2CJ6A

Crystal structure of a cell wall invertase inhibitor from tobacco (ph 7.5)
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
146
structure length
146
Chain Sequence
NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Inhibitor
molecule keywords INVERTASE INHIBITOR
publication title Multiple Crystal Forms of the Cell-Wall Invertase Inhibitor from Tobacco Support High Conformational Rigidity Over a Broad Ph-Range
pubmed doi rcsb
source organism Nicotiana tabacum
total genus 61
structure length 146
sequence length 146
ec nomenclature
pdb deposition date 2006-03-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04043 PMEI Plant invertase/pectin methylesterase inhibitor
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.40 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Invertase/pectin methylesterase inhibitor family protein 2cj6A00
1X91A 1XG2B 2XQRB 1X90A 1X8ZA 2CJ4A 2CJ8A 2CJ7A 1RJ1A 2CJ5A 2CJ6A 1RJ4A
chains in the Genus database with same CATH superfamily
2QR4A 5J71A 4E01A 5M4MA 2R02A 2E80A 4DZYA 1EGDA 2IX6A 4L1FA 2OT4A 4H7QA 2EBAA 2R03A 1PK0A 1EGCA 2F6LA 3N0RA 4Q1OA 5B6BA 1XFWA 5BRKA 1X90A 3AFEA 4L3YA 2PO4A 1Y8PA 4Q4UA 2EBFX 2YYIA 4H81A 2FP1A 2AZEA 1SK6A 3BNHA 3GNCA 4W9UA 3VKHA 3VADA 4LQQB 3Q0AA 1K90A 3D9DA 2YYMA 3KMLA 3MMOA 4FF1A 4FF2A 2WBIA 2DVLA 2C0UA 2JIFA 5K3HA 1JQIA 3D2RA 3MPJA 1Y8OA 1XG2B 4Q0TA 1X8ZA 1FS7A 3BNJA 5K3JA 3C2PA 3FO3A 2CJ5A 4QICA 2JBRA 3SXQA 1FS8A 1OAHA 1W07A 2E0AA 4O5MA 1EGEA 3OWMA 2ZDYA 2DDHA 4XVXA 4G5EA 4P13A 4V26A 3L1TA 4Q17A 4AI6A 2PG0A 2BU5A 2VR0A 3TORA 4L38A 3AFFA 3MPIA 4F0XA 4ZYJA 3SWOA 2CX9A 3LGQA 3X0YA 2YYJA 4X28A 2HJNA 5GJVE 2D29A 4MPEA 2ZAFA 1XFZA 4IRNA 2VIGA 2JBSA 3GM6A 4KS9A 3TZ0A 3BNGA 3HWCA 2YYGA 5M4PA 2BU7A 1R3BA 2YYLA 3MDDA 4HR3A 4JIOA 4E00A 4KCFA 4KTOA 2BU8A 4P79A 5B5WA 4JEKA 3OWAA 3UU9A 4J1VA 1XFVA 3C3LA 2CJ8A 4MPCA 4KSAA 5K3GA 2BU6A 4JIZA 3Q23A 2C12A 3B96A 3MKHA 4MP7A 4FF3A 4E02A 3C46A 4L3ZA 2CJ4A 4ZXVA 1GKZA 1QDBA 3F29A 4NXLA 2VF1A 3CRLA 3TTBA 3UBRA 1U8VA 2R05A 3D9GA 1UKWA 1IVHA 2EC5A 4L3XA 3MXLA 4WJYA 4X28C 5J6AA 2LFWA 3TZ4A 1X91A 