2JBTA

Structure of the monooxygenase component of p-hydroxyphenylacetate hydroxylase from acinetobacter baumannii
Total Genus 139
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
400
structure length
400
Chain Sequence
IRLVYTHAQTPDVSGVSMLEKIQQILPQIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLCTHSHQIAMFSKQLQDEIWLKDPDATASSSIAPFGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYSFGVIPRSDYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDPTMV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords P-HYDROXYPHENYLACETATE HYDROXYLASE C2\:OXYGENASE COMPONENT
publication title Structure of the Monooxygenase Component of a Two-Component Flavoprotein Monooxygenase.
pubmed doi rcsb
source organism Acinetobacter baumannii
total genus 139
structure length 400
sequence length 400
chains with identical sequence B, C, D
ec nomenclature ec 1.14.14.9: 4-hydroxyphenylacetate 3-monooxygenase.
pdb deposition date 2006-12-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
A PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 2jbtA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 2jbtA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 2jbtA02
3TTBA 3BNJA 1UDYA 2IX6A 3NF4A 4KCFA 4Q1OA 3GNCA 4RM7A 3D6BA 1OAHA 5K3JA 2OT4A 4G5EA 4NXLA 3EONA 2E81A 4N5FA 3LGQA 4KTOA 2OR0A 3BNHA 2IX5A 3TORA 3MKHA 4L3XA 1QDBA 2REHA 3RKHA 4Q0TA 2JBTA 4ZXVA 4IRNA 4Q4UA 4W9UA 3B96A 3HWCA 1GU6A 1BUCA 3SCEA 3D9FA 2CX9A 1EGCA 4Q5CA 1FS9A 2EBAA 3AFEA 3SXQA 4U83A 2YYGA 2VIGA 1SIRA 1WS9A 4IV6A 4XVXA 2C12A 4P13A 2YYMA 1IS2A 3X0XA 2YYIA 2D29A 2JIFA 1T9GA 2JBSA 2UXWA 3GQTA 1R2JA 1W07A 4ZYJA 2R0MA 4Q17A 4JEKA 3P4TA 3F29A 1EGDA 1U8VA 1EGEA 3R7KA 3MXLA 1SIQA 4Q5BA 2RFQA 2JBRA 3X0YA 4X28A 3BNGA 3M9VA 3MPJA 1IVHA 4X28C 2RF7A 4O5MA 4HR3A 3D1IA 3MDDA 4L3YA 4L1FA 3UBRA 2RDZA 3OWMA 2Z1QA 2PG0A 5K3HA 3AFFA 3FO3A 3UU9A 2VR0A 5K3IA 4WJYA 3LG1A 2C0UA 3OWAA 1JQIA 3D9DA 3GM6A 2E80A 1FS7A 3D9GA 3PFDA 1UKWA 3MDEA 4M9AA 2A1TA 2DDHA 2FONA 3FCJA 3OIBA 3SF6A 4DOYA 2J7AA 3MPIA 2YYJA 4OO2A 3BNFA 2ZAFA 3L1TA 1RX0A 4L3ZA 3II9A 3SWOA 4L38A 2WBIA 3MMOA 2DVLA 5K3GA 3EOMA 3S7WA 3D9EA 2ZO5A 2R0NA 2YYKA 1FS8A 2YYLA
chains in the Genus database with same CATH superfamily
