4X28A

Crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis
Total Genus 129
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
129
sequence length
399
structure length
386
Chain Sequence
MRISYTPQQEELRRELRSYFATLMTPERREALSSVNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFTDEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMWTSLIQYADYVWLAVRTNPESSGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLVTNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLKLINWELASSQGPSPADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRAN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
source organism Mycobacterium tuberculosis (strain atcc 25618 / h37rv)
publication title Unraveling Cholesterol Catabolism in Mycobacterium tuberculosis: ChsE4-ChsE5 alpha 2 beta 2 Acyl-CoA Dehydrogenase Initiates beta-Oxidation of 3-Oxo-cholest-4-en-26-oyl CoA.
pubmed doi rcsb
molecule keywords Acyl-CoA dehydrogenase
total genus 129
structure length 386
sequence length 399
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-11-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 4x28A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 4x28A03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 4x28A02
2R0MA 3OWAA 2DVLA 3OWMA 1IVHA 3D9FA 2CX9A 4Q5BA 1WS9A 4W9UA 3F29A 1SIRA 3MXLA 1FS8A 4JEKA 1OAHA 3D1IA 2DDHA 3B96A 1EGEA 3PFDA 2YYKA 3II9A 4ZXVA 4RM7A 2OR0A 4ZYJA 4L1FA 3AFEA 2UXWA 2C0UA 3MPJA 2Z1QA 2OT4A 1GU6A 3BNFA 5K3HA 2A1TA 3P4TA 2D29A 3AFFA 2YYJA 3EOMA 4OO2A 4L3ZA 2RFQA 3MPIA 2PG0A 4G5EA 4X28A 4IRNA 3MDDA 4L3XA 2JBTA 4HR3A 3GQTA 3UBRA 3RKHA 1RX0A 2ZAFA 3SXQA 2YYLA 4L3YA 1FS7A 5K3JA 4WJYA 3D9DA 2RDZA 2IX5A 4Q4UA 3S7WA 3UU9A 3LGQA 3BNHA 3TTBA 1T9GA 3OIBA 4NXLA 3HWCA 3L1TA 5K3IA 1U8VA 2REHA 2VIGA 1FS9A 2R0NA 3D9EA 4O5MA 3BNJA 2C12A 3FCJA 5K3GA 4M9AA 1IS2A 3MMOA 4Q5CA 3BNGA 2JBSA 1W07A 1UDYA 4IV6A 2RF7A 1SIQA 3LG1A 1EGDA 4U83A 3X0YA 4P13A 1BUCA 3X0XA 3MKHA 1QDBA 2E80A 3SWOA 4X28C 2FONA 4Q17A 2IX6A 1JQIA 4DOYA 4N5FA 3M9VA 4Q0TA 4KCFA 4XVXA 2YYMA 3D6BA 3SF6A 4KTOA 3NF4A 2JBRA 3D9GA 3R7KA 3FO3A 2E81A 2J7AA 3GM6A 2EBAA 3TORA 2JIFA 4Q1OA 1UKWA 3SCEA 1EGCA 3GNCA 2WBIA 3EONA 4L38A 2YYIA 2VR0A 2YYGA 1R2JA 2ZO5A 3MDEA
