV6A 4Q5BA 2IX6A 3AFFA 4Q5CA 2REHA 1R2JA 3EONA 3II9A 3UU9A 4L1FA 4JEKA 4XVXA 2YYKA 2A1TA 4L3YA 2Z1QA 4Q0TA 2DDHA 3MXLA 4W9UA 1SIRA 4U83A 3GM6A 2J7AA 2VR0A 4OO2A 2C0UA 3UBRA 1UKWA 1WS9A 2EBAA 4G5EA 2OT4A 1EGDA 1T9GA 3FCJA 3D9FA 3D9EA 1FS9A 3SF6A 2ZO5A 2OR0A 3D9GA 3P4TA 4X28A 1BUCA 2ZAFA 2JBSA 2YYJA 2DVLA 2E81A 3D6BA 3MDEA 3PFDA 4N5FA 4HR3A 3BNFA 2CX9A 4M9AA 1GU6A 3R7KA 4Q1OA 3L1TA 3OWMA 3X0YA 3BNHA 2E80A 2C12A 1FS8A 2RF7A 3BNGA 3TTBA 3MPJA 3MMOA 2RFQA 3HWCA 3FO3A 1JQIA 4ZXVA 3EOMA 3X0XA 3SXQA 4L38A 5K3JA 4KCFA 2PG0A 3F29A 3S7WA 1EGCA 4KTOA 4RM7A 3RKHA 2JIFA 3D1IA 4Q17A 2UXWA 3GNCA 4IRNA 3D9DA 1U8VA 2YYIA 3B96A 2JBRA 4NXLA 4O5MA 3LGQA 1QDBA 3TORA 2IX5A 4ZYJA 1FS7A 1EGEA 4WJYA 2R0MA 3AFEA 2YYMA 4L3XA 2JBTA 2RDZA 3OIBA 4P13A 1IS2A 3OWAA 3MPIA 1OAHA 4Q4UA 1UDYA 3SCEA 2D29A 2FONA 3GQTA 1SIQA
chains in the Genus database with same CATH superfamily
4QICA 4E02A 2R02A 1Y8NA 4L3ZA 3BNJA 1S26A 1GKZA 2Q8FA 1RX0A 3NF4A 4DOYA 5K3GA 2ZDYA 3LG1A 1SK6A 2WBIA 2BTZA 1SC5A 2YYLA 3MKHA 1GJVA 5K3HA 3TZ0A 4AKIA 5BRKA 1K8TA 5K3IA 4X28C 2EBHX 1IVHA 2VIGA 2Q8HA 2R0NA 3MDDA 1Y0VA 3M9VA 1K93A 2YYGA 4FF4A 1X8ZA 1XFVA 3SWOA 2R03A 1W07A 4IV6A 4Q5BA 2IX6A 3AFFA 4E01A 1PI1A 4KS9A 4JIZA 2REHA 4Q5CA 4HKSA 4AKHA 1R2JA 5BRMA 1Y8PA 3EONA 2OEXA 4LQQB 3II9A 4MP7A 3UU9A 2R05A 4DZYA 4L1FA 4JEKA 4XVXA 2YYKA 2A1TA 4L3YA 2Z1QA 4MPCA 2DDHA 2EC5A 4Q0TA 2AO2A 5EZ3A 4J1VA 3MXLA 4W9UA 3N0RA 3C2PA 1SIRA 4G97A 4U83A 5B5WA 3GM6A 2GBBA 2J7AA 2VR0A 2C0UA 4OO2A 3UBRA 1UKWA 1WS9A 2EBAA 1GKXA 1X90A 4G5EA 4HKRA 2OT4A 1EGDA 1T9GA 2VF1A 4E00A 2EBFX 2CJ6A 5J71A 3FCJA 4JIOA 3D9FA 1RJ1A 2BU6A 3D9EA 2OJQA 1FS9A 4V25A 5B5VA 3VADA 3SF6A 2ZO5A 2OR0A 3D9GA 4FZ4A 3P4TA 4X28A 2Q8IA 1BUCA 2ZAFA 2JBSA 2CJ4A 3TZ4A 2YYJA 2CJ8A 1Y8OA 4V26A 1PK0A 1XFWA 5B6BA 2DVLA 2E81A 4KSFA 3KMLA 3D6BA 4FF1A 4AI6A 5GJVE 3MDEA 1RP3A 3C46A 1X91A 3PFDA 4N5FA 2BU2A 5M4MA 4HR3A 2BU5A 2YGWA 3BNFA 2FP2A 2CX9A 4M9AA 1GU6A 3R7KA 4Q1OA 3L1TA 2PNRA 3OWMA 