3TTBA 4FZ4A 4JIZA 2CJ6A 4FF1A 4AI6A 3BNJA 4HKRA 1SK6A 3D2RA 1UDYA 4MPNA 2IX6A 3NF4A 4KCFA 4Q1OA 3Q22A 5EZ3A 5M4KA 3GNCA 4RM7A 2E0AA 2QR4A 3D6BA 4FF3A 1OAHA 2R03A 5K3JA 2OT4A 4G5EA 4QICA 1K90A 4NXLA 5GJVE 3EONA 2E81A 4N5FA 1Y8OA 3LGQA 4KTOA 2OR0A 2OJQA 3Q23A 3BNHA 1RJ1A 2GBBA 5B5WA 3TZ5A 2IX5A 3TORA 3MKHA 2R05A 4L3XA 1QDBA 2REHA 2FP1A 3RKHA 4E01A 4Q0TA 2JBTA 4ZXVA 4IRNA 2BU8A 4Q4UA 5J6AA 1XFZA 2FP2A 4W9UA 3DJLA 4V25A 3B96A 2XS1A 3HWCA 1S26A 4MP2A 1GU6A 4FF4A 4KSAA 1BUCA 3SCEA 3D9FA 2CX9A 1EGCA 2CJ5A 2EBHX 4Q5CA 3Q24A 2HJNA 1FS9A 1GKZA 2EBAA 1XG2B 3AFEA 3SXQA 2CJ7A 4U83A 2YYGA 2VIGA 1SIRA 2XQRB 4LQSB 1WS9A 4IV6A 4XVXA 4MPEA 2C12A 4P13A 1JM6A 5BRMA 2Q8GA 2YYMA 1XFVA 1IS2A 3X0XA 4KS9A 2YYIA 2D29A 3X29A 2XS8A 2JIFA 1Y8PA 2BU5A 1T9GA 2JBSA 3CE2A 2UXWA 2CJ8A 2LFWA 2ZDYA 3GQTA 1R2JA 1W07A 4AKHA 4E00A 3U33A 4ZYJA 4LQQB 4MPCA 2R0MA 4AKGA 4Q17A 2BU6A 2BTZA 4DZYA 4JEKA 3P4TA 2AO2A 3F29A 1EGDA 1U8VA 1EGEA 3R7KA 3MXLA 1X90A 1SIQA 2F6LA 4P79A 4Q5BA 2VF1A 3TZ0A 1XFUA 5BRKA 5M4NA 3VADA 3VKHA 2RFQA 1X91A 5GJWE 2JBRA 3X0YA 4X28A 3BNGA 3CRLA 3M9VA 3MPJA 1IVHA 4X28C 2CJ4A 5M4PA 2RF7A 4O5MA 4HKSA 2ZKJA 4HR3A 1SC5A 3D1IA 3MDDA 2Q8IA 3VKGA 1R3BA 4L3YA 4E02A 2PO4A 4L1FA 3UBRA 2RDZA 3OWMA 1XFYA 2Z1QA 2YGWA 2PG0A 1LVCA 3TZ4A 5K3HA 4G97A 3AFFA 3FO3A 3UU9A 2VR0A 5K3IA 1PI1A 1Y8NA 4WJYA 3LG1A 5B6BA 3CRKA 4FF2A 2OEVA 3TZ2A 2C0UA 3OWAA 1JQIA 1Y0VA 3D9DA 2BU2A 3GM6A 4J1VA 2E80A 3KMLA 4JIOA 2PNRA 1XFWA 1K93A 1FS7A 2BU7A 2Q8HA 5J71A 3D9GA 3PFDA 1UKWA 3MDEA 4M9AA 4V26A 2A1TA 2DDHA 2FONA 3FCJA 3OIBA 2Q8FA 1GJVA 3SF6A 4DOYA 1GKXA 1K8TA 4F0XA 3Q0AA 2J7AA 3C3LA 5M4MA 2AZEA 3N0RA 3C46A 3MPIA 2EBFX 2YYJA 4OO2A 1X8ZA 3BNFA 4H85A 2ZAFA 4H7QA 4AKIA 3L1TA 5B5VA 1RX0A 4L3ZA 1XFXA 1RJ4A 1RP3A 3II9A 3SWOA 4L38A 4MP7A 2WBIA 3MMOA 3C2PA 2DVLA 4H81A 5K3GA 4KSFA 3EOMA 2R02A 3S7WA 3D9EA 2OEXA 2R0NA 2EC5A 2YYKA 2ZDXA 1FS8A 2ZO5A 2YYLA 1PK0A
chains in the Genus database with same CATH topology