chains in the Genus database with same CATH superfamily
2R0MA 1K93A 4HKSA 3OWAA 1S26A 2DVLA 4MP2A 3OWMA 1IVHA 3D9FA 2CX9A 2OJQA 2PO4A 2XS8A 2EC5A 2Q8FA 2CJ5A 4Q5BA 1WS9A 1GKZA 3CRKA 4W9UA 3X29A 3F29A 1Y8OA 3C46A 1Y0VA 1SIRA 3MXLA 4J1VA 5J71A 3C3LA 1X8ZA 3TZ0A 1FS8A 3VKHA 4JEKA 2BU8A 1OAHA 2ZDYA 3D1IA 2DDHA 3B96A 2BTZA 1EGEA 4H7QA 5GJWE 4JIZA 1XFVA 3PFDA 2VF1A 2YYKA 4MPCA 3II9A 3Q0AA 4LQSB 3TZ5A 4FF4A 4G97A 4ZXVA 4V26A 4HKRA 5J6AA 4RM7A 2OR0A 4ZYJA 1K8TA 4L1FA 4KSFA 3AFEA 2UXWA 1R3BA 2C0UA 4MPEA 5B6BA 3CE2A 3MPJA 5B5VA 2Z1QA 2OT4A 4F0XA 1GU6A 1XFYA 5M4PA 4AI6A 1JM6A 2LFWA 3BNFA 4V25A 5K3HA 2GBBA 4AKHA 2A1TA 3VADA 3P4TA 2D29A 3VKGA 5BRKA 2Q8IA 3AFFA 2EBHX 1XG2B 2YYJA 3EOMA 4OO2A 2CJ7A 4L3ZA 2RFQA 3TZ2A 4FZ4A 3Q22A 2BU7A 2ZDXA 3MPIA 2PG0A 2CJ6A 4AKIA 4G5EA 4X28A 4IRNA 3MDDA 2HJNA 4L3XA 4E00A 5M4MA 2JBTA 4HR3A 3N0RA 2BU5A 1PI1A 2AO2A 1XFWA 2E0AA 4MP7A 3GQTA 1XFUA 2QR4A 3RKHA 5GJVE 1RX0A 2ZAFA 3UBRA 3SXQA 2YYLA 3CRLA 5M4KA 4L3YA 1FS7A 5K3JA 2ZKJA 4KSAA 4WJYA 2CJ4A 3D9DA 2RDZA 2IX5A 4Q4UA 2R05A 3S7WA 3DJLA 4H85A 1SK6A 2F6LA 3D2RA 3UU9A 3LGQA 4H81A 3TZ4A 4E01A 5B5WA 3Q24A 3BNHA 3TTBA 1T9GA 3OIBA 4NXLA 3HWCA 1GJVA 3L1TA 4FF2A 5K3IA 2OEVA 1U8VA 2AZEA 2REHA 3U33A 2EBFX 2VIGA 1FS9A 4FF3A 1LVCA 2OEXA 1RP3A 2R0NA 3D9EA 1K90A 4O5MA 3BNJA 2C12A 3Q23A 1SC5A 4KS9A 4QICA 3FCJA 5K3GA 1Y8NA 4M9AA 1IS2A 3MMOA 4Q5CA 3BNGA 2JBSA 1W07A 1UDYA 4IV6A 1Y8PA 1SIQA 2RF7A 2XQRB 2BU2A 3LG1A 4AKGA 2Q8GA 1EGDA 4U83A 3X0YA 1X90A 1RJ1A 4DZYA 4P13A 2R02A 1BUCA 3X0XA 3MKHA 1QDBA 2E80A 2FP2A 2BU6A 5BRMA 5M4NA 1PK0A 3SWOA 4X28C 1X91A 2FONA 4Q17A 2IX6A 1JQIA 4DOYA 4N5FA 3M9VA 4Q0TA 4KCFA 4XVXA 3C2PA 2YYMA 3D6BA 3SF6A 4KTOA 4FF1A 3NF4A 1RJ4A 2JBRA 3D9GA 3R7KA 2PNRA 3FO3A 4JIOA 2FP1A 2E81A 4LQQB 2J7AA 3GM6A 3KMLA 2EBAA 2YGWA 2Q8HA 2JIFA 2XS1A 4Q1OA 3TORA 1UKWA 1XFZA 2R03A 1EGCA 3GNCA 2WBIA 3EONA 4L38A 3SCEA 2YYIA 4MPNA 1XFXA 2CJ8A 2VR0A 4P79A 5EZ3A 1GKXA 2YYGA 1R2JA 4E02A 2ZO5A 3MDEA
chains in the Genus database with same CATH topology
