4X28A

Crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis
Total Genus 129
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
129
sequence length
399
structure length
386
Chain Sequence
MRISYTPQQEELRRELRSYFATLMTPERREALSSVNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFTDEAAIAGAPVPFLTINSVAPTIMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAGTDLANLRTTAVRDGDDYVVNGQKMWTSLIQYADYVWLAVRTNPESSGAKKHRGISVLIVPTTAEGFSWTPVHTMAGPDTSATYYSDVRVPVANRVGEENAGWKLVTNQLNHERVALVSPAPIFGCLREVREWAQNTKDAGGTRLIDSEWVQLNLARVHAKAEVLKLINWELASSQGPSPADASAAKVFGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGGGTNEVQRDIIGMVALGLPRAN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Acyl-CoA dehydrogenase
publication title Unraveling Cholesterol Catabolism in Mycobacterium tuberculosis: ChsE4-ChsE5 alpha 2 beta 2 Acyl-CoA Dehydrogenase Initiates beta-Oxidation of 3-Oxo-cholest-4-en-26-oyl CoA.
pubmed doi rcsb
source organism Mycobacterium tuberculosis (strain atcc 25618 / h37rv)
molecule tags Oxidoreductase
total genus 129
structure length 386
sequence length 399
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-11-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 4x28A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 4x28A03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 4x28A02
3OWAA 4OO2A 1JQIA 4N5FA 2EBAA 3MPIA 3S7WA 4IV6A 3SWOA 4Q17A 3GNCA 4RM7A 2YYGA 4X28C 2RDZA 1R2JA 2RFQA 2CX9A 2YYMA 4L3YA 3OWMA 1SIRA 3B96A 3R7KA 3M9VA 3PFDA 1QDBA 4L38A 1T9GA 3D9DA 1FS9A 4ZYJA 4ZXVA 2DVLA 4M9AA 3AFFA 1EGCA 3SF6A 3BNFA 1EGEA 2UXWA 3F29A 3TTBA 2ZAFA 2E81A 4Q0TA 4U83A 3L1TA 4W9UA 2IX6A 2WBIA 3EONA 3BNGA 1WS9A 2IX5A 2OR0A 2C12A 2JBTA 5K3IA 2R0MA 1UKWA 5K3HA 4Q5CA 1UDYA 1FS7A 2JBRA 3AFEA 1SIQA 3LGQA 5K3JA 2E80A 3BNJA 1IS2A 2REHA 2C0UA 2VIGA 2FONA 3NF4A 3MMOA 4WJYA 2A1TA 2R0NA 4Q5BA 3TORA 2RF7A 2Z1QA 3D6BA 4Q4UA 3MDEA 4JEKA 3UU9A 2YYLA 2VR0A 3P4TA 1RX0A 3II9A 3D9FA 3UBRA 4KCFA 3EOMA 3GQTA 3D9GA 4KTOA 4NXLA 3MPJA 4O5MA 2JIFA 4L3XA 3X0XA 1W07A 3SCEA 3MDDA 4DOYA 1IVHA 3FCJA 4XVXA 1GU6A 4IRNA 2D29A 5K3GA 4HR3A 4L3ZA 1U8VA 3X0YA 2OT4A 3BNHA 2J7AA 2DDHA 3MXLA 3FO3A 4Q1OA 2YYIA 3RKHA 3SXQA 1FS8A 2YYKA 2ZO5A 3HWCA 1OAHA 3LG1A 3GM6A 1EGDA 4G5EA 3MKHA 4L1FA 2YYJA 4P13A 3D1IA 3OIBA 4X28A 2JBSA 2PG0A 1BUCA 3D9EA