4MPEA 2ZKJA 3X0YA 3BNHA 4FF3A 3CE2A 2E80A 2C12A 1FS8A 2RF7A 4MPNA 3BNGA 1XFUA 3TTBA 3MPJA 3MMOA 2RFQA 3HWCA 4H7QA 3Q24A 5GJWE 3Q23A 2FP1A 3C3LA 3FO3A 1JQIA 4ZXVA 3D2RA 3EOMA 3X0XA 2XS1A 4L38A 5K3JA 1XFYA 3SXQA 3TZ2A 3VKGA 4KCFA 2PG0A 2HJNA 5M4PA 3F29A 3Q0AA 2BU8A 3S7WA 1EGCA 4KTOA 4RM7A 1XG2B 5M4NA 4H85A 2E0AA 2Q8GA 2LFWA 3RKHA 3TZ5A 2JIFA 1LVCA 3D1IA 2OEVA 4Q17A 2UXWA 1JM6A 3GNCA 4IRNA 4LQSB 5M4KA 2PO4A 4KSAA 3D9DA 1U8VA 1XFXA 2BU7A 1R3BA 1XFZA 2YYIA 3B96A 2JBRA 4NXLA 4O5MA 4H81A 3LGQA 4FF2A 1QDBA 2XS8A 3TORA 2QR4A 3DJLA 2IX5A 4P79A 4MP2A 3CRLA 4ZYJA 4F0XA 4AKGA 2XQRB 1K90A 5J6AA 1FS7A 1EGEA 4WJYA 2R0MA 3AFEA 2AZEA 2YYMA 4L3XA 2CJ7A 2JBTA 2CJ5A 3Q22A 3X29A 2RDZA 2ZDXA 3OIBA 3CRKA 3VKHA 2F6LA 4P13A 1IS2A 3OWAA 3MPIA 1OAHA 1RJ4A 1UDYA 4Q4UA 3U33A 3SCEA 2D29A 2FONA 3GQTA 1SIQA
chains in the Genus database with same CATH topology
4L3ZA 3BNJA 1RX0A 3NF4A 4DOYA 5K3GA 3LG1A 2WBIA 2YYLA 3MKHA 5K3HA 5K3IA 4X28C 1IVHA 2VIGA 2R0NA 3MDDA 3M9VA 2YYGA 3SWOA 1W07A 4IV6A 4Q5BA 2IX6A 3AFFA 4Q5CA 2REHA 1R2JA 3EONA 3II9A 3UU9A 4L1FA 4JEKA 4XVXA 2YYKA 2A1TA 4L3YA 2Z1QA 4Q0TA 2DDHA 3MXLA 4W9UA 1SIRA 4U83A 3GM6A 2J7AA 2VR0A 4OO2A 2C0UA 3UBRA 1UKWA 1WS9A 2EBAA 4G5EA 2OT4A 1EGDA 1T9GA 3FCJA 3D9FA 3D9EA 1FS9A 3SF6A 2ZO5A 2OR0A 3D9GA 3P4TA 4X28A 1BUCA 2ZAFA 2JBSA 2YYJA 2DVLA 2E81A 3D6BA 3MDEA 3PFDA 4N5FA 4HR3A 3BNFA 2CX9A 4M9AA 1GU6A 3R7KA 4Q1OA 3L1TA 3OWMA 3X0YA 3BNHA 2E80A 2C12A 1FS8A 2RF7A 3BNGA 3TTBA 3MPJA 3MMOA 2RFQA 3HWCA 3FO3A 1JQIA 4ZXVA 3EOMA 3X0XA 3SXQA 4L38A 5K3JA 4KCFA 2PG0A 3F29A 3S7WA 1EGCA 4KTOA 4RM7A 3RKHA 2JIFA 3D1IA 4Q17A 2UXWA 3GNCA 4IRNA 3D9DA 1U8VA 2YYIA 3B96A 2JBRA 4NXLA 4O5MA 3LGQA 1QDBA 3TORA 2IX5A 4ZYJA 1FS7A 1EGEA 4WJYA 2R0MA 3AFEA 2YYMA 4L3XA 2JBTA 2RDZA 3OIBA 4P13A 1IS2A 3OWAA 3MPIA 1OAHA 4Q4UA 1UDYA 3SCEA 2D29A 2FONA 3GQTA 1SIQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4L3Z A;  3BNJ A;  1RX0 A;  3NF4 A;  4DOY A;  5K3G A;  3LG1 A;  