2R0MA 3OWAA 2DVLA 3OWMA 1IVHA 3D9FA 2CX9A 4Q5BA 1WS9A 4W9UA 3F29A 1SIRA 3MXLA 1FS8A 4JEKA 1OAHA 3D1IA 2DDHA 3B96A 1EGEA 3PFDA 2YYKA 3II9A 4ZXVA 4RM7A 2OR0A 4ZYJA 4L1FA 3AFEA 2UXWA 2C0UA 3MPJA 2Z1QA 2OT4A 1GU6A 3BNFA 5K3HA 2A1TA 3P4TA 2D29A 3AFFA 2YYJA 3EOMA 4OO2A 4L3ZA 2RFQA 3MPIA 2PG0A 4G5EA 4X28A 4IRNA 3MDDA 4L3XA 2JBTA 4HR3A 3GQTA 3UBRA 3RKHA 1RX0A 2ZAFA 3SXQA 2YYLA 4L3YA 1FS7A 5K3JA 4WJYA 3D9DA 2RDZA 2IX5A 4Q4UA 3S7WA 3UU9A 3LGQA 3BNHA 3TTBA 1T9GA 3OIBA 4NXLA 3HWCA 3L1TA 5K3IA 1U8VA 2REHA 2VIGA 1FS9A 2R0NA 3D9EA 4O5MA 3BNJA 2C12A 3FCJA 5K3GA 4M9AA 1IS2A 3MMOA 4Q5CA 3BNGA 2JBSA 1W07A 1UDYA 4IV6A 2RF7A 1SIQA 3LG1A 1EGDA 4U83A 3X0YA 4P13A 1BUCA 3X0XA 3MKHA 1QDBA 2E80A 3SWOA 4X28C 2FONA 4Q17A 2IX6A 1JQIA 4DOYA 4N5FA 3M9VA 4Q0TA 4KCFA 4XVXA 2YYMA 3D6BA 3SF6A 4KTOA 3NF4A 2JBRA 3D9GA 3R7KA 3FO3A 2E81A 2J7AA 3GM6A 2EBAA 3TORA 2JIFA 4Q1OA 1UKWA 3SCEA 1EGCA 3GNCA 2WBIA 3EONA 4L38A 2YYIA 2VR0A 2YYGA 1R2JA 2ZO5A 3MDEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2R0M A;  3OWA A;  2DVL A;  3OWM A;  1IVH A;  3D9F A;  2CX9 A;  4Q5B A;  1WS9 A;  4W9U A;  3F29 A;  1SIR A;  3MXL A;  1FS8 A;  4JEK A;  1OAH A;  3D1I A;  2DDH A;  3B96 A;  1EGE A;  3PFD A;  2YYK A;  3II9 A;  4ZXV A;  4RM7 A;  2OR0 A;  4ZYJ A;  4L1F A;  3AFE A;  2UXW A;  2C0U A;  3MPJ A;  2Z1Q A;  2OT4 A;  1GU6 A;  3BNF A;  5K3H A;  2A1T A;  3P4T A;  2D29 A;  3AFF A;  2YYJ A;  3EOM A;  4OO2 A;  4L3Z A;  2RFQ A;  3MPI A;  2PG0 A;  4G5E A;  4X28 A;  4IRN A;  3MDD A;  4L3X A;  2JBT A;  4HR3 A;  3GQT A;  3UBR A;  3RKH A;  1RX0 A;  2ZAF A;  3SXQ A;  2YYL A;  4L3Y A;  1FS7 A;  5K3J A;  4WJY A;  3D9D A;  2RDZ A;  2IX5 A;  4Q4U A;  3S7W A;  3UU9 A;  3LGQ A;  3BNH A;  3TTB A;  1T9G A;  3OIB A;  4NXL A;  3HWC A;  3L1T A;  5K3I A;  1U8V A;  2REH A;  2VIG A;  1FS9 A;  2R0N A;  3D9E A;  4O5M A;  3BNJ A;  2C12 A;  3FCJ A;  5K3G A;  4M9A A;  1IS2 A;  3MMO A;  4Q5C A;  3BNG A;  2JBS A;  1W07 A;  1UDY A;  4IV6 A;  2RF7 A;  1SIQ A;  3LG1 A;  1EGD A;  4U83 A;  3X0Y A;  4P13 A;  1BUC A;  3X0X A;  3MKH A;  1QDB A;  2E80 A;  3SWO A;  4X28 C;  2FON A;  4Q17 A;  2IX6 A;  1JQI A;  4DOY A;  4N5F A;  3M9V A;  4Q0T A;  4KCF A;  4XVX A;  2YYM A;  3D6B A;  3SF6 A;  4KTO A;  3NF4 A;  2JBR A;  3D9G A;  3R7K A;  3FO3 A;  2E81 A;  2J7A A;  3GM6 A;  2EBA A;  3TOR A;  2JIF A;  4Q1O A;  1UKW A;  3SCE A;  1EGC A;  3GNC A;  2WBI A;  3EON A;  4L38 A;  2YYI A;  2VR0 A;  2YYG A;  1R2J A;  2ZO5 A;  3MDE A; 