chains in the Genus database with same CATH superfamily
4G97A 3OWAA 1SC5A 2OEXA 1JQIA 4KSAA 4MP2A 4OO2A 4N5FA 3C2PA 1XG2B 2EBAA 1X91A 1XFZA 2AO2A 3MPIA 2R03A 3S7WA 5M4KA 4IV6A 1S26A 4AI6A 3SWOA 2CJ4A 4Q17A 3C3LA 3GNCA 4RM7A 2EC5A 2YYGA 4X28C 2RDZA 1R2JA 2RFQA 5M4PA 2CX9A 2YYMA 2CJ5A 4H7QA 3OWMA 4L3YA 4V25A 3Q24A 2YGWA 4QICA 2AZEA 1GKZA 2HJNA 1Y0VA 2F6LA 1SIRA 3B96A 3R7KA 3M9VA 3PFDA 1QDBA 2LFWA 1T9GA 3D9DA 1FS9A 4L38A 4MP7A 2EBFX 3TZ2A 4KS9A 1R3BA 5M4MA 4ZYJA 2BU5A 4HKSA 2E0AA 4ZXVA 2BU8A 2DVLA 4M9AA 3AFFA 1EGCA 3SF6A 2FP1A 3BNFA 1K90A 4E02A 1K93A 4F0XA 1EGEA 2UXWA 3Q23A 4AKHA 4E00A 3F29A 3VKGA 3X29A 3TTBA 1SK6A 1Y8NA 2ZDYA 2QR4A 4FF1A 2ZAFA 3TZ4A 4E01A 2E81A 2PNRA 2ZKJA 4LQSB 5B5VA 4Q0TA 4U83A 1XFUA 1RJ1A 2XQRB 4W9UA 2IX6A 2XS1A 3L1TA 2WBIA 3EONA 2ZDXA 3BNGA 3U33A 1Y8PA 1WS9A 4V26A 3CRLA 4FF2A 2IX5A 2OR0A 2C12A 5GJVE 3TZ0A 2JBTA 1XFVA 5K3IA 2VF1A 3KMLA 2R0MA 2EBHX 1UKWA 5K3HA 4Q5CA 1UDYA 2GBBA 1FS7A 2Q8FA 4MPEA 5BRMA 2PO4A 2JBRA 3AFEA 1SIQA 1JM6A 3LGQA 3D2RA 5K3JA 4HKRA 5BRKA 2Q8IA 2E80A 3BNJA 1X90A 1IS2A 2REHA 2BU2A 2BU6A 2C0UA 1X8ZA 2CJ6A 2VIGA 2FONA 3NF4A 5B6BA 3Q0AA 3Q22A 4P79A 1PI1A 3MMOA 4WJYA 2A1TA 2R0NA 4Q5BA 5GJWE 2RF7A 2Z1QA 3TORA 2FP2A 3D6BA 4Q4UA 3MDEA 5J6AA 2R02A 1GKXA 4H81A 4JEKA 3UU9A 5M4NA 2YYLA 2VR0A 2BTZA 3P4TA 2CJ8A 4AKGA 1LVCA 1RX0A 1XFWA 3II9A 3D9FA 2CJ7A 3UBRA 4MPNA 4KCFA 3EOMA 2Q8GA 1GJVA 3VADA 3GQTA 3D9GA 4KTOA 1RP3A 4NXLA 1XFYA 3MPJA 4O5MA 2JIFA 4FZ4A 4L3XA 3N0RA 3X0XA 5B5WA 4H85A 4FF3A 1W07A 3SCEA 3MDDA 4FF4A 4DOYA 2OJQA 1IVHA 4KSFA 3FCJA 4XVXA 1GU6A 4IRNA 2D29A 2Q8HA 5K3GA 1XFXA 2XS8A 4HR3A 4L3ZA 1U8VA 3X0YA 4LQQB 2OT4A 3BNHA 2J7AA 4JIZA 1Y8OA 4DZYA 2OEVA 2DDHA 3MXLA 3FO3A 4JIOA 4Q1OA 3DJLA 2YYIA 3RKHA 3SXQA 1FS8A 2YYKA 2ZO5A 3HWCA 5J71A 1OAHA 1K8TA 3LG1A 3GM6A 1EGDA 5EZ3A 3CE2A 4G5EA 4AKIA 3MKHA 3C46A 2BU7A 1RJ4A 4L1FA 3TZ5A 3VKHA 2YYJA 2R05A 4MPCA 4P13A 1PK0A 3CRKA 3OIBA 3D1IA 4J1VA 4X28A 2JBSA 2PG0A 1BUCA 3D9EA
chains in the Genus database with same CATH topology