3TTBA 3BNJA 1UDYA 2IX6A 3NF4A 4KCFA 4Q1OA 3GNCA 4RM7A 3D6BA 1OAHA 5K3JA 2OT4A 4G5EA 4NXLA 3EONA 2E81A 4N5FA 3LGQA 4KTOA 2OR0A 3BNHA 2IX5A 3TORA 3MKHA 4L3XA 1QDBA 2REHA 3RKHA 4Q0TA 2JBTA 4ZXVA 4IRNA 4Q4UA 4W9UA 3B96A 3HWCA 1GU6A 1BUCA 3SCEA 3D9FA 2CX9A 1EGCA 4Q5CA 1FS9A 2EBAA 3AFEA 3SXQA 4U83A 2YYGA 2VIGA 1SIRA 1WS9A 4IV6A 4XVXA 2C12A 4P13A 2YYMA 1IS2A 3X0XA 2YYIA 2D29A 2JIFA 1T9GA 2JBSA 2UXWA 3GQTA 1R2JA 1W07A 4ZYJA 2R0MA 4Q17A 4JEKA 3P4TA 3F29A 1EGDA 1U8VA 1EGEA 3R7KA 3MXLA 1SIQA 4Q5BA 2RFQA 2JBRA 3X0YA 4X28A 3BNGA 3M9VA 3MPJA 1IVHA 4X28C 2RF7A 4O5MA 4HR3A 3D1IA 3MDDA 4L3YA 4L1FA 3UBRA 2RDZA 3OWMA 2Z1QA 2PG0A 5K3HA 3AFFA 3FO3A 3UU9A 2VR0A 5K3IA 4WJYA 3LG1A 2C0UA 3OWAA 1JQIA 3D9DA 3GM6A 2E80A 1FS7A 3D9GA 3PFDA 1UKWA 3MDEA 4M9AA 2A1TA 2DDHA 2FONA 3FCJA 3OIBA 3SF6A 4DOYA 2J7AA 3MPIA 2YYJA 4OO2A 3BNFA 2ZAFA 3L1TA 1RX0A 4L3ZA 3II9A 3SWOA 4L38A 2WBIA 3MMOA 2DVLA 5K3GA 3EOMA 3S7WA 3D9EA 2ZO5A 2R0NA 2YYKA 1FS8A 2YYLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TTB A;  3BNJ A;  1UDY A;  2IX6 A;  3NF4 A;  4KCF A;  4Q1O A;  3GNC A;  4RM7 A;  3D6B A;  1OAH A;  5K3J A;  2OT4 A;  4G5E A;  4NXL A;  3EON A;  2E81 A;  4N5F A;  3LGQ A;  4KTO A;  2OR0 A;  3BNH A;  2IX5 A;  3TOR A;  3MKH A;  4L3X A;  1QDB A;  2REH A;  3RKH A;  4Q0T A;  2JBT A;  4ZXV A;  4IRN A;  4Q4U A;  4W9U A;  3B96 A;  3HWC A;  1GU6 A;  1BUC A;  3SCE A;  3D9F A;  2CX9 A;  1EGC A;  4Q5C A;  1FS9 A;  2EBA A;  3AFE A;  3SXQ A;  4U83 A;  2YYG A;  2VIG A;  1SIR A;  1WS9 A;  4IV6 A;  4XVX A;  2C12 A;  4P13 A;  2YYM A;  1IS2 A;  3X0X A;  2YYI A;  2D29 A;  2JIF A;  1T9G A;  2JBS A;  2UXW A;  3GQT A;  1R2J A;  1W07 A;  4ZYJ A;  2R0M A;  4Q17 A;  4JEK A;  3P4T A;  3F29 A;  1EGD A;  1U8V A;  1EGE A;  3R7K A;  3MXL A;  1SIQ A;  4Q5B A;  2RFQ A;  2JBR A;  3X0Y A;  4X28 A;  3BNG A;  3M9V A;  3MPJ A;  1IVH A;  4X28 C;  2RF7 A;  4O5M A;  4HR3 A;  3D1I A;  3MDD A;  4L3Y A;  4L1F A;  3UBR A;  2RDZ A;  3OWM A;  2Z1Q A;  2PG0 A;  5K3H A;  3AFF A;  3FO3 A;  3UU9 A;  2VR0 A;  5K3I A;  4WJY A;  3LG1 A;  2C0U A;  3OWA A;  1JQI A;  3D9D A;  3GM6 A;  2E80 A;  1FS7 A;  3D9G A;  3PFD A;  1UKW A;  3MDE A;  4M9A A;  2A1T A;  2DDH A;  2FON A;  3FCJ A;  3OIB A;  3SF6 A;  4DOY A;  2J7A A;  3MPI A;  2YYJ A;  4OO2 A;  3BNF A;  2ZAF A;  3L1T A;  1RX0 A;  4L3Z A;  3II9 A;  3SWO A;  4L38 A;  2WBI A;  3MMO A;  2DVL A;  5K3G A;  3EOM A;  3S7W A;  3D9E A;  2ZO5 A;  2R0N A;  2YYK A;  1FS8 A;  2YYL A; 
#chains in the Genus database with same CATH topology