#chains in the Genus database with same CATH topology
 2R0M A;  1K93 A;  4HKS A;  3OWA A;  1S26 A;  2DVL A;  4MP2 A;  3OWM A;  1IVH A;  3D9F A;  2CX9 A;  2OJQ A;  2PO4 A;  2XS8 A;  2EC5 A;  2Q8F A;  2CJ5 A;  4Q5B A;  1WS9 A;  1GKZ A;  3CRK A;  4W9U A;  3X29 A;  3F29 A;  1Y8O A;  3C46 A;  1Y0V A;  1SIR A;  3MXL A;  4J1V A;  5J71 A;  3C3L A;  1X8Z A;  3TZ0 A;  1FS8 A;  3VKH A;  4JEK A;  2BU8 A;  1OAH A;  2ZDY A;  3D1I A;  2DDH A;  3B96 A;  2BTZ A;  1EGE A;  4H7Q A;  5GJW E;  4JIZ A;  1XFV A;  3PFD A;  2VF1 A;  2YYK A;  4MPC A;  3II9 A;  3Q0A A;  4LQS B;  3TZ5 A;  4FF4 A;  4G97 A;  4ZXV A;  4V26 A;  4HKR A;  5J6A A;  4RM7 A;  2OR0 A;  4ZYJ A;  1K8T A;  4L1F A;  4KSF A;  3AFE A;  2UXW A;  1R3B A;  2C0U A;  4MPE A;  5B6B A;  3CE2 A;  3MPJ A;  5B5V A;  2Z1Q A;  2OT4 A;  4F0X A;  1GU6 A;  1XFY A;  5M4P A;  4AI6 A;  1JM6 A;  2LFW A;  3BNF A;  4V25 A;  5K3H A;  2GBB A;  4AKH A;  2A1T A;  3VAD A;  3P4T A;  2D29 A;  3VKG A;  5BRK A;  2Q8I A;  3AFF A;  2EBH X;  1XG2 B;  2YYJ A;  3EOM A;  4OO2 A;  2CJ7 A;  4L3Z A;  2RFQ A;  3TZ2 A;  4FZ4 A;  3Q22 A;  2BU7 A;  2ZDX A;  3MPI A;  2PG0 A;  2CJ6 A;  4AKI A;  4G5E A;  4X28 A;  4IRN A;  3MDD A;  2HJN A;  4L3X A;  4E00 A;  5M4M A;  2JBT A;  4HR3 A;  3N0R A;  2BU5 A;  1PI1 A;  2AO2 A;  1XFW A;  2E0A A;  4MP7 A;  3GQT A;  1XFU A;  2QR4 A;  3RKH A;  5GJV E;  1RX0 A;  2ZAF A;  3UBR A;  3SXQ A;  2YYL A;  3CRL A;  5M4K A;  4L3Y A;  1FS7 A;  5K3J A;  2ZKJ A;  4KSA A;  4WJY A;  2CJ4 A;  3D9D A;  2RDZ A;  2IX5 A;  4Q4U A;  2R05 A;  3S7W A;  3DJL A;  4H85 A;  1SK6 A;  2F6L A;  3D2R A;  3UU9 A;  3LGQ A;  4H81 A;  3TZ4 A;  4E01 A;  5B5W A;  3Q24 A;  3BNH A;  3TTB A;  1T9G A;  3OIB A;  4NXL A;  3HWC A;  1GJV A;  3L1T A;  4FF2 A;  5K3I A;  2OEV A;  1U8V A;  2AZE A;  2REH A;  3U33 A;  2EBF X;  2VIG A;  1FS9 A;  4FF3 A;  1LVC A;  2OEX A;  1RP3 A;  2R0N A;  3D9E A;  1K90 A;  4O5M A;  3BNJ A;  2C12 A;  3Q23 A;  1SC5 A;  4KS9 A;  4QIC A;  3FCJ A;  5K3G A;  1Y8N A;  4M9A A;  1IS2 A;  3MMO A;  4Q5C A;  3BNG A;  2JBS A;  1W07 A;  1UDY A;  4IV6 A;  1Y8P A;  1SIQ A;  2RF7 A;  2XQR B;  2BU2 A;  3LG1 A;  4AKG A;  2Q8G A;  1EGD A;  4U83 A;  3X0Y A;  1X90 A;  1RJ1 A;  4DZY A;  4P13 A;  2R02 A;  1BUC A;  3X0X A;  3MKH A;  1QDB A;  2E80 