1UDYA 3M9VA 2Q8FA 1RP3A 1R2JA 4AKIA 2ZO5A 1GKXA 1RJ1A 1XFUA 3EOMA 3Q24A 2J7AA 2R0MA 1SC5A 3R7KA 1PI1A 3SCEA 1RJ4A 3II9A 3LG1A 4MPNA 1T9GA 2Q8IA 1S26A 2FP2A 2XQRB 4OO2A 3D6BA 1XFYA 4HKRA 3CRKA 1GU6A 2OR0A 2Q8GA 5K3IA 2XS1A 3X29A 3D9EA 3D9FA 4HKSA 1K8TA 1SIRA 3P4TA 5BRMA 2ZDXA 4Q5CA 2EBHX 1IS2A 3EONA 4G97A 4AKHA 2FONA 3MDEA 4IV6A 4KSFA 4U83A 4H85A 1FS9A 2AO2A 2RDZA 2OEXA 3CE2A 3BNFA 2E81A 3TZ5A 2CJ6A 3GQTA 2OJQA 1XFXA 1LVCA 2REHA 2YYKA 5M4NA 3RKHA 2Z1QA 3TZ2A 1BUCA 4FZ4A 1GJVA 2RF7A 1Y0VA 2PNRA 3X0XA 3PFDA 2BU2A 4Q5BA 3Q22A 3S7WA 3NF4A 4DOYA 3D1IA 2ZKJA 1K93A 1SIQA 2CJ7A 2XS8A 2JBTA 1JM6A 1WS9A 3OIBA 4RM7A 1Y8NA 2RFQA 3FCJA 5M4KA 3VKGA 4AKGA 2GBBA 4LQSB 5GJWE 4V25A 2A1TA 4N5FA 2BTZA 2R0NA 4FF4A 2UXWA 1RX0A 2YGWA 4M9AA 2Q8HA 4MP2A 5B5VA 2OEVA 2IX5A 3SF6A
chains in the Genus database with same CATH topology
1X91A 1XG2B 2XQRB 1X90A 1X8ZA 2CJ4A 2CJ8A 2CJ7A 1RJ1A 2CJ5A 2CJ6A 1RJ4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X91 A;  1XG2 B;  2XQR B;  1X90 A;  1X8Z A;  2CJ4 A;  2CJ8 A;  2CJ7 A;  1RJ1 A;  2CJ5 A;  2CJ6 A;  1RJ4 A; 
#chains in the Genus database with same CATH topology
 2QR4 A;  5J71 A;  4E01 A;  5M4M A;  2R02 A;  2E80 A;  4DZY A;  1EGD A;  2IX6 A;  4L1F A;  2OT4 A;  4H7Q A;  2EBA A;  2R03 A;  1PK0 A;  1EGC A;  2F6L A;  3N0R A;  4Q1O A;  5B6B A;  1XFW A;  5BRK A;  1X90 A;  3AFE A;  4L3Y A;  2PO4 A;  1Y8P A;  4Q4U A;  2EBF X;  2YYI A;  4H81 A;  2FP1 A;  2AZE A;  1SK6 A;  3BNH A;  3GNC A;  4W9U A;  3VKH A;  3VAD A;  4LQQ B;  3Q0A A;  1K90 A;  3D9D A;  2YYM A;  3KML A;  3MMO A;  4FF1 A;  4FF2 A;  2WBI A;  2DVL A;  2C0U A;  2JIF A;  5K3H A;  1JQI A;  3D2R A;  3MPJ A;  1Y8O A;  1XG2 B;  4Q0T A;  1X8Z A;  1FS7 A;  3BNJ A;  5K3J A;  3C2P A;  3FO3 A;  2CJ5 A;  4QIC A;  2JBR A;  3SXQ A;  1FS8 A;  1OAH A;  1W07 A;  2E0A A;  4O5M A;  1EGE A;  3OWM A;  2ZDY A;  2DDH A;  4XVX A;  4G5E A;  4P13 A;  4V26 A;  3L1T A;  4Q17 A;  4AI6 A;  2PG0 A;  2BU5 A;  2VR0 A;  3TOR A;  4L38 A;  3AFF A;  3MPI A;  4F0X A;  4ZYJ A;  3SWO A;  2CX9 A;  3LGQ A;  3X0Y A;  2YYJ A;  4X28 A;  2HJN A;  5GJV E;  2D29 A;  4MPE