 3TTB A;  4FZ4 A;  4JIZ A;  2CJ6 A;  4FF1 A;  4AI6 A;  3BNJ A;  4HKR A;  1SK6 A;  3D2R A;  1UDY A;  4MPN A;  2IX6 A;  3NF4 A;  4KCF A;  4Q1O A;  3Q22 A;  5EZ3 A;  5M4K A;  3GNC A;  4RM7 A;  2E0A A;  2QR4 A;  3D6B A;  4FF3 A;  1OAH A;  2R03 A;  5K3J A;  2OT4 A;  4G5E A;  4QIC A;  1K90 A;  4NXL A;  5GJV E;  3EON A;  2E81 A;  4N5F A;  1Y8O A;  3LGQ A;  4KTO A;  2OR0 A;  2OJQ A;  3Q23 A;  3BNH A;  1RJ1 A;  2GBB A;  5B5W A;  3TZ5 A;  2IX5 A;  3TOR A;  3MKH A;  2R05 A;  4L3X A;  1QDB A;  2REH A;  2FP1 A;  3RKH A;  4E01 A;  4Q0T A;  2JBT A;  4ZXV A;  4IRN A;  2BU8 A;  4Q4U A;  5J6A A;  1XFZ A;  2FP2 A;  4W9U A;  3DJL A;  4V25 A;  3B96 A;  2XS1 A;  3HWC A;  1S26 A;  4MP2 A;  1GU6 A;  4FF4 A;  4KSA A;  1BUC A;  3SCE A;  3D9F A;  2CX9 A;  1EGC A;  2CJ5 A;  2EBH X;  4Q5C A;  3Q24 A;  2HJN A;  1FS9 A;  1GKZ A;  2EBA A;  1XG2 B;  3AFE A;  3SXQ A;  2CJ7 A;  4U83 A;  2YYG A;  2VIG A;  1SIR A;  2XQR B;  4LQS B;  1WS9 A;  4IV6 A;  4XVX A;  4MPE A;  2C12 A;  4P13 A;  1JM6 A;  5BRM A;  2Q8G A;  2YYM A;  1XFV A;  1IS2 A;  3X0X A;  4KS9 A;  2YYI A;  2D29 A;  3X29 A;  2XS8 A;  2JIF A;  1Y8P A;  2BU5 A;  1T9G A;  2JBS A;  3CE2 A;  2UXW A;  2CJ8 A;  2LFW A;  2ZDY A;  3GQT A;  1R2J A;  1W07 A;  4AKH A;  4E00 A;  3U33 A;  4ZYJ A;  4LQQ B;  4MPC A;  2R0M A;  4AKG A;  4Q17 A;  2BU6 A;  2BTZ A;  4DZY A;  4JEK A;  3P4T A;  2AO2 A;  3F29 A;  1EGD A;  1U8V A;  1EGE A;  3R7K A;  3MXL A;  1X90 A;  1SIQ A;  2F6L A;  4P79 A;  4Q5B A;  2VF1 A;  3TZ0 A;  1XFU A;  5BRK A;  5M4N A;  3VAD A;  3VKH A;  2RFQ A;  1X91 A;  5GJW E;  2JBR A;  3X0Y A;  4X28 A;  3BNG A;  3CRL A;  3M9V A;  3MPJ A;  1IVH A;  4X28 C;  2CJ4 A;  5M4P A;  2RF7 A;  4O5M A;  4HKS A;  2ZKJ A;  4HR3 A;  1SC5 A;  3D1I A;  3MDD A;  2Q8I A;  3VKG A;  1R3B A;  4L3Y A;  4E02 A;  2PO4 A;  4L1F A;  3UBR A;  2RDZ A;  3OWM A;  1XFY A;  2Z1Q A;  2YGW A;  2PG0 A;  1LVC A;  3TZ4 A;  5K3H A;  4G97 A;  3AFF A;  3FO3 A;  3UU9 A;  2VR0 A;  5K3I A;  1PI1 A;  1Y8N A;  4WJY A;  3LG1 A;  5B6B A;  3CRK A;  4FF2 A;  2OEV A;  3TZ2 A;  2C0U A;  3OWA A;  1JQI A;  1Y0V A;  3D9D A;  2BU2 A;  3GM6 A;  4J1V A;  2E80 A;  3KML A;  4JIO A;  2PNR A;  1XFW A;  1K93 A;  1FS7 A;  2BU7 A;  2Q8H A;  5J71 