2WBI A;  2YYL A;  3MKH A;  5K3H A;  5K3I A;  4X28 C;  1IVH A;  2VIG A;  2R0N A;  3MDD A;  3M9V A;  2YYG A;  3SWO A;  1W07 A;  4IV6 A;  4Q5B A;  2IX6 A;  3AFF A;  4Q5C A;  2REH A;  1R2J A;  3EON A;  3II9 A;  3UU9 A;  4L1F A;  4JEK A;  4XVX A;  2YYK A;  2A1T A;  4L3Y A;  2Z1Q A;  4Q0T A;  2DDH A;  3MXL A;  4W9U A;  1SIR A;  4U83 A;  3GM6 A;  2J7A A;  2VR0 A;  4OO2 A;  2C0U A;  3UBR A;  1UKW A;  1WS9 A;  2EBA A;  4G5E A;  2OT4 A;  1EGD A;  1T9G A;  3FCJ A;  3D9F A;  3D9E A;  1FS9 A;  3SF6 A;  2ZO5 A;  2OR0 A;  3D9G A;  3P4T A;  4X28 A;  1BUC A;  2ZAF A;  2JBS A;  2YYJ A;  2DVL A;  2E81 A;  3D6B A;  3MDE A;  3PFD A;  4N5F A;  4HR3 A;  3BNF A;  2CX9 A;  4M9A A;  1GU6 A;  3R7K A;  4Q1O A;  3L1T A;  3OWM A;  3X0Y A;  3BNH A;  2E80 A;  2C12 A;  1FS8 A;  2RF7 A;  3BNG A;  3TTB A;  3MPJ A;  3MMO A;  2RFQ A;  3HWC A;  3FO3 A;  1JQI A;  4ZXV A;  3EOM A;  3X0X A;  3SXQ A;  4L38 A;  5K3J A;  4KCF A;  2PG0 A;  3F29 A;  3S7W A;  1EGC A;  4KTO A;  4RM7 A;  3RKH A;  2JIF A;  3D1I A;  4Q17 A;  2UXW A;  3GNC A;  4IRN A;  3D9D A;  1U8V A;  2YYI A;  3B96 A;  2JBR A;  4NXL A;  4O5M A;  3LGQ A;  1QDB A;  3TOR A;  2IX5 A;  4ZYJ A;  1FS7 A;  1EGE A;  4WJY A;  2R0M A;  3AFE A;  2YYM A;  4L3X A;  2JBT A;  2RDZ A;  3OIB A;  4P13 A;  1IS2 A;  3OWA A;  3MPI A;  1OAH A;  4Q4U A;  1UDY A;  3SCE A;  2D29 A;  2FON A;  3GQT A;  1SIQ A; 
#chains in the Genus database with same CATH topology
 4QIC A;  4E02 A;  2R02 A;  1Y8N A;  4L3Z A;  3BNJ A;  1S26 A;  1GKZ A;  2Q8F A;  1RX0 A;  3NF4 A;  4DOY A;  5K3G A;  2ZDY A;  3LG1 A;  1SK6 A;  2WBI A;  2BTZ A;  1SC5 A;  2YYL A;  3MKH A;  1GJV A;  5K3H A;  3TZ0 A;  4AKI A;  5BRK A;  1K8T A;  5K3I A;  4X28 C;  2EBH X;  1IVH A;  2VIG A;  2Q8H A;  2R0N A;  3MDD A;  1Y0V A;  3M9V A;  1K93 A;  2YYG A;  4FF4 A;  1X8Z A;  1XFV A;  3SWO A;  2R03 A;  1W07 A;  4IV6 A;  4Q5B A;  2IX6 A;  3AFF A;  4E01 A;  1PI1 A;  4KS9 A;  4JIZ A;  2REH A;  4Q5C A;  4HKS A;  