A;  2ZAF A;  1XFZ A;  4IRN A;  2VIG A;  2JBS A;  3GM6 A;  4KS9 A;  3TZ0 A;  3BNG A;  3HWC A;  2YYG A;  5M4P A;  2BU7 A;  1R3B A;  2YYL A;  3MDD A;  4HR3 A;  4JIO A;  4E00 A;  4KCF A;  4KTO A;  2BU8 A;  4P79 A;  5B5W A;  4JEK A;  3OWA A;  3UU9 A;  4J1V A;  1XFV A;  3C3L A;  2CJ8 A;  4MPC A;  4KSA A;  5K3G A;  2BU6 A;  4JIZ A;  3Q23 A;  2C12 A;  3B96 A;  3MKH A;  4MP7 A;  4FF3 A;  4E02 A;  3C46 A;  4L3Z A;  2CJ4 A;  4ZXV A;  1GKZ A;  1QDB A;  3F29 A;  4NXL A;  2VF1 A;  3CRL A;  3TTB A;  3UBR A;  1U8V A;  2R05 A;  3D9G A;  1UKW A;  1IVH A;  2EC5 A;  4L3X A;  3MXL A;  4WJY A;  4X28 C;  5J6A A;  2LFW A;  3TZ4 A;  1X91 A;  1UDY A;  3M9V A;  2Q8F A;  1RP3 A;  1R2J A;  4AKI A;  2ZO5 A;  1GKX A;  1RJ1 A;  1XFU A;  3EOM A;  3Q24 A;  2J7A A;  2R0M A;  1SC5 A;  3R7K A;  1PI1 A;  3SCE A;  1RJ4 A;  3II9 A;  3LG1 A;  4MPN A;  1T9G A;  2Q8I A;  1S26 A;  2FP2 A;  2XQR B;  4OO2 A;  3D6B A;  1XFY A;  4HKR A;  3CRK A;  1GU6 A;  2OR0 A;  2Q8G A;  5K3I A;  2XS1 A;  3X29 A;  3D9E A;  3D9F A;  4HKS A;  1K8T A;  1SIR A;  3P4T A;  5BRM A;  2ZDX A;  4Q5C A;  2EBH X;  1IS2 A;  3EON A;  4G97 A;  4AKH A;  2FON A;  3MDE A;  4IV6 A;  4KSF A;  4U83 A;  4H85 A;  1FS9 A;  2AO2 A;  2RDZ A;  2OEX A;  3CE2 A;  3BNF A;  2E81 A;  3TZ5 A;  2CJ6 A;  3GQT A;  2OJQ A;  1XFX A;  1LVC A;  2REH A;  2YYK A;  5M4N A;  3RKH A;  2Z1Q A;  3TZ2 A;  1BUC A;  4FZ4 A;  1GJV A;  2RF7 A;  1Y0V A;  2PNR A;  3X0X A;  3PFD A;  2BU2 A;  4Q5B A;  3Q22 A;  3S7W A;  3NF4 A;  4DOY A;  3D1I A;  2ZKJ A;  1K93 A;  1SIQ A;  2CJ7 A;  2XS8 A;  2JBT A;  1JM6 A;  1WS9 A;  3OIB A;  4RM7 A;  1Y8N A;  2RFQ A;  3FCJ A;  5M4K A;  3VKG A;  4AKG A;  2GBB A;  4LQS B;  5GJW E;  4V25 A;  2A1T A;  4N5F A;  2BTZ A;  2R0N A;  4FF4 A;  2UXW A;  1RX0 A;  2YGW A;  4M9A A;  2Q8H A;  4MP2 A;  5B5V A;  2OEV A;  2IX5 A;  3SF6 A; 
#chains in the Genus database with same CATH homology
 1X91 A;  1XG2 B;  2XQR B;  1X90 A;  1X8Z A;  2CJ4 A;  2CJ8 A;  2CJ7 A;  1RJ1 A;  2CJ5 A;  2CJ6 A;  1RJ4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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