3OWAA 4OO2A 1JQIA 4N5FA 2EBAA 3MPIA 3S7WA 4IV6A 3SWOA 4Q17A 3GNCA 4RM7A 2YYGA 4X28C 2RDZA 1R2JA 2RFQA 2CX9A 2YYMA 4L3YA 3OWMA 1SIRA 3B96A 3R7KA 3M9VA 3PFDA 1QDBA 4L38A 1T9GA 3D9DA 1FS9A 4ZYJA 4ZXVA 2DVLA 4M9AA 3AFFA 1EGCA 3SF6A 3BNFA 1EGEA 2UXWA 3F29A 3TTBA 2ZAFA 2E81A 4Q0TA 4U83A 3L1TA 4W9UA 2IX6A 2WBIA 3EONA 3BNGA 1WS9A 2IX5A 2OR0A 2C12A 2JBTA 5K3IA 2R0MA 1UKWA 5K3HA 4Q5CA 1UDYA 1FS7A 2JBRA 3AFEA 1SIQA 3LGQA 5K3JA 2E80A 3BNJA 1IS2A 2REHA 2C0UA 2VIGA 2FONA 3NF4A 3MMOA 4WJYA 2A1TA 2R0NA 4Q5BA 3TORA 2RF7A 2Z1QA 3D6BA 4Q4UA 3MDEA 4JEKA 3UU9A 2YYLA 2VR0A 3P4TA 1RX0A 3II9A 3D9FA 3UBRA 4KCFA 3EOMA 3GQTA 3D9GA 4KTOA 4NXLA 3MPJA 4O5MA 2JIFA 4L3XA 3X0XA 1W07A 3SCEA 3MDDA 4DOYA 1IVHA 3FCJA 4XVXA 1GU6A 4IRNA 2D29A 5K3GA 4HR3A 4L3ZA 1U8VA 3X0YA 2OT4A 3BNHA 2J7AA 2DDHA 3MXLA 3FO3A 4Q1OA 2YYIA 3RKHA 3SXQA 1FS8A 2YYKA 2ZO5A 3HWCA 1OAHA 3LG1A 3GM6A 1EGDA 4G5EA 3MKHA 4L1FA 2YYJA 4P13A 3D1IA 3OIBA 4X28A 2JBSA 2PG0A 1BUCA 3D9EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OWA A;  4OO2 A;  1JQI A;  4N5F A;  2EBA A;  3MPI A;  3S7W A;  4IV6 A;  3SWO A;  4Q17 A;  3GNC A;  4RM7 A;  2YYG A;  4X28 C;  2RDZ A;  1R2J A;  2RFQ A;  2CX9 A;  2YYM A;  4L3Y A;  3OWM A;  1SIR A;  3B96 A;  3R7K A;  3M9V A;  3PFD A;  1QDB A;  4L38 A;  1T9G A;  3D9D A;  1FS9 A;  4ZYJ A;  4ZXV A;  2DVL A;  4M9A A;  3AFF A;  1EGC A;  3SF6 A;  3BNF A;  1EGE A;  2UXW A;  3F29 A;  3TTB A;  2ZAF A;  2E81 A;  4Q0T A;  4U83 A;  3L1T A;  4W9U A;  2IX6 A;  2WBI A;  3EON A;  3BNG A;  1WS9 A;  2IX5 A;  2OR0 A;  2C12 A;  2JBT A;  5K3I A;  2R0M A;  1UKW A;  5K3H A;  4Q5C A;  1UDY A;  1FS7 A;  2JBR A;  3AFE A;  1SIQ A;  3LGQ A;  5K3J A;  2E80 A;  3BNJ A;  1IS2 A;  2REH A;  2C0U A;  2VIG A;  2FON A;  3NF4 A;  3MMO A;  4WJY A;  2A1T A;  2R0N A;  4Q5B A;  3TOR A;  2RF7 A;  2Z1Q A;  3D6B A;  4Q4U A;  3MDE A;  4JEK A;  3UU9 A;  2YYL A;  2VR0 A;  3P4T A;  1RX0 A;  3II9 A;  3D9F A;  3UBR A;  4KCF A;  3EOM A;  3GQT A;  3D9G A;  4KTO A;  4NXL A;  3MPJ A;  4O5M A;  2JIF A;  4L3X A;  3X0X A;  1W07 A;  3SCE A;  3MDD A;  4DOY A;  1IVH A;  3FCJ A;  4XVX A;  1GU6 A;  4IRN A;  2D29 A;  5K3G A;  4HR3 A;  4L3Z A;  1U8V A;  3X0Y A;  2OT4 A;  3BNH A;  2J7A A;  2DDH A;  3MXL A;  3FO3 A;  4Q1O A;  2YYI A;  3RKH A;  3SXQ A;  1FS8 A;  2YYK A;  2ZO5 A;  3HWC A;  1OAH A;  3LG1 A;  3GM6 A;  1EGD A;  4G5E A;  3MKH A;  4L1F A;  2YYJ A;  4P13 A;  3D1I A;  3OIB A;  4X28 A;  2JBS A;  2PG0 A;  1BUC A;  3D9E A; 