4AKH A;  1R2J A;  5BRM A;  1Y8P A;  3EON A;  2OEX A;  4LQQ B;  3II9 A;  4MP7 A;  3UU9 A;  2R05 A;  4DZY A;  4L1F A;  4JEK A;  4XVX A;  2YYK A;  2A1T A;  4L3Y A;  2Z1Q A;  4MPC A;  2DDH A;  2EC5 A;  4Q0T A;  2AO2 A;  5EZ3 A;  4J1V A;  3MXL A;  4W9U A;  3N0R A;  3C2P A;  1SIR A;  4G97 A;  4U83 A;  5B5W A;  3GM6 A;  2GBB A;  2J7A A;  2VR0 A;  2C0U A;  4OO2 A;  3UBR A;  1UKW A;  1WS9 A;  2EBA A;  1GKX A;  1X90 A;  4G5E A;  4HKR A;  2OT4 A;  1EGD A;  1T9G A;  2VF1 A;  4E00 A;  2EBF X;  2CJ6 A;  5J71 A;  3FCJ A;  4JIO A;  3D9F A;  1RJ1 A;  2BU6 A;  3D9E A;  2OJQ A;  1FS9 A;  4V25 A;  5B5V A;  3VAD A;  3SF6 A;  2ZO5 A;  2OR0 A;  3D9G A;  4FZ4 A;  3P4T A;  4X28 A;  2Q8I A;  1BUC A;  2ZAF A;  2JBS A;  2CJ4 A;  3TZ4 A;  2YYJ A;  2CJ8 A;  1Y8O A;  4V26 A;  1PK0 A;  1XFW A;  5B6B A;  2DVL A;  2E81 A;  4KSF A;  3KML A;  3D6B A;  4FF1 A;  4AI6 A;  5GJV E;  3MDE A;  1RP3 A;  3C46 A;  1X91 A;  3PFD A;  4N5F A;  2BU2 A;  5M4M A;  4HR3 A;  2BU5 A;  2YGW A;  3BNF A;  2FP2 A;  2CX9 A;  4M9A A;  1GU6 A;  3R7K A;  4Q1O A;  3L1T A;  2PNR A;  3OWM A;  4MPE A;  2ZKJ A;  3X0Y A;  3BNH A;  4FF3 A;  3CE2 A;  2E80 A;  2C12 A;  1FS8 A;  2RF7 A;  4MPN A;  3BNG A;  1XFU A;  3TTB A;  3MPJ A;  3MMO A;  2RFQ A;  3HWC A;  4H7Q A;  3Q24 A;  5GJW E;  3Q23 A;  2FP1 A;  3C3L A;  3FO3 A;  1JQI A;  4ZXV A;  3D2R A;  3EOM A;  3X0X A;  2XS1 A;  4L38 A;  5K3J A;  1XFY A;  3SXQ A;  3TZ2 A;  3VKG A;  4KCF A;  2PG0 A;  2HJN A;  5M4P A;  3F29 A;  3Q0A A;  2BU8 A;  3S7W A;  1EGC A;  4KTO A;  4RM7 A;  1XG2 B;  5M4N A;  4H85 A;  2E0A A;  2Q8G A;  2LFW A;  3RKH A;  3TZ5 A;  2JIF A;  1LVC A;  3D1I A;  2OEV A;  4Q17 A;  2UXW A;  1JM6 A;  3GNC A;  4IRN A;  4LQS B;  5M4K A;  2PO4 A;  4KSA A;  3D9D A;  1U8V A;  1XFX A;  2BU7 A;  1R3B A;  1XFZ A;  2YYI A;  3B96 A;  2JBR A;  4NXL A;  4O5M A;  4H81 A;  3LGQ A;  4FF2 A;  1QDB A;  2XS8 A;  3TOR A;  2QR4 A;  3DJL A;  2IX5 A;  4P79 A;  4MP2 A;  3CRL A;  4ZYJ A;  