A;  3D9G A;  3PFD A;  1UKW A;  3MDE A;  4M9A A;  4V26 A;  2A1T A;  2DDH A;  2FON A;  3FCJ A;  3OIB A;  2Q8F A;  1GJV A;  3SF6 A;  4DOY A;  1GKX A;  1K8T A;  4F0X A;  3Q0A A;  2J7A A;  3C3L A;  5M4M A;  2AZE A;  3N0R A;  3C46 A;  3MPI A;  2EBF X;  2YYJ A;  4OO2 A;  1X8Z A;  3BNF A;  4H85 A;  2ZAF A;  4H7Q A;  4AKI A;  3L1T A;  5B5V A;  1RX0 A;  4L3Z A;  1XFX A;  1RJ4 A;  1RP3 A;  3II9 A;  3SWO A;  4L38 A;  4MP7 A;  2WBI A;  3MMO A;  3C2P A;  2DVL A;  4H81 A;  5K3G A;  4KSF A;  3EOM A;  2R02 A;  3S7W A;  3D9E A;  2OEX A;  2R0N A;  2EC5 A;  2YYK A;  2ZDX A;  1FS8 A;  2ZO5 A;  2YYL A;  1PK0 A; 
#chains in the Genus database with same CATH homology
 3TTB A;  3BNJ A;  1UDY A;  2IX6 A;  3NF4 A;  4KCF A;  4Q1O A;  3GNC A;  4RM7 A;  3D6B A;  1OAH A;  5K3J A;  2OT4 A;  4G5E A;  4NXL A;  3EON A;  2E81 A;  4N5F A;  3LGQ A;  4KTO A;  2OR0 A;  3BNH A;  2IX5 A;  3TOR A;  3MKH A;  4L3X A;  1QDB A;  2REH A;  3RKH A;  4Q0T A;  2JBT A;  4ZXV A;  4IRN A;  4Q4U A;  4W9U A;  3B96 A;  3HWC A;  1GU6 A;  1BUC A;  3SCE A;  3D9F A;  2CX9 A;  1EGC A;  4Q5C A;  1FS9 A;  2EBA A;  3AFE A;  3SXQ A;  4U83 A;  2YYG A;  2VIG A;  1SIR A;  1WS9 A;  4IV6 A;  4XVX A;  2C12 A;  4P13 A;  2YYM A;  1IS2 A;  3X0X A;  2YYI A;  2D29 A;  2JIF A;  1T9G A;  2JBS A;  2UXW A;  3GQT A;  1R2J A;  1W07 A;  4ZYJ A;  2R0M A;  4Q17 A;  4JEK A;  3P4T A;  3F29 A;  1EGD A;  1U8V A;  1EGE A;  3R7K A;  3MXL A;  1SIQ A;  4Q5B A;  2RFQ A;  2JBR A;  3X0Y A;  4X28 A;  3BNG A;  3M9V A;  3MPJ A;  1IVH A;  4X28 C;  2RF7 A;  4O5M A;  4HR3 A;  3D1I A;  3MDD A;  4L3Y A;  4L1F A;  3UBR A;  2RDZ A;  3OWM A;  2Z1Q A;  2PG0 A;  5K3H A;  3AFF A;  3FO3 A;  3UU9 A;  2VR0 A;  5K3I A;  4WJY A;  3LG1 A;  2C0U A;  3OWA A;  1JQI A;  3D9D A;  3GM6 A;  2E80 A;  1FS7 A;  3D9G A;  3PFD A;  1UKW A;  3MDE A;  4M9A A;  2A1T A;  2DDH A;  2FON A;  3FCJ A;  3OIB A;  3SF6 A;  4DOY A;  2J7A A;  3MPI A;  2YYJ A;  4OO2 A;  3BNF A;  2ZAF A;  3L1T A;  1RX0 A;  4L3Z A;  3II9 A;  3SWO A;  4L38 A;  2WBI A;  3MMO A;  2DVL A;  5K3G A;  3EOM A;  3S7W A;  3D9E A;  2ZO5 A;  2R0N A;  2YYK A;  1FS8 A;  2YYL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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