#chains in the Genus database with same CATH topology
 4G97 A;  3OWA A;  1SC5 A;  2OEX A;  1JQI A;  4KSA A;  4MP2 A;  4OO2 A;  4N5F A;  3C2P A;  1XG2 B;  2EBA A;  1X91 A;  1XFZ A;  2AO2 A;  3MPI A;  2R03 A;  3S7W A;  5M4K A;  4IV6 A;  1S26 A;  4AI6 A;  3SWO A;  2CJ4 A;  4Q17 A;  3C3L A;  3GNC A;  4RM7 A;  2EC5 A;  2YYG A;  4X28 C;  2RDZ A;  1R2J A;  2RFQ A;  5M4P A;  2CX9 A;  2YYM A;  2CJ5 A;  4H7Q A;  3OWM A;  4L3Y A;  4V25 A;  3Q24 A;  2YGW A;  4QIC A;  2AZE A;  1GKZ A;  2HJN A;  1Y0V A;  2F6L A;  1SIR A;  3B96 A;  3R7K A;  3M9V A;  3PFD A;  1QDB A;  2LFW A;  1T9G A;  3D9D A;  1FS9 A;  4L38 A;  4MP7 A;  2EBF X;  3TZ2 A;  4KS9 A;  1R3B A;  5M4M A;  4ZYJ A;  2BU5 A;  4HKS A;  2E0A A;  4ZXV A;  2BU8 A;  2DVL A;  4M9A A;  3AFF A;  1EGC A;  3SF6 A;  2FP1 A;  3BNF A;  1K90 A;  4E02 A;  1K93 A;  4F0X A;  1EGE A;  2UXW A;  3Q23 A;  4AKH A;  4E00 A;  3F29 A;  3VKG A;  3X29 A;  3TTB A;  1SK6 A;  1Y8N A;  2ZDY A;  2QR4 A;  4FF1 A;  2ZAF A;  3TZ4 A;  4E01 A;  2E81 A;  2PNR A;  2ZKJ A;  4LQS B;  5B5V A;  4Q0T A;  4U83 A;  1XFU A;  1RJ1 A;  2XQR B;  4W9U A;  2IX6 A;  2XS1 A;  3L1T A;  2WBI A;  3EON A;  2ZDX A;  3BNG A;  3U33 A;  1Y8P A;  1WS9 A;  4V26 A;  3CRL A;  4FF2 A;  2IX5 A;  2OR0 A;  2C12 A;  5GJV E;  3TZ0 A;  2JBT A;  1XFV A;  5K3I A;  2VF1 A;  3KML A;  2R0M A;  2EBH X;  1UKW A;  5K3H A;  4Q5C A;  1UDY A;  2GBB A;  1FS7 A;  2Q8F A;  4MPE A;  5BRM A;  2PO4 A;  2JBR A;  3AFE A;  1SIQ A;  1JM6 A;  3LGQ A;  3D2R A;  5K3J A;  4HKR A;  5BRK A;  2Q8I A;  2E80 A;  3BNJ A;  1X90 A;  1IS2 A;  2REH A;  2BU2 A;  2BU6 A;  2C0U A;  1X8Z A;  2CJ6 A;  2VIG A;  2FON A;  3NF4 A;  5B6B A;  3Q0A A;  3Q22 A;  4P79 A;  1PI1 A;  3MMO A;  4WJY A;  2A1T A;  2R0N A;  4Q5B A;  5GJW E;  2RF7 A;  2Z1Q A;  3TOR A;  2FP2 A;  3D6B A;  4Q4U A;  3MDE A;  5J6A A;  2R02 A;  1GKX A;  4H81 A;  4JEK A;  3UU9 A;  5M4N A;  2YYL A;  2VR0 A;  2BTZ A;  3P4T A;  2CJ8 A;  4AKG A;  1LVC A;  1RX0 A;  1XFW A;  3II9 A;  3D9F A;  2CJ7 A;  3UBR A;  4MPN A;  4KCF A;  3EOM A;  2Q8G A;  1GJV A;  3VAD A;  3GQT A;  3D9G A;  4KTO A;  1RP3 A;  4NXL A;  1XFY A;  3MPJ A;  4O5M A;  2JIF A;  4FZ4 A;  4L3X A;  3N0R A;  3X0X A;  5B5W A;  4H85 A;  4FF3 A;  1W07 A;  3SCE A;  3MDD A;  4FF4 