A;  2FP2 A;  2BU6 A;  5BRM A;  5M4N A;  1PK0 A;  3SWO A;  4X28 C;  1X91 A;  2FON A;  4Q17 A;  2IX6 A;  1JQI A;  4DOY A;  4N5F A;  3M9V A;  4Q0T A;  4KCF A;  4XVX A;  3C2P A;  2YYM A;  3D6B A;  3SF6 A;  4KTO A;  4FF1 A;  3NF4 A;  1RJ4 A;  2JBR A;  3D9G A;  3R7K A;  2PNR A;  3FO3 A;  4JIO A;  2FP1 A;  2E81 A;  4LQQ B;  2J7A A;  3GM6 A;  3KML A;  2EBA A;  2YGW A;  2Q8H A;  2JIF A;  2XS1 A;  4Q1O A;  3TOR A;  1UKW A;  1XFZ A;  2R03 A;  1EGC A;  3GNC A;  2WBI A;  3EON A;  4L38 A;  3SCE A;  2YYI A;  4MPN A;  1XFX A;  2CJ8 A;  2VR0 A;  4P79 A;  5EZ3 A;  1GKX A;  2YYG A;  1R2J A;  4E02 A;  2ZO5 A;  3MDE A; 
#chains in the Genus database with same CATH homology
 2R0M A;  3OWA A;  2DVL A;  3OWM A;  1IVH A;  3D9F A;  2CX9 A;  4Q5B A;  1WS9 A;  4W9U A;  3F29 A;  1SIR A;  3MXL A;  1FS8 A;  4JEK A;  1OAH A;  3D1I A;  2DDH A;  3B96 A;  1EGE A;  3PFD A;  2YYK A;  3II9 A;  4ZXV A;  4RM7 A;  2OR0 A;  4ZYJ A;  4L1F A;  3AFE A;  2UXW A;  2C0U A;  3MPJ A;  2Z1Q A;  2OT4 A;  1GU6 A;  3BNF A;  5K3H A;  2A1T A;  3P4T A;  2D29 A;  3AFF A;  2YYJ A;  3EOM A;  4OO2 A;  4L3Z A;  2RFQ A;  3MPI A;  2PG0 A;  4G5E A;  4X28 A;  4IRN A;  3MDD A;  4L3X A;  2JBT A;  4HR3 A;  3GQT A;  3UBR A;  3RKH A;  1RX0 A;  2ZAF A;  3SXQ A;  2YYL A;  4L3Y A;  1FS7 A;  5K3J A;  4WJY A;  3D9D A;  2RDZ A;  2IX5 A;  4Q4U A;  3S7W A;  3UU9 A;  3LGQ A;  3BNH A;  3TTB A;  1T9G A;  3OIB A;  4NXL A;  3HWC A;  3L1T A;  5K3I A;  1U8V A;  2REH A;  2VIG A;  1FS9 A;  2R0N A;  3D9E A;  4O5M A;  3BNJ A;  2C12 A;  3FCJ A;  5K3G A;  4M9A A;  1IS2 A;  3MMO A;  4Q5C A;  3BNG A;  2JBS A;  1W07 A;  1UDY A;  4IV6 A;  2RF7 A;  1SIQ A;  3LG1 A;  1EGD A;  4U83 A;  3X0Y A;  4P13 A;  1BUC A;  3X0X A;  3MKH A;  1QDB A;  2E80 A;  3SWO A;  4X28 C;  2FON A;  4Q17 A;  2IX6 A;  1JQI A;  4DOY A;  4N5F A;  3M9V A;  4Q0T A;  4KCF A;  4XVX A;  2YYM A;  3D6B A;  3SF6 A;  4KTO A;  3NF4 A;  2JBR A;  3D9G A;  3R7K A;  3FO3 A;  2E81 A;  2J7A A;  3GM6 A;  2EBA A;  3TOR A;  2JIF A;  4Q1O A;  1UKW A;  3SCE A;  1EGC A;  3GNC A;  2WBI A;  3EON A;  4L38 A;  2YYI A;  2VR0 A;  2YYG A;  1R2J A;  2ZO5 A;  3MDE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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