4F0X A;  4AKG A;  2XQR B;  1K90 A;  5J6A A;  1FS7 A;  1EGE A;  4WJY A;  2R0M A;  3AFE A;  2AZE A;  2YYM A;  4L3X A;  2CJ7 A;  2JBT A;  2CJ5 A;  3Q22 A;  3X29 A;  2RDZ A;  2ZDX A;  3OIB A;  3CRK A;  3VKH A;  2F6L A;  4P13 A;  1IS2 A;  3OWA A;  3MPI A;  1OAH A;  1RJ4 A;  1UDY A;  4Q4U A;  3U33 A;  3SCE A;  2D29 A;  2FON A;  3GQT A;  1SIQ A; 
#chains in the Genus database with same CATH homology
 4L3Z A;  3BNJ A;  1RX0 A;  3NF4 A;  4DOY A;  5K3G A;  3LG1 A;  2WBI A;  2YYL A;  3MKH A;  5K3H A;  5K3I A;  4X28 C;  1IVH A;  2VIG A;  2R0N A;  3MDD A;  3M9V A;  2YYG A;  3SWO A;  1W07 A;  4IV6 A;  4Q5B A;  2IX6 A;  3AFF A;  4Q5C A;  2REH A;  1R2J A;  3EON A;  3II9 A;  3UU9 A;  4L1F A;  4JEK A;  4XVX A;  2YYK A;  2A1T A;  4L3Y A;  2Z1Q A;  4Q0T A;  2DDH A;  3MXL A;  4W9U A;  1SIR A;  4U83 A;  3GM6 A;  2J7A A;  2VR0 A;  4OO2 A;  2C0U A;  3UBR A;  1UKW A;  1WS9 A;  2EBA A;  4G5E A;  2OT4 A;  1EGD A;  1T9G A;  3FCJ A;  3D9F A;  3D9E A;  1FS9 A;  3SF6 A;  2ZO5 A;  2OR0 A;  3D9G A;  3P4T A;  4X28 A;  1BUC A;  2ZAF A;  2JBS A;  2YYJ A;  2DVL A;  2E81 A;  3D6B A;  3MDE A;  3PFD A;  4N5F A;  4HR3 A;  3BNF A;  2CX9 A;  4M9A A;  1GU6 A;  3R7K A;  4Q1O A;  3L1T A;  3OWM A;  3X0Y A;  3BNH A;  2E80 A;  2C12 A;  1FS8 A;  2RF7 A;  3BNG A;  3TTB A;  3MPJ A;  3MMO A;  2RFQ A;  3HWC A;  3FO3 A;  1JQI A;  4ZXV A;  3EOM A;  3X0X A;  3SXQ A;  4L38 A;  5K3J A;  4KCF A;  2PG0 A;  3F29 A;  3S7W A;  1EGC A;  4KTO A;  4RM7 A;  3RKH A;  2JIF A;  3D1I A;  4Q17 A;  2UXW A;  3GNC A;  4IRN A;  3D9D A;  1U8V A;  2YYI A;  3B96 A;  2JBR A;  4NXL A;  4O5M A;  3LGQ A;  1QDB A;  3TOR A;  2IX5 A;  4ZYJ A;  1FS7 A;  1EGE A;  4WJY A;  2R0M A;  3AFE A;  2YYM A;  4L3X A;  2JBT A;  2RDZ A;  3OIB A;  4P13 A;  1IS2 A;  3OWA A;  3MPI A;  1OAH A;  4Q4U A;  1UDY A;  3SCE A;  2D29 A;  2FON A;  3GQT A;  1SIQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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