A;  4DOY A;  2OJQ A;  1IVH A;  4KSF A;  3FCJ A;  4XVX A;  1GU6 A;  4IRN A;  2D29 A;  2Q8H A;  5K3G A;  1XFX A;  2XS8 A;  4HR3 A;  4L3Z A;  1U8V A;  3X0Y A;  4LQQ B;  2OT4 A;  3BNH A;  2J7A A;  4JIZ A;  1Y8O A;  4DZY A;  2OEV A;  2DDH A;  3MXL A;  3FO3 A;  4JIO A;  4Q1O A;  3DJL A;  2YYI A;  3RKH A;  3SXQ A;  1FS8 A;  2YYK A;  2ZO5 A;  3HWC A;  5J71 A;  1OAH A;  1K8T A;  3LG1 A;  3GM6 A;  1EGD A;  5EZ3 A;  3CE2 A;  4G5E A;  4AKI A;  3MKH A;  3C46 A;  2BU7 A;  1RJ4 A;  4L1F A;  3TZ5 A;  3VKH A;  2YYJ A;  2R05 A;  4MPC A;  4P13 A;  1PK0 A;  3CRK A;  3OIB A;  3D1I A;  4J1V A;  4X28 A;  2JBS A;  2PG0 A;  1BUC A;  3D9E A; 
#chains in the Genus database with same CATH homology
 3OWA A;  4OO2 A;  1JQI A;  4N5F A;  2EBA A;  3MPI A;  3S7W A;  4IV6 A;  3SWO A;  4Q17 A;  3GNC A;  4RM7 A;  2YYG A;  4X28 C;  2RDZ A;  1R2J A;  2RFQ A;  2CX9 A;  2YYM A;  4L3Y A;  3OWM A;  1SIR A;  3B96 A;  3R7K A;  3M9V A;  3PFD A;  1QDB A;  4L38 A;  1T9G A;  3D9D A;  1FS9 A;  4ZYJ A;  4ZXV A;  2DVL A;  4M9A A;  3AFF A;  1EGC A;  3SF6 A;  3BNF A;  1EGE A;  2UXW A;  3F29 A;  3TTB A;  2ZAF A;  2E81 A;  4Q0T A;  4U83 A;  3L1T A;  4W9U A;  2IX6 A;  2WBI A;  3EON A;  3BNG A;  1WS9 A;  2IX5 A;  2OR0 A;  2C12 A;  2JBT A;  5K3I A;  2R0M A;  1UKW A;  5K3H A;  4Q5C A;  1UDY A;  1FS7 A;  2JBR A;  3AFE A;  1SIQ A;  3LGQ A;  5K3J A;  2E80 A;  3BNJ A;  1IS2 A;  2REH A;  2C0U A;  2VIG A;  2FON A;  3NF4 A;  3MMO A;  4WJY A;  2A1T A;  2R0N A;  4Q5B A;  3TOR A;  2RF7 A;  2Z1Q A;  3D6B A;  4Q4U A;  3MDE A;  4JEK A;  3UU9 A;  2YYL A;  2VR0 A;  3P4T A;  1RX0 A;  3II9 A;  3D9F A;  3UBR A;  4KCF A;  3EOM A;  3GQT A;  3D9G A;  4KTO A;  4NXL A;  3MPJ A;  4O5M A;  2JIF A;  4L3X A;  3X0X A;  1W07 A;  3SCE A;  3MDD A;  4DOY A;  1IVH A;  3FCJ A;  4XVX A;  1GU6 A;  4IRN A;  2D29 A;  5K3G A;  4HR3 A;  4L3Z A;  1U8V A;  3X0Y A;  2OT4 A;  3BNH A;  2J7A A;  2DDH A;  3MXL A;  3FO3 A;  4Q1O A;  2YYI A;  3RKH A;  3SXQ A;  1FS8 A;  2YYK A;  2ZO5 A;  3HWC A;  1OAH A;  3LG1 A;  3GM6 A;  1EGD A;  4G5E A;  3MKH A;  4L1F A;  2YYJ A;  4P13 A;  3D1I A;  3OIB A;  4X28 A;  2JBS A;  2PG0 A;  1BUC A;  3D9E A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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